Citrus Sinensis ID: 015532

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEccccccccEEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccccccccccccccccccccccccEEEEEccccccccccccEEEccccccccEEEEcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccHHHHHHHccccccHHHcccccccccHHHHHHHHHHcccccccccHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEcccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEEEccEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHccccHHHHccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccccccccccccccccccccEEEEEcccccccccccEEcccccccccHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHcHHHHHHHHHccccccccccccccccccccccccccccHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHcccccccccccccccc
Coil and Loop (DISEMBL)
metqriiefphknmdkrprkrprltwdvppplpppkvlpalycvqefgnggmpnyacssmfygaiprtgsppwrpddkdghyVFAIGENLTPRYRILskmgegtfgqVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARhdiggtryrsfPIDLVRELGRQLLESVAFMHELRLIhtdlkpenILLVSAeyvkvpdykflsrsskdgsyfknlpkssaiklidfgsttfehqdhsyvvstrhyrapevilglgwnypcdlwsvGCILVELCSGEALFQTHENLEHLAMMERVlgplphhmvIRADRRAEKYFRrgarldwpdgatsrdSMRAVWKLLrlpnlimqhVDHSAGDLIDLLQGLLRYDPAERLKAREalrhpfftrdvrrptllvatget
Flexible Loop (DISEMBL)
metqriiefphknmdkrprkrprltwdvppplpppkVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIhtdlkpenILLVSAEYVKVPDYKFlsrsskdgsyfknlpkssAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRgarldwpdgatsrdSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKArealrhpfftrdvrrptllvatget
Low Complexity Region (SEG)
METQRIIEFPHKNMDKRPRKRPRLTWDvppplpppkvlpALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Disordered region (IsUnstruct)
***********************************KVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS**DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL******
Disordered Region (DISOPRED)
**********************************************F****************************DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF*************LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR*******************************HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT***************
Disordered Region (DISEMBL)
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Disordered Region (DISPRO)
************************TWDVPPPL**************FGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	405	2.2.26 [Sep-21-2011]
P51566	467	Serine/threonine-protein	yes	no	0.965	0.837	0.759	0.0
P51567	427	Serine/threonine-protein	no	no	0.953	0.903	0.641	1e-158
P51568	400	Serine/threonine-protein	no	no	0.879	0.89	0.575	1e-128
Q10156	690	Dual specificity protein	yes	no	0.758	0.444	0.418	5e-77
O35491	499	Dual specificity protein	yes	no	0.743	0.603	0.425	1e-72
P49760	499	Dual specificity protein	yes	no	0.745	0.605	0.424	2e-72
P49762	832	Serine/threonine-protein	no	no	0.750	0.365	0.416	9e-71
Q3SX21	490	Dual specificity protein	no	no	0.738	0.610	0.411	4e-69
Q63117	490	Dual specificity protein	no	no	0.743	0.614	0.408	6e-69
P49761	638	Dual specificity protein	no	no	0.743	0.471	0.408	7e-69

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/429 (75%), Positives = 361/429 (84%), Gaps = 38/429 (8%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY+ILSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------------- 154
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+R                     
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 202
                       YRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 262
           PDYKFLSR +KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GW
Sbjct: 257 PDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGW 316

Query: 263 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
           NYPCDLWS+GCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRR
Sbjct: 317 NYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRR 376

Query: 323 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 382
           GA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KARE
Sbjct: 377 GAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKARE 436

Query: 383 ALRHPFFTR 391
           AL HPFFTR
Sbjct: 437 ALNHPFFTR 445

Activator of yeast transcription factor, STE12.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  559 bits (1441), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 276/430 (64%), Positives = 330/430 (76%), Gaps = 44/430 (10%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGN------GGMPN 54
           ME +R+ EFPH +MD+RPRKR RL WDV P     +V   ++C QE GN       G P+
Sbjct: 1   MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQV--GMFCGQEIGNISSFASSGAPS 58

Query: 55  YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDN 114
              SS+    + R GSPPWR DDKDGHY+F +G++LTPRY+I SKMGEGTFGQV+EC+D 
Sbjct: 59  DNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDR 118

Query: 115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------- 154
           E+KE+VA+KIVR + KYREAAMIEI++LQ+L +HD GG R                    
Sbjct: 119 ERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 178

Query: 155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 201
                        YRSFPIDLVRE+G QLLE VAFMH+LR+IHTDLKPENILLVS++YVK
Sbjct: 179 LGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVK 238

Query: 202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG 261
           +P+YK  SR  +D  Y K +PKSSAIK+IDFGSTT+E QD +Y+VSTRHYRAPEVILGLG
Sbjct: 239 IPEYKG-SRLQRDVCY-KRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLG 296

Query: 262 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR 321
           W+YPCD+WSVGCI+VELC+GEALFQTHENLEHLAMMERVLGP P  M+ + DR +EKY R
Sbjct: 297 WSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVR 356

Query: 322 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR 381
           RG RLDWPDGATSRDS++AV KL RL NLIMQHVDHSAG+LI+++QGLLR+DP+ER+ AR
Sbjct: 357 RG-RLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAR 415

Query: 382 EALRHPFFTR 391
           EALRHPFF R
Sbjct: 416 EALRHPFFAR 425

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  457 bits (1175), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/412 (57%), Positives = 291/412 (70%), Gaps = 56/412 (13%)

Query: 12  KNMDK-RPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGS 70
           ++MDK R RKRPR+TWD  P  P  K       ++  G+ G               R  S
Sbjct: 7   ESMDKERVRKRPRMTWDEAPAEPEAKRA----VIKGHGSDG---------------RILS 47

Query: 71  PPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK 130
           PP R DD+DGHYVF++ +NLTPRY+ILSKMGEGTFG+V+EC+D + KE VAIKI+RSI K
Sbjct: 48  PPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKK 107

Query: 131 YREAAMIEIDVLQRLARHDIGGTR---------------------------------YRS 157
           YR+AAMIEIDVLQ+L + D G TR                                 Y +
Sbjct: 108 YRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSA 167

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           FP+ LVR+ G QLLESVA+MHEL+L+HTDLKPENILLVS+E VK+PD K   RS+ + ++
Sbjct: 168 FPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNK---RSAANETH 224

Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
           F+ LPKSSAIKLIDFGST  +++ H  +V TRHYR+PEVILGLGW+Y CDLWS+GCIL E
Sbjct: 225 FRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFE 284

Query: 278 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 337
           LC+GEALFQTH+NLEHLAMMER LGPLP HM  +A R AEKYFRRG RL+WP+GA SR+S
Sbjct: 285 LCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRES 344

Query: 338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           +RAV +L RL +++ +HVD++     DLL GLL YDP+ERL A EAL HPFF
Sbjct: 345 IRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPFF 396

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  288 bits (737), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 148/354 (41%), Positives = 210/354 (59%), Gaps = 47/354 (13%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD DGHY          RY ++  +G GTFG+V++C+D       AIK+ R+I KYREA+
Sbjct: 344 DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREAS 403

Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
           +IE+ VLQ +A  D                                  +    Y  FP+ 
Sbjct: 404 LIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLK 463

Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKFLSRSSKDGSYFK 219
            ++ L +QL +SVAF+H L L+HTDLKPEN+LLVS  +  +++P Y+         +Y +
Sbjct: 464 HIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVSNASRTIRLP-YR---------NYSQ 513

Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
            +  S  I+LIDFGS TFE + HS VVSTRHYRAPE+ILGLGW+YPCD+WS+GCILVEL 
Sbjct: 514 KVLNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELF 573

Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           +G+ALFQTHE+ EHL MME++LGP   +M+ R+ R ++++F+   ++ +P   T + S+ 
Sbjct: 574 TGQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSIN 633

Query: 340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
            +  L  L   I          L+DLL+ +  YDP  R+ A+EAL HPFFT+ +
Sbjct: 634 YLQSLQTL-EQIFAVSSPEVALLLDLLKKVFVYDPKRRITAKEALWHPFFTQPI 686

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  273 bits (699), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 214/350 (61%), Gaps = 49/350 (14%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 144 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKEA 203

Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    Y  +PI
Sbjct: 204 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 263

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y    +   L +   + S    
Sbjct: 264 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERS---- 316

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct: 317 -VKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 375

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R 
Sbjct: 376 GFTLFQTHDNREHLAMMERILGPVPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 432

Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             K LR   L  +  DH    L DL++ +L Y+PA+RL   EAL+HPFF 
Sbjct: 433 NCKPLR-RYLTSEAEDHHQ--LFDLIENMLEYEPAKRLTLGEALQHPFFA 479

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  273 bits (698), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/351 (42%), Positives = 215/351 (61%), Gaps = 49/351 (13%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    Y  +PI
Sbjct: 205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y    +   L +   + S    
Sbjct: 265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERS---- 317

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct: 318 -VKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R 
Sbjct: 377 GFTLFQTHDNREHLAMMERILGPIPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 433

Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
             K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct: 434 NCKPLR-RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  267 bits (683), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 147/353 (41%), Positives = 210/353 (59%), Gaps = 49/353 (13%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD DGH ++  G+ L  RY+I++ +GEGTFG+VV+  D E+   +A+KI++++ KYREAA
Sbjct: 461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAA 520

Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
            +EI+ L+++A+ D                                  +    Y  +P+D
Sbjct: 521 KLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD 580

Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
            VR +  QL  SV F+H+ RL HTDLKPENIL V ++Y    ++K ++R  +        
Sbjct: 581 QVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHK-INREVRRV------ 633

Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            K++ ++LIDFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL EL  G
Sbjct: 634 -KNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLG 692

Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMV---IRADRRAEKYFRRGARLDWPDGATSRDSM 338
             LFQTH+N EHLAMMER+LG +P+ M        +   KYF  G +LDW + +++   +
Sbjct: 693 ITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHG-KLDWDEKSSAGRYV 751

Query: 339 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           R   K L L  L     DH   +L  L++ +L Y+P+ R+   EAL HPFF R
Sbjct: 752 RDHCKPLFLCQL-SDSEDHC--ELFSLIKKMLEYEPSSRITLGEALHHPFFDR 801

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q3SX21|CLK3_BOVIN Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1

 Score =  262 bits (669), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 145/352 (41%), Positives = 211/352 (59%), Gaps = 53/352 (15%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 197

Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    ++ +P+
Sbjct: 198 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 257

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 258 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYN---EHKSCEEKSV--- 311

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 312 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 369

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 370 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 426

Query: 341 VWKLLRLPNL--IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             K L+   L   ++HV      L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 427 NCKPLKSYMLQDTLEHV-----QLFDLMRRMLEFDPAQRITLAEALLHPFFA 473

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q63117|CLK3_RAT Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2

 Score =  261 bits (667), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 197

Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    ++ +P+
Sbjct: 198 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 257

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 258 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYN---EHKSCEEKSV--- 311

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 312 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 369

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 370 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 426

Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 427 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 473

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49761|CLK3_HUMAN Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3

 Score =  261 bits (667), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 286 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 345

Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    ++ +P+
Sbjct: 346 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 405

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 406 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH---KSCEEKSV--- 459

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 460 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 517

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 518 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 574

Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 575 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 621

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
225439856	429	PREDICTED: serine/threonine-protein kina	0.965	0.911	0.820	0.0
147800314	448	hypothetical protein VITISV_001943 [Viti	0.960	0.868	0.819	0.0
224138498	433	predicted protein [Populus trichocarpa]	0.960	0.898	0.806	0.0
449439982	428	PREDICTED: serine/threonine-protein kina	0.975	0.922	0.810	0.0
449439980	433	PREDICTED: serine/threonine-protein kina	0.975	0.912	0.810	0.0
356505140	427	PREDICTED: serine/threonine-protein kina	0.958	0.908	0.771	0.0
356505138	444	PREDICTED: serine/threonine-protein kina	0.975	0.889	0.760	0.0
255638456	444	unknown [Glycine max]	0.975	0.889	0.756	0.0
15231839	467	serine/threonine-protein kinase AFC1 [Ar	0.965	0.837	0.759	0.0
601787	467	protein kinase [Arabidopsis thaliana]	0.965	0.837	0.757	0.0

>gi|225439856|ref|XP_002278124.1| PREDICTED: serine/threonine-protein kinase AFC1 [Vitis vinifera] gi|297741539|emb|CBI32671.3| unnamed protein product [Vitis vinifera]

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/428 (82%), Positives = 376/428 (87%), Gaps = 37/428 (8%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRI EFPHKNMDKRPRKRPRLTWD+PPPLPPPKV+P +YC QEF    + NY  SS+
Sbjct: 1   METQRITEFPHKNMDKRPRKRPRLTWDMPPPLPPPKVVPGMYCSQEF----VSNYPYSSL 56

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           FY  + R GSPPWRPDDKDGHY+FAIGENLTPRYRI+SKMGEGTFGQV+ECFDN+KKE+V
Sbjct: 57  FYKGVTRNGSPPWRPDDKDGHYIFAIGENLTPRYRIISKMGEGTFGQVLECFDNDKKEVV 116

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------------- 154
           AIKIVRSI+KYREAAMIEIDVLQ+LARHD+GGTR                          
Sbjct: 117 AIKIVRSIHKYREAAMIEIDVLQKLARHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 176

Query: 155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 207
                  YRSFPIDLVRELGRQLLESVAFMH+LRLIHTDLKPENILLVS++Y+KVPDYKF
Sbjct: 177 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKF 236

Query: 208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 267
           LSR+ KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+YVVSTRHYRAPEVILGLGWNYPCD
Sbjct: 237 LSRTIKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYPCD 296

Query: 268 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 327
           LWSVGCIL+ELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYFRRGARLD
Sbjct: 297 LWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPQHMVLRADRRAEKYFRRGARLD 356

Query: 328 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 387
           WP+GATSR+SMRAVWKL RL NL+MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP
Sbjct: 357 WPEGATSRESMRAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 416

Query: 388 FFTRDVRR 395
           FFTRD RR
Sbjct: 417 FFTRDARR 424

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800314|emb|CAN73108.1| hypothetical protein VITISV_001943 [Vitis vinifera]

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/426 (81%), Positives = 375/426 (88%), Gaps = 37/426 (8%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRI EFPHKNMDKRPRKRPRLTWD+PPPLPPPKV+P +YC QEF    + NY  SS+
Sbjct: 1   METQRITEFPHKNMDKRPRKRPRLTWDMPPPLPPPKVVPGMYCSQEF----VSNYPYSSL 56

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           FY  + R GSPPWRPDDKDGHY+FAIGENLTPRYRI+SKMGEGTFGQV+ECFDN+KKE+V
Sbjct: 57  FYKGVTRNGSPPWRPDDKDGHYIFAIGENLTPRYRIISKMGEGTFGQVLECFDNDKKEVV 116

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------------- 154
           AIKIVRSI+KYREAAMIEIDVLQ+LARHD+GGTR                          
Sbjct: 117 AIKIVRSIHKYREAAMIEIDVLQKLARHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 176

Query: 155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 207
                  YRSFPIDLVRELGRQLLESVAFMH+LRLIHTDLKPENILLVS++Y+KVPDYKF
Sbjct: 177 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKF 236

Query: 208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 267
           LSR+ KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+YVVSTRHYRAPEVILGLGWNYPCD
Sbjct: 237 LSRTIKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYPCD 296

Query: 268 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 327
           LWSVGCIL+ELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYFRRGARLD
Sbjct: 297 LWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPQHMVLRADRRAEKYFRRGARLD 356

Query: 328 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 387
           WP+GATSR+SMRAVWKL RL NL+MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP
Sbjct: 357 WPEGATSRESMRAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 416

Query: 388 FFTRDV 393
           FFTRD+
Sbjct: 417 FFTRDI 422

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138498|ref|XP_002322829.1| predicted protein [Populus trichocarpa] gi|222867459|gb|EEF04590.1| predicted protein [Populus trichocarpa]

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/434 (80%), Positives = 372/434 (85%), Gaps = 45/434 (10%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPP----LPPPKVLPALYCVQEFGNGG--MPN 54
           METQRI EFPHKNMDKRPRKR RLTWD+PPP    L P KV+P ++C QEFGNG   +PN
Sbjct: 1   METQRITEFPHKNMDKRPRKRQRLTWDIPPPPPPFLAPAKVVPGMFCGQEFGNGNGVIPN 60

Query: 55  YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDN 114
           Y    +FY    R GSPPWRPDDKDGHYVFAIG+NLTPRYRILSKMGEGTFGQV+ECFDN
Sbjct: 61  YG---LFYN---RNGSPPWRPDDKDGHYVFAIGDNLTPRYRILSKMGEGTFGQVLECFDN 114

Query: 115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------- 154
           EKKELVAIKIVRSI+KYREAAM EIDVLQRLARHDIG TR                    
Sbjct: 115 EKKELVAIKIVRSIHKYREAAMTEIDVLQRLARHDIGSTRCVQIRNWFDYRNHICIVFEK 174

Query: 155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 201
                        YRSFPIDLVRELGRQLLESVAFMH+L LIHTDLKPENILLVS+EY+K
Sbjct: 175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLHLIHTDLKPENILLVSSEYIK 234

Query: 202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG 261
           VPDYKFLSRS+KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG
Sbjct: 235 VPDYKFLSRSTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG 294

Query: 262 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR 321
           WNYPCD+WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYFR
Sbjct: 295 WNYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMVVRADRRAEKYFR 354

Query: 322 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR 381
           RG RLDWP+GATSR+SM+AV KL RLPNLIMQHVDHSAG+LIDLLQGLLR+DPAERLKAR
Sbjct: 355 RGMRLDWPEGATSRESMKAVMKLPRLPNLIMQHVDHSAGELIDLLQGLLRHDPAERLKAR 414

Query: 382 EALRHPFFTRDVRR 395
           EALRHPFF+RD+RR
Sbjct: 415 EALRHPFFSRDLRR 428

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439982|ref|XP_004137764.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 2 [Cucumis sativus]

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/428 (81%), Positives = 370/428 (86%), Gaps = 33/428 (7%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPHKNMDKRPRKR RL WD+PPP+PPPKVLP  YC QEFGNG +PNYA  SM
Sbjct: 1   METQRIIEFPHKNMDKRPRKRQRLAWDMPPPVPPPKVLPPPYCGQEFGNGQVPNYAYPSM 60

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           +    PR GSPPWRPD+KDGHYVF+IGE LTPRY ILSKMGEGTFGQV+EC D+EKKE+V
Sbjct: 61  YCRGAPRVGSPPWRPDNKDGHYVFSIGECLTPRYTILSKMGEGTFGQVLECLDSEKKEVV 120

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------------- 154
           AIKIVRSI+KYREAAMIEIDVLQRLARHDIGGTR                          
Sbjct: 121 AIKIVRSISKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180

Query: 155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 207
                  YRSFPIDLVRE  RQLLESVAFMHELRLIHTDLKPENILLVS+E+++VPD+KF
Sbjct: 181 DFLRKNSYRSFPIDLVREFARQLLESVAFMHELRLIHTDLKPENILLVSSEFIRVPDHKF 240

Query: 208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 267
           LSRS KDGSYFKNLPKS+AIKLIDFGSTT EHQDHSY+VSTRHYRAPEVILGLGWNYPCD
Sbjct: 241 LSRSVKDGSYFKNLPKSAAIKLIDFGSTTTEHQDHSYIVSTRHYRAPEVILGLGWNYPCD 300

Query: 268 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 327
           LWSVGCILVELCSGEALFQTHENLEHLAMME+VLGPLP HMV+RADRRAEKYFRRG +LD
Sbjct: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPQHMVLRADRRAEKYFRRGMQLD 360

Query: 328 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 387
           WP  ATSR+SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ERL AREALRHP
Sbjct: 361 WPQSATSRESMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLMAREALRHP 420

Query: 388 FFTRDVRR 395
           FFTRD+RR
Sbjct: 421 FFTRDLRR 428

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439980|ref|XP_004137763.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 1 [Cucumis sativus]

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/428 (81%), Positives = 370/428 (86%), Gaps = 33/428 (7%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPHKNMDKRPRKR RL WD+PPP+PPPKVLP  YC QEFGNG +PNYA  SM
Sbjct: 1   METQRIIEFPHKNMDKRPRKRQRLAWDMPPPVPPPKVLPPPYCGQEFGNGQVPNYAYPSM 60

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           +    PR GSPPWRPD+KDGHYVF+IGE LTPRY ILSKMGEGTFGQV+EC D+EKKE+V
Sbjct: 61  YCRGAPRVGSPPWRPDNKDGHYVFSIGECLTPRYTILSKMGEGTFGQVLECLDSEKKEVV 120

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------------- 154
           AIKIVRSI+KYREAAMIEIDVLQRLARHDIGGTR                          
Sbjct: 121 AIKIVRSISKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180

Query: 155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 207
                  YRSFPIDLVRE  RQLLESVAFMHELRLIHTDLKPENILLVS+E+++VPD+KF
Sbjct: 181 DFLRKNSYRSFPIDLVREFARQLLESVAFMHELRLIHTDLKPENILLVSSEFIRVPDHKF 240

Query: 208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 267
           LSRS KDGSYFKNLPKS+AIKLIDFGSTT EHQDHSY+VSTRHYRAPEVILGLGWNYPCD
Sbjct: 241 LSRSVKDGSYFKNLPKSAAIKLIDFGSTTTEHQDHSYIVSTRHYRAPEVILGLGWNYPCD 300

Query: 268 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 327
           LWSVGCILVELCSGEALFQTHENLEHLAMME+VLGPLP HMV+RADRRAEKYFRRG +LD
Sbjct: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPQHMVLRADRRAEKYFRRGMQLD 360

Query: 328 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 387
           WP  ATSR+SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ERL AREALRHP
Sbjct: 361 WPQSATSRESMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLMAREALRHP 420

Query: 388 FFTRDVRR 395
           FFTRD+RR
Sbjct: 421 FFTRDLRR 428

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505140|ref|XP_003521350.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 2 [Glycine max]

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/429 (77%), Positives = 362/429 (84%), Gaps = 41/429 (9%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPH+NMDKRPRK+ RLTWD+        VLP +YC QE GNG +PN+A  S+
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDM-------HVLPTMYCKQEVGNGVVPNHAYPSL 53

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           FY  +PR GSPPWRPDDKDGHYVFA+GENLTPRY+ILSKMGEGTFGQV+EC DNEK+E+V
Sbjct: 54  FYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLECLDNEKEEIV 113

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------------- 154
           AIK+VRSINKYREAA  EI+VL RLARHD+ G                            
Sbjct: 114 AIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICIVFEKLGPSLY 173

Query: 155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 207
                  YRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+E++KVPDYKF
Sbjct: 174 DFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISSEFIKVPDYKF 233

Query: 208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 267
           LSR++KDGSYFKNLPKSSAIKLIDFGST+FEHQDHSYVVSTRHYRAPEVILGLGWNYPCD
Sbjct: 234 LSRNTKDGSYFKNLPKSSAIKLIDFGSTSFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 293

Query: 268 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 327
           LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYF+RG RL 
Sbjct: 294 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRAEKYFKRGTRLS 353

Query: 328 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 387
           WPD +TSR+SMRAVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ERLKA+EALRHP
Sbjct: 354 WPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLKAKEALRHP 413

Query: 388 -FFTRDVRR 395
            FFTRD +R
Sbjct: 414 FFFTRDTKR 422

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505138|ref|XP_003521349.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 1 [Glycine max]

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/439 (76%), Positives = 366/439 (83%), Gaps = 44/439 (10%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDV----------PPPLPPPKVLPALYCVQEFGNG 50
           METQRIIEFPH+NMDKRPRK+ RLTWD+          P P P  +VLP +YC QE GNG
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDMHVPPPPPPPPPLPPPKLQVLPTMYCKQEVGNG 60

Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE 110
            +PN+A  S+FY  +PR GSPPWRPDDKDGHYVFA+GENLTPRY+ILSKMGEGTFGQV+E
Sbjct: 61  VVPNHAYPSLFYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLE 120

Query: 111 CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------- 154
           C DNEK+E+VAIK+VRSINKYREAA  EI+VL RLARHD+ G                  
Sbjct: 121 CLDNEKEEIVAIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICI 180

Query: 155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA 197
                            YRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+
Sbjct: 181 VFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISS 240

Query: 198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI 257
           E++KVPDYKFLSR++KDGSYFKNLPKSSAIKLIDFGST+FEHQDHSYVVSTRHYRAPEVI
Sbjct: 241 EFIKVPDYKFLSRNTKDGSYFKNLPKSSAIKLIDFGSTSFEHQDHSYVVSTRHYRAPEVI 300

Query: 258 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 317
           LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAE
Sbjct: 301 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRAE 360

Query: 318 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER 377
           KYF+RG RL WPD +TSR+SMRAVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ER
Sbjct: 361 KYFKRGTRLSWPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSER 420

Query: 378 LKAREALRHP-FFTRDVRR 395
           LKA+EALRHP FFTRD +R
Sbjct: 421 LKAKEALRHPFFFTRDTKR 439

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638456|gb|ACU19537.1| unknown [Glycine max]

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/439 (75%), Positives = 364/439 (82%), Gaps = 44/439 (10%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDV----------PPPLPPPKVLPALYCVQEFGNG 50
           METQRIIEFPH+NMDKRPRK+ RLTWD+          P P P  +VLP +YC QE GNG
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDMHVPPPPPPPPPLPPPKLQVLPTMYCKQEVGNG 60

Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE 110
            +PN+A  S+FY  +PR GSPPWRPDDKDGHYVFA+GENLTPRY+ILSKMGEGTFGQV+E
Sbjct: 61  VVPNHAYPSLFYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLE 120

Query: 111 CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------- 154
           C DNEK+E+VAIK+VRSINKYREAA  EI+VL RLARHD+ G                  
Sbjct: 121 CLDNEKEEIVAIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICI 180

Query: 155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA 197
                            YRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+
Sbjct: 181 VFEKLGPSLYDFLRKNCYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISS 240

Query: 198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI 257
           E++KVPDYKFLSR++KDGSYFKNLPKSSAIKLIDFGST+FEHQDHSYVVSTRHYRAPEVI
Sbjct: 241 EFIKVPDYKFLSRNTKDGSYFKNLPKSSAIKLIDFGSTSFEHQDHSYVVSTRHYRAPEVI 300

Query: 258 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 317
           LGLGWNYPCDLWSVGCILVELCSGEALFQTHENL HLAMMERVLGPLP HMV+RADRRAE
Sbjct: 301 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLGHLAMMERVLGPLPPHMVVRADRRAE 360

Query: 318 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER 377
           KYF+RG RL WPD +TSR+SMRAVWKL RLPNLIMQHVDH AGDLIDLLQGLLRYDP+ER
Sbjct: 361 KYFKRGTRLSWPDSSTSRESMRAVWKLPRLPNLIMQHVDHFAGDLIDLLQGLLRYDPSER 420

Query: 378 LKAREALRHP-FFTRDVRR 395
           LKA+EALRHP FFTRD +R
Sbjct: 421 LKAKEALRHPFFFTRDTKR 439

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231839|ref|NP_190925.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|42570490|ref|NP_850695.2| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|79314891|ref|NP_001030853.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|26454604|sp|P51566.2|AFC1_ARATH RecName: Full=Serine/threonine-protein kinase AFC1 gi|642132|dbj|BAA08215.1| protein kinase [Arabidopsis thaliana] gi|6729508|emb|CAB67664.1| protein kinase (AME2/AFC1) [Arabidopsis thaliana] gi|222424132|dbj|BAH20025.1| AT3G53570 [Arabidopsis thaliana] gi|332645589|gb|AEE79110.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|332645590|gb|AEE79111.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|332645591|gb|AEE79112.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana]

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/429 (75%), Positives = 361/429 (84%), Gaps = 38/429 (8%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY+ILSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------------- 154
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+R                     
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 202
                       YRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 262
           PDYKFLSR +KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GW
Sbjct: 257 PDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGW 316

Query: 263 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
           NYPCDLWS+GCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRR
Sbjct: 317 NYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRR 376

Query: 323 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 382
           GA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KARE
Sbjct: 377 GAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKARE 436

Query: 383 ALRHPFFTR 391
           AL HPFFTR
Sbjct: 437 ALNHPFFTR 445

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|601787|gb|AAA57117.1| protein kinase [Arabidopsis thaliana]

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/429 (75%), Positives = 361/429 (84%), Gaps = 38/429 (8%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY++LSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQMLSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------------- 154
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+R                     
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 202
                       YRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 262
           PDYKFLSR +KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GW
Sbjct: 257 PDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGW 316

Query: 263 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
           NYPCDLWS+GCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRR
Sbjct: 317 NYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRR 376

Query: 323 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 382
           GA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KARE
Sbjct: 377 GAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKARE 436

Query: 383 ALRHPFFTR 391
           AL HPFFTR
Sbjct: 437 ALNHPFFTR 445

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.651	0.618	0.704	6.7e-147
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.575	0.582	0.669	8.2e-122
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.585	0.507	0.907	1.8e-119
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.550	0.446	0.497	2e-73
UNIPROTKB|E1B9Q2	500	CLK2 "Uncharacterized protein"	0.550	0.446	0.497	2.5e-73
UNIPROTKB|F1P919	612	CLK2 "Uncharacterized protein"	0.550	0.364	0.497	2.5e-73
UNIPROTKB|B1AVT0	497	CLK2 "Dual-specificity protein	0.550	0.448	0.497	2.5e-73
UNIPROTKB|P49760	499	CLK2 "Dual specificity protein	0.550	0.446	0.497	2.5e-73
MGI|MGI:1098669	499	Clk2 "CDC-like kinase 2" [Mus	0.545	0.442	0.502	4.1e-73
RGD|1359711	500	Clk2 "CDC-like kinase 2" [Ratt	0.545	0.442	0.502	4.1e-73

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 977 (349.0 bits), Expect = 6.7e-147, Sum P(2) = 6.7e-147
 Identities = 188/267 (70%), Positives = 221/267 (82%)

Query:   125 VRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
             +R+   YR    I  + L       +    YRSFPIDLVRE+G QLLE VAFMH+LR+IH
Sbjct:   162 IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIH 221

Query:   185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
             TDLKPENILLVS++YVK+P+YK  SR  +D  Y K +PKSSAIK+IDFGSTT+E QD +Y
Sbjct:   222 TDLKPENILLVSSDYVKIPEYKG-SRLQRDVCY-KRVPKSSAIKVIDFGSTTYERQDQTY 279

Query:   245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 304
             +VSTRHYRAPEVILGLGW+YPCD+WSVGCI+VELC+GEALFQTHENLEHLAMMERVLGP 
Sbjct:   280 IVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPF 339

Query:   305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 364
             P  M+ + DR +EKY RRG RLDWPDGATSRDS++AV KL RL NLIMQHVDHSAG+LI+
Sbjct:   340 PQQMLKKVDRHSEKYVRRG-RLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELIN 398

Query:   365 LLQGLLRYDPAERLKAREALRHPFFTR 391
             ++QGLLR+DP+ER+ AREALRHPFF R
Sbjct:   399 MVQGLLRFDPSERITAREALRHPFFAR 425

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 838 (300.0 bits), Expect = 8.2e-122, Sum P(3) = 8.2e-122
 Identities = 158/236 (66%), Positives = 194/236 (82%)

Query:   154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
             +Y +FP+ LVR+ G QLLESVA+MHEL+L+HTDLKPENILLVS+E VK+PD K   RS+ 
Sbjct:   164 KYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNK---RSAA 220

Query:   214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
             + ++F+ LPKSSAIKLIDFGST  +++ H  +V TRHYR+PEVILGLGW+Y CDLWS+GC
Sbjct:   221 NETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGC 280

Query:   274 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 333
             IL ELC+GEALFQTH+NLEHLAMMER LGPLP HM  +A R AEKYFRRG RL+WP+GA 
Sbjct:   281 ILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGAN 340

Query:   334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             SR+S+RAV +L RL +++ +HVD++     DLL GLL YDP+ERL A EAL HPFF
Sbjct:   341 SRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPFF 396

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
 Identities = 215/237 (90%), Positives = 231/237 (97%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             YRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+PDYKFLSR +KD
Sbjct:   209 YRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKD 268

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
             GSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GWNYPCDLWS+GCI
Sbjct:   269 GSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCI 328

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             LVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRRGA+LDWP+GATS
Sbjct:   329 LVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRRGAKLDWPEGATS 388

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
             RDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KAREAL HPFFTR
Sbjct:   389 RDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALNHPFFTR 445

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 567 (204.7 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
 Identities = 118/237 (49%), Positives = 159/237 (67%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             Y  +PI  VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   +
Sbjct:   259 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDE 315

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
              S      KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI
Sbjct:   316 RSV-----KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 370

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             + E   G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++
Sbjct:   371 IFEYYVGFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSA 427

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                +R   K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   428 GRYVRENCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1B9Q2 CLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 567 (204.7 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
 Identities = 118/237 (49%), Positives = 159/237 (67%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             Y  +PI  VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   +
Sbjct:   259 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDE 315

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
              S      KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI
Sbjct:   316 RSV-----KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 370

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             + E   G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++
Sbjct:   371 IFEYYVGFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSA 427

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                +R   K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   428 GRYVRENCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1P919 CLK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 567 (204.7 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
 Identities = 118/237 (49%), Positives = 159/237 (67%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             Y  +PI  VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   +
Sbjct:   371 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDE 427

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
              S      KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI
Sbjct:   428 RSV-----KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 482

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             + E   G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++
Sbjct:   483 IFEYYVGFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSA 539

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                +R   K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   540 GRYVRENCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 593

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B1AVT0 CLK2 "Dual-specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 567 (204.7 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
 Identities = 118/237 (49%), Positives = 159/237 (67%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             Y  +PI  VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   +
Sbjct:   257 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDE 313

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
              S      KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI
Sbjct:   314 RSV-----KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 368

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             + E   G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++
Sbjct:   369 IFEYYVGFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSA 425

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                +R   K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   426 GRYVRENCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 479

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P49760 CLK2 "Dual specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 567 (204.7 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
 Identities = 118/237 (49%), Positives = 159/237 (67%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             Y  +PI  VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   +
Sbjct:   259 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDE 315

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
              S      KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI
Sbjct:   316 RSV-----KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 370

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             + E   G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++
Sbjct:   371 IFEYYVGFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSA 427

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                +R   K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   428 GRYVRENCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

MGI|MGI:1098669 Clk2 "CDC-like kinase 2" [Mus musculus (taxid:10090)]

 Score = 565 (203.9 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
 Identities = 118/235 (50%), Positives = 158/235 (67%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             Y  +PI  VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   +
Sbjct:   258 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDE 314

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
              S      KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI
Sbjct:   315 RSV-----KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 369

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             + E   G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++
Sbjct:   370 IFEYYVGFTLFQTHDNREHLAMMERILGPVPSRM-IRKTRK-QKYFYRG-RLDWDENTSA 426

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                +R   K LR   L  +  DH    L DL++ +L Y+PA+RL   EAL+HPFF
Sbjct:   427 GRYVRENCKPLRR-YLTSEAEDHH--QLFDLIENMLEYEPAKRLTLGEALQHPFF 478

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0032526 "response to retinoic acid" evidence=IDA

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

RGD|1359711 Clk2 "CDC-like kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 565 (203.9 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
 Identities = 118/235 (50%), Positives = 158/235 (67%)

Query:   155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             Y  +PI  VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   +
Sbjct:   259 YLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDE 315

Query:   215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
              S      KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI
Sbjct:   316 RSV-----KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 370

Query:   275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
             + E   G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++
Sbjct:   371 IFEYYVGFTLFQTHDNREHLAMMERILGPVPSRM-IRKTRK-QKYFYRG-RLDWDENTSA 427

Query:   335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                +R   K LR   L  +  DH    L DL++ +L Y+PA+RL   EAL+HPFF
Sbjct:   428 GRYVRENCKPLRR-YLTSEAEDHH--QLFDLIENMLEYEPAKRLTLGEALQHPFF 479

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0032526 "response to retinoic acid" evidence=ISO

GO:0042221 "response to chemical stimulus" evidence=ISO

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51566	AFC1_ARATH	2, ., 7, ., 1, 2, ., 1	0.7599	0.9654	0.8372	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.12.1	0.979
3rd Layer	2.7.12	0.983
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	405
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-60
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	1e-56
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-47
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-45
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-43
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-41
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-40
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-40
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	7e-38
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	7e-37
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-34
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-33
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	6e-33
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-31
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-31
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-30
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-29
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	8e-29
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-28
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-28
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-27
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-27
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-27
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-27
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-27
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-27
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-26
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-26
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-26
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-26
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-26
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-26
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-25
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-25
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	9e-25
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-24
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-23
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-23
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-23
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-23
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-23
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-22
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	5e-22
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	5e-22
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-22
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-22
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	6e-22
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-22
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-21
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-21
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-21
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-21
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	6e-21
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-21
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	8e-21
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-20
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	6e-20
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-19
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-19
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-19
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	7e-19
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	7e-19
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-18
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-18
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	3e-18
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-18
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	7e-18
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-18
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	8e-18
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-17
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-17
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-17
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-17
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-17
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	4e-17
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	7e-16
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-15
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	9e-15
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-14
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-14
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-14
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-14
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-14
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-13
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-13
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-13
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	3e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-13
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-12
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-12
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-12
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-12
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-12
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-12
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-12
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-12
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	9e-12
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-11
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-11
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-11
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-11
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-11
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-11
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	9e-11
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-10
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-10
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-10
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-10
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	5e-10
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	9e-10
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-09
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-09
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-09
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-09
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-09
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-09
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-09
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-09
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-09
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	6e-09
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-09
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-09
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-09
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	6e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	7e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	7e-09
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-09
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	8e-09
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-09
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	9e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-09
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-08
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-08
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	1e-08
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-08
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-08
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-08
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-07
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-07
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-07
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-07
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-07
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	4e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	6e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	6e-07
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	6e-07
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	8e-07
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	9e-07
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-06
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-06
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-06
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	3e-06
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-06
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	4e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	6e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	6e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	7e-06
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	7e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	8e-06
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	1e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	4e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	5e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	7e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	7e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	8e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	9e-05
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-04
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-04
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-04
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	3e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	3e-04
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	4e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	7e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	7e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	8e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	9e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.001
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.002
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.002
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.003
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  195 bits (497), Expect = 4e-60
 Identities = 92/328 (28%), Positives = 132/328 (40%), Gaps = 106/328 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD-I 150
           Y IL K+GEG+FG+V    D +  +LVAIK+++   I K RE  + EI +L++L +H  I
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-KHPNI 59

Query: 151 ---------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                GG       +      D  R   RQ+L ++ ++H   ++
Sbjct: 60  VRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIV 119

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKPENILL                  +DG           +KL DFG          
Sbjct: 120 HRDLKPENILL-----------------DEDGH----------VKLADFGLARQLDPGEK 152

Query: 244 Y--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
               V T  Y APEV+LG G+    D+WS+G IL EL +G+  F   + L    + +++ 
Sbjct: 153 LTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL--ELFKKIG 210

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
            P P                       P+   S                          +
Sbjct: 211 KPKPP-------------------FPPPEWDISP-------------------------E 226

Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFF 389
             DL++ LL  DP +RL A EAL+HPFF
Sbjct: 227 AKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  192 bits (489), Expect = 1e-56
 Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 66/353 (18%)

Query: 78  KDGHYVFAIGENL---TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
           ++GH+   +GE++   T R++ILS +GEGTFG+VVE +D ++KE  A+KIVR++ KY   
Sbjct: 112 EEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRD 171

Query: 135 AMIEIDVLQRLARHD----------------------IGGTRYRSFPIDLVRELG----R 168
           A IEI  ++++ + D                      I   +Y    +D + + G    R
Sbjct: 172 AKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHR 231

Query: 169 QLLESV--------AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
            L + +         F  EL L+HTDLKPENIL+ +++            +  D    + 
Sbjct: 232 HLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD------------TVVDPVTNRA 279

Query: 221 LPKSSA-IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
           LP     +++ D G    E    + +VSTRHYR+PEV+LGLGW Y  D+WS+GCI+ EL 
Sbjct: 280 LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELY 339

Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDW---PDGATSR 335
           +G+ L+ TH+NLEHL +ME+ LG LP     R     A   +    +L     P      
Sbjct: 340 TGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARI 399

Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
              R V +++R               L DL+ GLL YD  +RL AR+   HP+
Sbjct: 400 ARARPVREVIRDDL------------LCDLIYGLLHYDRQKRLNARQMTTHPY 440

Length = 467

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  161 bits (409), Expect = 5e-47
 Identities = 86/331 (25%), Positives = 129/331 (38%), Gaps = 106/331 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHD- 149
           Y +L K+G G+FG V +       ++VA+KI+  RS   K  + A  EI +L+RL  H  
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL-SHPN 59

Query: 150 I---------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
           I                     GG      +R      D  +++  Q+L  + ++H   +
Sbjct: 60  IVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGI 119

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 241
           IH DLKPENILL                                +K+ DFG +       
Sbjct: 120 IHRDLKPENILLDENGV---------------------------VKIADFGLAKKLLKSS 152

Query: 242 HSY--VVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
            S    V T  Y APEV+L G G+    D+WS+G IL EL +G+  F     L+ L ++ 
Sbjct: 153 SSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIR 212

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           R+LGP                       D P  ++  +                      
Sbjct: 213 RILGPPLE-------------------FDEPKWSSGSE---------------------- 231

Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             +  DL++  L  DP++R  A E L+HP+F
Sbjct: 232 --EAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  158 bits (401), Expect = 2e-45
 Identities = 93/333 (27%), Positives = 149/333 (44%), Gaps = 88/333 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH- 148
           Y  L K+GEGT+G V +  D +  E+VA+K +R ++   E     A+ EI +L+ L +H 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIR-LDNEEEGIPSTALREISLLKEL-KHP 58

Query: 149 ------------------------DIGG---TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                   D+      R      +L++ +  QLL  +A+ H  R
Sbjct: 59  NIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR 118

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
           ++H DLKP+NIL+                 ++DG           +KL DFG +  F   
Sbjct: 119 ILHRDLKPQNILI-----------------NRDGV----------LKLADFGLARAFGIP 151

Query: 241 DHSY--VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             +Y   V T  YRAPE++LG   ++   D+WSVGCI  E+ +G+ LF     ++ L  +
Sbjct: 152 LRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKI 211

Query: 298 ERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            ++LG P                        WP G T     +  +     P  + + + 
Sbjct: 212 FQILGTPTEE--------------------SWP-GVTKLPDYKPTFP-KFPPKDLEKVLP 249

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               + IDLL  +L+Y+PA+R+ A+EAL+HP+F
Sbjct: 250 RLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  152 bits (386), Expect = 2e-43
 Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 74/329 (22%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           +Y +L  +GEG +G V++C +    E+VAIK           ++ A+ E+ VL++L   +
Sbjct: 2   KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN 61

Query: 150 I---------GGTRYRSF------------------PIDLVRELGRQLLESVAFMHELRL 182
           I          G  Y  F                  P D VR    QLL+++A+ H   +
Sbjct: 62  IVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI 121

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           IH D+KPENIL+  +  +K+ D+ F           + L    A  L D+          
Sbjct: 122 IHRDIKPENILVSESGVLKLCDFGFA----------RALRARPASPLTDY---------- 161

Query: 243 SYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
              V+TR YRAPE+++G   NY  P D+W++GCI+ EL  GE LF    +++ L ++++ 
Sbjct: 162 ---VATRWYRAPELLVG-DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKC 217

Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LGPLP              F   A  +        +S+       R P  +       + 
Sbjct: 218 LGPLPPSHQELFSS--NPRFAGVAFPEPSQ----PESL-----ERRYPGKV-------SS 259

Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFF 389
             +D L+  LR DP ERL   E L+HP+F
Sbjct: 260 PALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  148 bits (375), Expect = 1e-41
 Identities = 96/334 (28%), Positives = 143/334 (42%), Gaps = 84/334 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLAR-- 147
           RY+IL ++GEG  G V +  D E  E VA+K   + R        A+ EI  LQ      
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 148 -------------------------HDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                     ++     R  P   V+   R LL+ VA+MH   +
Sbjct: 61  VVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP N+L+ +   +K+ D+  L+R   +                      + HQ  
Sbjct: 121 MHRDLKPANLLISADGVLKIADFG-LARLFSEE-----------------EPRLYSHQ-- 160

Query: 243 SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
              V+TR YRAPE++ G   ++   DLW+VGCI  EL +G  LF    ++E LA++ R L
Sbjct: 161 ---VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTL 217

Query: 302 G-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN----LIMQHVD 356
           G P                        WP   +  D     +  +  P      + +   
Sbjct: 218 GTPNEE--------------------TWPGLTSLPD-----YNKITFPESKPIPLEEIFP 252

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
            ++ + +DLL+GLL YDP++RL A EALRHP+FT
Sbjct: 253 DASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  145 bits (368), Expect = 1e-40
 Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 87/333 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA-AMIEIDVLQRLARHD-- 149
           Y+++ ++G+GTFG V    + E  ELVAIK + +    + E   + E+  L++L  H   
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNI 60

Query: 150 ---------------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                      +   + + F   ++R +  Q+L+ +A +H+   
Sbjct: 61  VKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF 120

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
            H DLKPEN+L+   E VK+ D+  L+R  +    +                T +     
Sbjct: 121 FHRDLKPENLLVSGPEVVKIADFG-LAREIRSRPPY----------------TDY----- 158

Query: 243 SYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
              VSTR YRAPE++L     + P D+W++GCI+ EL +   LF     ++ L  +  VL
Sbjct: 159 ---VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVL 215

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPN----LIMQHVD 356
           G  P                     DWP+G       +   KL  R P      + Q + 
Sbjct: 216 GT-PTKQ------------------DWPEG------YKLASKLGFRFPQFAPTSLHQLIP 250

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           +++ + IDL++ +LR+DP +R  A +AL+HP+F
Sbjct: 251 NASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  145 bits (367), Expect = 2e-40
 Identities = 95/333 (28%), Positives = 136/333 (40%), Gaps = 87/333 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDI 150
           Y+ L K+GEGT+G V +  D    E+VAIK ++   +     + A+ EI +L+ L   +I
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Query: 151 GG---------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                         R R  P  L++    QLL+ +AF H   ++
Sbjct: 61  IKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKPEN+L                           +     +KL DFG          
Sbjct: 121 HRDLKPENLL---------------------------INTEGVLKLADFGLARSFGSPVR 153

Query: 244 YV---VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V TR YRAPE++LG  G++ P D+WSVGCI  EL S   LF     ++ L  + R
Sbjct: 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFR 213

Query: 300 VLG-PLPHHM-VIRADRRAEKY-FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG P P       +  R  K+ F + A +  P                  PN       
Sbjct: 214 TLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLP---------------KLFPNA------ 252

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             +   +DLL  +L YDP +R+ A +AL HP+F
Sbjct: 253 --SPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  137 bits (348), Expect = 7e-38
 Identities = 93/333 (27%), Positives = 142/333 (42%), Gaps = 88/333 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARH- 148
           Y+IL K+GEGTF +V++    +  +  AIK       ++    +    EI  L+RL+ H 
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIK--CMKKHFKSLEQVNNLREIQALRRLSPHP 58

Query: 149 -----------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
                                        ++   R R  P   V+    QLL+S+  MH 
Sbjct: 59  NILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR 118

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS--TTF 237
             + H D+KPENIL+                            K   +KL DFGS    +
Sbjct: 119 NGIFHRDIKPENILI----------------------------KDDILKLADFGSCRGIY 150

Query: 238 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
               ++  +STR YRAPE +L  G +    D+W+VGC+  E+ S   LF     L+ +A 
Sbjct: 151 SKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAK 210

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           +  VLG  P       D    K FR+   ++  +  + + +   + KLL        +  
Sbjct: 211 IHDVLG-TP-------DAEVLKKFRKSRHMN-YNFPSKKGT--GLRKLL-------PNAS 252

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                 +DLL+ LL YDP ER+ A++ALRHP+F
Sbjct: 253 AEG---LDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  135 bits (342), Expect = 7e-37
 Identities = 92/345 (26%), Positives = 145/345 (42%), Gaps = 107/345 (31%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHD- 149
           Y  ++++GEGT+GQV +  + +  ELVA+K +R  N+       A+ EI +LQ+L RH  
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPN 59

Query: 150 -----------IGGTRYRSFPI---DL---------------VRELGRQLLESVAFMHEL 180
                        G+ Y  F     DL               ++   +QLLE + ++H  
Sbjct: 60  IVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN 119

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTF 237
            ++H D+K  NIL+                 + DG           +KL DFG     T 
Sbjct: 120 GILHRDIKGSNILI-----------------NNDGV----------LKLADFGLARPYTK 152

Query: 238 EH-QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
            +  D++  V T  YR PE++LG   +    D+WSVGCIL EL  G+ +FQ    LE L 
Sbjct: 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE 212

Query: 296 MMERVLGP-----------LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
            +  + G            LP    ++  +  ++                R+  + +   
Sbjct: 213 KIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRL--------------REFFKHL--- 255

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                     +D SA   +DLL  LL  DP +R+ A +AL+H +F
Sbjct: 256 ----------IDPSA---LDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  128 bits (323), Expect = 3e-34
 Identities = 94/337 (27%), Positives = 139/337 (41%), Gaps = 91/337 (27%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMI-EIDVLQRLARH- 148
           Y  L+++GEG +G V +  D      VA+K VR      E    + + EI +L++L    
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFE 59

Query: 149 --------DI--GGTRYRSFPIDLVRE-------------------------LGRQLLES 173
                   D+  G    R   + LV E                         L RQLL  
Sbjct: 60  HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRG 119

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           V F+H  R++H DLKP+NIL+ S   VK+ D+  L+R      Y   +  +S        
Sbjct: 120 VDFLHSHRIVHRDLKPQNILVTSDGQVKIADFG-LARI-----YSFEMALTS-------- 165

Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                      VV T  YRAPEV+L   +  P D+WSVGCI  EL     LF+     + 
Sbjct: 166 -----------VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ 214

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNLIM 352
           L  +  V+G LP                  +  +WP + +  R S  +     R     +
Sbjct: 215 LDKIFDVIG-LP------------------SEEEWPRNVSLPRSSFPS--YTPRSFKSFV 253

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             +        DLL+ +L ++P +R+ A EAL+HP+F
Sbjct: 254 PEICEEGL---DLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  123 bits (311), Expect = 3e-33
 Identities = 61/212 (28%), Positives = 89/212 (41%), Gaps = 60/212 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDI-------- 150
           GEG FG V    D +  + VAIKI++    +   E  + EI++L++L   +I        
Sbjct: 2   GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE 61

Query: 151 -------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE 190
                        GG+              D +  +  Q+LE + ++H   +IH DLKPE
Sbjct: 62  DENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPE 121

Query: 191 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS--- 247
           NILL S                              +KL DFG +     D S + +   
Sbjct: 122 NILLDSDNGK--------------------------VKLADFGLSKLLTSDKSLLKTIVG 155

Query: 248 TRHYRAPEVILGLG-WNYPCDLWSVGCILVEL 278
           T  Y APEV+LG G ++   D+WS+G IL EL
Sbjct: 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  124 bits (314), Expect = 6e-33
 Identities = 93/339 (27%), Positives = 150/339 (44%), Gaps = 96/339 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---------IVRSINKYREAAM------- 136
           +Y  LSK+GEG++G V +C + E  ++VAIK         +++ I   RE  M       
Sbjct: 2   KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKI-ALREIRMLKQLKHP 60

Query: 137 -----IEI----------------DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVA 175
                IE+                 VL  L ++       R  P  L++++  Q L++V 
Sbjct: 61  NLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP------RGVPEHLIKKIIWQTLQAVN 114

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 234
           F H+   IH D+KPENIL+                            K   IKL DFG +
Sbjct: 115 FCHKHNCIHRDVKPENILIT---------------------------KQGQIKLCDFGFA 147

Query: 235 TTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
                    Y   V+TR YRAPE+++G   +  P D+W++GC+  EL +G+ L+    ++
Sbjct: 148 RILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV 207

Query: 292 EHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
           + L ++ + LG L P H  I       ++F +G  +  P    +R+ + +     + PN+
Sbjct: 208 DQLYLIRKTLGDLIPRHQQI---FSTNQFF-KGLSIPEP---ETREPLES-----KFPNI 255

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                   +   +  L+G L+ DP ERL   E L HP+F
Sbjct: 256 --------SSPALSFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  121 bits (305), Expect = 1e-31
 Identities = 94/354 (26%), Positives = 139/354 (39%), Gaps = 111/354 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA------AMIEIDVLQRLA 146
           RY    K+GEGT+  V +  D E   +VAIK ++   +          A+ EI +LQ L 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL- 59

Query: 147 RHD-IGGTR----YRSFPIDLVRELGR------------------------QLLESVAFM 177
           +H  I G      ++S  I+LV E                             L  + ++
Sbjct: 60  KHPNIIGLLDVFGHKSN-INLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYL 118

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS--T 235
           H   ++H DLKP N+L+ S   +K+ D+  L+RS                    FGS   
Sbjct: 119 HSNWILHRDLKPNNLLIASDGVLKLADFG-LARS--------------------FGSPNR 157

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
              HQ     V TR YRAPE++ G   +    D+WSVGCI  EL           +++ L
Sbjct: 158 KMTHQ-----VVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL 212

Query: 295 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN-LIM 352
             +   LG P                       +WP              +  LP+ +  
Sbjct: 213 GKIFEALGTPTEE--------------------NWPG-------------VTSLPDYVEF 239

Query: 353 QHVDH--------SAG-DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
           +            +A  D +DLLQ LL  +P +R+ AR+AL HP+F+ D   PT
Sbjct: 240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP-APT 292

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  121 bits (305), Expect = 3e-31
 Identities = 84/346 (24%), Positives = 134/346 (38%), Gaps = 103/346 (29%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQR 144
           RY +L  +G G +G V    D      VAIK + ++           RE     I +L+ 
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILRE-----IKLLRH 55

Query: 145 LARHD--------IGGTRYRSF--------------------PIDLVRELGR----QLLE 172
           L RH+        +       F                    P  L  +  +    Q+L 
Sbjct: 56  L-RHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILR 114

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            + ++H   +IH DLKP NIL+                         N   +  +K+ DF
Sbjct: 115 GLKYLHSANVIHRDLKPSNILV-------------------------N--SNCDLKICDF 147

Query: 233 G-----STTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL 284
           G         + +     YVV TR YRAPE++L    +    D+WSVGCI  EL + + L
Sbjct: 148 GLARGVDPDEDEKGFLTEYVV-TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPL 206

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F   + ++ L ++  VLG                       L +     +R+ ++++ K 
Sbjct: 207 FPGRDYIDQLNLIVEVLGTPSEED-----------------LKFITSEKARNYLKSLPKK 249

Query: 345 LRLP-NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            + P + +       A   IDLL+ +L +DP +R+ A EAL HP+ 
Sbjct: 250 PKKPLSKLFPGASPEA---IDLLEKMLVFDPKKRITADEALAHPYL 292

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  118 bits (296), Expect = 2e-30
 Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 77/330 (23%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           ++ +L  +GEG +G V++C   E KE+VAIK  +      + +E  + E+ +L+ L + +
Sbjct: 2   KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN 61

Query: 150 I---------GGTRYRSF------------------PIDLVRELGRQLLESVAFMHELRL 182
           I          G  Y  F                  P + VR    QL++++ + H+  +
Sbjct: 62  IVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI 121

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H D+KPEN+L+   + +K+ D+ F +R+  +GS                      + ++
Sbjct: 122 VHRDIKPENLLISHNDVLKLCDFGF-ARNLSEGS----------------------NANY 158

Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           +  V+TR YR+PE++LG  +    D+WSVGCIL EL  G+ LF     ++ L  +++VLG
Sbjct: 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLG 218

Query: 303 PLPHHMVIRADRRAEKYFRRGAR---LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           PLP   +        K F    R   L +P     +   R    +L             +
Sbjct: 219 PLPAEQM--------KLFYSNPRFHGLRFPAVNHPQSLERRYLGIL-------------S 257

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           G L+DL++ LL+ +P +R    + L HP F
Sbjct: 258 GVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  114 bits (288), Expect = 2e-29
 Identities = 73/327 (22%), Positives = 114/327 (34%), Gaps = 113/327 (34%)

Query: 101 GEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDI------- 150
           G G+FG V    D +  EL+A+K   +     +  EA   EI +L  L   +I       
Sbjct: 9   GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSE 68

Query: 151 ----------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                           GG+      ++   P  ++R+  RQ+LE +A++H   ++H D+K
Sbjct: 69  RDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIK 128

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------STTFEHQDH 242
             NIL+ S                              +KL DFG               
Sbjct: 129 GANILVDS---------------------------DGVVKLADFGCAKRLGDIETGEGTG 161

Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           S V  T ++ APEVI G  +    D+WS+GC ++E+ +G+                    
Sbjct: 162 S-VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP------------------- 201

Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 362
           P                                + M A++K+             S  + 
Sbjct: 202 PWSELG---------------------------NPMAALYKIGSSGEPPEIPEHLSE-EA 233

Query: 363 IDLLQGLLRYDPAERLKAREALRHPFF 389
            D L+  LR DP +R  A E L+HPF 
Sbjct: 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  114 bits (288), Expect = 8e-29
 Identities = 101/350 (28%), Positives = 150/350 (42%), Gaps = 94/350 (26%)

Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-----------RSINKYREA 134
           I +++  +Y IL K+G+G +G V +  D   KE+VA+K +           R+   +RE 
Sbjct: 1   IDKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRT---FRE- 56

Query: 135 AMIEIDVLQRLARH----------------DIGGTRYRSFPI---DL------------- 162
               I  LQ L  H                DI    Y  F     DL             
Sbjct: 57  ----IMFLQELGDHPNIVKLLNVIKAENDKDI----YLVFEYMETDLHAVIRANILEDVH 108

Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R +  QLL+++ ++H   +IH DLKP NILL S   VK+ D+  L+RS           
Sbjct: 109 KRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFG-LARS----------- 156

Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSG 281
                  +       E+   +  V+TR YRAPE++LG        D+WSVGCIL E+  G
Sbjct: 157 -------LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLG 209

Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + LF     L  L  +  V+GP         D  +         +  P  AT  DS+   
Sbjct: 210 KPLFPGTSTLNQLEKIIEVIGPPS-----AEDIES---------IKSPFAATMLDSL--- 252

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
               R    + + +  ++ D +DLL+ LL ++P +RL A EAL HP+  +
Sbjct: 253 --PSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  113 bits (284), Expect = 1e-28
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 97/340 (28%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLA--- 146
           Y  L+++ EGT+G V    D +  E+VA+K ++ + K +E     ++ EI++L +L    
Sbjct: 7   YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLK-MEKEKEGFPITSLREINILLKLQHPN 65

Query: 147 -----------------------RHDIGG---TRYRSFPIDLVRELGRQLLESVAFMHEL 180
                                   HD+     T  + F    V+ L  QLL  VA +H+ 
Sbjct: 66  IVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN 125

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
            ++H DLK  N+L                           L     +K+ DFG +  +  
Sbjct: 126 WILHRDLKTSNLL---------------------------LNNRGILKICDFGLAREYGS 158

Query: 240 QDHSY--VVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
               Y  +V T  YRAPE++LG   ++   D+WSVGCI  EL + + LF     ++ L  
Sbjct: 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNK 218

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD-----GATSRDSMRAVWKLLR--LPN 349
           + ++LG  P           EK         WP      GA  +   +  +  LR   P 
Sbjct: 219 IFKLLG-TP----------TEK--------IWPGFSELPGAKKKTFTKYPYNQLRKKFPA 259

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           L +           DLL  LL YDPA+R+ A +AL+HP+F
Sbjct: 260 LSLSDNGF------DLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  112 bits (282), Expect = 2e-28
 Identities = 90/337 (26%), Positives = 143/337 (42%), Gaps = 95/337 (28%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------------RSINKYREAAMIEI- 139
           ++ L K+GEGT+  V +  +    E+VA+K +             R I+  +E     I 
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIV 61

Query: 140 ---DVL--------------QRLARH-DIGGTRYRSFPIDLVRELGRQLLESVAFMHELR 181
              DV+              + L ++ D  G R  +   + V+    QLL+ +AF HE R
Sbjct: 62  RLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVR-GALDPNTVKSFTYQLLKGIAFCHENR 120

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-------- 233
           ++H DLKP+N+L+                 +K G           +KL DFG        
Sbjct: 121 VLHRDLKPQNLLI-----------------NKRGE----------LKLADFGLARAFGIP 153

Query: 234 STTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
             TF ++     V T  YRAP+V+LG   ++   D+WSVGCI+ E+ +G  LF    N +
Sbjct: 154 VNTFSNE-----VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED 208

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            L  + R++G  P         +  +Y     +  +P                  P  + 
Sbjct: 209 QLLKIFRIMGT-PTESTWPGISQLPEY-----KPTFP---------------RYPPQDLQ 247

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           Q   H+    IDLL  LL+ +P  R+ A +AL+HP+F
Sbjct: 248 QLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  111 bits (279), Expect = 1e-27
 Identities = 83/338 (24%), Positives = 136/338 (40%), Gaps = 76/338 (22%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRL--- 145
            Y IL K+GEGTFG+V +    +   +VA+K +  ++  ++     A+ EI +L++L   
Sbjct: 9   DYEILGKLGEGTFGEVYKARQIKTGRVVALKKI-LMHNEKDGFPITALREIKILKKLKHP 67

Query: 146 --------------ARHDIGGTRYRSFPI---DLVRELG---------------RQLLES 173
                               G+ Y   P    DL   L                 QLLE 
Sbjct: 68  NVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEG 127

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + ++HE  ++H D+K  NIL+ +   +K+ D+  L+R         N            G
Sbjct: 128 INYLHENHILHRDIKAANILIDNQGILKIADFG-LARPYDGPPP--NPKGGGG------G 178

Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENL 291
            T      ++ +V TR YR PE++LG    Y    D+W +GC+  E+ +   + Q   ++
Sbjct: 179 GTR----KYTNLVVTRWYRPPELLLGER-RYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
           + L ++ ++ G                         WP G  S      V      P  +
Sbjct: 234 DQLHLIFKLCGTPTEE-------------------TWP-GWRSLPGCEGVHSFTNYPRTL 273

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            +       + +DLL  LL  DP +RL A +AL HP+F
Sbjct: 274 EERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  110 bits (277), Expect = 2e-27
 Identities = 88/332 (26%), Positives = 131/332 (39%), Gaps = 89/332 (26%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHD--- 149
           L+++GEGT+G V    D    E+VA+K VR ++  R+   I    EI +L  L RH    
Sbjct: 12  LNRIGEGTYGIVYRARDTTSGEIVALKKVR-MDNERDGIPISSLREITLLLNL-RHPNIV 69

Query: 150 -----IGGTRYRS----------------------FPIDLVRELGRQLLESVAFMHELRL 182
                + G    S                      F    V+ L  QLL  + ++HE  +
Sbjct: 70  ELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFI 129

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 241
           IH DLK  N+LL                                +K+ DFG + T+    
Sbjct: 130 IHRDLKVSNLLLTD---------------------------KGCLKIADFGLARTYGLPA 162

Query: 242 HSY--VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
                 V T  YRAPE++LG   +    D+W+VGCIL EL + + L      +E L ++ 
Sbjct: 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII 222

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDH 357
           ++LG  P+  +                  WP    S   +   + L + P N +      
Sbjct: 223 QLLGT-PNESI------------------WPG--FSDLPLVGKFTLPKQPYNNLKHKFPW 261

Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            +   + LL  LL YDP +R  A EAL   +F
Sbjct: 262 LSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  109 bits (274), Expect = 2e-27
 Identities = 71/326 (21%), Positives = 123/326 (37%), Gaps = 105/326 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDI-- 150
           + IL K+G+G FG+V +       + VAIK+++    + +E  + EI +L++    +I  
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 151 -------------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                              GG+         ++     +  + ++LL+ + ++H   +IH
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH-QDH 242
            D+K  NILL                 + DG           +KLIDFG S      +  
Sbjct: 122 RDIKAANILL-----------------TSDGE----------VKLIDFGLSAQLSDTKAR 154

Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           + +V T ++ APEVI G  ++Y  D+WS+G   +EL  G+  +   E     A+ +    
Sbjct: 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY--SELPPMKALFKIATN 212

Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 362
             P                    L  P                       +  D      
Sbjct: 213 GPP-------------------GLRNP----------------------EKWSDE----F 227

Query: 363 IDLLQGLLRYDPAERLKAREALRHPF 388
            D L+  L+ +P +R  A + L+HPF
Sbjct: 228 KDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  109 bits (274), Expect = 2e-27
 Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 42/227 (18%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYR--EAAMIEIDVLQRLARH- 148
           ++    +GEG+F  VV   + E  +  AIKI+  R + K +  +   IE +VL RL  H 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 149 -------------------------DIGG--TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                    ++     +Y S      R    ++L ++ ++H   
Sbjct: 63  GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122

Query: 182 LIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +IH DLKPENILL    ++K+ D+   K L  +S   S   N   ++ I      +    
Sbjct: 123 IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES---NKGDATNIDSQIEKNRRR- 178

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
               +  V T  Y +PE++         DLW++GCI+ ++ +G+  F
Sbjct: 179 ---FASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  109 bits (273), Expect = 4e-27
 Identities = 92/333 (27%), Positives = 139/333 (41%), Gaps = 93/333 (27%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLAR------ 147
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L        
Sbjct: 5   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 64

Query: 148 HDIGGTRYRSF----------------------PIDLVRELGRQLLESVAFMHELRLIHT 185
            D+  T  + +                      P+ L++    QLL+ +AF H  R++H 
Sbjct: 65  LDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 124

Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--------TF 237
           DLKP+N+L+                 + +G          AIKL DFG          T+
Sbjct: 125 DLKPQNLLI-----------------NTEG----------AIKLADFGLARAFGVPVRTY 157

Query: 238 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  
Sbjct: 158 THE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 212

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           + R LG  P  +V         Y  + +   W      R     V     +P L      
Sbjct: 213 IFRTLGT-PDEVVWPGVTSLPDY--KPSFPKWA-----RQDFSKV-----VPPL------ 253

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               D  DLL  +L YDP +R+ A+ AL HPFF
Sbjct: 254 --DEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  108 bits (272), Expect = 4e-27
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 94/338 (27%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--IVRSINKY-REAAMIEIDVLQRLARHD 149
           +Y  L  +GEG++G V++C   E  ++VAIK  +    +K  ++ AM EI +L++L RH+
Sbjct: 2   KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHE 60

Query: 150 -----IGGTRYR-------------------SFPIDL----VRELGRQLLESVAFMHELR 181
                I   R +                    +P  L    VR+   Q+L  + F H   
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
           +IH D+KPENIL VS                          +S  +KL DFG + T    
Sbjct: 121 IIHRDIKPENIL-VS--------------------------QSGVVKLCDFGFARTLAAP 153

Query: 241 DHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
              Y   V+TR YRAPE+++G   +    D+W+VGC++ E+ +GE LF    +++ L  +
Sbjct: 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHI 213

Query: 298 ERVLGPL-PHHMVIRADRRAEKYFRR-----GARLDWPDGATSRDSMRAVWKLLRLPNLI 351
            + LG L P H  I         F++     G RL  P+     + +       R P L 
Sbjct: 214 IKCLGNLIPRHQEI---------FQKNPLFAGMRL--PE-VKEIEPLEK-----RFPKL- 255

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                  +G ++DL +  LR DP +R  + + L H FF
Sbjct: 256 -------SGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  108 bits (272), Expect = 1e-26
 Identities = 86/354 (24%), Positives = 145/354 (40%), Gaps = 81/354 (22%)

Query: 85  AIGENLTPRYRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------ 137
            +  +++ RY      +GEGT+G+V + +D    ++VAIK V+ I +             
Sbjct: 1   NMSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVK-IIEISNDVTKDRQLVG 59

Query: 138 ----------EIDVLQRLARHDIGGTR----YRSFPIDLVRELG---------------- 167
                     E+ ++  +   +I G         F I+LV ++                 
Sbjct: 60  MCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF-INLVMDIMASDLKKVVDRKIRLTE 118

Query: 168 -------RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
                   Q+L  +  +H+   +H DL P NI + S    K+ D+  L+R      Y   
Sbjct: 119 SQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG-LARRYGYPPYSDT 177

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
           L K   ++           ++ +  V T  YRAPE+++G   +++  D+WSVGCI  EL 
Sbjct: 178 LSKDETMQR---------REEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELL 228

Query: 280 SGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 338
           +G+ LF     ++ L  +  +LG P                       +WP  A      
Sbjct: 229 TGKPLFPGENEIDQLGRIFELLGTPNED--------------------NWPQ-AKKLPLY 267

Query: 339 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                  R P  +     +++ D IDLLQ LL+ +P ER+ A+EAL+H +F  D
Sbjct: 268 TEFTP--RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319

Length = 335

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  107 bits (268), Expect = 2e-26
 Identities = 92/341 (26%), Positives = 140/341 (41%), Gaps = 103/341 (30%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLAR-- 147
           Y+ + K+GEGT+G V +  D    E+VA+K +R +    E     A+ EI +L+ L    
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIR-LETEDEGVPSTAIREISLLKELNHPN 59

Query: 148 ----HDIGGTRYR----------------------SFPIDLVRELGRQLLESVAFMHELR 181
                D+  +  +                           L++    QLL+ +A+ H  R
Sbjct: 60  IVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR 119

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST------ 235
           ++H DLKP+N+L                           + +  A+KL DFG        
Sbjct: 120 VLHRDLKPQNLL---------------------------IDREGALKLADFGLARAFGVP 152

Query: 236 --TFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENL 291
             T+ H+     V T  YRAPE++LG    Y  P D+WS+GCI  E+ +   LF     +
Sbjct: 153 VRTYTHE-----VVTLWYRAPEILLG-SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI 206

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV---WKLLRLP 348
           + L  + R LG  P   V                  WP G TS    +     W    L 
Sbjct: 207 DQLFRIFRTLGT-PDEDV------------------WP-GVTSLPDYKPTFPKWARQDLS 246

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            ++    D      +DLL  +L YDPA+R+ A+ AL+HP+F
Sbjct: 247 KVVPNL-DEDG---LDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  107 bits (270), Expect = 3e-26
 Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 89/344 (25%)

Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-------------------------- 123
           +  RY+ +  +G G +G V    D    + VAIK                          
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK 62

Query: 124 ---IV--RSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPI--DLVRELGRQLLESVAF 176
              I+  R I +   A   ++ V+  L   D+    +   P+  + +R    QLL  + +
Sbjct: 63  HDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKY 122

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           +H   +IH DLKP N+L+     +++ D+   + LS S  +  YF               
Sbjct: 123 IHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMT------------- 169

Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLE 292
               E+      V+TR YRAPE++L L  +    D+WSVGCI  E+     LF     + 
Sbjct: 170 ----EY------VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH 219

Query: 293 HLAMMERVLGPLPHHMV--IRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRL 347
            L ++  VLG     ++  I +D R  KY     R   + W                   
Sbjct: 220 QLKLILSVLGSPSEEVLNRIGSD-RVRKYIQNLPRKQPVPWSKIFPKASP---------- 268

Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                        + +DLL  +L++DP ER+   +AL+HPF  +
Sbjct: 269 -------------EALDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  106 bits (266), Expect = 4e-26
 Identities = 96/340 (28%), Positives = 136/340 (40%), Gaps = 92/340 (27%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHDI 150
           Y  L K+GEGT+G+V +  D    +LVA+K  R           A+ EI +LQ L+   I
Sbjct: 3   YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-ESI 61

Query: 151 --------------------------------------GGTRYRSFPIDLVRELGRQLLE 172
                                                 G    R  P   ++    QLL+
Sbjct: 62  YIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLK 121

Query: 173 SVAFMHELRLIHTDLKPENILL-VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
            VA  H+  ++H DLKP+N+L+      +K+ D   L R+                  I 
Sbjct: 122 GVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLG-LGRAFS----------------IP 164

Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHEN 290
             S T E       + T  YRAPEV+LG   ++ P D+WSVGCI  E+   + LF     
Sbjct: 165 VKSYTHE-------IVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE 217

Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-SMRAVWKLLRLPN 349
           L+ L  + ++LG  P   V                  WP  +  RD      WK   L  
Sbjct: 218 LQQLLHIFKLLGT-PTEQV------------------WPGVSKLRDWHEFPQWKPQDLSR 258

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            +           +DLLQ +LRYDPA+R+ A+ AL HP+F
Sbjct: 259 AVPDLSPEG----LDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  105 bits (265), Expect = 4e-26
 Identities = 88/335 (26%), Positives = 144/335 (42%), Gaps = 90/335 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHDI 150
           Y  + K+GEGT+G V +  + +  ++VA+K +R  ++       A+ EI +L+ L   +I
Sbjct: 2   YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI 61

Query: 151 GG----------------------TRY-------RSFPIDLVRELGRQLLESVAFMHELR 181
                                    +Y       +    +LV+    Q+L+ + F H  R
Sbjct: 62  VCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 238
           ++H DLKP+N+L+                                IKL DFG   +    
Sbjct: 122 VLHRDLKPQNLLI---------------------------DNKGVIKLADFGLARAFGIP 154

Query: 239 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
            + +++ V T  YRAPEV+LG   ++ P D+WS+G I  E+ + + LF     ++ L  +
Sbjct: 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI 214

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV---WKLLRLPNLIMQH 354
            R+LG  P   V                  WP G TS    +     WK       +   
Sbjct: 215 FRILGT-PTEDV------------------WP-GVTSLPDYKNTFPKWK----KGSLRSA 250

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           V +   D +DLL+ +L YDPA+R+ A++AL HP+F
Sbjct: 251 VKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  104 bits (263), Expect = 4e-26
 Identities = 75/327 (22%), Positives = 126/327 (38%), Gaps = 116/327 (35%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI--EIDVLQRL----------A 146
           G+G+FG+V+     +  +L A+K+++   I K +E      E ++L R+          A
Sbjct: 2   GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYA 61

Query: 147 RHD-----------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP 189
                          GG      ++   F  +  R    +++ ++ ++H L +I+ DLKP
Sbjct: 62  FQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKP 121

Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS----TTFEHQDHSYV 245
           ENILL                   DG           IKL DFG     ++   + +++ 
Sbjct: 122 ENILL-----------------DADGH----------IKLTDFGLAKELSSEGSRTNTF- 153

Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP 305
             T  Y APEV+LG G+    D WS+G +L E+ +G+  F   +  E   + E++L    
Sbjct: 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYEKIL---- 206

Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
                               L +P+  +                           +  DL
Sbjct: 207 -----------------KDPLRFPEFLSP--------------------------EARDL 223

Query: 366 LQGLLRYDPAERLKAREA---LRHPFF 389
           + GLL+ DP +RL +  A     HPFF
Sbjct: 224 ISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  103 bits (260), Expect = 5e-25
 Identities = 90/336 (26%), Positives = 138/336 (41%), Gaps = 77/336 (22%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRL 145
            ++ PRY+ LS +GEG +G V           VAIK +       + +  + EI +L+R 
Sbjct: 1   FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF 60

Query: 146 ARHDIGGTR-------YRSF----------PIDLVRELGRQ-------------LLESVA 175
              +I G         + SF            DL + +  Q             +L  + 
Sbjct: 61  KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLK 120

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++H   ++H DLKP N+LL +   +K+ D+  L+R               A    D    
Sbjct: 121 YIHSANVLHRDLKPSNLLLNTNCDLKICDFG-LAR--------------IADPEHDHTGF 165

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
             E+      V+TR YRAPE++L   G+    D+WSVGCIL E+ S   LF   + L  L
Sbjct: 166 LTEY------VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL 219

Query: 295 AMMERVLGPLPHHMVIRA--DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            ++  VLG  P    +      RA  Y +    L +             W  L  P    
Sbjct: 220 NLILGVLGT-PSQEDLNCIISLRARNYIK---SLPFKPKVP--------WNKL-FP---- 262

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
            + D  A   +DLL  +L ++P +R+   EAL HP+
Sbjct: 263 -NADPKA---LDLLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  104 bits (260), Expect = 5e-25
 Identities = 81/344 (23%), Positives = 118/344 (34%), Gaps = 113/344 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH- 148
           YRIL K+GEG+FG+V    D +    VA+K++     S +K  E  + EI +L  L    
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 149 --------------------DIGGT----------RYRSFPIDLVRELGRQLLESVAFMH 178
                                + G           R           +  Q+L ++ ++H
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG----- 233
              +IH D+KPENILL                                +KLIDFG     
Sbjct: 119 SKGIIHRDIKPENILLD--------------------------RDGRVVKLIDFGLAKLL 152

Query: 234 ----STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPC---DLWSVGCILVELCSGEALFQ 286
               ST+      S  V T  Y APEV+LGL   Y     D+WS+G  L EL +G   F+
Sbjct: 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFE 212

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
             +N    +   +++  LP   +                                     
Sbjct: 213 GEKNSSATSQTLKIILELPTPSL------------------------------------- 235

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
              L   + +  +    DLL+ LL  DP  RL +   L H    
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  102 bits (257), Expect = 9e-25
 Identities = 88/354 (24%), Positives = 146/354 (41%), Gaps = 113/354 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  L+K+G+GTFG+V +    + K++VA+K V   N+ +E     A+ EI +LQ L   
Sbjct: 13  KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHE 71

Query: 149 DI------------GGTRYRS-----------------------FPIDLVRELGRQLLES 173
           ++               RY+                        F +  ++++ + LL  
Sbjct: 72  NVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNG 131

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + ++H  +++H D+K  NIL+                 +KDG           +KL DFG
Sbjct: 132 LYYIHRNKILHRDMKAANILI-----------------TKDG----------ILKLADFG 164

Query: 234 -----STTFEHQDHSYV--VSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEAL 284
                S +   + + Y   V T  YR PE++LG   +Y  P D+W  GCI+ E+ +   +
Sbjct: 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLG-ERDYGPPIDMWGAGCIMAEMWTRSPI 223

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
            Q +     L ++ ++ G +   +                   WP G    +    ++K 
Sbjct: 224 MQGNTEQHQLTLISQLCGSITPEV-------------------WP-GVDKLE----LFKK 259

Query: 345 LRLPNLIMQHV---------DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           + LP    + V         D  A DLID    LL  DPA+R+ A  AL H FF
Sbjct: 260 MELPQGQKRKVKERLKPYVKDPHALDLIDK---LLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  101 bits (254), Expect = 2e-24
 Identities = 91/359 (25%), Positives = 142/359 (39%), Gaps = 116/359 (32%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVL 142
           G+    ++ I+ ++GEGT+GQV +  D +  ELVA+K VR  N+ +E     A+ EI +L
Sbjct: 2   GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKIL 60

Query: 143 QRLAR----------------------------------HDIGG---TRYRSFPIDLVRE 165
           ++L                                    HD+ G   +    F  D ++ 
Sbjct: 61  RQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKS 120

Query: 166 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
             +QLLE + + H+   +H D+K  NILL                               
Sbjct: 121 FMKQLLEGLNYCHKKNFLHRDIKCSNILL---------------------------NNKG 153

Query: 226 AIKLIDFGSTTFEHQDHS--YV--VSTRHYRAPEVILGLGWNYPC-DLWSVGCILVELCS 280
            IKL DFG     + + S  Y   V T  YR PE++LG     P  D+WS GCIL EL +
Sbjct: 154 QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT 213

Query: 281 GEALFQTHENLEHLAMMERVLGP-----------LPHHMVIRADRRAEKYFRRGARLDWP 329
            + +FQ ++ L  L ++ R+ G            LP+   +    + +K +RR  R ++ 
Sbjct: 214 KKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTM----KPKKQYRRRLREEF- 268

Query: 330 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
                                            +DLL  +L  DP++R  A EAL  P+
Sbjct: 269 --------------------------SFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 98.5 bits (246), Expect = 2e-23
 Identities = 74/325 (22%), Positives = 119/325 (36%), Gaps = 104/325 (32%)

Query: 103 GTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHD--------- 149
           G +G+V         ++ AIK+++  +  R+      + E D+L + A+           
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQ-AQSPYVVKLYYSF 62

Query: 150 -------------IGGTRYR------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE 190
                         GG          S   D+ R    +++ ++ ++H   +IH DLKP+
Sbjct: 63  QGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPD 122

Query: 191 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRH 250
           NIL+ S  ++K+ D+      SK G   + +  +   K            +   +V T  
Sbjct: 123 NILIDSNGHLKLTDFGL----SKVGLVRRQINLNDDEK------------EDKRIVGTPD 166

Query: 251 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVI 310
           Y APEVILG G +   D WS+GCIL E   G   F                         
Sbjct: 167 YIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH------------------------ 202

Query: 311 RADRRAEKYFR--RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
                 E+ F+     +++WP+     D                        + IDL+  
Sbjct: 203 --GETPEEIFQNILNGKIEWPEDVEVSD------------------------EAIDLISK 236

Query: 369 LLRYDPAERLKAR---EALRHPFFT 390
           LL  DP +RL A+   E   HPFF 
Sbjct: 237 LLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 99.9 bits (249), Expect = 2e-23
 Identities = 93/335 (27%), Positives = 145/335 (43%), Gaps = 80/335 (23%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMI--EIDVLQRLARH- 148
           RY+I   +G+G++G V    D    E VAIK +  + ++  +A  I  EI +L RL RH 
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLL-RLLRHP 59

Query: 149 DIGGTRYRSFP--------IDLVRELGR-----------------------QLLESVAFM 177
           DI   ++   P        I +V EL                         QLL ++ ++
Sbjct: 60  DIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYI 119

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H   + H DLKP+NIL  +   +K+ D+  L+R +     F + P  +AI   D+     
Sbjct: 120 HTANVFHRDLKPKNILANADCKLKICDFG-LARVA-----FNDTP--TAIFWTDY----- 166

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLA 295
                   V+TR YRAPE+       Y    D+WS+GCI  E+ +G+ LF     +  L 
Sbjct: 167 --------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 218

Query: 296 MMERVLGPLPHHMVIRA-DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
           ++  +LG      + R  + +A +Y                 SMR      + P    Q 
Sbjct: 219 LITDLLGTPSPETISRVRNEKARRYL---------------SSMRK-----KQPVPFSQK 258

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             ++    + LL+ LL +DP +R  A EAL  P+F
Sbjct: 259 FPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 98.9 bits (247), Expect = 2e-23
 Identities = 87/365 (23%), Positives = 138/365 (37%), Gaps = 117/365 (32%)

Query: 93  RYRILSKMGEGTFGQVVECF--DNEKKELVAIKIVRSINK---------YREAAMI-EID 140
           +Y I   +G GT+G+V +    + +  +  AIK  +   +          RE A++ E+ 
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 141 -----VLQRL---------------ARHDIGG-------TRYRSFPIDLVRELGRQLLES 173
                 L  +               A HD+          +  S P  +V+ L  Q+L  
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNG 120

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           V ++H   ++H DLKP NIL++                  +G      P+   +K+ D G
Sbjct: 121 VHYLHSNWVLHRDLKPANILVMG-----------------EG------PERGVVKIGDLG 157

Query: 234 STTFEHQ------DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQ 286
                +       D   VV T  YRAPE++LG   +    D+W++GCI  EL + E +F+
Sbjct: 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK 217

Query: 287 THE------NLEHLAMMER---VLGP-----------LPHHMVIRADRRAEKYFRRGARL 326
             E      N      +ER   VLG            +P +  +  D + + Y       
Sbjct: 218 GREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY------- 270

Query: 327 DWPDGATSRDSMRAVWKLLRLPNLI--MQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
                                 +L   M+          DLL+ LL YDP +R+ A EAL
Sbjct: 271 -------------------PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL 311

Query: 385 RHPFF 389
            HP+F
Sbjct: 312 EHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 97.2 bits (243), Expect = 3e-23
 Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 115/335 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y I+ ++G+G+FG+V         +L  +K +   N   K RE A+ E+ +L++L  H 
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHP 59

Query: 150 ----------------I------GGT----------RYRSFPIDLVRELGRQLLESVAFM 177
                           I      GG             + FP + + +   QL  ++ ++
Sbjct: 60  NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL 119

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H  +++H D+KP+NI L                 + +G           +KL DFG S  
Sbjct: 120 HSRKILHRDIKPQNIFL-----------------TSNGL----------VKLGDFGISKV 152

Query: 237 FEH-QDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
                D +  VV T +Y +PE+     +NY  D+WS+GC+L ELC+ +  F+  ENL  L
Sbjct: 153 LSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE-GENLLEL 211

Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
           A+            +++                                   +P+     
Sbjct: 212 AL-----------KILKGQYPP------------------------------IPS----- 225

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               + +L +L+  LL+ DP ER    + L+ PF 
Sbjct: 226 --QYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 97.5 bits (243), Expect = 5e-23
 Identities = 89/344 (25%), Positives = 138/344 (40%), Gaps = 107/344 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIE------ 138
           +Y  L K+GEGT+G V +  + E  E+VA+K VR          +  RE  +++      
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60

Query: 139 ----IDVL--------------QRLARH--DIGGTRYRSFPIDLVRELGRQLLESVAFMH 178
                DVL              Q L ++     G         +V+    QLL+ +AF H
Sbjct: 61  IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPE----IVKSFMFQLLKGLAFCH 116

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 235
              ++H DLKP+N+L+                 +K+G           +KL DFG   + 
Sbjct: 117 SHNVLHRDLKPQNLLI-----------------NKNGE----------LKLADFGLARAF 149

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEH 293
               + +S  V T  YR P+V+ G   ++   D+WS GCI  EL  +G  LF  ++  + 
Sbjct: 150 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 209

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
           L  + R+L                             G  + +S   V KL       M 
Sbjct: 210 LKRIFRLL-----------------------------GTPTEESWPGVSKLPDYKPYPMY 240

Query: 354 HVDHSAGDLI--------DLLQGLLRYDPAERLKAREALRHPFF 389
               S  +++        DLLQ LL  +P +R+ A EAL+HP+F
Sbjct: 241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 97.0 bits (241), Expect = 2e-22
 Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 85/336 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMI------- 137
           RY+ L+ +G G +G V   +D   ++ VA+K        ++ +   YRE  ++       
Sbjct: 16  RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHEN 75

Query: 138 ------------------EIDVLQRLARHDIGG-TRYRSFPIDLVRELGRQLLESVAFMH 178
                             E+ ++  L   D+    + +    + V+ L  QLL  + ++H
Sbjct: 76  VIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIH 135

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+ +                            +   ++++DFG     
Sbjct: 136 SAGIIHRDLKPSNVAV---------------------------NEDCELRILDFGLARQA 168

Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M 296
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF  ++ ++ L  +
Sbjct: 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRI 228

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           ME V  P P  +   +   A KY +                      L  +P   ++ + 
Sbjct: 229 MEVVGTPSPEVLKKISSEHARKYIQ---------------------SLPHMPQQDLKKIF 267

Query: 357 HSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
             A  L IDLL+ +L  D  +R+ A EAL HP+F++
Sbjct: 268 RGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 95.9 bits (238), Expect = 5e-22
 Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 83/335 (24%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 18  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 77

Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 78  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 137

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+ +                            +   +K++DFG     
Sbjct: 138 SADIIHRDLKPSNLAV---------------------------NEDCELKILDFGLARHT 170

Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 171 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 230

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G     ++ +    + + +                    +  L ++P +   +V  
Sbjct: 231 LRLVGTPGAELLKKISSESARNY--------------------IQSLTQMPKMNFANVFI 270

Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 271 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 95.7 bits (238), Expect = 5e-22
 Identities = 86/333 (25%), Positives = 133/333 (39%), Gaps = 84/333 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK-------YREAAMIE------ 138
           RY  L ++G G +G V    D    E VAIK + R           YRE  +++      
Sbjct: 16  RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHEN 75

Query: 139 -IDVLQRLA------------------RHDIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
            I +L                      + D+          D V+ L  Q+L  + ++H 
Sbjct: 76  VIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHS 135

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             +IH DLKP N+ +                            +   +K++DFG      
Sbjct: 136 AGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLARHAD 168

Query: 240 QDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
            + +  V TR YRAPEVIL  + +N   D+WSVGCI+ E+ +G+ LF+  + L+ L  + 
Sbjct: 169 AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 228

Query: 299 RVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
           +V G P P  +    D+ A+ Y +                      L + P      +  
Sbjct: 229 KVTGVPGPEFVQKLEDKAAKSYIK---------------------SLPKYPRKDFSTLFP 267

Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFF 389
            A    +DLL+ +L  D  +RL A EAL HP+F
Sbjct: 268 KASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 95.8 bits (239), Expect = 5e-22
 Identities = 83/342 (24%), Positives = 138/342 (40%), Gaps = 101/342 (29%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +GQV   FD +    VAIK         + +   YRE  +++      
Sbjct: 16  RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHEN 75

Query: 139 ----IDVLQR---------------LARHDIGGT-RYRSFPIDLVRELGRQLLESVAFMH 178
               +DV                  L   D+    + +    D ++ L  Q+L  + ++H
Sbjct: 76  VIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIH 135

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 235
              +IH DLKP NI                            + +   +K++DFG    T
Sbjct: 136 SAGIIHRDLKPSNI---------------------------AVNEDCELKILDFGLARHT 168

Query: 236 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
             E   +   V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G+ LF   ++++ L
Sbjct: 169 DDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQL 225

Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
             +  ++G     ++ +    + + + +                        LP   M  
Sbjct: 226 KRIMNLVGTPDEELLQKISSESARNYIQS-----------------------LP--QMPK 260

Query: 355 VD-------HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            D        +    IDLL+ +L  DP +R+ A EAL HP+ 
Sbjct: 261 KDFKEVFSGANP-LAIDLLEKMLVLDPDKRITAAEALAHPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 95.8 bits (239), Expect = 5e-22
 Identities = 80/335 (23%), Positives = 124/335 (37%), Gaps = 86/335 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAA-MIEIDVLQRLARH 148
            + ++  +G G FG+V    D +  ++ A+K++R    I + + A    E D+L      
Sbjct: 2   DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSP 61

Query: 149 DI---------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
            I                     GG       R   FP +  R    +L+ ++  +H+L 
Sbjct: 62  WIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSR--SSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
            IH D+KP+NIL+ +  ++K+ D+    +   +KD  Y+ N   +   +           
Sbjct: 122 FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHK 181

Query: 240 QDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           Q        V T  Y APEV+ G  +   CD WS+G IL E+  G   F           
Sbjct: 182 QRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY---------- 231

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLIMQHV 355
                          +D   E Y +                +   WK  LR P       
Sbjct: 232 ---------------SDTLQETYNK---------------IIN--WKESLRFP----PDP 255

Query: 356 DHSAGDLIDLLQGLLRYDPAERLK-AREALRHPFF 389
             S  + IDL+  LL  DP +RL    E   HPFF
Sbjct: 256 PVSP-EAIDLICRLLC-DPEDRLGSFEEIKSHPFF 288

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 94.7 bits (235), Expect = 6e-22
 Identities = 89/328 (27%), Positives = 139/328 (42%), Gaps = 78/328 (23%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLAR-- 147
           Y  L K+GEGT+  V +      + LVA+K +R   ++ E A    + E+ +L+ L    
Sbjct: 7   YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL--EHEEGAPCTAIREVSLLKNLKHAN 64

Query: 148 ----HDIGGTRY------RSFPIDLVRELGR---------------QLLESVAFMHELRL 182
               HDI  T             DL + L                 QLL  +++ H+ ++
Sbjct: 65  IVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI 124

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+     +K+ D+  L+R+       K++P  +                +
Sbjct: 125 LHRDLKPQNLLINEKGELKLADFG-LARA-------KSVPTKT----------------Y 160

Query: 243 SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           S  V T  YR P+V+LG   ++ P D+W VGCIL E+ +G  +F      E L ++ R+L
Sbjct: 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLL 220

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
           G                         WP G TS +  R+          ++ H      D
Sbjct: 221 GTPTEE-------------------TWP-GITSNEEFRSYLFPQYRAQPLINHAPRLDTD 260

Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFF 389
            IDLL  LL Y+   R+ A  ALRH +F
Sbjct: 261 GIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 94.1 bits (234), Expect = 8e-22
 Identities = 89/345 (25%), Positives = 150/345 (43%), Gaps = 99/345 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLAR- 147
           +Y  + K+GEGT+G V +  D    E +A+K +R + +  E     A+ EI +L+ +   
Sbjct: 3   QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEMQHG 61

Query: 148 -----HDIGGTRYRSFPI------DLVRELGR----------------QLLESVAFMHEL 180
                 D+  +  R + +      DL + +                  Q+L  +A+ H  
Sbjct: 62  NIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH 121

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST----- 235
           R++H DLKP+N+L              + R             ++A+KL DFG       
Sbjct: 122 RVLHRDLKPQNLL--------------IDRR------------TNALKLADFGLARAFGI 155

Query: 236 ---TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
              TF H+     V T  YRAPE++LG   ++ P D+WSVGCI  E+ + + LF     +
Sbjct: 156 PVRTFTHE-----VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI 210

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL- 350
           + L  + R+LG                         WP G TS    ++ +      +L 
Sbjct: 211 DELFKIFRILGTPNEET-------------------WP-GVTSLPDYKSAFPKWPPKDLA 250

Query: 351 -IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
            ++  ++ +    +DLL  +LR DP++R+ AR AL H +F +D+ 
Sbjct: 251 TVVPTLEPAG---VDLLSKMLRLDPSKRITARAALEHEYF-KDLG 291

Length = 294

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 93.8 bits (234), Expect = 1e-21
 Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 109/331 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y+ L K+GEG  G+V +  D    + VAIK +R   + +E  + EI +++     +I   
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI-VD 79

Query: 154 RYRSFPID----LVREL---G----------------------RQLLESVAFMHELRLIH 184
            Y S+ +     +V E    G                      R++L+ + ++H   +IH
Sbjct: 80  YYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIH 139

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEHQD 241
            D+K +NILL                 SKDGS          +KL DFG     T E   
Sbjct: 140 RDIKSDNILL-----------------SKDGS----------VKLADFGFAAQLTKEKSK 172

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
            + VV T ++ APEVI    +    D+WS+G + +E+  GE                   
Sbjct: 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE------------------- 213

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-MRAVWKLLRLPNLIMQHVDHSAG 360
              P ++                          R+  +RA++ +       +++ +  + 
Sbjct: 214 ---PPYL--------------------------REPPLRALFLITTKGIPPLKNPEKWSP 244

Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           +  D L   L  DP +R  A E L+HPF  +
Sbjct: 245 EFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 92.0 bits (229), Expect = 3e-21
 Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 73/252 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARH 148
           R++  +K+G GTFG+V    + +  EL+A+K +R I       +     E+ VL+ L   
Sbjct: 1   RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIR-IQDNDPKTIKEIADEMKVLELLKHP 59

Query: 149 DI---------------------GGT-----RY-RSFPIDLVRELGRQLLESVAFMHELR 181
           ++                     GGT      + R     ++R    QLLE +A++H   
Sbjct: 60  NLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG 119

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS------- 234
           ++H D+KP NI L                             +  IKL DFG        
Sbjct: 120 IVHRDIKPANIFLD---------------------------HNGVIKLGDFGCAVKLKNN 152

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSG----EALFQT 287
           TT   ++   +  T  Y APEVI G    G     D+WS+GC+++E+ +G      L   
Sbjct: 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212

Query: 288 HENLEHLAMMER 299
            + + H+    +
Sbjct: 213 FQIMFHVGAGHK 224

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 83/332 (25%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLAR--- 147
           Y+ L K+GEG++  V +       +LVA+K +R +     A   A+ E  +L+ L     
Sbjct: 7   YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIR-LEHEEGAPFTAIREASLLKDLKHANI 65

Query: 148 ---HDIGGTRYRSFPI-------DL---------------VRELGRQLLESVAFMHELRL 182
              HDI  T+ ++  +       DL               VR    QLL  +A+ H+ R+
Sbjct: 66  VTLHDIIHTK-KTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRV 124

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+     +K+ D+  L+R+       K++P           S T+ ++  
Sbjct: 125 LHRDLKPQNLLISERGELKLADFG-LARA-------KSVP-----------SKTYSNE-- 163

Query: 243 SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN-LEHLAMMERV 300
              V T  YR P+V+LG   ++   D+W VGCI  E+ +G  LF    +  + L  + RV
Sbjct: 164 ---VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRV 220

Query: 301 LG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-- 357
           LG P                        WP G +S    +        P  ++ H     
Sbjct: 221 LGTPTEE--------------------TWP-GVSSNPEFKPYSFPFYPPRPLINHAPRLD 259

Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                 +L    L+Y+P +R+ A EA++HP+F
Sbjct: 260 RIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 91.2 bits (227), Expect = 5e-21
 Identities = 65/223 (29%), Positives = 95/223 (42%), Gaps = 62/223 (27%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLARHD 149
            Y++   +G G FG V +  + E  + VAIK +       EA    M EID+L+ L   +
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 150 I---------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRL 182
           I                      G+      ++  FP  LV     Q+L+ +A++HE  +
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT----FE 238
           IH D+K  NIL                  +KDG           +KL DFG  T      
Sbjct: 121 IHRDIKAANILT-----------------TKDGV----------VKLADFGVATKLNDVS 153

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
             D S VV T ++ APEVI   G +   D+WS+GC ++EL +G
Sbjct: 154 KDDAS-VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 92.9 bits (231), Expect = 6e-21
 Identities = 93/356 (26%), Positives = 137/356 (38%), Gaps = 92/356 (25%)

Query: 81  HYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSIN 129
            Y   +G++   +  RY+ L  +G G  G V   +D    + VAIK        +  +  
Sbjct: 2   FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKR 61

Query: 130 KYREAAMIEIDVLQRLARH-DIGG-----TRYRSFP----IDLVRELGR----------- 168
            YRE       VL +L  H +I G     T  +S      + LV EL             
Sbjct: 62  AYREL------VLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDL 115

Query: 169 ----------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
                     Q+L  +  +H   +IH DLKP NI++ S                      
Sbjct: 116 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---------------------- 153

Query: 219 KNLPKSSAIKLIDFG-----STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
                   +K++DFG      T+F      YVV TR+YRAPEVILG+G+    D+WSVGC
Sbjct: 154 -----DCTLKILDFGLARTAGTSFMMTP--YVV-TRYYRAPEVILGMGYKENVDIWSVGC 205

Query: 274 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR-RGARLDWPDGA 332
           I+ E+  G  LF   ++++    +   LG      + R       Y   R     +    
Sbjct: 206 IMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEE 265

Query: 333 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
              D +         P     H    A    DLL  +L  DP +R+   +AL+HP+
Sbjct: 266 LFPDVL--------FPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 92.1 bits (229), Expect = 8e-21
 Identities = 87/350 (24%), Positives = 144/350 (41%), Gaps = 93/350 (26%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLAR 147
           +L  RY  L  +G G+ G V    D++  + VA+K IV +  +  + A+ EI +++RL  
Sbjct: 2   DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH 61

Query: 148 HDI---------GGTR----------YRSFPI-------DLVR--ELGR----------- 168
            +I          G+             S  I       DL    E G            
Sbjct: 62  DNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMY 121

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           QLL  + ++H   ++H DLKP N+ + + + V                          +K
Sbjct: 122 QLLRGLKYIHSANVLHRDLKPANVFINTEDLV--------------------------LK 155

Query: 229 LIDFG-----STTFEHQDH-SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG 281
           + DFG        + H+ + S  + T+ YR+P ++L    +    D+W+ GCI  E+ +G
Sbjct: 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 215

Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + LF     LE    M+ +L  +P   V+R + R E            DG   R  +R +
Sbjct: 216 KPLFAGAHELE---QMQLILESVP---VVREEDRNE-LLNVIPSFVRNDGGEPRRPLRDL 268

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                LP      V+  A   +D L+ +L ++P +RL A EAL HP+ + 
Sbjct: 269 -----LPG-----VNPEA---LDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 91.2 bits (226), Expect = 8e-21
 Identities = 84/337 (24%), Positives = 128/337 (37%), Gaps = 89/337 (26%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMI------- 137
           +Y  ++++G G +G V +  D      VA+K VR         ++  RE A++       
Sbjct: 1   QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFD 60

Query: 138 ------------------EIDVLQRLARHDIGGTRYRS------FPIDLVRELGRQLLES 173
                             E  V       D     Y         P + +++L RQ L  
Sbjct: 61  HPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRG 120

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + F+H   ++H DLKPENIL+ S   VK+ D+      ++  S                 
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQVKLADFGL----ARIYSC---------------- 160

Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                    + VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + 
Sbjct: 161 -----QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 215

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNLIM 352
           L  +  ++G LP                     DWP D    R +        R P  + 
Sbjct: 216 LGKIFDLIG-LP------------------PEDDWPRDVTLPRGAFSP-----RGPRPVQ 251

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             V         LL  +L ++P +R+ A  AL+HPFF
Sbjct: 252 SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 90.4 bits (224), Expect = 3e-20
 Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 85/334 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD 149
           RYR L ++G G +G V    D      VAIK + R      + + A  E+ +L+ + +H+
Sbjct: 16  RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHE 74

Query: 150 --IG------------------------GT------RYRSFPIDLVRELGRQLLESVAFM 177
             IG                        GT      ++     D ++ L  Q+L+ + ++
Sbjct: 75  NVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYI 134

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H   +IH DLKP N L V+ +                            +K++DFG    
Sbjct: 135 HAAGIIHRDLKPGN-LAVNED--------------------------CELKILDFGLARQ 167

Query: 238 EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
              + +  V TR YRAPEVIL  + +    D+WSVGCI+ E+ +G+ LF+ H++L+ L  
Sbjct: 168 TDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLME 227

Query: 297 MERVLGPLPHHMVIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           + +V G      V +     A+ Y ++  R    D  +                 ++ + 
Sbjct: 228 IMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRS-----------------LLPNA 270

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           +  A   +++L+ +L  D   R+ A EAL HP+F
Sbjct: 271 NPLA---VNVLEKMLVLDAESRITAAEALAHPYF 301

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 90.2 bits (224), Expect = 6e-20
 Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 59/287 (20%)

Query: 111 CFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRYRSFPI--DLVREL 166
           CF      L A+ I++   I+ + E     I V+  L + D+        P+  D V+  
Sbjct: 54  CFFKHDNVLSALDILQPPHIDPFEE-----IYVVTELMQSDLHKIIVSPQPLSSDHVKVF 108

Query: 167 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
             Q+L  + ++H   ++H D+KP N+L+ S                           +  
Sbjct: 109 LYQILRGLKYLHSAGILHRDIKPGNLLVNS---------------------------NCV 141

Query: 227 IKLIDFGSTTFEHQDHSYV----VSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSG 281
           +K+ DFG    E  D S      V T++YRAPE+++G   +    D+WSVGCI  EL   
Sbjct: 142 LKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGR 201

Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
             LFQ    ++ L ++  +LG      +  A   A  +  RG     P    S   +   
Sbjct: 202 RILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG-----PHKPPSLPVLY-- 254

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
                    +     H A   + LL  +L +DP +R+ A +AL HP+
Sbjct: 255 --------TLSSQATHEA---VHLLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 89.3 bits (221), Expect = 2e-19
 Identities = 88/346 (25%), Positives = 143/346 (41%), Gaps = 92/346 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI---------------- 137
           Y++ + +G G+FG V E    +  E VAIK V    +Y+   ++                
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDY 127

Query: 138 ---------EIDVLQRLARHDIGGTRYR----------SFPIDLVRELGRQLLESVAFMH 178
                    E ++   +    I  T ++          + P+ LV+    QL  ++A++H
Sbjct: 128 YYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 236
              + H DLKP+N+L+                           P +  +KL DFGS    
Sbjct: 188 SKFICHRDLKPQNLLID--------------------------PNTHTLKLCDFGSAKNL 221

Query: 237 -FEHQDHSYVVSTRHYRAPEVILGLGWNYPC--DLWSVGCILVELCSGEALFQTHENLEH 293
               +  SY+ S R YRAPE++LG   NY    DLWS+GCI+ E+  G  +F    +++ 
Sbjct: 222 LAGQRSVSYICS-RFYRAPELMLG-ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ 279

Query: 294 LAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
           L  + +VLG P    +       A+  F        PD    +D ++ V+          
Sbjct: 280 LVRIIQVLGTPTEDQLKEMNPNYADIKF--------PD-VKPKD-LKKVFP--------- 320

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
                +  D I+ +   L+Y+P +RL   EAL  PFF  D+R P +
Sbjct: 321 ---KGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD-DLRDPCI 362

Length = 440

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 88.0 bits (218), Expect = 2e-19
 Identities = 85/334 (25%), Positives = 139/334 (41%), Gaps = 86/334 (25%)

Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQR 144
           +T RY  L  +G G FG V    D    + VAIK  + +  +    +      E+ +L+ 
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIK--KIMKPFSTPVLAKRTYRELKLLKH 65

Query: 145 LARHD--IGGTRYRSFP---IDLVREL----------------------GRQLLESVAFM 177
           L RH+  I  +     P   I  V EL                        Q+L  + ++
Sbjct: 66  L-RHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYV 124

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H   ++H DLKP NIL+                            ++  +K+ DFG +  
Sbjct: 125 HSAGVVHRDLKPSNILI---------------------------NENCDLKICDFGLARI 157

Query: 237 FEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
            + Q   YV STR+YRAPE++L    ++   D+WS GCI  E+  G+ LF   +++   +
Sbjct: 158 QDPQMTGYV-STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFS 216

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLIMQH 354
           ++  +LG  P  ++                        S +++R V  L  R P    + 
Sbjct: 217 IITDLLGTPPDDVINTI--------------------CSENTLRFVQSLPKREPVPFSEK 256

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
             ++    IDLL+ +L +DP +R+ A EAL HP+
Sbjct: 257 FKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 85.7 bits (213), Expect = 4e-19
 Identities = 73/326 (22%), Positives = 121/326 (37%), Gaps = 109/326 (33%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRYR 156
           G G FG+V       K    A+K V  R I +  +   I  E ++L+    H      YR
Sbjct: 2   GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILE-ECNHPFIVKLYR 60

Query: 157 SFP-----------------IDLVRELGR-----------QLLESVAFMHELRLIHTDLK 188
           +F                    ++R+ G             ++ +  ++H   +I+ DLK
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
           PEN+LL S  YVK+ D+ F                    K +  G  T+          T
Sbjct: 121 PENLLLDSNGYVKLVDFGF-------------------AKKLKSGQKTWT------FCGT 155

Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 308
             Y APE+IL  G+++  D WS+G +L EL +G   F   ++ + + +   +L       
Sbjct: 156 PEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE-DDEDPMEIYNDIL------- 207

Query: 309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
                       +   +L++P                        ++D +A DLI     
Sbjct: 208 ------------KGNGKLEFP-----------------------NYIDKAAKDLIK---Q 229

Query: 369 LLRYDPAERL-----KAREALRHPFF 389
           LLR +P ERL       ++  +H +F
Sbjct: 230 LLRRNPEERLGNLKGGIKDIKKHKWF 255

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 87.0 bits (215), Expect = 7e-19
 Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 47/229 (20%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++                
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA---------------- 173

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                 T F      YVV TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  
Sbjct: 174 -----CTNFMMT--PYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD-------WPDGATSRDSMRAV 341
           ++++    +   LG      + R       Y     +         +PD     +S    
Sbjct: 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSES---- 281

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +          DLL  +L  DP +R+   EALRHP+ T
Sbjct: 282 -----------ERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 86.7 bits (215), Expect = 7e-19
 Identities = 85/338 (25%), Positives = 140/338 (41%), Gaps = 82/338 (24%)

Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA--AMIEIDVLQRLA 146
           +  +Y  +  +G G +G V    ++E  E VAIK I  + +   +A   + EI +L R  
Sbjct: 3   VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLL-RHL 61

Query: 147 RHD--------IGGTRYRSFP-IDLVRELGR-----------------------QLLESV 174
            H+        +      +F  + +V EL                         QLL  +
Sbjct: 62  DHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGL 121

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++H   ++H DLKP N+LL +   +K+ D+  L+R++ +   F                
Sbjct: 122 KYIHSANVLHRDLKPSNLLLNANCDLKICDFG-LARTTSEKGDFMT-------------- 166

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                    YVV TR YRAPE++L    +    D+WSVGCI  EL   + LF   + +  
Sbjct: 167 --------EYVV-TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ 217

Query: 294 LAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
           L ++  +LG P    +    + +A +Y R           T R S   ++          
Sbjct: 218 LKLITELLGSPSEEDLGFIRNEKARRYIRSLPY-------TPRQSFARLFP--------- 261

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
               H+    IDLL+ +L +DP++R+   EAL HP+  
Sbjct: 262 ----HANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 71/335 (21%), Positives = 118/335 (35%), Gaps = 116/335 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARH 148
            + +L  +G+G+FG+V +  D    ++VAIK++       E A  EI+ +Q+    L++ 
Sbjct: 2   LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFLSQC 56

Query: 149 DI------------------------GGT-----RYRSFPIDLVRELGRQLLESVAFMHE 179
                                     GG+     +        +  + R++L  + ++HE
Sbjct: 57  RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHE 116

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---T 236
              IH D+K  NILL                 S++G           +KL DFG +   T
Sbjct: 117 EGKIHRDIKAANILL-----------------SEEGD----------VKLADFGVSGQLT 149

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                 +  V T  + APEVI   G++   D+WS+G   +EL  GE              
Sbjct: 150 STMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP------------- 196

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                 PL                                 MR ++ + +     ++   
Sbjct: 197 ------PLSDL----------------------------HPMRVLFLIPKNNPPSLEGNK 222

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            S     D +   L  DP ER  A+E L+H F  +
Sbjct: 223 FSK-PFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 83.7 bits (207), Expect = 2e-18
 Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 67/252 (26%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHD 149
            +++L K+G+G++G V +       +  A+K V   S++ K RE A+ EI +L  +   +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 150 I-------------------------------GGTRYRSFPIDLVRELGRQLLESVAFMH 178
           I                                  + +  P   +  +  QLL  +  +H
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           E +++H DLK  NILLV+ + VK+ D   +S+  K     KN+ K+              
Sbjct: 121 EQKILHRDLKSANILLVANDLVKIGDLG-ISKVLK-----KNMAKT-------------- 160

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
                  + T HY APEV  G  ++Y  D+WS+GC+L E+ +    F+   +++ L    
Sbjct: 161 ------QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEA-RSMQDLRY-- 211

Query: 299 RVLG----PLPH 306
           +V      P+P 
Sbjct: 212 KVQRGKYPPIPP 223

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 84.8 bits (210), Expect = 3e-18
 Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 62/235 (26%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  + ++H   ++H DLKP N+L+ +   +K+ D+  L+R       F   P  +A  
Sbjct: 113 QILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFG-LARG------FSENPGENAGF 165

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPC----DLWSVGCILVELCSGEAL 284
           + ++             V+TR YRAPE++L            D+WSVGCIL EL   + +
Sbjct: 166 MTEY-------------VATRWYRAPEIMLS---FQSYTKAIDVWSVGCILAELLGRKPV 209

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 343
           F+  + ++ L  + +VLG      + R    +A+ Y R                      
Sbjct: 210 FKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR---------------------- 247

Query: 344 LLRLPNL-------IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
              LPN+       I  + +  A   +DLL+ LL +DP +R+   EAL HP+   
Sbjct: 248 --SLPNIPKKPFESIFPNANPLA---LDLLEKLLAFDPTKRISVEEALEHPYLAI 297

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 83.9 bits (207), Expect = 4e-18
 Identities = 82/328 (25%), Positives = 136/328 (41%), Gaps = 78/328 (23%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLAR-- 147
           Y  L K+GEGT+  V +        LVA+K +R   ++ E A    + E+ +L+ L    
Sbjct: 8   YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRL--EHEEGAPCTAIREVSLLKDLKHAN 65

Query: 148 ----HDIGGTR------YRSFPIDLVRELGR---------------QLLESVAFMHELRL 182
               HDI  T       +     DL + L                 QLL  + + H  ++
Sbjct: 66  IVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV 125

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+     +K+ D+  L+R+       K++P  +                +
Sbjct: 126 LHRDLKPQNLLINERGELKLADFG-LARA-------KSIPTKT----------------Y 161

Query: 243 SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           S  V T  YR P+++LG   ++   D+W VGCI  E+ +G  LF      E L  + R+L
Sbjct: 162 SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRIL 221

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
           G                         WP G  S +  ++        + +  H      D
Sbjct: 222 GTPTEET-------------------WP-GILSNEEFKSYNYPKYRADCLHNHAPRLDSD 261

Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFF 389
             +LL  LL+++  +R+ A EA++HP+F
Sbjct: 262 GAELLSKLLQFEGRKRISAEEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 83.1 bits (205), Expect = 7e-18
 Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 50/232 (21%)

Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           P + ++++  QLL  + F+H  R++H DLKP+NIL+ S+  +K+ D+             
Sbjct: 108 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL----------- 156

Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                    ++  F          + VV T  YRAPEV+L   +  P DLWSVGCI  E+
Sbjct: 157 --------ARIYSFQMAL------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 202

Query: 279 CSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 337
              + LF+   +++ L  +  V+G P                       DWP        
Sbjct: 203 FRRKPLFRGSSDVDQLGKILDVIGLPGEE--------------------DWPRDVALPRQ 242

Query: 338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                    +   +    +       DLL   L ++PA+R+ A  AL HP+F
Sbjct: 243 AFHSKSAQPIEKFVTDIDELGK----DLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 82.5 bits (204), Expect = 7e-18
 Identities = 72/325 (22%), Positives = 116/325 (35%), Gaps = 111/325 (34%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------EIDVLQRLARHDI--- 150
           +G G+FG V E  + +  +  A+K V   +  +           EI +L +L   +I   
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 151 ------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTD 186
                             GG+      +Y SFP  ++R   RQ+L  + ++H+   +H D
Sbjct: 68  LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRD 127

Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQDHSY 244
           +K  NIL+                   +G           +KL DFG      E      
Sbjct: 128 IKGANILV-----------------DTNG----------VVKLADFGMAKQVVEFSFAKS 160

Query: 245 VVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
              + ++ APEVI   G +    D+WS+GC ++E+ +G+  +     LE +A +      
Sbjct: 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWS---QLEGVAAV------ 211

Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
                           F+ G   + P                     I  H+   A D I
Sbjct: 212 ----------------FKIGRSKELP--------------------PIPDHLSDEAKDFI 235

Query: 364 DLLQGLLRYDPAERLKAREALRHPF 388
                 L+ DP+ R  A E L HPF
Sbjct: 236 LK---CLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 82.3 bits (204), Expect = 8e-18
 Identities = 65/329 (19%), Positives = 117/329 (35%), Gaps = 109/329 (33%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKI--VRSINKYREAAMIEIDVLQRLARHDI-- 150
             +  +G+G+ G V +       ++ A+K   V    ++R+  + E+  L+      +  
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVK 63

Query: 151 -------------------GGT------RYRSFPIDLVRELGRQLLESVAFMH-ELRLIH 184
                              GG+      +    P  ++  + RQ+L+ + ++H +  +IH
Sbjct: 64  CYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIH 123

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH---Q 240
            D+KP N+L+                 +  G           +K+ DFG S   E+   Q
Sbjct: 124 RDIKPSNLLI-----------------NSKGE----------VKIADFGISKVLENTLDQ 156

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
            +++V  T  Y +PE I G  ++Y  D+WS+G  L+E   G+  F          +M+ +
Sbjct: 157 CNTFV-GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI 215

Query: 301 L-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
             GP P                       P    S                         
Sbjct: 216 CDGPPP---------------------SLPAEEFSP------------------------ 230

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPF 388
            +  D +   L+ DP +R  A E L+HPF
Sbjct: 231 -EFRDFISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 82.8 bits (205), Expect = 1e-17
 Identities = 84/339 (24%), Positives = 126/339 (37%), Gaps = 120/339 (35%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKI-----VRSINKYREAAMIEIDVLQR---- 144
           ++IL+++G+G +GQV      +  E+VA+K      +  +N+ R   + E D+L      
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHV-LTERDILTTTKSE 61

Query: 145 ----------------LARHDIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELR 181
                           LA   + G  +R+   +L        R    ++ E+V  +HEL 
Sbjct: 62  WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
            IH DLKPEN L+                    G           IKL DFG S      
Sbjct: 122 YIHRDLKPENFLI-----------------DASGH----------IKLTDFGLSKGIVTY 154

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE-LC-----SGEALFQTHENLEHL 294
            +S VV +  Y APEV+ G G+++  D WS+GC+L E LC     SG    +T ENL++ 
Sbjct: 155 ANS-VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW 213

Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV-WKLLRLPNLIMQ 353
                                          L  P     R ++    W L+    LI  
Sbjct: 214 KET----------------------------LQRPVYDDPRFNLSDEAWDLIT--KLIN- 242

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALR-HPFFTR 391
                              DP+ R  + E ++ HPFF  
Sbjct: 243 -------------------DPSRRFGSLEDIKNHPFFKE 262

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 82.8 bits (204), Expect = 2e-17
 Identities = 70/227 (30%), Positives = 104/227 (45%), Gaps = 47/227 (20%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 177

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221

Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
                      +H    A    DLL  +L  DPA+R+   EAL+HP+
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 61/221 (27%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + IL K+GEG++G V +    E  ++VAIK+V  + +  +  + EI +L++         
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVV-PVEEDLQEIIKEISILKQ-CDSPYIVK 62

Query: 154 RYRSF-----------------PIDLVRELGRQL------------LESVAFMHELRLIH 184
            Y S+                   D+++   + L            L+ + ++H  + IH
Sbjct: 63  YYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIH 122

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH--QD 241
            D+K  NILL                 +++G            KL DFG S         
Sbjct: 123 RDIKAGNILL-----------------NEEG----------QAKLADFGVSGQLTDTMAK 155

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
            + V+ T  + APEVI  +G+N   D+WS+G   +E+  G+
Sbjct: 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 81.6 bits (201), Expect = 2e-17
 Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 79/330 (23%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIE-IDVLQRL 145
           Y  L K+GEG++  V +       +LVA+K++             REA++++ +     +
Sbjct: 7   YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIV 66

Query: 146 ARHDIGGTR------YRSFPIDL---------------VRELGRQLLESVAFMHELRLIH 184
             HDI  T+      +     DL               VR    QLL  +A++H   ++H
Sbjct: 67  LLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILH 126

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEHQD 241
            DLKP+N+L+                     SY   L      KL DFG   + +   Q 
Sbjct: 127 RDLKPQNLLI---------------------SYLGEL------KLADFGLARAKSIPSQT 159

Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ-THENLEHLAMMER 299
           +S  V T  YR P+V+LG   ++   D+W  GCI +E+  G+  F    +  E L  +  
Sbjct: 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT 219

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG +P         +   Y     + +W      +  +R VWK L  P           
Sbjct: 220 VLG-VPTEDTWPGVSKLPNY-----KPEWFLPCKPQ-QLRVVWKRLSRPP---------- 262

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               DL   +L   P +R+ A++AL HP+F
Sbjct: 263 -KAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 82.4 bits (203), Expect = 2e-17
 Identities = 94/358 (26%), Positives = 145/358 (40%), Gaps = 83/358 (23%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----- 125
           R    +  Y   IG++   +  RY+ L  +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62

Query: 126 ---RSINKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFP 159
               +   YRE  +++                        DV   +   D    +     
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME 122

Query: 160 IDLVRE--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           +D  R   L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTS 179

Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
           F   P                     YVV TR+YRAPEVILG+G+    D+WSVGCI+ E
Sbjct: 180 FMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGE 217

Query: 278 LCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPD 330
           +  G  LF   ++++    ++E++  P P  M      V        KY        +PD
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277

Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
                DS               +H    A    DLL  +L  D ++R+   EAL+HP+
Sbjct: 278 VLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 81.2 bits (200), Expect = 4e-17
 Identities = 84/328 (25%), Positives = 139/328 (42%), Gaps = 78/328 (23%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLAR-- 147
           Y  L K+GEGT+  V +      + LVA+K +R   ++ E A    + E+ +L+ L    
Sbjct: 8   YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRL--EHEEGAPCTAIREVSLLKDLKHAN 65

Query: 148 ----HDIGGTR------YRSFPIDL---------------VRELGRQLLESVAFMHELRL 182
               HDI  T       +     DL               V+    Q+L  +A+ H  ++
Sbjct: 66  IVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV 125

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+     +K+ D+  L+R+       K++P  +                +
Sbjct: 126 LHRDLKPQNLLINERGELKLADFG-LARA-------KSVPTKT----------------Y 161

Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           S  V T  YR P+V+LG   ++   D+W VGCI  E+ SG  LF      + L ++ R+L
Sbjct: 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLL 221

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
           G                         WP G +S D  +        P  ++ H      +
Sbjct: 222 GT-------------------PTEETWP-GISSNDEFKNYNFPKYKPQPLINHAPRLDTE 261

Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFF 389
            I+LL   L+Y+  +R+ A EA++H +F
Sbjct: 262 GIELLTKFLQYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 77.4 bits (190), Expect = 7e-16
 Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 87/335 (25%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIE-IDVLQRL 145
           Y  L K+GEG++  V +       +LVA+K++R            REA++++ +     +
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIV 66

Query: 146 ARHDIGGTR------YRSFPIDLVRELGR---------------QLLESVAFMHELRLIH 184
             HDI  T+      +     DL + + +               QLL  ++++H+  ++H
Sbjct: 67  LLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILH 126

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DLKP+N+L+     +K+ D+  L+R+       K++P           S T+ ++    
Sbjct: 127 RDLKPQNLLISDTGELKLADFG-LARA-------KSVP-----------SHTYSNE---- 163

Query: 245 VVSTRHYRAPEVILGLGWNYPC-DLWSVGCILVELCSGEALFQTHENLE-HLAMMERVLG 302
            V T  YR P+V+LG      C D+W VGCI VE+  G A F   ++++  L  +  VLG
Sbjct: 164 -VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLG 222

Query: 303 -------PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
                  P  H +      R   Y              S  ++R  W  L        +V
Sbjct: 223 TPNEDTWPGVHSLPHFKPERFTLY--------------SPKNLRQAWNKL-------SYV 261

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           +H+     DL   LL+  P  RL A+ AL H +F+
Sbjct: 262 NHAE----DLASKLLQCFPKNRLSAQAALSHEYFS 292

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 74.0 bits (182), Expect = 7e-15
 Identities = 78/343 (22%), Positives = 123/343 (35%), Gaps = 115/343 (33%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA--MIEIDVLQRL 145
            N    + I+ ++G+G FG+V +    E     A KI++ I    E    M+EID+L   
Sbjct: 1   VNPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQ-IESEEELEDFMVEIDILSEC 59

Query: 146 ARHDIGGTRYRSFPID-----------------LVREL------------GRQLLESVAF 176
            +H      Y ++  +                 ++ EL             RQ+LE++ F
Sbjct: 60  -KHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNF 118

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST- 235
           +H  ++IH DLK  NILL                   DG           +KL DFG + 
Sbjct: 119 LHSHKVIHRDLKAGNILLTL-----------------DGD----------VKLADFGVSA 151

Query: 236 --TFEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                 Q     + T ++ APEV+         ++Y  D+WS+G  L+EL   E      
Sbjct: 152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEP----- 206

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
                           PHH +                          + MR + K+L+  
Sbjct: 207 ----------------PHHEL--------------------------NPMRVLLKILKSE 224

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
              +      +    D L+  L  DP +R  A E L+HPF + 
Sbjct: 225 PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 73.3 bits (180), Expect = 9e-15
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 54/212 (25%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV------RSINKYREAAMIEIDVLQRLARHDI--- 150
           +G+G FG+V  C+D +    +A+K V          K   A   EI +L+ L    I   
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 151 ------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTD 186
                             GG+       Y +    + R+  RQ+LE V ++H   ++H D
Sbjct: 70  YGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRD 129

Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           +K  NIL  SA  VK+ D+     +SK         +   I      S T        V 
Sbjct: 130 IKGANILRDSAGNVKLGDFG----ASK---------RLQTICS----SGTGM----KSVT 168

Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
            T ++ +PEVI G G+    D+WSVGC +VE+
Sbjct: 169 GTPYWMSPEVISGEGYGRKADVWSVGCTVVEM 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 73.4 bits (180), Expect = 1e-14
 Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 66/224 (29%)

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
            QLL  ++++HE ++IH D+K  N+L+ S  + +++ D+                   +A
Sbjct: 110 EQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADF------------------GAA 151

Query: 227 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
            +L   G+   E Q    ++ T  + APEV+ G  +   CD+WSVGC+++E+ + +  + 
Sbjct: 152 ARLAAKGTGAGEFQGQ--LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWN 209

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
             ++  HLA++                      F+  +    P                 
Sbjct: 210 AEKHSNHLALI----------------------FKIASATTAPS---------------- 231

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           +P       +H +  L D+    L   P +R  +RE L+HP F 
Sbjct: 232 IP-------EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 72.5 bits (178), Expect = 2e-14
 Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 63/222 (28%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           ++I  K+G+G F  V +        +VA+K V+       K R+  + EID+L++L   +
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPN 63

Query: 150 IGGTRYRSFPID-----LVREL----------------GR------------QLLESVAF 176
           +   +Y +  I+     +V EL                 R            QL  ++  
Sbjct: 64  V--IKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           MH  R++H D+KP N+ + +   VK+ D          G +F     SS         TT
Sbjct: 122 MHSKRIMHRDIKPANVFITATGVVKLGDLGL-------GRFF-----SS--------KTT 161

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
             H     +V T +Y +PE I   G+N+  D+WS+GC+L E+
Sbjct: 162 AAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 71.8 bits (176), Expect = 3e-14
 Identities = 63/262 (24%), Positives = 107/262 (40%), Gaps = 62/262 (23%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMI-----EIDVLQRLARHD 149
           +G G+FG V    +    EL+A+K V      + +K R+ +M+     EI +L+ L   +
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 150 I---------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
           I                     GG        Y +F   LVR   RQ+L+ + ++H   +
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGI 127

Query: 183 IHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
           IH D+K  NIL+ +   +K+ D+   K L  +S         P            + F  
Sbjct: 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPS--------LQGSVF-- 177

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM-E 298
                      + APEV+    +    D+WS+GC++VE+ +G+  F     L+ +  + E
Sbjct: 178 -----------WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE 226

Query: 299 RVLGPLPHHMVIRADRRAEKYF 320
                +P ++   A    EK F
Sbjct: 227 NASPEIPSNISSEAIDFLEKTF 248

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 50/240 (20%), Positives = 95/240 (39%), Gaps = 65/240 (27%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDI 150
           Y +L  +G+G+FG V +       +++  K +   N   K ++  + E+++L+ L   +I
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61

Query: 151 -----------------------GG------TRYR----SFPIDLVRELGRQLLESVAFM 177
                                  GG       + +        + +  +  QLL ++   
Sbjct: 62  VRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYEC 121

Query: 178 HEL-----RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
           H        ++H DLKP NI L +   VK+ D+  L++     S F              
Sbjct: 122 HNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG-LAKILGHDSSF-------------- 166

Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
            + T+        V T +Y +PE +  + ++   D+WS+GC++ ELC+    F     L+
Sbjct: 167 -AKTY--------VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 72.4 bits (178), Expect = 5e-14
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 14/120 (11%)

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDGSYFKNLPKSSAIKLIDFG 233
            +H+L  IH D+KP+N+LL +  ++K+ D+   +  + S    +++ L  +     +DF 
Sbjct: 116 SIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFI 175

Query: 234 STTFEHQD--HSY----------VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           S     +    ++           V T  Y APEV L  G+N  CD WS+G I+ E+  G
Sbjct: 176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 70.6 bits (173), Expect = 8e-14
 Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 56/219 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHD 149
            Y  +  +G+G FG+       E   LV  K V   R   K R  A+ EI +L  L   +
Sbjct: 1   HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN 60

Query: 150 I---------------------GGTRYRS--------FPIDLVRELGRQLLESVAFMHEL 180
           I                     GGT Y          F  ++V     Q++ +V+++H+ 
Sbjct: 61  IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H D+K  NI L  A  +K+ D+     S   GS +               + T    
Sbjct: 121 GILHRDIKTLNIFLTKAGLIKLGDFGI---SKILGSEYS-------------MAET---- 160

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
               VV T +Y +PE+  G+ +N+  D+W++GC+L EL 
Sbjct: 161 ----VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 65/238 (27%)

Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           P+D+ R    + + ++ ++H   ++H DLKP+N+L+ S  ++K+ D+      SK G   
Sbjct: 99  PVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGL----SKIG--L 152

Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
            +L  +     I+    T E  D   V  T  Y APEVIL  G+  P D W++G IL E 
Sbjct: 153 MSLTTNLYEGHIE--KDTREFLDKQ-VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 209

Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHM---VIRADRRAEKYFRRGARLDWPDGATSR 335
             G   F                G  P  +   VI  D            ++WP+G  + 
Sbjct: 210 LVGCVPF---------------FGDTPEELFGQVISDD------------IEWPEGDEA- 241

Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL---KAREALRHPFFT 390
                      LP            D  DL+  LLR +P ERL    A E  +H FF 
Sbjct: 242 -----------LPA-----------DAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 59/234 (25%), Positives = 88/234 (37%), Gaps = 77/234 (32%)

Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           P D  ++   +++  V  +H+  +IH D+KPEN+L+    ++K+ D+  LSR+  +   F
Sbjct: 95  PEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFG-LSRNGLENKKF 153

Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                                      V T  Y APE ILG+G +   D WS+GC++ E 
Sbjct: 154 ---------------------------VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEF 186

Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 338
             G   F                   P  +      R         R++WP+      S 
Sbjct: 187 LFGYPPFHAET---------------PDAVFDNILSR---------RINWPEEVKEFCSP 222

Query: 339 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA---REALRHPFF 389
            AV                      DL+  LL  DPA+RL A   +E   HPFF
Sbjct: 223 EAV----------------------DLINRLLCMDPAKRLGANGYQEIKSHPFF 254

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 69.7 bits (170), Expect = 3e-13
 Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 47/246 (19%)

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
            P  +V+ L  Q+L+ + ++H   ++H DLKP NIL++                      
Sbjct: 105 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG------------------- 145

Query: 218 FKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWS 270
               P+   +K+ D G     +       D   VV T  YRAPE++LG   +    D+W+
Sbjct: 146 ----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA 201

Query: 271 VGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 324
           +GCI  EL + E +F   +      N  H   ++R+     + M   AD+  E   +   
Sbjct: 202 IGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF----NVMGFPADKDWEDIKKM-- 255

Query: 325 RLDWPDGAT-SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA 383
               P+ +T  +D  R  +    L   + +H          LLQ LL  DP +R+ + +A
Sbjct: 256 ----PEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 311

Query: 384 LRHPFF 389
           ++ P+F
Sbjct: 312 MQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 69.7 bits (170), Expect = 3e-13
 Identities = 79/343 (23%), Positives = 133/343 (38%), Gaps = 85/343 (24%)

Query: 99  KMGEGTFGQVVECFDNEKKEL------------VAIKIVRSINKYREAAMIEIDVLQRL- 145
           K+G GT+G V +    + K+             +++   R I   RE     +  LQ++ 
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVF 67

Query: 146 --------------ARHDI-----------GGTRYRSFPIDLVRELGRQLLESVAFMHEL 180
                         A HD+              +    P  +V+ L  Q+L+ + ++H  
Sbjct: 68  LSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN 127

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLKP NIL++                          P+   +K+ D G     + 
Sbjct: 128 WVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFARLFNS 164

Query: 241 ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE---- 289
                 D   VV T  YRAPE++LG   +    D+W++GCI  EL + E +F   +    
Sbjct: 165 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 224

Query: 290 --NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT-SRDSMRAVWKLLR 346
             N  H   ++R+       M   AD+  E   +       P+  T  +D  R  +    
Sbjct: 225 TSNPFHHDQLDRIFSV----MGFPADKDWEDIRKM------PEYPTLQKDFRRTTYANSS 274

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           L   + +H       +  LLQ LL  DP +R+ + +AL+ P+F
Sbjct: 275 LIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 85/251 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
            + ++  +GEGT+G+V +    +  +LVAIKI+  I    E    E ++L++ + H    
Sbjct: 7   IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIA 66

Query: 149 DIGGTRYRSFP-------------------IDLVRELG---------------RQLLESV 174
              G   +  P                    DLV+ L                R+ L  +
Sbjct: 67  TFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGL 126

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
           A++HE ++IH D+K +NILL                            K++ +KL+DFG 
Sbjct: 127 AYLHENKVIHRDIKGQNILLT---------------------------KNAEVKLVDFGV 159

Query: 234 ---STTFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGE--- 282
                +   + +++ + T ++ APEVI         ++   D+WS+G   +EL  G+   
Sbjct: 160 SAQLDSTLGRRNTF-IGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPL 218

Query: 283 -------ALFQ 286
                  ALF+
Sbjct: 219 CDMHPMRALFK 229

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 71/236 (30%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARH-- 148
            Y ++ ++G GT+G V +  D    ELVAIK++  +    +  +I  EI +L+   RH  
Sbjct: 4   DYELIQRIGSGTYGDVYKARDIATGELVAIKVI-KLEPGDDFEIIQQEISMLKE-CRHPN 61

Query: 149 ---------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                      DI            +  + R+ L+ +A++HE  
Sbjct: 62  IVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-----STT 236
            IH D+K  NILL                 ++DG           +KL DFG     + T
Sbjct: 122 KIHRDIKGANILL-----------------TEDGD----------VKLADFGVSAQLTAT 154

Query: 237 FEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSGE-ALFQTH 288
                    + T ++ APEV       G++  CD+W++G   +EL   +  +F  H
Sbjct: 155 I--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 69.4 bits (169), Expect = 1e-12
 Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 65/259 (25%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVL 142
           GE+    Y ++ K+G G FG+V        +E    K +  R + K RE +  +IE++V+
Sbjct: 8   GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVM 66

Query: 143 QRLARHDIGGTRY---------RSFPI--------DLVR------------------ELG 167
           + L   +I   RY         +   I        DL R                  ++ 
Sbjct: 67  RELKHKNI--VRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDIT 124

Query: 168 RQLLESVAFMHEL-------RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
           RQLL ++A+ H L       R++H DLKP+NI L +           +    K  +   N
Sbjct: 125 RQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG----------IRHIGKITAQANN 174

Query: 221 LPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCIL 275
           L      K+ DFG   +   E   HS  V T +Y +PE++L    +Y    D+W++GCI+
Sbjct: 175 LNGRPIAKIGDFGLSKNIGIESMAHS-CVGTPYYWSPELLLHETKSYDDKSDMWALGCII 233

Query: 276 VELCSGEALFQTHENLEHL 294
            ELCSG+  F    N   L
Sbjct: 234 YELCSGKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 66.9 bits (163), Expect = 1e-12
 Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 74/274 (27%)

Query: 93  RYRILSKMGEGTFGQVV----------------------ECFDNEKKELVAIKIVRSIN- 129
           +Y +L  +GEG+FG+ +                         ++ +KE V +  ++  N 
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI 60

Query: 130 -KYREA--------AMIEI----DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAF 176
             ++E+         ++E     D++Q+     I   R + FP D + +   Q+   V  
Sbjct: 61  VAFKESFEADGHLYIVMEYCDGGDLMQK-----IKLQRGKLFPEDTILQWFVQMCLGVQH 115

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +HE R++H D+K +NI              FL+++ K             +KL DFGS  
Sbjct: 116 IHEKRVLHRDIKSKNI--------------FLTQNGK-------------VKLGDFGSAR 148

Query: 237 FEHQDHSYV---VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH--ENL 291
                 +Y    V T +Y  PE+   + +N   D+WS+GCIL ELC+ +  FQ +  +NL
Sbjct: 149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL 208

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 325
             L + +    PLP H         ++ F+R  R
Sbjct: 209 I-LKVCQGSYKPLPSHYSYELRSLIKQMFKRNPR 241

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 66.9 bits (163), Expect = 2e-12
 Identities = 72/332 (21%), Positives = 119/332 (35%), Gaps = 118/332 (35%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDVLQRLARHDI-- 150
           +G+G +G V  C    + +L+A+K V        +  K  E    E+D+L+ L   +I  
Sbjct: 8   LGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 151 -------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
                              GG+      R+   P  +  +  +Q+L+ VA++H   ++H 
Sbjct: 67  YLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHR 126

Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-----TFEHQ 240
           D+K  N++L+                            +  IKLIDFG          H 
Sbjct: 127 DIKGNNVMLMP---------------------------NGIIKLIDFGCARRLAWVGLHG 159

Query: 241 DHSYVVSTRH----YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            HS ++ + H    + APEVI   G+    D+WS+GC + E+ +G+    + + L  +  
Sbjct: 160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY 219

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           +    G +P                                        RLP       D
Sbjct: 220 IGAHRGLMP----------------------------------------RLP-------D 232

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
             +   ID +   L  D  ER  A + LRH F
Sbjct: 233 SFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 75/329 (22%), Positives = 118/329 (35%), Gaps = 116/329 (35%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDI----- 150
           +G+GTFG+V+   +    +  A+KI++   I    E A  + E  VLQ   RH       
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALK 61

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG      +R R F  D  R  G +++ ++ ++H   +++ DL
Sbjct: 62  YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K EN++L    ++K+ D+       K+G              I  G+T            
Sbjct: 122 KLENLMLDKDGHIKITDFGL----CKEG--------------ISDGATM------KTFCG 157

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERVLGPLP 305
           T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME       
Sbjct: 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE------ 211

Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
                                                  +R P  +         +   L
Sbjct: 212 ---------------------------------------IRFPRTLSP-------EAKSL 225

Query: 366 LQGLLRYDPAERL-----KAREALRHPFF 389
           L GLL+ DP +RL      A+E + H FF
Sbjct: 226 LAGLLKKDPKQRLGGGPEDAKEIMEHRFF 254

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 65/251 (25%), Positives = 99/251 (39%), Gaps = 63/251 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHD 149
           +Y  +  +G G FG V  C     ++LV IK +   +     R AA  E  VL+ L+  +
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60

Query: 150 I---------------------GGT-------RYRS-FPIDLVRELGRQLLESVAFMHEL 180
           I                     GGT       R  S    D +     Q+L ++  +H  
Sbjct: 61  IIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
            ++H DLK +NILL   + V                          +K+ DFG S     
Sbjct: 121 LILHRDLKTQNILLDKHKMV--------------------------VKIGDFGISKILSS 154

Query: 240 QDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM-- 296
           +  +Y VV T  Y +PE+  G  +N   D+W++GC+L EL S +  F+   NL  L +  
Sbjct: 155 KSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-ANLPALVLKI 213

Query: 297 MERVLGPLPHH 307
           M     P+   
Sbjct: 214 MSGTFAPISDR 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 65.8 bits (160), Expect = 3e-12
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 56/220 (25%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLAR 147
           +R+   +G+G FG+V  C+D +    +A+K V+        +K   A   EI +L+ L  
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH 63

Query: 148 HDI-----------------------GGT------RYRSFPIDLVRELGRQLLESVAFMH 178
             I                       GG+       Y +   ++ R+  RQ+LE V+++H
Sbjct: 64  ERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH 123

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              ++H D+K  NIL  S   VK+ D+                  S  ++ I    T  +
Sbjct: 124 SNMIVHRDIKGANILRDSVGNVKLGDFG----------------ASKRLQTICLSGTGMK 167

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                 V  T ++ +PEVI G G+    D+WSVGC +VE+
Sbjct: 168 S-----VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 65.2 bits (159), Expect = 6e-12
 Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 64/223 (28%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKY-------REAAMI-----EIDVLQRLAR 147
           +G+GT+G+V    +    E++A+K V  +          R+  M+     EI+ L+ L  
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVE-LPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 148 HDI---------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHEL 180
            +I                     GG+       Y  F   LVR    Q+LE +A++H  
Sbjct: 68  LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK 127

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLK +N+L+ +    K+ D+  +S+ S D   + N    S         + F   
Sbjct: 128 GILHRDLKADNLLVDADGICKISDFG-ISKKSDD--IYDNDQNMS------MQGSVF--- 175

Query: 241 DHSYVVSTRHYRAPEVI--LGLGWNYPCDLWSVGCILVELCSG 281
                     + APEVI     G++   D+WS+GC+++E+ +G
Sbjct: 176 ----------WMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 65.1 bits (158), Expect = 9e-12
 Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 68/228 (29%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDI-- 150
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EI++L       I  
Sbjct: 14  WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVK 73

Query: 151 -------------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                              GG          R      ++ + RQ+LE++ ++H +++IH
Sbjct: 74  LLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIH 133

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-----TFEH 239
            DLK  N+LL                 + DG           IKL DFG +     T + 
Sbjct: 134 RDLKAGNVLL-----------------TLDGD----------IKLADFGVSAKNVKTLQR 166

Query: 240 QDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 282
           +D    + T ++ APEV++        ++Y  D+WS+G  L+E+   E
Sbjct: 167 RDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 212

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 64.7 bits (157), Expect = 1e-11
 Identities = 73/340 (21%), Positives = 125/340 (36%), Gaps = 111/340 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDI-- 150
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L      +I  
Sbjct: 7   WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 66

Query: 151 ------------------GGTRYRSFPIDLVRELG--------RQLLESVAFMHELRLIH 184
                              G    +  ++L R L         +Q LE++ ++HE ++IH
Sbjct: 67  LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIH 126

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEHQD 241
            DLK  NIL                  + DG           IKL DFG     T   Q 
Sbjct: 127 RDLKAGNILF-----------------TLDGD----------IKLADFGVSAKNTRTIQR 159

Query: 242 HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
               + T ++ APEV++        ++Y  D+WS+G  L+E+   E              
Sbjct: 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEP------------- 206

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                   PHH +                          + MR + K+ +     +    
Sbjct: 207 --------PHHEL--------------------------NPMRVLLKIAKSEPPTLAQPS 232

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
             + +  D L+  L  +   R    + L+HPF T +  +P
Sbjct: 233 RWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKP 272

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 72/233 (30%)

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
             +L++++F+H   +IH D+K ++ILL S   VK+ D+ F ++ SK+      +P+  ++
Sbjct: 122 LAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE------VPRRKSL 175

Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
                             V T ++ APEVI  L +    D+WS+G +++E+  GE     
Sbjct: 176 ------------------VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP---P 214

Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
           + N   L  M+R+                                  RD+         L
Sbjct: 215 YFNEPPLQAMKRI----------------------------------RDN---------L 231

Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 400
           P  +      S   L   L  +L  DPA+R  A E L HPF       P+ +V
Sbjct: 232 PPKLKNLHKVSP-RLRSFLDRMLVRDPAQRATAAELLNHPFL-AKAGPPSSIV 282

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 63.9 bits (155), Expect = 2e-11
 Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 58/221 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV------RSINKYREAAMIEIDVLQRLAR 147
           +R+   +G G FG+V  C+D +    +A+K V      +  +K   A   EI +L+ L R
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-R 62

Query: 148 HD------------------------IGGT------RYRSFPIDLVRELGRQLLESVAFM 177
           HD                         GG+       Y +   ++ R   RQ+L+ V+++
Sbjct: 63  HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYL 122

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H   ++H D+K  NIL  SA  VK+ D+                  S  I+ I    T  
Sbjct: 123 HSNMIVHRDIKGANILRDSAGNVKLGDFG----------------ASKRIQTICMSGTGI 166

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
           +      V  T ++ +PEVI G G+    D+WSV C +VE+
Sbjct: 167 KS-----VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 78/326 (23%), Positives = 121/326 (37%), Gaps = 110/326 (33%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDI----- 150
           +G+G+FG+V+        +  A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG       R RSFP    R    ++  ++ ++H L +I+ DL
Sbjct: 63  YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           KPENILL S  +V + D+       K+G              I+   TT      S    
Sbjct: 123 KPENILLDSQGHVVLTDFGL----CKEG--------------IEHSKTT------STFCG 158

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHH 307
           T  Y APEV+    ++   D W +G +L E+  G   F + +  E   M + +L      
Sbjct: 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYDNILN----- 210

Query: 308 MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ 367
                                              K LRL   I     H       LL+
Sbjct: 211 -----------------------------------KPLRLKPNISVSARH-------LLE 228

Query: 368 GLLRYDPAERLKAREALR----HPFF 389
           GLL+ D  +RL A++       H FF
Sbjct: 229 GLLQKDRTKRLGAKDDFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 66/231 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           +Y  + K+GEG+FG+ +     E  +   IK   I +   K RE +  E+ VL  +   +
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN 60

Query: 150 I---------------------GGTRYRS--------FPIDLVRELGRQLLESVAFMHEL 180
           I                     GG  Y+         FP D + +   Q+  ++  +H+ 
Sbjct: 61  IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-----ST 235
           +++H D+K +NI L                 +KDG           IKL DFG     ++
Sbjct: 121 KILHRDIKSQNIFL-----------------TKDG----------TIKLGDFGIARVLNS 153

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
           T E       + T +Y +PE+     +N   D+W++GC+L E+C+ +  F+
Sbjct: 154 TVELA--RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 67/333 (20%), Positives = 120/333 (36%), Gaps = 115/333 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH- 148
           +  +  +G G+FG+V+        +  A+KI+    I K ++   +  E  +LQ + RH 
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP 61

Query: 149 ----------D-----------IGGT------RYRSFPIDLVRELGRQLLESVAFMHELR 181
                     D            GG       +   FP  + R    Q++ ++ ++H L 
Sbjct: 62  FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +++ DLKPEN+LL S  Y+K+ D+ F                    K +   + T     
Sbjct: 122 IVYRDLKPENLLLDSDGYIKITDFGF-------------------AKRVKGRTYT----- 157

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
              +  T  Y APE+IL  G+    D W++G ++ E+ +G   F        + + E++L
Sbjct: 158 ---LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD---NPIQIYEKIL 211

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                                  ++ +P                               D
Sbjct: 212 ---------------------EGKVRFP-----------------------SFFS---PD 224

Query: 362 LIDLLQGLLRYDPAERL-----KAREALRHPFF 389
             DL++ LL+ D  +RL        +   HP+F
Sbjct: 225 AKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 62.4 bits (151), Expect = 6e-11
 Identities = 77/334 (23%), Positives = 124/334 (37%), Gaps = 105/334 (31%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGTR 154
           L ++G+G+FG+V +  DN  KE+VAIKI+       E   I  EI VL +     I  TR
Sbjct: 9   LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI--TR 66

Query: 155 Y--------------------------RSFPID--LVRELGRQLLESVAFMHELRLIHTD 186
           Y                          +  P++   +  + R++L+ + ++H  R IH D
Sbjct: 67  YYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRD 126

Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           +K  N+LL     VK+ D+                           G  T      +  V
Sbjct: 127 IKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKRNTFV 162

Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPH 306
            T  + APEVI    +++  D+WS+G   +EL  GE     + +L  +    RVL  +P 
Sbjct: 163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP---PNSDLHPM----RVLFLIPK 215

Query: 307 HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 366
           +                                        P L  Q+    +    + +
Sbjct: 216 N--------------------------------------SPPTLEGQY----SKPFKEFV 233

Query: 367 QGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 400
           +  L  DP  R  A+E L+H F TR  ++ + L 
Sbjct: 234 EACLNKDPRFRPTAKELLKHKFITRYTKKTSFLT 267

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 61.9 bits (150), Expect = 7e-11
 Identities = 76/344 (22%), Positives = 119/344 (34%), Gaps = 133/344 (38%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREA--AMIEIDVLQRLA 146
           RY +  ++G+G+FG V    D +      +K+++ I        E   A  E  +L +L 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60

Query: 147 RHDIGG--------------TRY-----------------RSFPIDLVRELGRQLLESVA 175
              I                T Y                 ++   + V E   QLL  V 
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 233
           +MH+ R++H DLK +NI L                            K++ +K+ DFG  
Sbjct: 121 YMHQRRILHRDLKAKNIFL----------------------------KNNLLKIGDFGVS 152

Query: 234 ---------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
                    +TTF          T +Y +PE +   G++   D+WS+GCIL E+C     
Sbjct: 153 RLLMGSCDLATTF--------TGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHA 204

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F+    L    ++  V GP P                                       
Sbjct: 205 FEGQNFLS--VVLRIVEGPTP--------------------------------------- 223

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
             LP       +  +  L  ++Q +L  DP+ R  A E LR+PF
Sbjct: 224 -SLP-------ETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 62.0 bits (150), Expect = 7e-11
 Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 63/229 (27%)

Query: 94  YRILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHD 149
           ++I  K+G G F +V       D +   L  ++I   ++ K R+  + EID+L++L   +
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN 63

Query: 150 IGGTRY-RSF----PIDLVRELGR----------------------------QLLESVAF 176
           +   +Y  SF     +++V EL                              QL  +V  
Sbjct: 64  V--IKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH 121

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           MH  R++H D+KP N+ + +   VK+ D          G +F +              TT
Sbjct: 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS-------------KTT 161

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
             H     +V T +Y +PE I   G+N+  D+WS+GC+L E+ + ++ F
Sbjct: 162 AAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 61.8 bits (150), Expect = 7e-11
 Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 56/224 (25%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHDI 150
           + IL+K+G+G+FG V +      K + A+K +    +N + RE A+ E  VL +L    I
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 151 ---------------------GGT--------RYRSFPIDLVRELGRQLLESVAFMHELR 181
                                 G         R R  P D V     Q+L  +A +H  +
Sbjct: 62  IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H D+K  N+ L + + VK+ D   +++   D + F N                     
Sbjct: 122 ILHRDIKSLNLFLDAYDNVKIGDLG-VAKLLSDNTNFANT-------------------- 160

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
              +V T +Y +PE+     +N   D+W++G +L E C+G+  F
Sbjct: 161 ---IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 62.7 bits (152), Expect = 9e-11
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 31/162 (19%)

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDG 215
           FP DL R    +L  +V  +H++  IH D+KP+NIL+    ++K+ D+   +  R + D 
Sbjct: 98  FPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157

Query: 216 SYFK--NLPKSSAIKLIDFGS--------------------TTFEHQD---HSYVVSTRH 250
            Y++  +  +  ++   DF +                       +HQ    HS +V T +
Sbjct: 158 KYYQSGDHVRQDSM---DFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHS-LVGTPN 213

Query: 251 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
           Y APEV+L  G+   CD WSVG IL E+  G+  F     LE
Sbjct: 214 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLE 255

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 21/148 (14%)

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDG 215
           F  DL R    +L  ++  +H++  IH D+KP+NIL+    ++K+ D+   +  R + D 
Sbjct: 98  FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157

Query: 216 SYFK--NLPKSSAIKLIDFGS-------TTFE------HQD---HSYVVSTRHYRAPEVI 257
            Y++  +  +  +++  +  S          E      HQ    HS +V T +Y APEV+
Sbjct: 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHS-LVGTPNYIAPEVL 216

Query: 258 LGLGWNYPCDLWSVGCILVELCSGEALF 285
           L  G+   CD WSVG IL E+  G+  F
Sbjct: 217 LRTGYTQLCDWWSVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 61.1 bits (148), Expect = 1e-10
 Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 68/242 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           RY I+ K+GEG+FG++         E   IK   + +   K +EA+  E+ +L ++   +
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 150 IGGTRYRSFPI--------------DLVRELGRQLLESVAF------------------M 177
           I  T + SF                DL++ + RQ    V F                  +
Sbjct: 61  I-VTFFASFQENGRLFIVMEYCDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHI 117

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+ +++H D+K +NI              FLS++                KL DFG    
Sbjct: 118 HDRKILHRDIKSQNI--------------FLSKNGM------------VAKLGDFGIARQ 151

Query: 238 EHQDHSYV---VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
            +         V T +Y +PE+     +N   D+WS+GC+L ELC+ +  F+ + NL  L
Sbjct: 152 LNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQL 210

Query: 295 AM 296
            +
Sbjct: 211 VL 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 58/246 (23%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLARHDI--- 150
           +G+G FG+V  C+D +    +A K V+        +K   A   EI +L+ L    I   
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 151 --------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                               GG+       Y +    + R+  RQ+LE ++++H   ++H
Sbjct: 70  YGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVH 129

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NIL  SA  VK+ D+                  S  ++ I    T         
Sbjct: 130 RDIKGANILRDSAGNVKLGDFG----------------ASKRLQTICMSGTGIRS----- 168

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM--ERVLG 302
           V  T ++ +PEVI G G+    D+WS+GC +VE+ + +  +  +E +  +  +  +    
Sbjct: 169 VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP 228

Query: 303 PLPHHM 308
            LP H+
Sbjct: 229 QLPSHI 234

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 59.7 bits (144), Expect = 4e-10
 Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 61/228 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHD 149
           +RI  K+G G F +V           VA+K V+  +    K R   + EID+L++L   +
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63

Query: 150 IGGTRYRSF----PIDLVRELGR----------------------------QLLESVAFM 177
           +    Y SF     +++V EL                              QL  ++  M
Sbjct: 64  VI-KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H  R++H D+KP N+ + +   VK+ D          G +F +              TT 
Sbjct: 123 HSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS-------------KTTA 162

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            H     +V T +Y +PE I   G+N+  D+WS+GC+L E+ + ++ F
Sbjct: 163 AHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 60.3 bits (146), Expect = 5e-10
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 23/151 (15%)

Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           +Y +F  D+ R    + + ++  +H+L  IH D+KP+NIL+    ++K+ D+   +   K
Sbjct: 94  KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153

Query: 214 --DGSYFKNLPKSSAIK---------LIDFGSTTFEHQDH-----------SY-VVSTRH 250
             D +Y++ L +  + K          +D  + T   +D            +Y  V T  
Sbjct: 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPD 213

Query: 251 YRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           Y APE+ L  G+   CD WS+G I+ E   G
Sbjct: 214 YIAPEIFLQQGYGQECDWWSLGAIMFECLIG 244

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 59.0 bits (143), Expect = 9e-10
 Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 66/240 (27%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDI- 150
           Y+ L  +G G +G V          +VA+KI+       + + I  E+ +L +L +    
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 151 -----------------------GG---TRYRSFPID--LVRELGRQLLESVAFMHELRL 182
                                  GG   T  ++ PI    +  + R++L ++ ++H++ +
Sbjct: 63  NITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGV 122

Query: 183 IHTDLKPENILLVSAEYVKVPDY----KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           IH D+K  NIL+ +   VK+ D+         SSK                     +TF 
Sbjct: 123 IHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK--------------------RSTF- 161

Query: 239 HQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
                  V T ++ APEVI  G  ++   D+WS+G  + E+ +G   +   +     AMM
Sbjct: 162 -------VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD--AFRAMM 212

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 29/143 (20%)

Query: 169 QLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           Q++ ++ ++H E R++H DL P NI+L   + V + D+  L++  +  S   +       
Sbjct: 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG-LAKQKQPESKLTS------- 172

Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
                            VV T  Y  PE++    +    D+W+ GCIL ++C+ +  F +
Sbjct: 173 -----------------VVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS 215

Query: 288 HENLEHLAM--MERVLGPLPHHM 308
             N+  LA   +E V  PLP  M
Sbjct: 216 -TNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 78/344 (22%), Positives = 133/344 (38%), Gaps = 115/344 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-----RSINKYREAAMIEIDVLQRLAR 147
            +  L ++G G+FG V    D    E+VAIK +     +S  K+++  + E+  LQ+L R
Sbjct: 16  LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQQL-R 73

Query: 148 H----DIGGTRYRSFPIDLVRE--LG----------------------RQLLESVAFMHE 179
           H    +  G   R     LV E  LG                         L+ +A++H 
Sbjct: 74  HPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHS 133

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
              IH D+K  NILL                 ++ G+          +KL DFGS +   
Sbjct: 134 HERIHRDIKAGNILL-----------------TEPGT----------VKLADFGSASLVS 166

Query: 240 QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
             +S+ V T ++ APEVIL +    ++   D+WS+G   +EL                  
Sbjct: 167 PANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------------------ 207

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                          A+R+    F             + ++M A++ + +  +  +   D
Sbjct: 208 ---------------AERKP-PLF-------------NMNAMSALYHIAQNDSPTLSSND 238

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 400
            S     + +   L+  P +R  + E L+H F  R+ R PT+++
Sbjct: 239 WSD-YFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE-RPPTVII 280

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 75/338 (22%), Positives = 124/338 (36%), Gaps = 115/338 (34%)

Query: 94  YRILSKMGEGTFGQV--VECFDNEKKELVAIKIVR------SINKYRE--AAM------- 136
           Y ++  +G G    V    C  N   E VAIK +       S+++ R+   AM       
Sbjct: 3   YELIEVIGVGATAVVYAAICLPN--NEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPN 60

Query: 137 --------IEIDVLQRLARHDIGGTRY----RSFPIDLVRE-----LGRQLLESVAFMHE 179
                   +  D L  +  +  GG+       S+P   + E     + +++L+ + ++H 
Sbjct: 61  VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS 120

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTF 237
              IH D+K  NILL                  +DGS          +K+ DFG  ++  
Sbjct: 121 NGQIHRDIKAGNILL-----------------GEDGS----------VKIADFGVSASLA 153

Query: 238 EHQDHSY-----VVSTRHYRAPEVI-LGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
           +  D +       V T  + APEV+    G+++  D+WS G   +EL +G A +      
Sbjct: 154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS----- 208

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
                M+ ++  L +                    D P   T  D  +   K  R     
Sbjct: 209 -KYPPMKVLMLTLQN--------------------DPPSLETGAD-YKKYSKSFR----- 241

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                     +I L    L+ DP++R  A E L+H FF
Sbjct: 242 ---------KMISL---CLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 25/156 (16%)

Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RS 211
           R   FP  L R    +L  ++  +H++  IH D+KP+NIL+    ++K+ D+   +  R 
Sbjct: 94  RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW 153

Query: 212 SKDGSYFK--NLPKSSAIKLIDF-----------------GSTTFEHQD---HSYVVSTR 249
           + +  Y++  +  +  +++  D                     T +HQ    HS +V T 
Sbjct: 154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHS-LVGTP 212

Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           +Y APEV+L  G+   CD WSVG IL E+  G+  F
Sbjct: 213 NYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 68/318 (21%), Positives = 122/318 (38%), Gaps = 98/318 (30%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V    +      VA+K++    + R   +    V+ R  +H      Y+S+
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 159 PI-----------------DLVRE----------LGRQLLESVAFMHELRLIHTDLKPEN 191
            +                 D+V +          +   +L+++ ++H   +IH D+K ++
Sbjct: 88  LVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDS 147

Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL     VK+ D+ F ++ SKD      +PK  ++                  V T ++
Sbjct: 148 ILLTLDGRVKLSDFGFCAQISKD------VPKRKSL------------------VGTPYW 183

Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
            APEVI    +    D+WS+G +++E+  GE                             
Sbjct: 184 MAPEVISRTPYGTEVDIWSLGIMVIEMVDGEP---------------------------- 215

Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
                  YF             S   ++A+ +L   P   +++    +  L D L+ +L 
Sbjct: 216 ------PYF-------------SDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLT 256

Query: 372 YDPAERLKAREALRHPFF 389
            +P ER  A+E L HPF 
Sbjct: 257 REPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 66/256 (25%), Positives = 92/256 (35%), Gaps = 93/256 (36%)

Query: 142 LQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 201
           LQR  R D+   R+ +           +LL ++  +H+  +I+ DLKPENILL       
Sbjct: 84  LQREGRFDLSRARFYT----------AELLCALENLHKFNVIYRDLKPENILL------- 126

Query: 202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV---VSTRHYRAPEVIL 258
             DY                     I L DFG      +D         T  Y APE++L
Sbjct: 127 --DY------------------QGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLL 166

Query: 259 GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK 318
           G G+    D W++G +L E+ +G                      LP       D    +
Sbjct: 167 GHGYTKAVDWWTLGVLLYEMLTG----------------------LPPFY----DENVNE 200

Query: 319 YFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL 378
            +R                     K+L+ P       D  A    DLL GLL  DP  RL
Sbjct: 201 MYR---------------------KILQEPLRFPDGFDRDAK---DLLIGLLSRDPTRRL 236

Query: 379 ---KAREALRHPFFTR 391
               A+E   HPFF++
Sbjct: 237 GYNGAQEIKNHPFFSQ 252

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 64/244 (26%), Positives = 99/244 (40%), Gaps = 65/244 (26%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDI----- 150
           +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH       
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 61

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTD 186
                            GG      +R R F  D  R  G +++ ++ ++H E  +++ D
Sbjct: 62  YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 121

Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           LK EN++L    ++K+ D+       KDG+  K                TF         
Sbjct: 122 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMK----------------TF--------C 157

Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME-----R 299
            T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME     R
Sbjct: 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 217

Query: 300 VLGP 303
            L P
Sbjct: 218 TLSP 221

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 53/240 (22%), Positives = 85/240 (35%), Gaps = 78/240 (32%)

Query: 156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
             FP         Q++  +  +H+ R+++ DLKPEN+LL     V++ D           
Sbjct: 90  PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGL-------- 141

Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 275
                     A++L   G              T  Y APEV+ G  +++  D +++GC L
Sbjct: 142 ----------AVELKG-GKKI-----KGRA-GTPGYMAPEVLQGEVYDFSVDWFALGCTL 184

Query: 276 VELCSGEALFQTH-ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
            E+ +G + F+   E +E   +  R L              A +Y         PD  + 
Sbjct: 185 YEMIAGRSPFRQRKEKVEKEELKRRTL------------EMAVEY---------PDKFSP 223

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
                                     +  DL + LL+ DP +RL      A E   HP F
Sbjct: 224 --------------------------EAKDLCEALLQKDPEKRLGCRGGSADEVREHPLF 257

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 56.7 bits (136), Expect = 5e-09
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 30/133 (22%)

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +NILL                   DGS          +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 155

Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE  
Sbjct: 156 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

Query: 285 FQTHENLEHLAMM 297
           +     L  L ++
Sbjct: 216 YLNENPLRALYLI 228

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 54/230 (23%), Positives = 87/230 (37%), Gaps = 66/230 (28%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDI----- 150
           +G G+FG+V         E  AIK ++       K  +    E  +L  L+   I     
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMC 85

Query: 151 ----------------GG---TRYRS---FPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                           GG   T  R    FP D+ +    +L+ +  ++H   +I+ DLK
Sbjct: 86  SFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLK 145

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV-S 247
           PEN+LL +  +VKV D+ F  +                              D ++ +  
Sbjct: 146 PENLLLDNKGHVKVTDFGFAKKVP----------------------------DRTFTLCG 177

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG------EALFQTHENL 291
           T  Y APEVI   G     D W++G +L E  +G      +  F+ +E +
Sbjct: 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKI 227

Length = 329

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 56.9 bits (137), Expect = 6e-09
 Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 59/221 (26%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHD---IGG 152
           +G+GTFGQV +    + + + A+K++  + I   +E A    E ++L R    +   I G
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 153 --------------TRYRS-------------FPIDLVRELGRQLLESVAFMHELRLIHT 185
                         T Y S             F  D  +    +L+ ++  +H+  +++ 
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120

Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DLKPENILL +  ++ + D+  LS++        NL  +         + TF        
Sbjct: 121 DLKPENILLDATGHIALCDFG-LSKA--------NLTDNKT-------TNTF-------- 156

Query: 246 VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 285
             T  Y APEV+L   G+    D WS+G ++ E+C G + F
Sbjct: 157 CGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF 197

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 57.0 bits (137), Expect = 6e-09
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 13/121 (10%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDGSYFKNLPKSSAIKLIDFGS 234
           +H+L  IH D+KP+N+LL S  +VK+ D+   +  + +    +++NL  S       F +
Sbjct: 117 IHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFT-FQN 175

Query: 235 TTFEHQDHSY----------VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
              + +  ++           V T  Y APEV +  G+N  CD WS+G I+ E+  G   
Sbjct: 176 MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235

Query: 285 F 285
           F
Sbjct: 236 F 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 56.2 bits (135), Expect = 6e-09
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 62/219 (28%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARHD--- 149
           L ++G+G+FG+V +  DN  +++VAIKI+       E A  EI+ +Q+    L++ D   
Sbjct: 9   LERIGKGSFGEVFKGIDNRTQQVVAIKIID-----LEEAEDEIEDIQQEITVLSQCDSPY 63

Query: 150 --------IGGTRY----------------RSFPID--LVRELGRQLLESVAFMHELRLI 183
                   + GT+                 R+ P D   +  + +++L+ + ++H  + I
Sbjct: 64  VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI 123

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+K  N+LL     VK+ D+    + +            + IK   F  T F      
Sbjct: 124 HRDIKAANVLLSEQGDVKLADFGVAGQLT-----------DTQIKRNTFVGTPF------ 166

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
                  + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 167 -------WMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 56.3 bits (136), Expect = 6e-09
 Identities = 48/225 (21%), Positives = 81/225 (36%), Gaps = 71/225 (31%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-----RHDIG 151
           LS++GEG  G V +C       + A+K + +         ++  +L+ L      +    
Sbjct: 6   LSRLGEGAGGSVTKCRLKNTGMIFALKTITT----DPNPDLQKQILRELEINKSCKSPYI 61

Query: 152 GTRYRSFPIDL----------------------VRELGRQLLESVA------------FM 177
              Y +F  +                       V++ G ++ E V             ++
Sbjct: 62  VKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H  ++IH D+KP NILL                 ++ G           +KL DFG S  
Sbjct: 122 HSRKIIHRDIKPSNILL-----------------TRKG----------QVKLCDFGVSGE 154

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
             +        T  Y APE I G  ++   D+WS+G  L+E+   
Sbjct: 155 LVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQN 199

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 56.6 bits (136), Expect = 6e-09
 Identities = 74/330 (22%), Positives = 115/330 (34%), Gaps = 116/330 (35%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMI-EIDVLQRLARHDI----- 150
           +G+GTFG+V+   +       A+KI+R    I K   A  + E  VLQ   RH       
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 61

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG      +R R F  +  R  G +++ ++ ++H   +++ D+
Sbjct: 62  YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K EN++L    ++K+ D+        DG+  K                TF          
Sbjct: 122 KLENLMLDKDGHIKITDFGLCKEGISDGATMK----------------TF--------CG 157

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERVLGPLP 305
           T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +     
Sbjct: 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI----- 212

Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
                                                   R P  +             L
Sbjct: 213 ----------------------------------------RFPRTLSPEAK-------SL 225

Query: 366 LQGLLRYDPAERL-----KAREALRHPFFT 390
           L GLL+ DP +RL      A+E + H FF 
Sbjct: 226 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 56.4 bits (136), Expect = 7e-09
 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 35/152 (23%)

Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
           D+L  L R++        F  D+ +    +L+ ++  +H++  +H D+KPEN+L+    +
Sbjct: 87  DLLSLLNRYE------DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGH 140

Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG 259
           +K+ D+   +R + +      LP                       V T  Y APEV+  
Sbjct: 141 IKLADFGSAARLTANKMVNSKLP-----------------------VGTPDYIAPEVLTT 177

Query: 260 LG------WNYPCDLWSVGCILVELCSGEALF 285
           +       +   CD WS+G I  E+  G + F
Sbjct: 178 MNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 56.3 bits (135), Expect = 7e-09
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 30/133 (22%)

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +NILL                   DGS          +
Sbjct: 122 RECLQALDFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 154

Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE  
Sbjct: 155 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214

Query: 285 FQTHENLEHLAMM 297
           +     L  L ++
Sbjct: 215 YLNENPLRALYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 56.1 bits (135), Expect = 8e-09
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +NILL                   DGS          +
Sbjct: 122 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 154

Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 155 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 55.6 bits (134), Expect = 8e-09
 Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 80/245 (32%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDI-------- 150
           +G+GT+G V    D   +  +AIK I    ++Y +    EI +   L   +I        
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 151 -------------GGT-----RYRSFPI----DLVRELGRQLLESVAFMHELRLIHTDLK 188
                        GG+     R +  P+      +    +Q+LE + ++H+ +++H D+K
Sbjct: 76  ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIK 135

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-----------TF 237
            +N+L        V  Y                  S  +K+ DFG++           TF
Sbjct: 136 GDNVL--------VNTY------------------SGVVKISDFGTSKRLAGINPCTETF 169

Query: 238 EHQDHSYVVSTRHYRAPEVI-LGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
                     T  Y APEVI  G  G+  P D+WS+GC +VE+ +G+  F   E  E  A
Sbjct: 170 --------TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IELGEPQA 219

Query: 296 MMERV 300
            M +V
Sbjct: 220 AMFKV 224

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 56.2 bits (135), Expect = 8e-09
 Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 57/237 (24%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDI------ 150
           +G+GTFG+V+   +    +  A+KI++    I K   A  +    + +  RH        
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKY 62

Query: 151 ----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                           GG      +R R F  D  R  G +++ ++ ++H  ++++ DLK
Sbjct: 63  SFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLK 122

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
            EN++L    ++K+ D+        D +  K                            T
Sbjct: 123 LENLMLDKDGHIKITDFGLCKEGITDAATMKTF------------------------CGT 158

Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERVLGP 303
             Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +  P
Sbjct: 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 56.0 bits (135), Expect = 9e-09
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 24/146 (16%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H L +I+ DLKPENILL    ++K+ D+  LS+ S D                      
Sbjct: 114 LHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESIDH--------------------- 151

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            E + +S+   T  Y APEV+   G     D WS G ++ E+ +G   FQ  +  E + M
Sbjct: 152 -EKKAYSFC-GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM 209

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRR 322
           + +    +P  +   A       F+R
Sbjct: 210 ILKAKLGMPQFLSPEAQSLLRALFKR 235

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 55.8 bits (134), Expect = 9e-09
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 27/136 (19%)

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           +L +++++H   +IH D+K ++ILL S   +K+ D+ F ++ SK+      +PK  ++  
Sbjct: 127 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE------VPKRKSL-- 178

Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
                           V T ++ APEVI  L +    D+WS+G +++E+  GE     + 
Sbjct: 179 ----------------VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYF 219

Query: 290 NLEHLAMMERVLGPLP 305
           N   L  M R+   LP
Sbjct: 220 NEPPLQAMRRIRDNLP 235

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 55.5 bits (133), Expect = 1e-08
 Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 52/214 (24%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQR---------- 144
           L K+G+G+FG+V +  DN  +++VAIKI+       E   I  EI VL +          
Sbjct: 9   LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 68

Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
                     +    +GG          P+D   +  + R++L+ + ++H  + IH D+K
Sbjct: 69  GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 128

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+LL     VK+ D+                           G  T      +  V T
Sbjct: 129 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNTFVGT 164

Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
             + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 165 PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 57/217 (26%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR-SIN-KYREAAMIEIDVLQR---------- 144
           L ++G G  G V +       +++A+K +R  IN   ++  + E+D+L +          
Sbjct: 6   LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFY 65

Query: 145 ----------LARHDIGGTR--------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHT 185
                     +    + G              P  ++ ++   +L+ + ++HE  ++IH 
Sbjct: 66  GAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHR 125

Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           D+KP NIL+ S   +K+ D+  +S                  +L++  + TF        
Sbjct: 126 DVKPSNILVNSRGQIKLCDFG-VSG-----------------QLVNSLAKTF-------- 159

Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
           V T  Y APE I G  ++   D+WS+G  L+EL +G 
Sbjct: 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 73/223 (32%)

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           +L++++ +H   +IH D+K ++ILL     VK+ D+ F ++ SK+    K+L        
Sbjct: 125 VLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL-------- 176

Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
                           V T ++ APE+I  L +    D+WS+G +++E+  GE  +    
Sbjct: 177 ----------------VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 220

Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 349
            L+ + M+   L P                                          +L N
Sbjct: 221 PLKAMKMIRDNLPP------------------------------------------KLKN 238

Query: 350 LIMQHVDHSAGDLID-LLQGLLRYDPAERLKAREALRHPFFTR 391
           L      H     +   L  LL  DPA+R  A E L+HPF  +
Sbjct: 239 L------HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 13/121 (10%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDGSYFKNLPKSSAIKLIDFGS 234
           +H+L  IH D+KP+N+LL +  +VK+ D+   +  + +    +++NL  +       F +
Sbjct: 117 IHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDF-SFQN 175

Query: 235 TTFEHQDHSY----------VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
              + +  ++           V T  Y APEV +  G+N  CD WS+G I+ E+  G   
Sbjct: 176 MNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235

Query: 285 F 285
           F
Sbjct: 236 F 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 58/219 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKI--VRSINKYREAAMI--EIDVLQRL---- 145
              +  +G GTFG+V    D   +   A+K+  +  + + ++   +  E  VL+ +    
Sbjct: 3   LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPF 62

Query: 146 ------ARHD-----------IGGTRY------RSFPIDLVRELGRQLLESVAFMHELRL 182
                   HD            GG  +        F          +++ ++ ++H   +
Sbjct: 63  IIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEI 122

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ DLKPENILL    ++K+ D+ F                  A KL D   T       
Sbjct: 123 VYRDLKPENILLDKEGHIKLTDFGF------------------AKKLRDRTWT------- 157

Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
             +  T  Y APEVI   G N   D W++G ++ E+  G
Sbjct: 158 --LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 54.7 bits (131), Expect = 2e-08
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 24/130 (18%)

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +N+LL     VK+ D+ F ++                 
Sbjct: 122 RECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQ----------------- 164

Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
                   T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE  +  
Sbjct: 165 -------ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217

Query: 288 HENLEHLAMM 297
              L  L ++
Sbjct: 218 ENPLRALYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 73/244 (29%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD- 149
           T  + I+  +G+GT+G+V +  + +   L A+KI+  I+   E    E ++LQ L  H  
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPN 80

Query: 150 --------------IGGTRYRSFPI-------DLVREL---GRQLLESV----------- 174
                         +GG  +    +       +LV+ L   G++L E++           
Sbjct: 81  VVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG 140

Query: 175 -AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
              +H  R+IH D+K  NILL +                              +KL+DFG
Sbjct: 141 LQHLHNNRIIHRDVKGNNILLTT---------------------------EGGVKLVDFG 173

Query: 234 ST---TFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGE-AL 284
            +   T      +  V T  + APEVI         ++  CD+WS+G   +EL  G+  L
Sbjct: 174 VSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233

Query: 285 FQTH 288
           F  H
Sbjct: 234 FDMH 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 58/229 (25%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMI--EIDVLQRLARH- 148
           + +L  +G+G FG+V      + K++ A+K +      +      +  E  +LQ L  H 
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHP 60

Query: 149 ----------DI------------GGTRY-----RSFPIDLVRELGRQLLESVAFMHELR 181
                     D             G  RY       F  + V+    +++ ++ ++H   
Sbjct: 61  FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +IH D+KP+NILL    +V + D+              N+    A K+    + T     
Sbjct: 121 IIHRDIKPDNILLDEQGHVHITDF--------------NI----ATKVTP-DTLTTS--- 158

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
                 T  Y APEV+   G++   D WS+G    E   G+  ++ H  
Sbjct: 159 ---TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR 204

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 59/239 (24%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---IN-KYREAAMIEIDVLQRLARHDI----- 150
           +G+G+FG+V+        +  A+K+++    +N K ++  M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG       R RSFP    R    ++  ++ ++H + +++ DL
Sbjct: 63  YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           KPENILL S  +V + D+       K+G           I   D  +TTF          
Sbjct: 123 KPENILLDSQGHVVLTDFGL----CKEG-----------IAQSD-TTTTF--------CG 158

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF---QTHENLEHLAMMERVLGP 303
           T  Y APEVI    ++   D W +G +L E+  G   F      E  +++     VL P
Sbjct: 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP 217

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 53.9 bits (129), Expect = 4e-08
 Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 71/232 (30%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + ++  +G GT+GQV +    +  +L AIK++       E   +EI++L++ + H    T
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIAT 77

Query: 154 RYRSF-----------------------PIDLVRE-------------LGRQLLESVAFM 177
            Y +F                         DLV+              + R++L  +A +
Sbjct: 78  YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H  ++IH D+K +N+LL                            +++ +KL+DFG S  
Sbjct: 138 HAHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQ 170

Query: 237 FEHQ--DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 281
            +      +  + T ++ APEVI         ++Y  D+WS+G   +E+  G
Sbjct: 171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 52.6 bits (127), Expect = 8e-08
 Identities = 43/223 (19%), Positives = 77/223 (34%), Gaps = 62/223 (27%)

Query: 95  RILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARH 148
            +  K+GEG FG+V +       + K+  VA+K ++     ++      E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 149 D-----IG-------------------------GTRYRSFPIDLVRELGRQLLESVAFMH 178
                 +G                           R +   +  +     Q+   + ++ 
Sbjct: 61  PNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE 120

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
               IH DL   N L+     VK+ D  F LSR   D  Y+K       I+         
Sbjct: 121 SKNFIHRDLAARNCLVGENLVVKISD--FGLSRDLYDDDYYKVKGGKLPIR--------- 169

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                        + APE +    +    D+WS G +L E+ +
Sbjct: 170 -------------WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 52.4 bits (125), Expect = 1e-07
 Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 71/232 (30%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + ++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H    T
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 154 RYRSF-----------------------PIDLVRE-------------LGRQLLESVAFM 177
            Y +F                         DL++              + R++L  ++ +
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+ ++IH D+K +N+LL                            +++ +KL+DFG +  
Sbjct: 128 HQHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQ 160

Query: 238 EHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 281
             +     +  + T ++ APEVI         +++  DLWS+G   +E+  G
Sbjct: 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 66/329 (20%), Positives = 111/329 (33%), Gaps = 115/329 (34%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYR--EAAMIEIDVLQRLARHDI----- 150
           +G+G+FG+V+        EL A+K+++   I +    E  M E  VL    +H       
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLH 62

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG       R   F     R    +++  + F+HE  +I+ DL
Sbjct: 63  SCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K +N+LL S  ++K+ D+       K+G              I  G TT      S    
Sbjct: 123 KLDNVLLDSEGHIKIADFGM----CKEG--------------ILGGVTT------STFCG 158

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERVLGPLP 305
           T  Y APE++    +    D W++G +L E+ +G++ F     + L    + + V    P
Sbjct: 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR--YP 216

Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
             +   A                                                    +
Sbjct: 217 RWLSKEA--------------------------------------------------KSI 226

Query: 366 LQGLLRYDPAERLKA-----REALRHPFF 389
           L+  L  +P +RL       ++   HPFF
Sbjct: 227 LKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 51/234 (21%), Positives = 85/234 (36%), Gaps = 80/234 (34%)

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           + +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F 
Sbjct: 118 KHKIMHRDVKPSNILVNSRGEIKLCDF------------------GVSGQLIDSMANSF- 158

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG------------EALFQ 286
                  V TR Y +PE + G  +    D+WS+G  LVE+  G            EA+F 
Sbjct: 159 -------VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFG 211

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL- 345
              +        R +   P                            S   M A+++LL 
Sbjct: 212 RPVSEGEAKESHRPVSGHPP--------------------------DSPRPM-AIFELLD 244

Query: 346 --------RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                   +LP+         + +  D +   L+ +P ER   +E  +HPF  R
Sbjct: 245 YIVNEPPPKLPS------GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 50.6 bits (122), Expect = 4e-07
 Identities = 45/223 (20%), Positives = 78/223 (34%), Gaps = 63/223 (28%)

Query: 95  RILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
            +  K+GEG FG+V +        +KK  VA+K ++  +  +  E  + E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 149 D---------IGGTRY------------RSF---------PIDLVRELGRQLLESVAFMH 178
                                        S+           DL+     Q+   + ++ 
Sbjct: 61  PNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLL-SFALQIARGMEYLE 119

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
               IH DL   N L+     VK+ D  F LSR   D  Y++       I+         
Sbjct: 120 SKNFIHRDLAARNCLVGENLVVKISD--FGLSRDLYDDDYYRKRGGKLPIR--------- 168

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                        + APE +    +    D+WS G +L E+ +
Sbjct: 169 -------------WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 25/129 (19%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H+ R+++ DLKPENILL    ++++ D               ++P+   IK    G   
Sbjct: 118 LHQERIVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK----GR-- 161

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                    V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       
Sbjct: 162 ---------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 212

Query: 297 MERVLGPLP 305
           +ER++  + 
Sbjct: 213 VERLVKEVQ 221

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 24/132 (18%)

Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  P +  R    ++  ++ F+HE  +I+ DLK +N+LL +  ++K+ DY       K
Sbjct: 89  RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGM----CK 144

Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
           +G              +  G TT      S    T +Y APE++ G  + +  D W++G 
Sbjct: 145 EG--------------LGPGDTT------STFCGTPNYIAPEILRGEEYGFSVDWWALGV 184

Query: 274 ILVELCSGEALF 285
           ++ E+ +G + F
Sbjct: 185 LMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 24/132 (18%)

Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  P +  R    ++  ++ ++HE  +I+ DLK +N+LL S  ++K+ DY       K
Sbjct: 89  RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM----CK 144

Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
           +G              +  G TT      S    T +Y APE++ G  + +  D W++G 
Sbjct: 145 EG--------------LRPGDTT------STFCGTPNYIAPEILRGEDYGFSVDWWALGV 184

Query: 274 ILVELCSGEALF 285
           ++ E+ +G + F
Sbjct: 185 LMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 79/349 (22%), Positives = 127/349 (36%), Gaps = 110/349 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSI---NKYREAAMIEIDVLQRLAR 147
            ++ +  +G+G  G+V         +L A+K++  + +   NK +     E ++L  L  
Sbjct: 2   HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVL-TEQEILATL-D 59

Query: 148 HDIGGTRYRSFPI--------------DLVRELGRQ----LLESVA------------FM 177
           H    T Y SF                +L R L RQ    L E VA            ++
Sbjct: 60  HPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYL 119

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDY----------KFLSRSSKDGSYFKNLPKSS-- 225
           H L +++ DLKPENILL  + ++ + D+            +S++ + GS   ++      
Sbjct: 120 HLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSE 179

Query: 226 -AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
              +   F S +F        V T  Y APEVI G G     D W++G +L E+  G   
Sbjct: 180 TFSEEPSFRSNSF--------VGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP 231

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F                         +   R E +                        +
Sbjct: 232 F-------------------------KGSNRDETFSN----------------------I 244

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL----KAREALRHPFF 389
           L+           S+    DL++ LL  DP++RL     A E  +HPFF
Sbjct: 245 LKKEVTFPGSPPVSS-SARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 50.4 bits (120), Expect = 6e-07
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 28/140 (20%)

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
            P D+ R    +++ ++  +H+L  +H D+KP+N+LL    ++++ D+    + ++DG+ 
Sbjct: 99  LPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158

Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVG 272
                                    S  V T  Y +PE++     G+G   P CD WS+G
Sbjct: 159 -----------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 195

Query: 273 CILVELCSGEALFQTHENLE 292
             + E+  GE  F     +E
Sbjct: 196 VCMYEMLYGETPFYAESLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 50.5 bits (120), Expect = 6e-07
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 64/217 (29%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARH---- 148
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQR+ +H    
Sbjct: 30  LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSI 88

Query: 149 DIGGTRYRSFPIDLVRE------------------------LGRQLLESVAFMHELRLIH 184
           +  G   R     LV E                        +    L+ +A++H   +IH
Sbjct: 89  EYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH 148

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NILL                            +   +KL DFGS +     +S+
Sbjct: 149 RDIKAGNILLT---------------------------EPGQVKLADFGSASIASPANSF 181

Query: 245 VVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVEL 278
            V T ++ APEVIL +    ++   D+WS+G   +EL
Sbjct: 182 -VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 50.4 bits (120), Expect = 8e-07
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 24/117 (20%)

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           F+H   +++ DLK +NILL +  ++K+ D+     +                 L D  + 
Sbjct: 111 FLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKEN----------------MLGDAKTC 154

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
           TF          T  Y APE++LG  +N   D WS G +L E+  G++ F  H+  E
Sbjct: 155 TF--------CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 50.0 bits (119), Expect = 9e-07
 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 27/138 (19%)

Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R + FP D+      Q++    ++  L +++ DLKPEN+LL                  K
Sbjct: 124 RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL-----------------DK 166

Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
           DG           IK+ DFG           +  T  Y APE++L +G     D W++G 
Sbjct: 167 DG----------FIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGI 216

Query: 274 ILVELCSGEALFQTHENL 291
            + E+  G   F  +E L
Sbjct: 217 FIYEILVGCPPFYANEPL 234

Length = 340

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 55/250 (22%)

Query: 156 RSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
           +  P +++ ++   +L  +A++ E  +++H D+KP NIL+ S   +K+ D+         
Sbjct: 98  KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDF--------- 148

Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
                      + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  
Sbjct: 149 ---------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLS 191

Query: 275 LVELCSGEALFQTHENLEHLAMMERVL----GPLPHHMVIRADRRAEKYFRRGARLDWPD 330
           LVEL  G       +  E  A+  R +       PH +  R         R   R     
Sbjct: 192 LVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRP--------RPPGRPVSGH 243

Query: 331 GATSRDSMRAVWKLL---------RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR 381
           G  SR +M A+++LL         +LPN +         D  + +   L  +PAER   +
Sbjct: 244 GMDSRPAM-AIFELLDYIVNEPPPKLPNGVF------TPDFQEFVNKCLIKNPAERADLK 296

Query: 382 EALRHPFFTR 391
             + H F  R
Sbjct: 297 MLMNHTFIKR 306

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 28/128 (21%)

Query: 155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
           YR  P  ++  +   +++ + ++  L+++H D+KP N+L+ +   VK             
Sbjct: 89  YRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVK------------- 135

Query: 215 GSYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
                         L DFG ST   +      V T  Y APE I G  +    D+WS+G 
Sbjct: 136 --------------LCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGI 181

Query: 274 ILVELCSG 281
             +EL  G
Sbjct: 182 SFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 61/261 (23%), Positives = 102/261 (39%), Gaps = 68/261 (26%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRY 155
           +G+G+FG+V+      K E  A+K ++     I+   E  M+E  VL     +      Y
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62

Query: 156 RSFPI--------------DL---VRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F                DL   +++ GR           +++  + F+H   +I+ DL
Sbjct: 63  CTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEHQDHSY 244
           K +N++L                  +DG           IK+ DFG      F     S 
Sbjct: 123 KLDNVML-----------------DRDGH----------IKIADFGMCKENVFGDNRAST 155

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 304
              T  Y APE++ GL + +  D WS G +L E+  G++ F   +  E   + E +    
Sbjct: 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESIRVDT 212

Query: 305 PHH---MVIRADRRAEKYFRR 322
           PH+   +   +    EK F R
Sbjct: 213 PHYPRWITKESKDILEKLFER 233

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 56/225 (24%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDI----- 150
           +G+G+FG+V+      +++  A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG       R R F     R    ++  ++ ++H L +++ DL
Sbjct: 63  FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           KPENILL S  ++ + D+     +                  I+   TT      S    
Sbjct: 123 KPENILLDSQGHIVLTDFGLCKEN------------------IEHNGTT------STFCG 158

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
           T  Y APEV+    ++   D W +G +L E+  G   F +    E
Sbjct: 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 66/241 (27%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-------EAAMIEIDVLQRLARHDI-- 150
           +G+G FG+V  C      +L A K    +NK R       E AM+E  +L ++    I  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACK---KLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVS 57

Query: 151 --------------------GGTRYRSFPIDLVRE---------LGRQLLESVAFMHELR 181
                               G  RY  + +D                Q++  +  +H+ R
Sbjct: 58  LAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR 117

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLKPEN+LL +   V++ D                     A++L D  S T  +  
Sbjct: 118 IIYRDLKPENVLLDNDGNVRISDLGL------------------AVELKDGQSKTKGY-- 157

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAMMERV 300
                 T  + APE++ G  +++  D +++G  L E+ +    F+   E +E+  + +R+
Sbjct: 158 ----AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213

Query: 301 L 301
           L
Sbjct: 214 L 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 28/140 (20%)

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
            P D+ R    +++ ++  +H+L  +H D+KP+NIL+    ++++ D+            
Sbjct: 99  LPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADF------------ 146

Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVG 272
                  S +KL++ G+        S  V T  Y +PE++     G G   P CD WS+G
Sbjct: 147 ------GSCLKLMEDGTV-----QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLG 195

Query: 273 CILVELCSGEALFQTHENLE 292
             + E+  GE  F     +E
Sbjct: 196 VCMYEMLYGETPFYAESLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 56/255 (21%), Positives = 89/255 (34%), Gaps = 67/255 (26%)

Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  PID    + +Q+LE + ++H  R+IH D+K ENI +                   
Sbjct: 150 RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV---------------- 193

Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSV 271
                        + + D G+  F     ++  +  T    APEV+    +N   D+WS 
Sbjct: 194 -----------DQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSA 242

Query: 272 GCILVEL------------CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKY 319
           G +L E+             + E   ++  +  HL  +   L   P         R  + 
Sbjct: 243 GIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS--HLLKIISTLKVHPEEFPRDPGSRLVRG 300

Query: 320 FRRGARLDWPDGATSRDSMRAVWKLLRLPNL---IMQHVD-HSAGDLIDLLQGLLRYDPA 375
           F   A L+                  R P       Q V+    G+   L+  +L +D A
Sbjct: 301 FIEYASLE------------------RQPYTRYPCFQRVNLPIDGEF--LVHKMLTFDAA 340

Query: 376 ERLKAREALRHPFFT 390
            R  A E L +P F 
Sbjct: 341 MRPSAEEILNYPMFA 355

Length = 357

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 64/217 (29%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARH---- 148
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTI 78

Query: 149 DIGGTRYRSFPIDLVRE------------------------LGRQLLESVAFMHELRLIH 184
              G   R     LV E                        +    L+ +A++H   +IH
Sbjct: 79  QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NILL                            +   +KL DFGS +     + +
Sbjct: 139 RDVKAGNILLS---------------------------EPGLVKLGDFGSASIMAPANXF 171

Query: 245 VVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVEL 278
            V T ++ APEVIL +    ++   D+WS+G   +EL
Sbjct: 172 -VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 27/121 (22%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +++ ++  +H +  IH D+KP+N+LL  + ++K+ D+    +   +G             
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV----------- 198

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEAL 284
                       D +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  
Sbjct: 199 ----------RCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246

Query: 285 F 285
           F
Sbjct: 247 F 247

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 24/132 (18%)

Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  P +  R    ++  ++ F+HE  +I+ DLK +N+LL +  ++K+ DY       +
Sbjct: 89  RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR 148

Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
            G                  ++TF          T +Y APE++ G  + +  D W++G 
Sbjct: 149 PGDT----------------TSTF--------CGTPNYIAPEILRGEDYGFSVDWWALGV 184

Query: 274 ILVELCSGEALF 285
           ++ E+ +G + F
Sbjct: 185 LMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 48.4 bits (115), Expect = 3e-06
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 25/121 (20%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+   +  +H + +++ D+KPEN+LL      ++ D                     A++
Sbjct: 103 QITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGL------------------AVE 144

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L D  + T           T  Y APE++    ++YP D +++GC + E+ +G   F+ H
Sbjct: 145 LKDGKTITQR-------AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH 197

Query: 289 E 289
           +
Sbjct: 198 K 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 27/128 (21%)

Query: 159 PIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           P++++ ++   ++E + +++   R++H D+KP NIL+ S   +K+ D+            
Sbjct: 101 PVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDF------------ 148

Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
                   + +LI+  + TF        V T  Y +PE I G  +    D+WS+G  ++E
Sbjct: 149 ------GVSGELINSIADTF--------VGTSTYMSPERIQGGKYTVKSDVWSLGISIIE 194

Query: 278 LCSGEALF 285
           L  G+  F
Sbjct: 195 LALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 25/114 (21%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H+  +I+ DLKPENILL +  +VK+ D+               L K S    I  G+ T
Sbjct: 116 LHQQGIIYRDLKPENILLDAQGHVKLTDF--------------GLCKES----IHEGTVT 157

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
                H++   T  Y APE+++  G     D WS+G ++ ++ +G   F T EN
Sbjct: 158 -----HTF-CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF-TAEN 204

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 33/126 (26%)

Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
           R + +QLL +V ++H+ +LIH D+K ENI L                 + DG        
Sbjct: 270 RAIMKQLLCAVEYIHDKKLIHRDIKLENIFL-----------------NCDGK------- 305

Query: 224 SSAIKLIDFGS-TTFEHQ----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
              I L DFG+   FE +    D+ +V  T    +PE++ G G+    D+WS G IL+++
Sbjct: 306 ---IVLGDFGTAMPFEKEREAFDYGWV-GTVATNSPEILAGDGYCEITDIWSCGLILLDM 361

Query: 279 CSGEAL 284
            S +  
Sbjct: 362 LSHDFC 367

Length = 501

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 47.9 bits (114), Expect = 3e-06
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 39/162 (24%)

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           F    VR    +++ ++  +H+L +I+ D+K ENILL                   +G  
Sbjct: 102 FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL-----------------DSEGH- 143

Query: 218 FKNLPKSSAIKLIDFG-STTF----EHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWS 270
                    + L DFG S  F    E + +S+   T  Y APEVI G   G +   D WS
Sbjct: 144 ---------VVLTDFGLSKEFLAEEEERAYSF-CGTIEYMAPEVIRGGSGGHDKAVDWWS 193

Query: 271 VGCILVELCSGEALFQTH-ENLEHLAMMERVLG---PLPHHM 308
           +G +  EL +G + F    E      +  R+L    P P  M
Sbjct: 194 LGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 48.0 bits (114), Expect = 4e-06
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 62/232 (26%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDI----- 150
           +G+G+FG+V+           A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG       R R F     R    ++  ++ ++H L +I+ DL
Sbjct: 63  YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           KPENILL S  +V + D+       K+G              ++   TT      S    
Sbjct: 123 KPENILLDSQGHVVLTDFGL----CKEG--------------VEPEETT------STFCG 158

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF------QTHENLEH 293
           T  Y APEV+    ++   D W +G +L E+  G   F      Q ++N+ H
Sbjct: 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH 210

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 47.6 bits (113), Expect = 5e-06
 Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 68/275 (24%)

Query: 93  RY-RILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL 145
           RY + +  +GEG FG+V + C+D   +   E+VA+K ++     +       EI++L+ L
Sbjct: 4   RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL 63

Query: 146 ARHDIGGTRYRS----------------FPIDLVRE--------------LGRQLLESVA 175
              +I   +Y+                  P+  +R+                +Q+ E +A
Sbjct: 64  YHENI--VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMA 121

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++H    IH DL   N+LL +   VK+ D+  L+++  +G  +  + +       D  S 
Sbjct: 122 YLHSQHYIHRDLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSP 173

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
            F             + A E +    ++Y  D+WS G  L EL     L           
Sbjct: 174 VF-------------WYAVECLKENKFSYASDVWSFGVTLYEL-----LTHCDSKQSPPK 215

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
             E ++GP    M +    R  +   RG RL  P 
Sbjct: 216 KFEEMIGPKQGQMTV---VRLIELLERGMRLPCPK 247

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 47.1 bits (112), Expect = 6e-06
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 25/110 (22%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H  R+++ DLKPENILL    ++++ D   L+    +G   +                 
Sbjct: 118 LHRERIVYRDLKPENILLDDYGHIRISDLG-LAVEIPEGETIRGR--------------- 161

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
                    V T  Y APEV+    + +  D W +GC++ E+  G++ F+
Sbjct: 162 ---------VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 61/224 (27%)

Query: 13  NMDKRPRKRPRLTWDVP---PPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTG 69
               RPR+RP LT  +P   P L  P  LP             P  + SS    +     
Sbjct: 19  TTKSRPRRRPDLTLPLPQRDPSLAVPLPLP-------------PPSSSSSSSSSSSASGS 65

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK------ 123
           +P                 +L+   R+ +++G G  G V +        L A+K      
Sbjct: 66  APSAAK-------------SLSELERV-NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH 111

Query: 124 -------------IVRSINK---------YREAAMIEIDVLQRLARHDIGGTRYRSFPID 161
                        I+R +N          +     I++ +L+ +    + GT        
Sbjct: 112 EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV-LLEFMDGGSLEGTHIADEQ-- 168

Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 205
            + ++ RQ+L  +A++H   ++H D+KP N+L+ SA+ VK+ D+
Sbjct: 169 FLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADF 212

Length = 353

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 46.9 bits (111), Expect = 6e-06
 Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 58/246 (23%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDI 150
           Y  +  +G+G++G+V         +   IK   +  +  + R+AA  E  +L +L   +I
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI 61

Query: 151 ----------------------GGTRYRSF--------PIDLVRELGRQLLESVAFMHEL 180
                                 GG  Y           P + V E   Q+  ++ ++HE 
Sbjct: 62  VAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLK +N+ L     +KV D   ++R  ++                D  ST     
Sbjct: 122 HILHRDLKTQNVFLTRTNIIKVGDLG-IARVLENQC--------------DMAST----- 161

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE-NLEHLAMMER 299
               ++ T +Y +PE+     +NY  D+W++GC + E+ + +  F   + N     ++E 
Sbjct: 162 ----LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG 217

Query: 300 VLGPLP 305
            L P+P
Sbjct: 218 KLPPMP 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 72/234 (30%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH----D 149
           + I+  +G+GT+G+V +  + +     A+KI+  I+   E    E ++L+ L+ H     
Sbjct: 20  WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVK 79

Query: 150 IGGTRYRSFPID-----LVREL----------------GRQLLES-VAF----------- 176
             G  Y+    +     LV EL                G ++ E  +A+           
Sbjct: 80  FYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQH 139

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST- 235
           +H  + IH D+K  NILL +                              +KL+DFG + 
Sbjct: 140 LHVNKTIHRDVKGNNILLTT---------------------------EGGVKLVDFGVSA 172

Query: 236 --TFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGE 282
             T      +  V T  + APEVI     L   ++  CD+WS+G   +EL  G+
Sbjct: 173 QLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD 226

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 25/113 (22%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +   R+++ DLKPENILL    ++++ D     +          +P+   ++    G   
Sbjct: 118 LQRERIVYRDLKPENILLDDRGHIRISDLGLAVQ----------IPEGETVR----GR-- 161

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
                    V T  Y APEVI    + +  D W +GC++ E+  G++ F+  +
Sbjct: 162 ---------VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 46.9 bits (111), Expect = 8e-06
 Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 64/217 (29%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARH---- 148
           L ++G G+FG V    ++   E+VA+K +    +  N+  +  + E+  LQ+L +H    
Sbjct: 26  LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTI 84

Query: 149 DIGGTRYRSFPIDLVRE--LGRQ----------------------LLESVAFMHELRLIH 184
           +  G   +     LV E  LG                         L+ +A++H   +IH
Sbjct: 85  EYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH 144

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NILL                            +   +KL DFGS +     +S+
Sbjct: 145 RDIKAGNILLT---------------------------EPGQVKLADFGSASKSSPANSF 177

Query: 245 VVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVEL 278
            V T ++ APEVIL +    ++   D+WS+G   +EL
Sbjct: 178 -VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 47.1 bits (112), Expect = 8e-06
 Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 64/237 (27%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRY 155
           +G+G+FG+V+        E  AIK ++      +   E  M+E  VL     H      +
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF 62

Query: 156 RSFPI--------------DL---VRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F                DL   ++  GR           +++  + F+H+  +I+ DL
Sbjct: 63  CTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSY 244
           K +N+LL                  KDG           IK+ DFG            S 
Sbjct: 123 KLDNVLL-----------------DKDGH----------IKIADFGMCKENMNGEGKAST 155

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMER 299
              T  Y APE++ G  +N   D WS G +L E+  G++ F  +  + L    + +R
Sbjct: 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR 212

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 49/236 (20%), Positives = 80/236 (33%), Gaps = 76/236 (32%)

Query: 156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
                  V+++ RQL+E++  +H+  +IH D+K EN+L                      
Sbjct: 104 GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL---------------------- 141

Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 275
            Y +   +   I L D+G          Y   T  Y +PE I G  ++   D W+VG + 
Sbjct: 142 -YDRAKDR---IYLCDYGLCKIIGTPSCY-DGTLDYFSPEKIKGHNYDVSFDWWAVGVLT 196

Query: 276 VELCSGEALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
            EL +G+  F+  E+ E  L  + +                         R         
Sbjct: 197 YELLTGKHPFKEDEDEELDLESLLK-------------------------RQQKKLPFIK 231

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-KAREALRHPFF 389
             S  A                       D +Q +L+Y+   RL    E ++HPF 
Sbjct: 232 NVSKNAN----------------------DFVQSMLKYNINYRLTNYNEIIKHPFL 265

Length = 267

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 35/150 (23%)

Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
           D++  ++ +D+     R +  ++V  L          +H +  IH D+KP+N+LL  + +
Sbjct: 129 DLVNLMSNYDVPEKWARFYTAEVVLALDA--------IHSMGFIHRDVKPDNMLLDKSGH 180

Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG 259
           +K+ D+    + +K+G    +                         V T  Y +PEV+  
Sbjct: 181 LKLADFGTCMKMNKEGMVRCDT-----------------------AVGTPDYISPEVLKS 217

Query: 260 LG----WNYPCDLWSVGCILVELCSGEALF 285
            G    +   CD WSVG  L E+  G+  F
Sbjct: 218 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 51/222 (22%), Positives = 82/222 (36%), Gaps = 61/222 (27%)

Query: 97  LSKMGEGTFGQVVEC----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDI 150
           + ++GEG FG+V  C      +   E VA+K +      ++R     EI++L+ L   +I
Sbjct: 9   IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68

Query: 151 GGTRYRSFP-----IDLVRE-------------------LGRQLLESV------AFMHEL 180
              +          + L+ E                   L R LL S        ++   
Sbjct: 69  VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ 128

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSR--SSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           R IH DL   NIL+ S + VK+ D+  L++        Y+   P  S I           
Sbjct: 129 RYIHRDLAARNILVESEDLVKISDFG-LAKVLPEDKDYYYVKEPGESPIF---------- 177

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                       + APE +    ++   D+WS G  L EL +
Sbjct: 178 ------------WYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 51/219 (23%), Positives = 79/219 (36%), Gaps = 79/219 (36%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           MH   +++ DLKP NILL    +V++ D            + K  P +S           
Sbjct: 113 MHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS----------- 155

Query: 237 FEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
                    V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+  +   
Sbjct: 156 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 206

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           +                DR           ++ PD  +                      
Sbjct: 207 I----------------DRMTLT-----MAVELPDSFSP--------------------- 224

Query: 356 DHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
                +L  LL+GLL+ D   RL      A+E   HPFF
Sbjct: 225 -----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 46/217 (21%), Positives = 90/217 (41%), Gaps = 57/217 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDI- 150
           Y ++ ++G GT+G V +  +    EL A+KI++ +    + ++I  EI +++     +I 
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTGELAAVKIIK-LEPGDDFSLIQQEIFMVKECKHCNIV 69

Query: 151 --------------------GGTRYRSFPID------LVRELGRQLLESVAFMHELRLIH 184
                               GG+    + +        +  + R+ L+ +A++H    +H
Sbjct: 70  AYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMH 129

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NILL     VK+ D+   ++ +   +  K+                        
Sbjct: 130 RDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSF----------------------- 166

Query: 245 VVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVEL 278
            + T ++ APEV       G+N  CD+W+VG   +EL
Sbjct: 167 -IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 49/233 (21%), Positives = 93/233 (39%), Gaps = 53/233 (22%)

Query: 99  KMGEGTFGQVVE-CFDNEKKEL-VAIKIVRSINK--YREAAMIEIDVLQRLAR------- 147
           ++G G FG V +  +   KK++ VAIK++++ N+   R+  M E +++ +L         
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 148 --------------------HDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                               +     +     +  V EL  Q+   + ++     +H DL
Sbjct: 62  GVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDL 121

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
              N+LLV+  Y K+ D+        D SY+K   +S        G    +         
Sbjct: 122 AARNVLLVNQHYAKISDFGLSKALGADDSYYK--ARS-------AGKWPLK--------- 163

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
              + APE I    ++   D+WS G  + E  S G+  ++  +  E ++ +E+
Sbjct: 164 ---WYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 45/228 (19%), Positives = 94/228 (41%), Gaps = 58/228 (25%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--------- 144
           + ++ ++G GT+G V +  +    EL AIK+++ +    + A+++ +++           
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTGELAAIKVIK-LEPGEDFAVVQQEIIMMKDCKHSNIV 69

Query: 145 ------LARHDI--------GGTRYRSFPID------LVRELGRQLLESVAFMHELRLIH 184
                 L R  +        GG+    + +        +  + R+ L+ + ++H    +H
Sbjct: 70  AYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMH 129

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NILL    +VK+ D+   ++ +   +  K+                        
Sbjct: 130 RDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF----------------------- 166

Query: 245 VVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGE-ALFQTH 288
            + T ++ APEV       G+N  CD+W+VG   +EL   +  +F  H
Sbjct: 167 -IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 44.4 bits (106), Expect = 4e-05
 Identities = 45/225 (20%), Positives = 82/225 (36%), Gaps = 64/225 (28%)

Query: 95  RILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
            +  K+GEG FG+V +          +  VA+K ++  +  + RE  + E  ++++L  H
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL-SH 60

Query: 149 D-----IG-----GTRY-----------RSF---------PIDLVRELGRQLLESVAFMH 178
                 +G        Y             F           DL+ ++  Q+ + + ++ 
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLL-QMALQIAKGMEYLE 119

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKS-SAIKLIDFGSTT 236
               +H DL   N L+     VK+ D  F LSR   +  Y++        IK        
Sbjct: 120 SKNFVHRDLAARNCLVTENLVVKISD--FGLSRDIYEDDYYRKRGGGKLPIK-------- 169

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                         + APE +    +    D+WS G +L E+ + 
Sbjct: 170 --------------WMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 54/254 (21%), Positives = 86/254 (33%), Gaps = 92/254 (36%)

Query: 147 RHDIGGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 200
           +H  GG       ++ + P + V+    +++ ++  +H   ++  DL P NILL    ++
Sbjct: 65  QHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHI 124

Query: 201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL 260
           ++             +YF                +  E       V    Y APEV    
Sbjct: 125 QL-------------TYFSRW-------------SEVEDSCDGEAVE-NMYCAPEVGGIS 157

Query: 261 GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYF 320
                CD WS+G IL EL +G+ L + H                                
Sbjct: 158 EETEACDWWSLGAILFELLTGKTLVECH-------------------------------- 185

Query: 321 RRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA 380
                   P G  +  +       L +P    + V   A  L+   Q LL+++P ERL A
Sbjct: 186 --------PSGINTHTT-------LNIP----EWVSEEARSLL---QQLLQFNPTERLGA 223

Query: 381 REA-----LRHPFF 389
             A       HPFF
Sbjct: 224 GVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 24/110 (21%)

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++HE ++++ DLK +N+LL +  +VK+ D+       K+G              + FG  
Sbjct: 116 YLHENKIVYRDLKLDNLLLDTEGFVKIADFGL----CKEG--------------MGFGDR 157

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           T      S    T  + APEV+    +    D W +G ++ E+  GE+ F
Sbjct: 158 T------STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 56/224 (25%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
           +  L  +G+G+FG+V+        EL AIKI++      +   E  M+E  VL    +  
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP 61

Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
                H    T  R + +       DL   ++++G+           ++   + F+H   
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N++L +  ++K+ D+     +   G   +                TF    
Sbjct: 122 IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR----------------TF---- 161

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
                 T  Y APE+I    +    D W+ G +L E+ +G+  F
Sbjct: 162 ----CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 44.4 bits (105), Expect = 7e-05
 Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 50/212 (23%)

Query: 93  RYRILSKMGEGTFGQVVEC--FDNEKKELVAIK----------------------IVRSI 128
           +Y ILS +  G+ G+V  C    +E+++ V +K                      I+  I
Sbjct: 93  QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLI 152

Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDL--VRELGRQLLESVAFMHELRLIHTD 186
           + YR  + + +  +    + D+     RS P+ L     + R+LLE++A++H   +IH D
Sbjct: 153 HAYRWKSTVCM--VMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRD 210

Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           +K ENI L   E   + D+                   +A KL    +     Q + +  
Sbjct: 211 VKTENIFLDEPENAVLGDF------------------GAACKL---DAHPDTPQCYGW-S 248

Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
            T    +PE++    +    D+WS G +L E+
Sbjct: 249 GTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280

Length = 392

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 44.2 bits (104), Expect = 8e-05
 Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 39/119 (32%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS-- 234
           +H + LIH D+KP+N+LL                            K   +KL DFG+  
Sbjct: 158 IHSMGLIHRDVKPDNMLL---------------------------DKHGHLKLADFGTCM 190

Query: 235 ----TTFEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 285
               T     D +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 191 KMDETGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 8e-05
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 28/132 (21%)

Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           P D+ R    +++ ++  +H+L  +H D+KP+N+LL    ++++ D+             
Sbjct: 100 PEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADF------------- 146

Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGC 273
                 S ++L+  G+        +  V T  Y +PE++  +      +   CD WS+G 
Sbjct: 147 -----GSCLRLLADGTV-----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGV 196

Query: 274 ILVELCSGEALF 285
            + E+  GE  F
Sbjct: 197 CMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 43.7 bits (103), Expect = 9e-05
 Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 58/239 (24%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQRLARHDI----- 150
           +G+G+FG+V+        E+ AIK+++     +    +  M E  +L   A+H       
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG       R R F     R    ++  ++ F+H   +I+ DL
Sbjct: 63  CCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K +NILL +  + K+ D+        +G                  +TTF          
Sbjct: 123 KLDNILLDAEGHCKLADFGMCKEGILNGVT----------------TTTF--------CG 158

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT--HENLEHLAMMERVLGPL 304
           T  Y APE++  L +    D W++G ++ E+ +G+  F+    ++L    + + VL P+
Sbjct: 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 27/128 (21%)

Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    +++  +  MH   +++ DLKP NILL    +V++ D       SK        P
Sbjct: 99  MRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------P 152

Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
            +S                    V T  Y APEV+  G  ++   D +S+GC+L +L  G
Sbjct: 153 HAS--------------------VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192

Query: 282 EALFQTHE 289
            + F+ H+
Sbjct: 193 HSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 25/110 (22%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H    ++ DLKPENILL    ++++ D     +          +P+  +I+    G   
Sbjct: 118 LHRENTVYRDLKPENILLDDYGHIRISDLGLAVK----------IPEGESIR----GR-- 161

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
                    V T  Y APEV+    +    D W +GC++ E+  G++ F+
Sbjct: 162 ---------VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 49/227 (21%), Positives = 87/227 (38%), Gaps = 57/227 (25%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDI----- 150
           +G+G+FG+V+     E   L A+K+++      +   E  M E  +L     H       
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62

Query: 151 -----------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                            GG       + R F     R    ++  ++ F+H+  +I+ DL
Sbjct: 63  CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDL 122

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K +N+LL    + K+ D+        +G                  ++TF          
Sbjct: 123 KLDNVLLDHEGHCKLADFGMCKEGIFNGKT----------------TSTF--------CG 158

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 204

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 32/133 (24%)

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           F  D VR    +++ ++  +H+L +++ D+K ENILL S  +V                 
Sbjct: 102 FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVV---------------- 145

Query: 218 FKNLPKSSAIKLIDFG-STTF--EHQDHSY-VVSTRHYRAPEVILG-LGWNYPCDLWSVG 272
                      L DFG S  F  E ++ +Y    T  Y APE+I G  G     D WS+G
Sbjct: 146 -----------LTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLG 194

Query: 273 CILVELCSGEALF 285
            ++ EL +G + F
Sbjct: 195 ILIFELLTGASPF 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 59/237 (24%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI---- 150
           +++ K+G G FG+V     N   + VA+K ++      E+ + E  ++++L RHD     
Sbjct: 9   QLIKKLGNGQFGEVWMGTWNGNTK-VAVKTLKPGTMSPESFLEEAQIMKKL-RHDKLVQL 66

Query: 151 ---------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                      G  R    P +LV ++  Q+   +A++  +  I
Sbjct: 67  YAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLP-NLV-DMAAQVAAGMAYIERMNYI 124

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DL+  NIL+      K+ D+  L+R  +D  Y         IK               
Sbjct: 125 HRDLRSANILVGDGLVCKIADFG-LARLIEDNEYTARQGAKFPIK--------------- 168

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                  + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 169 -------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 218

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 75/335 (22%), Positives = 120/335 (35%), Gaps = 88/335 (26%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI--- 150
           + IL     G  G    C DN+  E V IK  +     R     E  +L+ +    I   
Sbjct: 94  FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQL 148

Query: 151 GGT------------RYRS-----------FPIDLVRELGRQLLESVAFMHELRLIHTDL 187
            GT            RY++             I  +  + R +L ++ ++HE R+IH D+
Sbjct: 149 KGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDI 208

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSY 244
           K ENI                         F N P    + L DFG+  F    + +  Y
Sbjct: 209 KAENI-------------------------FINHPGD--VCLGDFGAACFPVDINANKYY 241

Query: 245 -VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE-ALFQTH------ENLEHLAM 296
               T    APE++    +    D+WS G +L E+ +   +LF+        ++   + +
Sbjct: 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKL 301

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-SMRAVW-KLLRLPNLIMQH 354
           + R  G  P+   I A    ++ +   A+       +SR    R +W  L  LP      
Sbjct: 302 IIRRSGTHPNEFPIDAQANLDEIYIGLAK------KSSRKPGSRPLWTNLYELPI----- 350

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                 DL  L+  +L +D   R  A   L    F
Sbjct: 351 ------DLEYLICKMLAFDAHHRPSAEALLDFAAF 379

Length = 391

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 56/221 (25%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR----- 147
           L  +G+G+FG+V+        EL AIKI++      +   E  M+E  VL    +     
Sbjct: 5   LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLT 64

Query: 148 --HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELRLIH 184
             H    T  R + +       DL   ++++G+           ++   + F+H   +I+
Sbjct: 65  QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIY 124

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DLK +N++L S  ++K+ D+        DG                  + TF       
Sbjct: 125 RDLKLDNVMLDSEGHIKIADFGMCKEHMVDG----------------VTTRTF------- 161

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
              T  Y APE+I    +    D W+ G +L E+ +G+  F
Sbjct: 162 -CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 56/231 (24%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
           +  L  +G+G+FG+V+        EL AIKI++      +   E  M+E  VL    +  
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP 61

Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
                H    T  R + +       DL   ++++GR           ++   + F+H   
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG 121

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N++L S  ++K+ D+     +  DG   K                TF    
Sbjct: 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK----------------TF---- 161

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                 T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E
Sbjct: 162 ----CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 208

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 58/255 (22%), Positives = 93/255 (36%), Gaps = 72/255 (28%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIG--- 151
            L ++G GT GQV +    +   ++A+K + R+ NK  E   I +D+   L  HD     
Sbjct: 19  NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIV 77

Query: 152 ---GTRYRSFPIDLVRE---------------------LGRQLLESVAFMHELR----LI 183
              G       + +  E                     LG+  +  V  +H L+    +I
Sbjct: 78  KCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVI 137

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF--EHQD 241
           H D+KP NILL                             S  +KL DFG +    + + 
Sbjct: 138 HRDVKPSNILL---------------------------DASGNVKLCDFGISGRLVDSKA 170

Query: 242 HSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
            +       Y APE I        ++   D+WS+G  LVEL +G+  F          ++
Sbjct: 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ--FPYKNCKTEFEVL 228

Query: 298 ERVLGP----LPHHM 308
            ++L      LP + 
Sbjct: 229 TKILQEEPPSLPPNE 243

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 57/236 (24%)

Query: 95  RILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+  K+G+G FG+V +  ++   K  VAIK ++      EA + E  ++++L RHD    
Sbjct: 9   RLDVKLGQGCFGEVWMGTWNGTTK--VAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVP 65

Query: 154 RYRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIH 184
            Y      PI +V E                          +  Q+ + +A++  +  IH
Sbjct: 66  LYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIH 125

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DL+  NIL+      K+ D+  L+R  +D  Y         IK                
Sbjct: 126 RDLRAANILVGDNLVCKIADFG-LARLIEDNEYTARQGAKFPIK---------------- 168

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 169 ------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER 218

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 9   RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 66

Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 67  YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 126

Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 127 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 168

Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 169 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 218

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 46/238 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYR 156
           L ++G G FG V +        ++A+K +RS    +E         Q+    D+      
Sbjct: 9   LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKE---------QKRLLMDLDVVMRS 59

Query: 157 SFPIDLVRELGRQLLESVAFM-HEL---------RLIHTDLK---PENIL-LVSAEYVKV 202
           S    +V+  G    E   ++  EL         + ++  LK   PE IL  ++   VK 
Sbjct: 60  SDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKA 119

Query: 203 PDY-----KFLSRSSKDGSYFKNLPKSSAIKLIDFG------STTFEHQDHSYVVSTRHY 251
            +Y     K + R  K  +    L ++  IKL DFG       +  + +D       R Y
Sbjct: 120 LNYLKEELKIIHRDVKPSNIL--LDRNGNIKLCDFGISGQLVDSIAKTRD----AGCRPY 173

Query: 252 RAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENL-EHLAMMERVLGPLP 305
            APE I      G++   D+WS+G  L E+ +G+  +    ++ + L  +  V G  P
Sbjct: 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV--VKGDPP 229

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
             F I  + +   Q+   + ++   R IH DL   NILL S + VK+ D+  L R+    
Sbjct: 92  GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFG-LMRALPQN 150

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 68/289 (23%), Positives = 108/289 (37%), Gaps = 92/289 (31%)

Query: 100 MGEGTFGQVVE--CFDNEKKEL---VAIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
           +G G FG+VVE   +   K +    VA+K+++       REA M E+ ++  L  H    
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIV 102

Query: 149 DIGGTRYRSFPI----------DLVRELGR----------------QLLESVAFMHELRL 182
           ++ G      PI          DL+  L R                Q+ + +AF+     
Sbjct: 103 NLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNC 162

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           IH DL   N+LL   + VK+ D+  L+R   +                          D 
Sbjct: 163 IHRDLAARNVLLTHGKIVKICDFG-LARDIMN--------------------------DS 195

Query: 243 SYVV--STR---HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
           +YVV  + R    + APE I    + +  D+WS G +L E+ S                 
Sbjct: 196 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS----------------- 238

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 344
              LG  P+  +   D +  K  + G R+  P+ A +   D M+  W  
Sbjct: 239 ---LGSNPYPGMP-VDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDA 283

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 26/101 (25%)

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 124 KIMHRDVKPSNILVNSRGEIKLCDF------------------GVSGQLIDSMANSF--- 162

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 163 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 63/224 (28%)

Query: 92  PR--YRILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLAR 147
           PR  + +  K+G G FG+V E  + N  +  VAIKI++S +  ++     E+  L+RL R
Sbjct: 4   PREEFTLERKLGSGYFGEVWEGLWKNRVR--VAIKILKSDDLLKQQDFQKEVQALKRL-R 60

Query: 148 HD----IGGTRYRSFPIDLVREL--------------------------GRQLLESVAFM 177
           H     +        P+ ++ EL                            Q+ E +A++
Sbjct: 61  HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYL 120

Query: 178 HELRLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
            E   IH DL   NI LV  + V KV D+  L+R  K+  Y   L     I         
Sbjct: 121 EEQNSIHRDLAARNI-LVGEDLVCKVADFG-LARLIKEDVY---LSSDKKIPY------- 168

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                         + APE      ++   D+WS G +L E+ +
Sbjct: 169 -------------KWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 34/129 (26%)

Query: 156 RSFPIDL--VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R  P+ L  V  + RQLL ++ ++H   +IH D+K EN+L+                   
Sbjct: 253 RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV------------------- 293

Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDL 268
                 N P+   I L DFG+  F     S      +  T    APEV+ G  +    D+
Sbjct: 294 ------NGPED--ICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDI 345

Query: 269 WSVGCILVE 277
           WS G ++ E
Sbjct: 346 WSAGLVIFE 354

Length = 461

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 79/238 (33%)

Query: 159 PIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           P D++ ++   +++++ ++H  L +IH D+KP N+L+     VK+ D+            
Sbjct: 101 PEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDF----------GI 150

Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG----LGWNYPCDLWSVGC 273
              L  S A K ID G               + Y APE I       G++   D+WS+G 
Sbjct: 151 SGYLVDSVA-KTIDAGC--------------KPYMAPERINPELNQKGYDVKSDVWSLGI 195

Query: 274 ILVELCSGEALFQT-HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 332
            ++EL +G   + +     + L  +  V  P P                           
Sbjct: 196 TMIELATGRFPYDSWKTPFQQLKQV--VEEPSP--------------------------- 226

Query: 333 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                        +LP       +  + +  D +   L+ +  ER    E L+HPFF 
Sbjct: 227 -------------QLPA------EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFE 265

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 29/141 (20%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L +V  +H   +IH D+K  NILL S   VK+ D+ F               K  A  
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF--------------SKMYAAT 196

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           + D    TF          T +Y APE+     ++   D++S+G +L EL + +  F   
Sbjct: 197 VSDDVGRTF--------CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG- 247

Query: 289 ENLEHLAMMERVLG----PLP 305
           EN+E +  M + L     PLP
Sbjct: 248 ENMEEV--MHKTLAGRYDPLP 266

Length = 496

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 37/142 (26%)

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H+L +I+ D+K ENILL S                           +  + L DFG + 
Sbjct: 121 LHKLGIIYRDIKLENILLDS---------------------------NGHVVLTDFGLSK 153

Query: 237 FEHQDHSY----VVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
             H+D          T  Y AP+++ G   G +   D WS+G ++ EL +G + F    E
Sbjct: 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE 213

Query: 290 NLEHLAMMERVLG---PLPHHM 308
                 +  R+L    P P  M
Sbjct: 214 KNSQAEISRRILKSEPPYPQEM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 61/217 (28%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G FG+V     N   + VA+K ++      EA + E  ++++L RHD     
Sbjct: 9   KLERKLGAGQFGEVWMGTWNGTTK-VAVKTLKPGTMSPEAFLQEAQIMKKL-RHDKLVQL 66

Query: 155 Y----RSFPIDLVREL--------------GRQLL------------ESVAFMHELRLIH 184
           Y       PI +V E               G++L             E +A++     IH
Sbjct: 67  YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIH 126

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA---IKLIDFGSTTFEHQD 241
            DL   NIL+      K+ D+  L+R  +D  Y     +  A   IK             
Sbjct: 127 RDLAARNILVGENLVCKIADFG-LARLIEDDEY---TAREGAKFPIK------------- 169

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                    + APE      +    D+WS G +L E+
Sbjct: 170 ---------WTAPEAANYGRFTIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 46/226 (20%), Positives = 87/226 (38%), Gaps = 67/226 (29%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI-- 150
           +L ++G+G +G V +         +A+K +R     +K+ +  M E+D+L +     I  
Sbjct: 5   VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIM-ELDILHKAVSPYIVD 63

Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHE-LR 181
                                       GG      P D++R +   +++ + F+ E   
Sbjct: 64  FYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +IH D+KP N+L+     VK+ D+         G+   +L K++                
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGV------SGNLVASLAKTN---------------- 161

Query: 242 HSYVVSTRHYRAPEVILGLG------WNYPCDLWSVGCILVELCSG 281
               +  + Y APE I   G      +    D+WS+G  ++E+  G
Sbjct: 162 ----IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 34/151 (22%)

Query: 155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
            R  P+  ++EL  Q+   +A++     +H DL   N+LLV+    K+ D+  +SR+   
Sbjct: 89  RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFG-MSRALGA 147

Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNYPCDL 268
           GS                           Y  +T   R      APE I    ++   D+
Sbjct: 148 GS--------------------------DYYRATTAGRWPLKWYAPECINYGKFSSKSDV 181

Query: 269 WSVGCILVELCS-GEALFQTHENLEHLAMME 298
           WS G  L E  S G   +   +  E +AM+E
Sbjct: 182 WSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE 212

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 41.2 bits (96), Expect = 7e-04
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 25/133 (18%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q++ ++  +H  +++H DLK  NI L+    +K+ D+ F  + S   S            
Sbjct: 177 QIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS------------ 224

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
            +D  S+            T +Y APE+     ++   D+WS+G IL EL +    F+  
Sbjct: 225 -LDVASS---------FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP 274

Query: 289 ENLEHLAMMERVL 301
              E   +M++VL
Sbjct: 275 SQRE---IMQQVL 284

Length = 478

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 55/236 (23%), Positives = 89/236 (37%), Gaps = 56/236 (23%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L K+G G FG+V E   N     VA+K ++      +  + E  ++++L RH      
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTP-VAVKTLKPGTMDPKDFLAEAQIMKKL-RHPKLIQL 66

Query: 155 Y----RSFPIDLVRELGRQ--LLE------------------------SVAFMHELRLIH 184
           Y       PI +V EL +   LLE                         +A++     IH
Sbjct: 67  YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIH 126

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DL   N+L+      KV D+  L+R  K+  Y         IK                
Sbjct: 127 RDLAARNVLVGENNICKVADFG-LARVIKEDIYEAREGAKFPIK---------------- 169

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                 + APE  L   ++   D+WS G +L E+ + G   +    N E L  +++
Sbjct: 170 ------WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ 219

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 63/284 (22%), Positives = 105/284 (36%), Gaps = 73/284 (25%)

Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDI--- 150
           +GEG FG+V  C +D E     E VA+K ++  +     A +  EI++L+ L   +I   
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 151 --------------------GGTRYRSFP-----IDLVREL--GRQLLESVAFMHELRLI 183
                                G+     P     I+L ++L    Q+ + + ++   + +
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYV 131

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DL   N+L+ S   VK+ D+        D  Y+        +K  D  S  F      
Sbjct: 132 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY-------TVK-DDLDSPVF------ 177

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL---CSGEALFQTHENLEHLAMMERV 300
                  + APE ++   +    D+WS G  L EL   C  E+          + +  ++
Sbjct: 178 -------WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES--------SPMTLFLKM 222

Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVW 342
           +GP    M +    R  +    G RL  P          MR  W
Sbjct: 223 IGPTHGQMTV---TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCW 263

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
           QL  ++A++   R +H D+   N+L+ S + VK+ D+  LSR  +D SY+K
Sbjct: 115 QLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFG-LSRYLEDESYYK 164

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 56/267 (20%), Positives = 95/267 (35%), Gaps = 104/267 (38%)

Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           +++ + RQ+L ++  +H   ++H D+KP+NI+                            
Sbjct: 256 IIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS-------------------------- 289

Query: 222 PKSSAIKLIDFGSTT-----FEHQDHSYVVSTRHYRAPE---------------VILGLG 261
             S + K+ID G+         +    +++  R Y APE               V   L 
Sbjct: 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPR-YAAPEQYIMSTQTPSAPSAPVATALS 348

Query: 262 ---W--NYP--CDLWSVGCILVELC-----SGEALFQTHENLEH----LAMMERVLGPLP 305
              W  N P   D++S G I +++      S   L Q +  L+     L    +++ P  
Sbjct: 349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEP-- 406

Query: 306 HHMVIRADRRAEKYFRRGAR-LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 364
                    RA    RRG   LD   GA         W                     +
Sbjct: 407 ---------RASPDLRRGFEVLDLDGGAG--------W---------------------E 428

Query: 365 LLQGLLRYDPAERLKAREALRHPFFTR 391
           LL+ ++R+   +R+ A+ AL HP+F R
Sbjct: 429 LLKSMMRFKGRQRISAKAALAHPYFDR 455

Length = 566

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 22/138 (15%)

Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 97  ITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA-- 154

Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            + H        + APE +    ++   D+WS G ++ E  S G
Sbjct: 155 -----------------KTHGK--WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYG 195

Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E   M+E 
Sbjct: 196 QKPYKGMKGNEVTQMIES 213

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 56/236 (23%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----I 150
           +++ K+G G FG+V   + N   + VA+K ++      +A + E ++++ L +HD    +
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRL 66

Query: 151 GGTRYRSFPIDLVRE--------------------------LGRQLLESVAFMHELRLIH 184
                +  PI ++ E                             Q+ E +A++     IH
Sbjct: 67  YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 126

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DL+  N+L+  +   K+ D+  L+R  +D  Y         IK                
Sbjct: 127 RDLRAANVLVSESLMCKIADFG-LARVIEDNEYTAREGAKFPIK---------------- 169

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                 + APE I    +    D+WS G +L E+ + G+  +    N + ++ ++R
Sbjct: 170 ------WTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQR 219

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 57/242 (23%), Positives = 93/242 (38%), Gaps = 61/242 (25%)

Query: 92  PR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-----QR 144
           PR   +++ K+G G FG+V   + N   + VAIK ++  +   EA + E +++      R
Sbjct: 4   PRETLKLVKKLGAGQFGEVWMGYYNGHTK-VAIKSLKQGSMSPEAFLAEANLMKQLQHPR 62

Query: 145 LARHDIGGTRYRSFPIDLVRE--------------------------LGRQLLESVAFMH 178
           L R     T+    PI ++ E                          +  Q+ E +AF+ 
Sbjct: 63  LVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
               IH DL+  NIL+      K+ D+  L+R  +D  Y         IK          
Sbjct: 120 RKNYIHRDLRAANILVSETLCCKIADFG-LARLIEDNEYTAREGAKFPIK---------- 168

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM 297
                       + APE I    +    D+WS G +L E+ + G   +    N E +  +
Sbjct: 169 ------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL 216

Query: 298 ER 299
           ER
Sbjct: 217 ER 218

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.98
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.98
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.97
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.97
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.97
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.97
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG1152	772	consensus Signal transduction serine/threonine kin	99.96
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.96
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.96
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.96
KOG3653	534	consensus Transforming growth factor beta/activin	99.95
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.95
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.94
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.93
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.92
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.92
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.9
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.9
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.9
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.89
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.89
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.88
PRK09188	365	serine/threonine protein kinase; Provisional	99.87
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.86
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.8
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.79
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.78
PRK12274	218	serine/threonine protein kinase; Provisional	99.76
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.76
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.76
smart00090	237	RIO RIO-like kinase.	99.68
PRK10345	210	hypothetical protein; Provisional	99.62
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.62
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.62
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.56
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.55
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.55
PRK14879	211	serine/threonine protein kinase; Provisional	99.53
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.51
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.45
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.39
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.38
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.32
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.31
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.2
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.08
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.08
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.06
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.99
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.93
KOG1243	690	consensus Protein kinase [General function predict	98.88
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.82
COG4248	637	Uncharacterized protein with protein kinase and he	98.74
KOG3087	229	consensus Serine/threonine protein kinase [General	98.61
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.56
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.46
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.4
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.23
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.19
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.14
PRK09902	216	hypothetical protein; Provisional	98.04
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.96
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.94
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.83
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.77
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.77
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.72
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.69
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.62
PF01636	239	APH: Phosphotransferase enzyme family This family	97.18
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.92
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.77
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.68
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.46
PRK05231	319	homoserine kinase; Provisional	96.34
KOG2270	520	consensus Serine/threonine protein kinase involved	96.12
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.06
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.98
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.96
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	95.95
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	95.87
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.8
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.8
PLN02876	822	acyl-CoA dehydrogenase	95.57
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.41
PLN02236	344	choline kinase	95.29
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	95.27
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.2
PRK09550	401	mtnK methylthioribose kinase; Reviewed	95.11
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	94.76
PHA03111	444	Ser/Thr kinase; Provisional	93.87
KOG1236	565	consensus Predicted unusual protein kinase [Genera	93.84
PRK11768	325	serine/threonine protein kinase; Provisional	93.83
PRK12396	409	5-methylribose kinase; Reviewed	93.79
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	93.6
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	93.31
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	92.5
PTZ00384	383	choline kinase; Provisional	92.47
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	91.62
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	91.55
COG2334	331	Putative homoserine kinase type II (protein kinase	91.15
PRK10271	188	thiK thiamine kinase; Provisional	90.0
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	89.45
PTZ00296	442	choline kinase; Provisional	89.17
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	86.46
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	85.91
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	85.04
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	85.0

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-59  Score=420.74  Aligned_cols=316  Identities=59%  Similarity=1.005  Sum_probs=273.1

Q ss_pred             CCCCCCCCCCCCCCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH
Q 015532           66 PRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL  145 (405)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l  145 (405)
                      .....+++.+++..|++.+..|+.+.+||++++.||+|+||.|..|.+..++..||||+++...++++..+.|+++|+++
T Consensus        63 ~~~~~~~~~~dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki  142 (415)
T KOG0671|consen   63 ARLESRPGRPDDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKI  142 (415)
T ss_pred             ccccCCCCCCCCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            55667788889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCC----------------------------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCc
Q 015532          146 ARHDIGG----------------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  191 (405)
Q Consensus       146 ~~~~~~~----------------------------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N  191 (405)
                      .+..-.+                                  ..+..|+...++.+++||+.++.|||+.+++|-||||+|
T Consensus       143 ~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPEN  222 (415)
T KOG0671|consen  143 NESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPEN  222 (415)
T ss_pred             HhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChhe
Confidence            7655211                                  124568999999999999999999999999999999999


Q ss_pred             EEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHH
Q 015532          192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV  271 (405)
Q Consensus       192 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  271 (405)
                      ||+.+....+..+.+-.       ..+....++..++++|||.|++..+..++.+.|..|+|||++.+.+++.++||||+
T Consensus       223 ILfvss~~~~~~~~k~~-------~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSi  295 (415)
T KOG0671|consen  223 ILFVSSEYFKTYNPKKK-------VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSI  295 (415)
T ss_pred             EEEeccceEEEeccCCc-------cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceee
Confidence            99988776665544321       12233456778999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          272 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       272 G~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      ||||+|+.+|...|++.++.+++++|++++|++|..++.+..  ..+|+..+ +++|++...... .+..+...+.....
T Consensus       296 GCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~--~~Kyf~~~-rldw~e~~~~~~-~k~v~~~ckpl~~~  371 (415)
T KOG0671|consen  296 GCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR--KEKYFRRG-RLDWPEVSSKGK-SKYVFEPCKPLKKY  371 (415)
T ss_pred             eeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh--hHhhhhcc-cccCcccccccc-chhhhcCCccHHHH
Confidence            999999999999999999999999999999999999987765  67888888 999998777665 44444444444444


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ....+....++.|||++||.+||.+|+|+.|+|.||||+.-
T Consensus       372 ~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  372 MLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             hccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence            44444556679999999999999999999999999999874

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=5.8e-53  Score=407.11  Aligned_cols=291  Identities=40%  Similarity=0.688  Sum_probs=236.5

Q ss_pred             CCCCCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCC---
Q 015532           75 PDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---  151 (405)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~---  151 (405)
                      .++.++.|.+..++.+..+|+|++.||+|+||.|.+|.+..|++.||||+++.......+...|+.||..|+.+...   
T Consensus       169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~  248 (586)
T KOG0667|consen  169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY  248 (586)
T ss_pred             CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence            55677789999999999999999999999999999999999999999999998888888899999999999943221   


Q ss_pred             -------------------------------CCccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccc
Q 015532          152 -------------------------------GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       152 -------------------------------~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~  200 (405)
                                                     ...+..|+...++.++.||+.||.+||+.||||+||||||||+...   
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~---  325 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP---  325 (586)
T ss_pred             eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC---
Confidence                                           1224678999999999999999999999999999999999999764   


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       201 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                                            ....|||+|||+|.+......+.+.++.|+|||++.|.+|+.+.||||||||++||++
T Consensus       326 ----------------------~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~t  383 (586)
T KOG0667|consen  326 ----------------------KRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFT  383 (586)
T ss_pred             ----------------------CcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhc
Confidence                                  3457999999999998887778899999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhc-CCcccCC------CCCCchhhHHHH---HHhccch--
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-GARLDWP------DGATSRDSMRAV---WKLLRLP--  348 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~---~~~~~~~--  348 (405)
                      |.++|.|.+..++++.|.+++|.+|..++...... .+|+.. ......-      .+..........   ......+  
T Consensus       384 G~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~-~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~  462 (586)
T KOG0667|consen  384 GEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA-HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPG  462 (586)
T ss_pred             CccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc-ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCC
Confidence            99999999999999999999999999888777555 555555 3222211      111111111111   1111112  


Q ss_pred             --hhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          349 --NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       349 --~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                        .............+.|||.+||.+||.+|+|+.|+|+||||++
T Consensus       463 ~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  463 SRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             CcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence              1111111134567899999999999999999999999999994

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.7e-53  Score=385.09  Aligned_cols=235  Identities=29%  Similarity=0.472  Sum_probs=190.3

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh--------hhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      .+.+.|.+.+.||+|+||.|-+|..+.||+.||||++++...        ......+|++||++|+||+++...      
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            466789999999999999999999999999999999965321        123357899999999999984321      


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+.+...+.+++||+.||.|||++||+||||||+|||+..+.               
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~---------------  313 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA---------------  313 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC---------------
Confidence                                 24567888899999999999999999999999999999997642               


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCC---CCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                               .+..+||+|||+|+.....  ..++|||+.|.|||++.+.+   +..++||||+||++|.+++|.+||.+.
T Consensus       314 ---------e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~  384 (475)
T KOG0615|consen  314 ---------EDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEE  384 (475)
T ss_pred             ---------cceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccc
Confidence                     4567999999999987533  45689999999999998765   335889999999999999999999876


Q ss_pred             ChHH-HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          289 ENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       289 ~~~~-~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .... ...+|.+.-                        ..+                      ....+..++++.++||.
T Consensus       385 ~~~~sl~eQI~~G~------------------------y~f----------------------~p~~w~~Iseea~dlI~  418 (475)
T KOG0615|consen  385 YTDPSLKEQILKGR------------------------YAF----------------------GPLQWDRISEEALDLIN  418 (475)
T ss_pred             cCCccHHHHHhcCc------------------------ccc----------------------cChhhhhhhHHHHHHHH
Confidence            5433 444443311                        110                      01123456889999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +||.+||++|||++|+|+||||+...
T Consensus       419 ~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  419 WMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HhhEeCcccCcCHHHHhcChhhhccc
Confidence            99999999999999999999999644

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.7e-52  Score=363.95  Aligned_cols=254  Identities=32%  Similarity=0.613  Sum_probs=203.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|+.+.++|+|+||+||+|+++.||+.||||++...+   ...+-+++||.+|++|.|+|++...              
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            46999999999999999999999999999999996433   4567789999999999999984321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   -..++.+.++.++.|++.|+.|||+++||||||||+||||+..|                       
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g-----------------------  138 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG-----------------------  138 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC-----------------------
Confidence                         24578899999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                          .+||||||+|+.....   .+.++.|.+|+|||++.| ..|+..+||||+||++.||++|++.|++.++.+++..|
T Consensus       139 ----vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I  214 (396)
T KOG0593|consen  139 ----VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLI  214 (396)
T ss_pred             ----cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHH
Confidence                5677777777665522   234689999999999998 57999999999999999999999999999999999999


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ...+|.+++.-..-..  ...+| .|.+++-+.  .              +..........+.-+.||+.+||..||++|
T Consensus       215 ~ktLG~L~prhq~iF~--~N~~F-~Gv~lP~~~--~--------------~epLe~k~p~~s~~~ld~~k~cL~~dP~~R  275 (396)
T KOG0593|consen  215 RKTLGNLIPRHQSIFS--SNPFF-HGVRLPEPE--H--------------PEPLERKYPKISNVLLDLLKKCLKMDPDDR  275 (396)
T ss_pred             HHHHcccCHHHHHHhc--cCCce-eeeecCCCC--C--------------ccchhhhcccchHHHHHHHHHHhcCCcccc
Confidence            9999998765432211  01111 111222111  0              111222234556788999999999999999


Q ss_pred             CCHHHHHcCCCCCC
Q 015532          378 LKAREALRHPFFTR  391 (405)
Q Consensus       378 pta~elL~hp~f~~  391 (405)
                      ++.+|+|.||||++
T Consensus       276 ~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  276 LSCEQLLHHPYFDG  289 (396)
T ss_pred             ccHHHHhcChHHHH
Confidence            99999999999954

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-50  Score=387.20  Aligned_cols=226  Identities=31%  Similarity=0.499  Sum_probs=198.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc----hhhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .+|...+.||+|+|+.||.+++..+|+.||+|++.+    ....++...+||+|.+.|.|+||++..             
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            579999999999999999999999999999999976    456678889999999999999995432             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...++|.+++.+++||+.||.|||+++|||||||..|++++.                        
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~------------------------  153 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE------------------------  153 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC------------------------
Confidence                          367899999999999999999999999999999999999864                        


Q ss_pred             CCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                         +.+|||+|||+|....   +...+.||||.|+|||++...+++..+||||+||+||.||+|++||+..+-.+.+..|
T Consensus       154 ---~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I  230 (592)
T KOG0575|consen  154 ---NMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI  230 (592)
T ss_pred             ---cCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH
Confidence               4578889999887765   4456789999999999999999999999999999999999999999998887877777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ....-.+|                                                  ...+.++++||.+||+.||.+|
T Consensus       231 k~~~Y~~P--------------------------------------------------~~ls~~A~dLI~~lL~~~P~~R  260 (592)
T KOG0575|consen  231 KLNEYSMP--------------------------------------------------SHLSAEAKDLIRKLLRPNPSER  260 (592)
T ss_pred             HhcCcccc--------------------------------------------------cccCHHHHHHHHHHhcCCcccC
Confidence            65433333                                                  2457789999999999999999


Q ss_pred             CCHHHHHcCCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDVR  394 (405)
Q Consensus       378 pta~elL~hp~f~~~~~  394 (405)
                      ||+++||.|+||++..-
T Consensus       261 psl~~vL~h~Ff~~g~~  277 (592)
T KOG0575|consen  261 PSLDEVLDHPFFKSGFT  277 (592)
T ss_pred             CCHHHHhcCHhhhCCCc
Confidence            99999999999966543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=3.8e-50  Score=347.56  Aligned_cols=251  Identities=32%  Similarity=0.554  Sum_probs=202.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .+|...++||+|.||+||+|++..+|+.||||.++..+   ...-..++||+.|+.+.|+++++..              
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            47899999999999999999999999999999997543   2356788999999999999984421              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...++...++.++.++++||+|||++.|+||||||.|+||+++|.                      
T Consensus        82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~----------------------  139 (318)
T KOG0659|consen   82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQ----------------------  139 (318)
T ss_pred             eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCc----------------------
Confidence                         234677889999999999999999999999999999999987774                      


Q ss_pred             CCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           +||+|||+|+......   ...+-|.+|+|||++.|. .|+..+||||.|||+.||+-|.+.|.|.++.+++..|
T Consensus       140 -----lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~I  214 (318)
T KOG0659|consen  140 -----LKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKI  214 (318)
T ss_pred             -----EEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHH
Confidence                 5666666665544322   223789999999999986 5999999999999999999999999999999999999


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhh-cccCchHHHHHHHHHccccCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ-HVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      .+.+|++-++.                   ||+-..-.+..    .....+..... .....+.++.||+.+||.+||.+
T Consensus       215 f~~LGTP~~~~-------------------WP~~~~lpdY~----~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~  271 (318)
T KOG0659|consen  215 FRALGTPTPDQ-------------------WPEMTSLPDYV----KIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKK  271 (318)
T ss_pred             HHHcCCCCccc-------------------CccccccccHH----HHhcCCCCccccccccccHHHHHHHHhhhccCchh
Confidence            99999876543                   44322222221    11122222222 44566778899999999999999


Q ss_pred             CCCHHHHHcCCCCCCC
Q 015532          377 RLKAREALRHPFFTRD  392 (405)
Q Consensus       377 Rpta~elL~hp~f~~~  392 (405)
                      |+||.|+|+|+||++.
T Consensus       272 Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  272 RITASQALKHPYFKSL  287 (318)
T ss_pred             cccHHHHhcchhhhcC
Confidence            9999999999999974

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-50  Score=375.46  Aligned_cols=259  Identities=32%  Similarity=0.533  Sum_probs=207.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHH--HHHHHHHHHHHh-hcCCCCC-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA--AMIEIDVLQRLA-RHDIGGT-------------  153 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~--~~~E~~il~~l~-~~~~~~~-------------  153 (405)
                      +.+||.++++||.|+||.||+|+.+.+++.||||.+++.-..-++  -++|+..|++|+ |+|++..             
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            457899999999999999999999999999999999764332232  458999999999 8887431             


Q ss_pred             ---------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          154 ---------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       154 ---------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                     +...|++..++.|+.||++||+|+|.+|+.|||+||+||||..                      
T Consensus        88 VfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~----------------------  145 (538)
T KOG0661|consen   88 VFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG----------------------  145 (538)
T ss_pred             eHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc----------------------
Confidence                           1467899999999999999999999999999999999999963                      


Q ss_pred             cCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                           +..+||+|||+|+......  +.++.|++|+|||++... -|+.++||||+|||++|+.+-++.|.|.++.+++.
T Consensus       146 -----~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~  220 (538)
T KOG0661|consen  146 -----NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIY  220 (538)
T ss_pred             -----cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHH
Confidence                 3468999999998766544  447899999999998765 58999999999999999999999999999999999


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      +|++++|.+-...+.....     ....-+..+|.-.               +..........+.++.+||.+||.|||+
T Consensus       221 KIc~VLGtP~~~~~~eg~~-----La~~mnf~~P~~~---------------~~~l~~L~p~~s~~~~~li~~ll~WDP~  280 (538)
T KOG0661|consen  221 KICEVLGTPDKDSWPEGYN-----LASAMNFRFPQVK---------------PSPLKDLLPNASSEAASLIERLLAWDPD  280 (538)
T ss_pred             HHHHHhCCCccccchhHHH-----HHHHhccCCCcCC---------------CCChHHhCcccCHHHHHHHHHHhcCCCc
Confidence            9999999876543322211     1111122222210               1112223344688999999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~~  395 (405)
                      +||||.|+|+||||+.....
T Consensus       281 kRpTA~~al~~pffq~~~~~  300 (538)
T KOG0661|consen  281 KRPTASQALQHPFFQVGRAS  300 (538)
T ss_pred             cCccHHHHhcCccccccccc
Confidence            99999999999999976543

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-49  Score=356.87  Aligned_cols=258  Identities=28%  Similarity=0.502  Sum_probs=210.0

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc---hhhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+..+|..++.||+|+||.|+.|.++.+|+.||||.+..   .....++..+|+.+|+.+.|+|++...           
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            345678888999999999999999999999999999862   234557788999999999999984321           


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...++++.+..++.||+.||.|+|+.+|+||||||.|+|++.                  
T Consensus        99 ~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~------------------  160 (359)
T KOG0660|consen   99 NDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA------------------  160 (359)
T ss_pred             ceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc------------------
Confidence                                234888999999999999999999999999999999999865                  


Q ss_pred             CCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                               ++.+||||||+|+....     ..+..+.|.+|+|||++.. ..|+.++||||+|||+.||++|++.|.|.
T Consensus       161 ---------~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~  231 (359)
T KOG0660|consen  161 ---------DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK  231 (359)
T ss_pred             ---------CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence                     44678888888877632     2345788999999999875 47999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhh-HhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRAD-RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      +..+++..|...+|.++++.+.... .....|.......                    .+..........++.++|||.
T Consensus       232 d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~--------------------p~~~f~~~fp~a~p~AidLle  291 (359)
T KOG0660|consen  232 DYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQI--------------------PKQPFSSIFPNANPLAIDLLE  291 (359)
T ss_pred             chHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCC--------------------CCCCHHHHcCCCCHHHHHHHH
Confidence            9999999999999999888776543 2233333222100                    011112334567889999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +||.+||.+|+|++|+|+||||....
T Consensus       292 kmL~fdP~kRita~eAL~hPYl~~~h  317 (359)
T KOG0660|consen  292 KMLVFDPKKRITAEEALAHPYLAPYH  317 (359)
T ss_pred             HHhccCccccCCHHHHhcChhhhhhc
Confidence            99999999999999999999998753

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-49  Score=356.40  Aligned_cols=229  Identities=24%  Similarity=0.443  Sum_probs=190.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEec--chhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~--~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ...+.++.||+|+.|+||+|+|+.|++.+|+|++.  .....+.+..+|++|++..+++++++..               
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            45778899999999999999999999999999993  3456678899999999999999885422               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                   .+.++|.....++.+|++||.|||+ ++||||||||+|||+++.|                      
T Consensus       159 YMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG----------------------  216 (364)
T KOG0581|consen  159 YMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG----------------------  216 (364)
T ss_pred             hcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC----------------------
Confidence                         2458899999999999999999995 9999999999999998766                      


Q ss_pred             CCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH--ENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~--~~~~~~~~i  297 (405)
                           .|||||||.+...... ..+++||..|||||.+.+..|+.++||||||++++|+++|+.||...  .....+..+
T Consensus       217 -----eVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll  291 (364)
T KOG0581|consen  217 -----EVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELL  291 (364)
T ss_pred             -----CEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHH
Confidence                 5677788877654433 35689999999999999999999999999999999999999999774  233444455


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhccc-CchHHHHHHHHHccccCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD-HSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L~~dP~~  376 (405)
                      ..++..+|+.+                                              +. .+++++++||..||++||.+
T Consensus       292 ~~Iv~~ppP~l----------------------------------------------P~~~fS~ef~~FV~~CL~Kdp~~  325 (364)
T KOG0581|consen  292 CAIVDEPPPRL----------------------------------------------PEGEFSPEFRSFVSCCLRKDPSE  325 (364)
T ss_pred             HHHhcCCCCCC----------------------------------------------CcccCCHHHHHHHHHHhcCCccc
Confidence            55444333211                                              12 36889999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDV  393 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~  393 (405)
                      |+|+.|+++|||+++..
T Consensus       326 R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  326 RPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             CCCHHHHhcCHHHhhcc
Confidence            99999999999999754

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-49  Score=360.06  Aligned_cols=228  Identities=29%  Similarity=0.468  Sum_probs=190.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.|+++++||+|+||+|++++.+.+++.||+|++++..    +.......|.+||.++.||.+++..             
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl  104 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL  104 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence            56999999999999999999999999999999997643    2345677899999999999885432             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    .+.|+|+.++.++.+|+.||.|||++|||||||||+|||++..|++                    
T Consensus       105 d~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi--------------------  164 (357)
T KOG0598|consen  105 DYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHI--------------------  164 (357)
T ss_pred             eccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcE--------------------
Confidence                          3578999999999999999999999999999999999999887765                    


Q ss_pred             CCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                             +|+|||+++...   ....+++||+.|||||++.+.+|+..+|+|||||++|+|++|.+||.+.+.......|
T Consensus       165 -------~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I  237 (357)
T KOG0598|consen  165 -------KLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI  237 (357)
T ss_pred             -------EEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH
Confidence                   555555554221   2334579999999999999999999999999999999999999999998887777766


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+.-...++                                                 .-.+.++++||+++|+.||++|
T Consensus       238 ~~~k~~~~p-------------------------------------------------~~ls~~ardll~~LL~rdp~~R  268 (357)
T KOG0598|consen  238 LKGKLPLPP-------------------------------------------------GYLSEEARDLLKKLLKRDPRQR  268 (357)
T ss_pred             hcCcCCCCC-------------------------------------------------ccCCHHHHHHHHHHhccCHHHh
Confidence            553211111                                                 1246789999999999999999


Q ss_pred             C----CHHHHHcCCCCCCCCCC
Q 015532          378 L----KAREALRHPFFTRDVRR  395 (405)
Q Consensus       378 p----ta~elL~hp~f~~~~~~  395 (405)
                      .    .++++-+||||..-.+.
T Consensus       269 Lg~~~d~~~ik~HpfF~~inW~  290 (357)
T KOG0598|consen  269 LGGPGDAEEIKRHPFFKGINWE  290 (357)
T ss_pred             cCCCCChHHhhcCcccccCCHH
Confidence            6    79999999999986544

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-49  Score=369.48  Aligned_cols=258  Identities=31%  Similarity=0.472  Sum_probs=208.4

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      +..-.+.|+.+++||+|.||.||+|++..+|+.||+|.++...   .......+||.||++|.|+||+...         
T Consensus       112 ~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~  191 (560)
T KOG0600|consen  112 GPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG  191 (560)
T ss_pred             cccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence            3444567999999999999999999999999999999997543   3445678999999999999984321         


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          .-.|++.+++.|++||+.||+|||++||+|||||.+||||+.+|                
T Consensus       192 siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G----------------  255 (560)
T KOG0600|consen  192 SIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG----------------  255 (560)
T ss_pred             eEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC----------------
Confidence                                23689999999999999999999999999999999999998766                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                 .+||+|||+|++....    .+..+-|.+|+|||++.|. .|+.++|+||+||||.||++|++.|.+.+
T Consensus       256 -----------~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t  324 (560)
T KOG0600|consen  256 -----------VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT  324 (560)
T ss_pred             -----------CEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence                       5677777777754432    2346789999999999987 59999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      +.+++..|.+++|.+.+..+...            ++.+......         .........+.....+....+|+..|
T Consensus       325 EveQl~kIfklcGSP~e~~W~~~------------kLP~~~~~kp---------~~~y~r~l~E~~~~~~~~~l~Ll~~l  383 (560)
T KOG0600|consen  325 EVEQLHKIFKLCGSPTEDYWPVS------------KLPHATIFKP---------QQPYKRRLRETFKDFPASALDLLEKL  383 (560)
T ss_pred             HHHHHHHHHHHhCCCChhccccc------------cCCcccccCC---------CCcccchHHHHhccCCHHHHHHHHHH
Confidence            99999999999999887664311            1111111100         01112223333556688899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      |..||++|.||.++|+|+||+..
T Consensus       384 L~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  384 LSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             hccCccccccHHHHhcCcccccC
Confidence            99999999999999999999544

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.3e-48  Score=347.85  Aligned_cols=255  Identities=27%  Similarity=0.453  Sum_probs=202.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCC---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGT---------------  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~---------------  153 (405)
                      +.|+.+++|++|+||.||+|+++.|++.||+|.++-..   ...-..++||++|.++.|+||+..               
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            56999999999999999999999999999999996432   334567899999999999998432               


Q ss_pred             --------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          154 --------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       154 --------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                    ....|...+++.++.|++.||+|||.+.|+|||||++|+|+...|                     
T Consensus       156 Me~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G---------------------  214 (419)
T KOG0663|consen  156 MEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG---------------------  214 (419)
T ss_pred             HHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC---------------------
Confidence                          135788999999999999999999999999999999999997766                     


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                            .+||+|||+|+.....   .+..+-|.+|+|||++.|. .|+.++|+||+|||+.||+++++.|.|....+++.
T Consensus       215 ------~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~  288 (419)
T KOG0663|consen  215 ------ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLD  288 (419)
T ss_pred             ------cEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHH
Confidence                  5677888888766655   3456889999999999987 49999999999999999999999999999999999


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC--chHHHHHHHHHccccC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH--SAGDLIDLLQGLLRYD  373 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ll~~~L~~d  373 (405)
                      +|.+.+|.+.+..+.....                   .+ ....+.......+.....+..  .++...+|+..+|.+|
T Consensus       289 ~If~llGtPte~iwpg~~~-------------------lp-~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~d  348 (419)
T KOG0663|consen  289 KIFKLLGTPSEAIWPGYSE-------------------LP-AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYD  348 (419)
T ss_pred             HHHHHhCCCccccCCCccc-------------------cc-hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccC
Confidence            9999999887654322110                   00 000000000000111111111  4578899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~  393 (405)
                      |.+|.||+|+|+|+||....
T Consensus       349 P~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  349 PGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             ccccccHHHhhcccccccCC
Confidence            99999999999999999843

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1e-47  Score=361.59  Aligned_cols=242  Identities=25%  Similarity=0.382  Sum_probs=197.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHH-hhcCCCC--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRL-ARHDIGG--------------  152 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l-~~~~~~~--------------  152 (405)
                      ..|.+.+.||.|+|++|++|+++.+++.||||++.+.-.    ......+|-++|.+| .|+.++.              
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            569999999999999999999999999999999965322    234466789999999 5555421              


Q ss_pred             -------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          153 -------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       153 -------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                   ..++.|++..++.++.||+.||+|||++|||||||||+|||++.+|++||+|||.++.+........
T Consensus       153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~  232 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE  232 (604)
T ss_pred             EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc
Confidence                         1157899999999999999999999999999999999999999999998888887765543321100


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                                 .+-..........+++||..|.+||++.....+..+|||+||||+|+|+.|.+||.+.++.-.+..|..
T Consensus       233 -----------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~  301 (604)
T KOG0592|consen  233 -----------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA  301 (604)
T ss_pred             -----------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH
Confidence                       000011111223568999999999999999999999999999999999999999999999998888887


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      +.-.+|+                                                  ..++.++|||.++|..||.+|+|
T Consensus       302 l~y~fp~--------------------------------------------------~fp~~a~dLv~KLLv~dp~~Rlt  331 (604)
T KOG0592|consen  302 LDYEFPE--------------------------------------------------GFPEDARDLIKKLLVRDPSDRLT  331 (604)
T ss_pred             hcccCCC--------------------------------------------------CCCHHHHHHHHHHHccCcccccc
Confidence            6554443                                                  34668899999999999999999


Q ss_pred             HHHHHcCCCCCCCCC
Q 015532          380 AREALRHPFFTRDVR  394 (405)
Q Consensus       380 a~elL~hp~f~~~~~  394 (405)
                      ++||.+||||.+-.+
T Consensus       332 ~~qIk~HpFF~~Vdw  346 (604)
T KOG0592|consen  332 SQQIKAHPFFEGVDW  346 (604)
T ss_pred             HHHHhhCcccccCCh
Confidence            999999999987543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-46  Score=345.47  Aligned_cols=316  Identities=31%  Similarity=0.543  Sum_probs=238.4

Q ss_pred             CCCCCCCCCCCceEeeCCccC-CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcC
Q 015532           71 PPWRPDDKDGHYVFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD  149 (405)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~-~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~  149 (405)
                      ........+|++++.+|+.|. +||.+.++||.|.|++||+|.|..+.+.||+|+.+....+.+..+.||.+|+++...+
T Consensus        56 E~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D  135 (590)
T KOG1290|consen   56 EDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD  135 (590)
T ss_pred             cChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence            334456788999999999999 9999999999999999999999999999999999999999999999999999997755


Q ss_pred             --CC--------------------------------------CCccccCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCC
Q 015532          150 --IG--------------------------------------GTRYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLK  188 (405)
Q Consensus       150 --~~--------------------------------------~~~~~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlk  188 (405)
                        ..                                      ...|+.++...++.|++|||.||+||| ++||||-|||
T Consensus       136 p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlK  215 (590)
T KOG1290|consen  136 PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLK  215 (590)
T ss_pred             CCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCC
Confidence              10                                      012677899999999999999999999 5799999999


Q ss_pred             CCcEEEecccc-----------c------------cc--------------CCcc-------------------------
Q 015532          189 PENILLVSAEY-----------V------------KV--------------PDYK-------------------------  206 (405)
Q Consensus       189 p~NIli~~~~~-----------~------------k~--------------~df~-------------------------  206 (405)
                      |+|||+.....           .            +-              .++-                         
T Consensus       216 PENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~  295 (590)
T KOG1290|consen  216 PENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIE  295 (590)
T ss_pred             cceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccc
Confidence            99999975410           0            00              0000                         


Q ss_pred             -------------------ccccCCCC----------CCccc--------------------------------------
Q 015532          207 -------------------FLSRSSKD----------GSYFK--------------------------------------  219 (405)
Q Consensus       207 -------------------~~~~~~~~----------~~~~~--------------------------------------  219 (405)
                                         .+.....+          ....+                                      
T Consensus       296 ~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~  375 (590)
T KOG1290|consen  296 EEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIA  375 (590)
T ss_pred             ccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccc
Confidence                               00000000          00000                                      


Q ss_pred             ----------CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-
Q 015532          220 ----------NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-  288 (405)
Q Consensus       220 ----------~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~-  288 (405)
                                .......+||+|||-|.+....-+.-..|..|+|||++.|.+|+..+||||++|++|||+||..+|... 
T Consensus       376 ~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhs  455 (590)
T KOG1290|consen  376 SNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHS  455 (590)
T ss_pred             cccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCC
Confidence                      001123589999999998877777778899999999999999999999999999999999999999642 


Q ss_pred             -----ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          289 -----ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       289 -----~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                           .+.+++++|.+++|.+|..+...... .+.||.+.+.+.-..........+-+.....       .....+.++.
T Consensus       456 G~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~-SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~-------~s~e~A~~fs  527 (590)
T KOG1290|consen  456 GENYSRDEDHIALIMELLGKIPRKIALGGKY-SRDFFNRRGELRHIRRLKPWPLYEVLIEKYE-------WSEEDAQQFS  527 (590)
T ss_pred             CCCCCccHHHHHHHHHHHhhccHHHHhcCcc-hHhhhccccceecccccCCCcHHHHHHHHhC-------CCHHHHHHHH
Confidence                 46789999999999999988766543 4455555444432221111111111111111       2234467899


Q ss_pred             HHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          364 DLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      |||.-||+++|++|+||.++|+|||+.....
T Consensus       528 dFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  528 DFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             HHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence            9999999999999999999999999996544

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1e-45  Score=368.51  Aligned_cols=294  Identities=38%  Similarity=0.665  Sum_probs=215.0

Q ss_pred             CCceEeeCCcc---CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCC---
Q 015532           80 GHYVFAIGENL---TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT---  153 (405)
Q Consensus        80 ~~~~~~~~~~~---~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~---  153 (405)
                      +.+....++.+   .++|++.++||+|+||+||+|.+..+++.||||+++...........|+++++.+.+.+....   
T Consensus       114 ~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i  193 (467)
T PTZ00284        114 GHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPL  193 (467)
T ss_pred             CceeEecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcce
Confidence            34555556544   578999999999999999999999999999999997655555566779999999877653110   


Q ss_pred             ------------------------------ccccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEeccccccc
Q 015532          154 ------------------------------RYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       154 ------------------------------~~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~  202 (405)
                                                    ....+++..++.++.||+.||+|||+ .|||||||||+|||++..+... 
T Consensus       194 ~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~-  272 (467)
T PTZ00284        194 MKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVV-  272 (467)
T ss_pred             eeeEEEEEcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccc-
Confidence                                          01347888999999999999999998 5999999999999998765321 


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCC
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~  282 (405)
                       ++....         ........+||+|||.+..........+||+.|+|||++.+..|+.++|||||||++|||++|+
T Consensus       273 -~~~~~~---------~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~  342 (467)
T PTZ00284        273 -DPVTNR---------ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK  342 (467)
T ss_pred             -cccccc---------ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCC
Confidence             111100         0012334699999998876555555678999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHh-hHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      +||.+.+..+.+..+.+.+|.+|..+....... ...++.....+..   .................    .  ...++.
T Consensus       343 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~--~~~~~~  413 (467)
T PTZ00284        343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRP---CTDPKHLARIARARPVR----E--VIRDDL  413 (467)
T ss_pred             CCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccc---cCCHHHHHhhhcccchh----h--hhchHH
Confidence            999999999999999999999998876543211 1222222211110   00111111100000000    0  012457


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +.|||.+||++||++||||+|+|+||||++..
T Consensus       414 ~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        414 LCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             HHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence            88999999999999999999999999999843

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.3e-47  Score=345.01  Aligned_cols=251  Identities=30%  Similarity=0.542  Sum_probs=201.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      =.|.-.+++|+|+||.||+|....+++.||||.+-.....   ..+|+++|+.+.|+|++...                 
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            3589999999999999999999999999999988554443   34699999999999985422                 


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...++.-.++-+..||++||.|||+.||+||||||+|||++.                    
T Consensus       101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~--------------------  160 (364)
T KOG0658|consen  101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP--------------------  160 (364)
T ss_pred             HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC--------------------
Confidence                              134455567778999999999999999999999999999975                    


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                            .++.+||||||+|+......  .+...|+.|+|||++.|. .|+.+.||||.||++.||+-|++.|.|.+..++
T Consensus       161 ------~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ  234 (364)
T KOG0658|consen  161 ------DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ  234 (364)
T ss_pred             ------CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH
Confidence                  45679999999998765433  446789999999999986 599999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..|.+++|.+..+.+...+.....       ..+|.      .....|        ..-.....++++.+|+.++|+++
T Consensus       235 L~eIik~lG~Pt~e~I~~mn~~y~~-------~~~p~------ik~~~~--------~~~~~~~~~~d~~dll~~~L~Y~  293 (364)
T KOG0658|consen  235 LVEIIKVLGTPTREDIKSMNPNYTE-------FKFPQ------IKAHPW--------HKVFFKRLPPDALDLLSKLLQYS  293 (364)
T ss_pred             HHHHHHHhCCCCHHHHhhcCccccc-------ccCcc------cccccc--------eeecccCCCHHHHHHHHHHhccC
Confidence            9999999999988766544322110       00110      000000        00122455789999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRD  392 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~  392 (405)
                      |.+|.++.|+|+||||..-
T Consensus       294 P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  294 PSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             hhhcCCHHHHhcchhhHHh
Confidence            9999999999999999864

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-49  Score=335.62  Aligned_cols=235  Identities=26%  Similarity=0.405  Sum_probs=197.6

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.+.|++.+.||+|.|+.||++.+..+|+.+|+|+++..   ....+...+|+.|.+.|.||+|+...           
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            4568899999999999999999999999999999998532   23457788999999999999985422           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...++|..+-.+++||+.||.|||.+||||||+||+|+|+-+..                    
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~--------------------  147 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKA--------------------  147 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeecc--------------------
Confidence                            12356777888999999999999999999999999999997642                    


Q ss_pred             cCCCCCCCceeccCCCCccccCCcc--ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHS--YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                          +...+||+|||+|........  ..+|||.|||||++...+|+..+|||+.||+||-|+.|.+||.+.+.....++
T Consensus       148 ----~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~  223 (355)
T KOG0033|consen  148 ----KGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQ  223 (355)
T ss_pred             ----CCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHH
Confidence                455689999999987664332  26899999999999999999999999999999999999999999888787777


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      |.+.--.+|.                                              ..++.+++++++|+++||..||.+
T Consensus       224 I~~g~yd~~~----------------------------------------------~~w~~is~~Ak~LvrrML~~dP~k  257 (355)
T KOG0033|consen  224 IKAGAYDYPS----------------------------------------------PEWDTVTPEAKSLIRRMLTVNPKK  257 (355)
T ss_pred             HhccccCCCC----------------------------------------------cccCcCCHHHHHHHHHHhccChhh
Confidence            7653222211                                              234567889999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDV  393 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~  393 (405)
                      |+||.|+|+|||+.+..
T Consensus       258 RIta~EAL~HpWi~~r~  274 (355)
T KOG0033|consen  258 RITADEALKHPWICNRE  274 (355)
T ss_pred             hccHHHHhCCchhcchH
Confidence            99999999999998754

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-47  Score=335.44  Aligned_cols=226  Identities=25%  Similarity=0.382  Sum_probs=195.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.|++++.||.|+||.|.+++++.+|..||+|++++..    +..+...+|..+|+.+.||.+....             
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            56999999999999999999999999999999997643    3446677899999999998763211             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    .+.|++..++.++.||+.||+|||+++|++|||||+|||++.+|                      
T Consensus       124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G----------------------  181 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG----------------------  181 (355)
T ss_pred             eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC----------------------
Confidence                          35799999999999999999999999999999999999998766                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||+|+......-+.||||.|+|||++...+|+.++|+|||||++|||+.|.+||...+.......|...
T Consensus       182 -----~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~  256 (355)
T KOG0616|consen  182 -----HIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG  256 (355)
T ss_pred             -----cEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC
Confidence                 467778888887777777789999999999999999999999999999999999999999999988888777664


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC--
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL--  378 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp--  378 (405)
                      --.+|.                                                  -.+.+++|||+++|++|-.+|.  
T Consensus       257 ~v~fP~--------------------------------------------------~fs~~~kdLl~~LL~vD~t~R~gn  286 (355)
T KOG0616|consen  257 KVKFPS--------------------------------------------------YFSSDAKDLLKKLLQVDLTKRFGN  286 (355)
T ss_pred             cccCCc--------------------------------------------------ccCHHHHHHHHHHHhhhhHhhhcC
Confidence            333332                                                  3467899999999999999994  


Q ss_pred             ---CHHHHHcCCCCCCCCC
Q 015532          379 ---KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 ---ta~elL~hp~f~~~~~  394 (405)
                         ...+|.+||||+...+
T Consensus       287 lknG~~dIk~H~wF~~v~W  305 (355)
T KOG0616|consen  287 LKNGVEDIKNHPWFKGVDW  305 (355)
T ss_pred             cCCCccccccCcccccccH
Confidence               5789999999997654

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.3e-47  Score=342.59  Aligned_cols=258  Identities=33%  Similarity=0.549  Sum_probs=201.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---hhHHHHHHHHHHHHHhhcC-CCC---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD-IGG---------------  152 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~il~~l~~~~-~~~---------------  152 (405)
                      ..|+.+++||+|+||+||+|+.+.+|+.||+|+++...+   ......+|+.+|+.|+|.+ ++.               
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            458888999999999999999999999999999975433   5567899999999999999 421               


Q ss_pred             Cc------------------c---ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          153 TR------------------Y---RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       153 ~~------------------~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                      ..                  .   ..++...++.+++||+.||+|||++||+||||||+||||+..|             
T Consensus        91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G-------------  157 (323)
T KOG0594|consen   91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG-------------  157 (323)
T ss_pred             eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC-------------
Confidence            00                  1   2456678999999999999999999999999999999998766             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                    .+||+|||+|+...-   ..+..++|.+|+|||++.|. .|+..+||||+|||++||+++++.|.+
T Consensus       158 --------------~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG  223 (323)
T KOG0594|consen  158 --------------VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPG  223 (323)
T ss_pred             --------------cEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCC
Confidence                          456666666654331   12345889999999999987 699999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .++.+++..|.+.+|.+.+..                   ||.......... .+.....+..........+.+..+++.
T Consensus       224 ~se~~ql~~If~~lGtP~e~~-------------------Wp~v~~~~~~k~-~f~~~~~~~~l~~~~~~~~~~~~dll~  283 (323)
T KOG0594|consen  224 DSEIDQLFRIFRLLGTPNEKD-------------------WPGVSSLPDYKA-PFPKWPGPKDLSSILPKLDPDGIELLS  283 (323)
T ss_pred             CcHHHHHHHHHHHcCCCCccC-------------------CCCccccccccc-cCcCCCCccchHHhccccCccHHHHHH
Confidence            999999999999999876533                   332221111100 111111122222333344568899999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      +||+++|.+|.||+.+|.||||+......
T Consensus       284 ~~L~y~p~~R~Sa~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  284 KLLQYDPAKRISAKGALTHPYFSELPEKS  312 (323)
T ss_pred             HHhccCcccCcCHHHHhcChhhcccccch
Confidence            99999999999999999999999875543

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=3.7e-46  Score=351.18  Aligned_cols=257  Identities=27%  Similarity=0.398  Sum_probs=199.2

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+.|++++.||+|+||.||+|+.+.||+.||+|++++...    ..+.+..|-.||.....+.++...            
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            3679999999999999999999999999999999987653    335566788899887777664322            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     .+.|++++++.++.+++.|++.||+.|+|||||||+|+||+..|++||+||||+.-.........
T Consensus       220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~  299 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES  299 (550)
T ss_pred             EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhh
Confidence                           35789999999999999999999999999999999999999999999999999853332111110


Q ss_pred             ------CCCCCCCceeccCCCC--cccc------------CC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHH
Q 015532          220 ------NLPKSSAIKLIDFGST--TFEH------------QD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       220 ------~~~~~~~~kl~Dfg~a--~~~~------------~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  276 (405)
                            .-......+..||...  ....            ..   ....+|||.|||||++.+.+|+..+|+||||||+|
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Imy  379 (550)
T KOG0605|consen  300 YRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMY  379 (550)
T ss_pred             hcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHH
Confidence                  0001112344555531  1100            00   11268999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhccc
Q 015532          277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  356 (405)
Q Consensus       277 ~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (405)
                      |||.|.+||.+.+..+....|...--.                      +.+|.                        ..
T Consensus       380 EmLvGyPPF~s~tp~~T~rkI~nwr~~----------------------l~fP~------------------------~~  413 (550)
T KOG0605|consen  380 EMLVGYPPFCSETPQETYRKIVNWRET----------------------LKFPE------------------------EV  413 (550)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhhh----------------------ccCCC------------------------cC
Confidence            999999999999998888777543110                      11111                        12


Q ss_pred             CchHHHHHHHHHccccCCCCCC---CHHHHHcCCCCCCCCC
Q 015532          357 HSAGDLIDLLQGLLRYDPAERL---KAREALRHPFFTRDVR  394 (405)
Q Consensus       357 ~~~~~l~~ll~~~L~~dP~~Rp---ta~elL~hp~f~~~~~  394 (405)
                      ..++++.|||.+||. ||++|.   +++||.+||||++-.+
T Consensus       414 ~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W  453 (550)
T KOG0605|consen  414 DLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW  453 (550)
T ss_pred             cccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence            346789999999999 999998   4999999999998654

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-45  Score=341.51  Aligned_cols=240  Identities=27%  Similarity=0.391  Sum_probs=186.6

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---------------hhhHHHHHHHHHHHHHhhcCCCCCc
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------------KYREAAMIEIDVLQRLARHDIGGTR  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------------~~~~~~~~E~~il~~l~~~~~~~~~  154 (405)
                      ..++|++.+.||+|.||.|.+|++..+++.||||++.+..               ...+...+||.||+++.|+|++...
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            4478999999999999999999999999999999995422               1235788999999999999984321


Q ss_pred             -----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCc
Q 015532          155 -----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       155 -----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df  205 (405)
                                                   ...+++.+++.|+++++.||+|||.+|||||||||+|+|++++|.+||+||
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDF  254 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDF  254 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecc
Confidence                                         123789999999999999999999999999999999999988776655555


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCC----CCCchhHHHHHHHHHHHHhC
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~~lltg  281 (405)
                      |.+-......               |-    .........+|||.|+|||.+.+..    .+.+.||||+||+||+|+.|
T Consensus       255 GVs~~~~~~~---------------~~----~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG  315 (576)
T KOG0585|consen  255 GVSNEFPQGS---------------DE----GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFG  315 (576)
T ss_pred             ceeeecccCC---------------cc----ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhc
Confidence            5432111000               00    0000112258999999999998732    34889999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      +.||-+....+....|....-.+|                        +                        ..++.+.
T Consensus       316 ~~PF~~~~~~~l~~KIvn~pL~fP------------------------~------------------------~pe~~e~  347 (576)
T KOG0585|consen  316 QLPFFDDFELELFDKIVNDPLEFP------------------------E------------------------NPEINED  347 (576)
T ss_pred             cCCcccchHHHHHHHHhcCcccCC------------------------C------------------------cccccHH
Confidence            999998887777777655322222                        1                        1234668


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ++|||.+||.+||++|++..+|..|||..+....+
T Consensus       348 ~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~  382 (576)
T KOG0585|consen  348 LKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP  382 (576)
T ss_pred             HHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence            99999999999999999999999999999875443

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.1e-46  Score=358.53  Aligned_cols=230  Identities=28%  Similarity=0.478  Sum_probs=196.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +-|++.+.||.|+-|.|.+|++..||+.+|||++.+.    ........+||.||+.+.|||+....             
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            4599999999999999999999999999999999654    22345567899999999999983321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    .+.+++.++.++++||+.|+.|||..+|+||||||+|+|++..+                      
T Consensus        92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~----------------------  149 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN----------------------  149 (786)
T ss_pred             EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc----------------------
Confidence                          36789999999999999999999999999999999999987543                      


Q ss_pred             CCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           .+||+|||+|.....+.  .+.||++.|.|||++.|.+|+ .++||||+|||||.||||..||.+++-...+.++
T Consensus       150 -----nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV  224 (786)
T KOG0588|consen  150 -----NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKV  224 (786)
T ss_pred             -----CEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence                 48888888887655443  457999999999999999986 8899999999999999999999988777777777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ++....+|                                                  ..++.++++||++||.+||++|
T Consensus       225 ~~G~f~MP--------------------------------------------------s~Is~eaQdLLr~ml~VDp~~R  254 (786)
T KOG0588|consen  225 QRGVFEMP--------------------------------------------------SNISSEAQDLLRRMLDVDPSTR  254 (786)
T ss_pred             HcCcccCC--------------------------------------------------CcCCHHHHHHHHHHhccCcccc
Confidence            66444333                                                  4568899999999999999999


Q ss_pred             CCHHHHHcCCCCCCCCCCCcc
Q 015532          378 LKAREALRHPFFTRDVRRPTL  398 (405)
Q Consensus       378 pta~elL~hp~f~~~~~~~~~  398 (405)
                      +|.+||++|||+++...-+..
T Consensus       255 iT~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  255 ITTEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             ccHHHHhhCchhhcCCCCChh
Confidence            999999999999998765544

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-45  Score=336.59  Aligned_cols=244  Identities=24%  Similarity=0.358  Sum_probs=193.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.|++.++||.|.-++||+|++..+++.||||++...+  ...+...+|+..|..++|||+....               
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence            46999999999999999999999999999999996433  3356788999999999999995432               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...++|..+..+++++++||.|||++|.||||||+.||||+++|.+||+|||...           
T Consensus       106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa-----------  174 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSA-----------  174 (516)
T ss_pred             hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeee-----------
Confidence                          2357899999999999999999999999999999999999999999888888642           


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                             .|.|-|...... - .+++||++|||||++..  .+|+.|+||||||++.+||++|..||........+.+  
T Consensus       175 -------~l~~~G~R~~~r-f-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~--  243 (516)
T KOG0582|consen  175 -------SLFDSGDRQVTR-F-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL--  243 (516)
T ss_pred             -------eecccCceeeEe-e-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH--
Confidence                   344444111111 1 45799999999999654  3799999999999999999999999998888776643  


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .+-+.+|......                                      ...+....++..+++++..||++||++||
T Consensus       244 tLqn~pp~~~t~~--------------------------------------~~~d~~k~~~ksf~e~i~~CL~kDP~kRp  285 (516)
T KOG0582|consen  244 TLQNDPPTLLTSG--------------------------------------LDKDEDKKFSKSFREMIALCLVKDPSKRP  285 (516)
T ss_pred             HhcCCCCCccccc--------------------------------------CChHHhhhhcHHHHHHHHHHhhcCcccCC
Confidence            3334443211000                                      00011123456899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVRR  395 (405)
Q Consensus       379 ta~elL~hp~f~~~~~~  395 (405)
                      ||+++|+|+||++....
T Consensus       286 tAskLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  286 TASKLLKHAFFKKAKSK  302 (516)
T ss_pred             CHHHHhccHHHhhccch
Confidence            99999999999987543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-46  Score=327.41  Aligned_cols=213  Identities=32%  Similarity=0.507  Sum_probs=181.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc---hhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ..|+|+++||+|+||.||++.+..+|+.||.|.++.   ..+.++....|+.+|++|+|+||+...              
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            469999999999999999999999999999999864   335567788999999999999983211              


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHH--CC--cEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHE--LR--LIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~--~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                         .+.++|..+++++.|++.||.+||+  ..  |+||||||.||+++.+|             
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g-------------  165 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG-------------  165 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC-------------
Confidence                               3568999999999999999999998  44  99999999999997655             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCcc---ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS---YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                                    .+||+|||++++.....+   +++|||+||+||.+.+.+|+.++||||+||++|||+.-++||.+.
T Consensus       166 --------------vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~  231 (375)
T KOG0591|consen  166 --------------VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD  231 (375)
T ss_pred             --------------ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc
Confidence                          578888888877765543   479999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCC-CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGP-LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      +-.+....|.+..-+ +|.                                                 +.+|.++..||.
T Consensus       232 n~~~L~~KI~qgd~~~~p~-------------------------------------------------~~YS~~l~~li~  262 (375)
T KOG0591|consen  232 NLLSLCKKIEQGDYPPLPD-------------------------------------------------EHYSTDLRELIN  262 (375)
T ss_pred             cHHHHHHHHHcCCCCCCcH-------------------------------------------------HHhhhHHHHHHH
Confidence            777777777664221 221                                                 234778999999


Q ss_pred             HccccCCCCCCCH
Q 015532          368 GLLRYDPAERLKA  380 (405)
Q Consensus       368 ~~L~~dP~~Rpta  380 (405)
                      .|+..||+.||+.
T Consensus       263 ~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  263 MCIAVDPEQRPDT  275 (375)
T ss_pred             HHccCCcccCCCc
Confidence            9999999999985

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-45  Score=335.08  Aligned_cols=237  Identities=28%  Similarity=0.458  Sum_probs=196.5

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ..+.|.+.++||+|+||+||+|+++.++..||||.+.+.   .+..+....||.||+.++|+|+++..            
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            346799999999999999999999999999999999653   45677788999999999999985432            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     .+.+++..++.++.||+.||++||+++||||||||+|||++....                    
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~--------------------  147 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR--------------------  147 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC--------------------
Confidence                           357899999999999999999999999999999999999976410                    


Q ss_pred             CCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                       .+....+||+|||+|+......  .+.+|++.|||||++....|+.|+|+||+|+|+|+|++|++||...+..+.+..+
T Consensus       148 -~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~  226 (429)
T KOG0595|consen  148 -NDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYI  226 (429)
T ss_pred             -CCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence             0111578999999999877553  4579999999999999999999999999999999999999999998888877655


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+.-.-+|.                                               .....+..+.+|+...|+.+|.+|
T Consensus       227 ~k~~~~~~~-----------------------------------------------~~~~~s~~~~~Ll~~ll~~~~~~~  259 (429)
T KOG0595|consen  227 KKGNEIVPV-----------------------------------------------LPAELSNPLRELLISLLQRNPKDR  259 (429)
T ss_pred             hccccccCc-----------------------------------------------hhhhccCchhhhhhHHHhcCcccc
Confidence            442211110                                               011234466789999999999999


Q ss_pred             CCHHHHHcCCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDVR  394 (405)
Q Consensus       378 pta~elL~hp~f~~~~~  394 (405)
                      .+..+-+.|+++..+..
T Consensus       260 ~~~~~~~~~~~l~~~p~  276 (429)
T KOG0595|consen  260 ISFEDFFDHPFLAANPQ  276 (429)
T ss_pred             CchHHhhhhhhcccCcc
Confidence            99999999999987653

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-44  Score=347.50  Aligned_cols=230  Identities=25%  Similarity=0.379  Sum_probs=190.2

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHh-hcCCCC-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA-RHDIGG-------------  152 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~-~~~~~~-------------  152 (405)
                      .+.|.++++||+|+||+|++|..+.+++.||||++++..    ..-+..+.|..|+.... ||.+..             
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f  446 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF  446 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence            368999999999999999999999999999999998743    34567788999998888 444311             


Q ss_pred             --------Cc-----cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          153 --------TR-----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       153 --------~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                              .+     .+.|++..++.|+..|+.||+|||++|||+||||.+|||++.+|++||+|||+++...       
T Consensus       447 vmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-------  519 (694)
T KOG0694|consen  447 VMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-------  519 (694)
T ss_pred             EEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC-------
Confidence                    11     2578999999999999999999999999999999999999888766555555443221       


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                                       ......++++||+.|||||++.+..|+.++|+|||||+|||||.|+.||.+++..++...|..
T Consensus       520 -----------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~  582 (694)
T KOG0694|consen  520 -----------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN  582 (694)
T ss_pred             -----------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence                             122345668999999999999999999999999999999999999999999999998887765


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .....|                                                  ..++.++.++|+++|++||++|..
T Consensus       583 d~~~yP--------------------------------------------------~~ls~ea~~il~~ll~k~p~kRLG  612 (694)
T KOG0694|consen  583 DEVRYP--------------------------------------------------RFLSKEAIAIMRRLLRKNPEKRLG  612 (694)
T ss_pred             CCCCCC--------------------------------------------------CcccHHHHHHHHHHhccCcccccC
Confidence            432222                                                  344778999999999999999994


Q ss_pred             -----HHHHHcCCCCCCCCC
Q 015532          380 -----AREALRHPFFTRDVR  394 (405)
Q Consensus       380 -----a~elL~hp~f~~~~~  394 (405)
                           +++|.+||||+.-.+
T Consensus       613 ~~e~d~~~i~~hpFFr~i~w  632 (694)
T KOG0694|consen  613 SGERDAEDIKKHPFFRSIDW  632 (694)
T ss_pred             CCCCCchhhhhCCccccCCH
Confidence                 689999999997543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-45  Score=347.18  Aligned_cols=227  Identities=31%  Similarity=0.450  Sum_probs=187.4

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch-----h-hhhHHHHHHHHHHHHHh-hcCCCCCc-------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----N-KYREAAMIEIDVLQRLA-RHDIGGTR-------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-----~-~~~~~~~~E~~il~~l~-~~~~~~~~-------  154 (405)
                      ...++|.+.+.||+|+||+|++|++..+++.||||++++.     . ...+...+|+.+++.+. |+||....       
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3457899999999999999999999999999999987653     1 23455668999999999 88873211       


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          .+.+.|.+++.+++||+.|++|||++||+||||||+|||++.+                 
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~-----------------  156 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGN-----------------  156 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCC-----------------
Confidence                                2578899999999999999999999999999999999999764                 


Q ss_pred             CCcccCCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCC-CC-CchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLG-WN-YPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                               ...+||+|||++....   ....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+
T Consensus       157 ---------~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~  227 (370)
T KOG0583|consen  157 ---------EGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN  227 (370)
T ss_pred             ---------CCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc
Confidence                     1467788888777652   2345579999999999999987 86 88999999999999999999999866


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCc-hHHHHHHHHH
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS-AGDLIDLLQG  368 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ll~~  368 (405)
                      .......|.+..-.+|                                                  ..+ ++++++|+.+
T Consensus       228 ~~~l~~ki~~~~~~~p--------------------------------------------------~~~~S~~~~~Li~~  257 (370)
T KOG0583|consen  228 VPNLYRKIRKGEFKIP--------------------------------------------------SYLLSPEARSLIEK  257 (370)
T ss_pred             HHHHHHHHhcCCccCC--------------------------------------------------CCcCCHHHHHHHHH
Confidence            6555554433222221                                                  233 7789999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      ||..||.+|+|+.++++||||+.
T Consensus       258 mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  258 MLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HcCCCcccCCCHHHHhhChhhcc
Confidence            99999999999999999999998

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-45  Score=349.39  Aligned_cols=234  Identities=26%  Similarity=0.412  Sum_probs=191.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-hhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ...|....+||+|+.|.||.|+...+++.||||.+..... .++..++|+.+|+.+.|+|++..+               
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            4579999999999999999999999999999999976544 356678999999999999984322               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+||||+.+.....        
T Consensus       352 m~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--------  423 (550)
T KOG0578|consen  352 MEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--------  423 (550)
T ss_pred             cCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc--------
Confidence                       1346899999999999999999999999999999999999877755555554433222111        


Q ss_pred             CCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 015532          224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP  303 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~  303 (405)
                                      ....+.+||++|||||++....|++++||||||+++.||+-|++||-..+....+..|...   
T Consensus       424 ----------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n---  484 (550)
T KOG0578|consen  424 ----------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---  484 (550)
T ss_pred             ----------------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc---
Confidence                            1345679999999999999999999999999999999999999999877776666555331   


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHH
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA  383 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el  383 (405)
                                                                  ..+.....+.+|+.++|||.+||+.|+++|++|.|+
T Consensus       485 --------------------------------------------g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eL  520 (550)
T KOG0578|consen  485 --------------------------------------------GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKEL  520 (550)
T ss_pred             --------------------------------------------CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHH
Confidence                                                        122234456779999999999999999999999999


Q ss_pred             HcCCCCCCCCCC
Q 015532          384 LRHPFFTRDVRR  395 (405)
Q Consensus       384 L~hp~f~~~~~~  395 (405)
                      |+||||+.....
T Consensus       521 L~HpFl~~a~p~  532 (550)
T KOG0578|consen  521 LEHPFLKMAKPE  532 (550)
T ss_pred             hcChhhhhcCCH
Confidence            999999765443

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.1e-45  Score=348.41  Aligned_cols=225  Identities=30%  Similarity=0.517  Sum_probs=187.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+..   +......+|++|++.|.|+||+...              
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            46889999999999999999999999999999996543   3445678899999999999985422              


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  .+.++|+.++.++.|++.||.|||+++|+|||+||.|||++..|                        
T Consensus        82 ~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~------------------------  137 (808)
T KOG0597|consen   82 YAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG------------------------  137 (808)
T ss_pred             hhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC------------------------
Confidence                        36789999999999999999999999999999999999987655                        


Q ss_pred             CCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                         .+|+||||+|+......   +...|||.|||||++.+.+|+..+|+|||||++||+++|++||...+-.+....|..
T Consensus       138 ---~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~  214 (808)
T KOG0597|consen  138 ---TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK  214 (808)
T ss_pred             ---ceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc
Confidence               56666666666544433   235799999999999999999999999999999999999999987665555555543


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ..-+.|                                                  ...+..+++||..+|.+||.+|.|
T Consensus       215 d~v~~p--------------------------------------------------~~~S~~f~nfl~gLL~kdP~~Rlt  244 (808)
T KOG0597|consen  215 DPVKPP--------------------------------------------------STASSSFVNFLQGLLIKDPAQRLT  244 (808)
T ss_pred             CCCCCc--------------------------------------------------ccccHHHHHHHHHHhhcChhhccc
Confidence            222111                                                  234678999999999999999999


Q ss_pred             HHHHHcCCCCCCCC
Q 015532          380 AREALRHPFFTRDV  393 (405)
Q Consensus       380 a~elL~hp~f~~~~  393 (405)
                      +.+++.|||+++..
T Consensus       245 W~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  245 WTDLLGHPFWKGKI  258 (808)
T ss_pred             HHHHhcChHHhhhh
Confidence            99999999998753

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=8.3e-44  Score=332.97  Aligned_cols=251  Identities=31%  Similarity=0.502  Sum_probs=191.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.++||+|+||+||+|++..+++.||+|+++...  .....+.+|+.+++.+.|+++....               
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            56999999999999999999999999999999986432  2345677899999999999873311               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                       
T Consensus        85 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~-----------------------  141 (288)
T cd07871          85 LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGE-----------------------  141 (288)
T ss_pred             CCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC-----------------------
Confidence                        123678889999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          +||+|||++......   .....|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.
T Consensus       142 ----~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~  217 (288)
T cd07871         142 ----LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIF  217 (288)
T ss_pred             ----EEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                555556555432211   122468899999999876 468999999999999999999999999998888888888


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +..+.++...+....... .+.    ...++.              . ............+.+++|||.+||++||.+|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~-~~~----~~~~~~--------------~-~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~  277 (288)
T cd07871         218 RLLGTPTEETWPGITSNE-EFR----SYLFPQ--------------Y-RAQPLINHAPRLDTDGIDLLSSLLLYETKSRI  277 (288)
T ss_pred             HHhCCCChHHhhccccch-hhh----ccccCc--------------c-CCCchHHhCCCCCHHHHHHHHHhcCcCcccCC
Confidence            888887766543221100 000    000000              0 00011122234577899999999999999999


Q ss_pred             CHHHHHcCCCC
Q 015532          379 KAREALRHPFF  389 (405)
Q Consensus       379 ta~elL~hp~f  389 (405)
                      |++|+|+||||
T Consensus       278 t~~~~l~hp~f  288 (288)
T cd07871         278 SAEAALRHSYF  288 (288)
T ss_pred             CHHHHhcCCCC
Confidence            99999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.9e-43  Score=330.11  Aligned_cols=253  Identities=32%  Similarity=0.609  Sum_probs=194.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+++.||||+++...   ...+.+.+|+.+++.+.|+++....              
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46999999999999999999999999999999986532   2345677899999999999874321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+||+++.++.                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~----------------------  138 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDV----------------------  138 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc----------------------
Confidence                         135788899999999999999999999999999999999976654                      


Q ss_pred             CCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           ++|+|||++......    .....||..|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+
T Consensus       139 -----~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~  213 (287)
T cd07848         139 -----LKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI  213 (287)
T ss_pred             -----EEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                 555566555433211    12346899999999999988999999999999999999999999998888888888


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+..+++|............ +    ....++.....             ...........+.++.+||.+||++||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~-------------~~~~~~~~~~~s~~~~dll~~~L~~~P~~R  275 (287)
T cd07848         214 QKVLGPLPAEQMKLFYSNPR-F----HGLRFPAVNHP-------------QSLERRYLGILSGVLLDLMKNLLKLNPTDR  275 (287)
T ss_pred             HHhhCCCCHHHHHhhhccch-h----cccccCcccCc-------------ccHHHhhhcccCHHHHHHHHHHccCCcccC
Confidence            89999988765433211100 0    00111110000             000111223457789999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||++|+|+||||
T Consensus       276 ~s~~~~l~hp~f  287 (287)
T cd07848         276 YLTEQCLNHPAF  287 (287)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.5e-44  Score=330.43  Aligned_cols=255  Identities=26%  Similarity=0.360  Sum_probs=200.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCC---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGG---------------  152 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~---------------  152 (405)
                      +.|++++.||+|.-|+||+|+.+.++..+|+|++.+..    +...++..|-+||+.++||.+..               
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            67999999999999999999999999999999997533    23355677999999999997621               


Q ss_pred             --------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          153 --------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       153 --------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                    .....|++..++.|+.+|+.||+|||-.|||.|||||+||||.++|++.++||.|+.++.......
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~  236 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV  236 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence                          124678999999999999999999999999999999999999999999999999987764322211


Q ss_pred             cCCC-----CCCC---cee----------------ccCCC--------CccccCCccceecCCCcchhHHHhCCCCCCch
Q 015532          219 KNLP-----KSSA---IKL----------------IDFGS--------TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPC  266 (405)
Q Consensus       219 ~~~~-----~~~~---~kl----------------~Dfg~--------a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  266 (405)
                      ...+     ....   +.+                .|++.        |.........++||-.|+|||++.|.+++.++
T Consensus       237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV  316 (459)
T KOG0610|consen  237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV  316 (459)
T ss_pred             ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence            1100     0000   001                12221        11111223457999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhcc
Q 015532          267 DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  346 (405)
Q Consensus       267 DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (405)
                      |+|+|||++|||+.|..||.|.++.+.+..|....-.+|.                                        
T Consensus       317 DWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~----------------------------------------  356 (459)
T KOG0610|consen  317 DWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE----------------------------------------  356 (459)
T ss_pred             hHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC----------------------------------------
Confidence            9999999999999999999999998888776543222221                                        


Q ss_pred             chhhhhhcccCchHHHHHHHHHccccCCCCCCC----HHHHHcCCCCCCCCC
Q 015532          347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK----AREALRHPFFTRDVR  394 (405)
Q Consensus       347 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt----a~elL~hp~f~~~~~  394 (405)
                              ...++.+++|||+++|.+||++|..    |.||-+||||++-.+
T Consensus       357 --------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW  400 (459)
T KOG0610|consen  357 --------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW  400 (459)
T ss_pred             --------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence                    1144678999999999999999998    999999999998643

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=9.5e-45  Score=339.01  Aligned_cols=288  Identities=32%  Similarity=0.573  Sum_probs=228.4

Q ss_pred             CCCCCCCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCC
Q 015532           73 WRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG  152 (405)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~  152 (405)
                      ..+++..|||.+.+|+.+..+|.+....|+|-|++|..|.+...|+.||||+|+.++.....-+.|++||++|....-..
T Consensus       413 DNWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Ed  492 (752)
T KOG0670|consen  413 DNWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPED  492 (752)
T ss_pred             cCcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchh
Confidence            34678899999999999999999999999999999999999999999999999988877888899999999987543211


Q ss_pred             C------------------c-----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          153 T------------------R-----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       153 ~------------------~-----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                      .                  .                 .-.|....++.|+.|+..||..|-.+||+|.||||+|||++..
T Consensus       493 k~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~  572 (752)
T KOG0670|consen  493 KFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNES  572 (752)
T ss_pred             hhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccC
Confidence            0                  0                 1235567788899999999999999999999999999999763


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-cceecCCCcchhHHHhCCCCCCchhHHHHHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  276 (405)
                                                ...+||||||.|.+...+. +.+.-+..|.|||++.|.+|+...|+||+||+||
T Consensus       573 --------------------------k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLY  626 (752)
T KOG0670|consen  573 --------------------------KNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLY  626 (752)
T ss_pred             --------------------------cceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeE
Confidence                                      3468999999998776554 3355678899999999999999999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCC---------------CCCCchhhHHHH
Q 015532          277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP---------------DGATSRDSMRAV  341 (405)
Q Consensus       277 ~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~  341 (405)
                      ||.||+..|+|.++.+++..+..+-|++|..|+.+.......|- ..-+.-+.               ...........+
T Consensus       627 ElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD-~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l  705 (752)
T KOG0670|consen  627 ELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFD-QDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSEL  705 (752)
T ss_pred             EeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcc-cccceEEEeccccccceeEEEecccCcchhHHHHH
Confidence            99999999999999999999999999999999887654444332 22111110               001111111222


Q ss_pred             HHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      ...++++...    ...-.+|++||.+||..||++|.|..|+|+||||+.
T Consensus       706 ~~~q~~~deq----~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  706 IAVQRLPDEQ----PKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             hccCCCCchh----HHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            2222222211    122457999999999999999999999999999985

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.4e-43  Score=338.31  Aligned_cols=278  Identities=28%  Similarity=0.457  Sum_probs=206.5

Q ss_pred             CCCceEeeCC---ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCC
Q 015532           79 DGHYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGG  152 (405)
Q Consensus        79 ~~~~~~~~~~---~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~  152 (405)
                      .++|.+..++   .+.++|++.+.||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.+.|+++..
T Consensus         5 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   84 (359)
T cd07876           5 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIIS   84 (359)
T ss_pred             CCcceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEee
Confidence            3456666665   4568999999999999999999999999999999998642   233456778999999999998743


Q ss_pred             Cc------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccccc
Q 015532          153 TR------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       153 ~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~  202 (405)
                      ..                              ...+++..+..++.||+.||.|||++||+||||||+|||++.++.   
T Consensus        85 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~---  161 (359)
T cd07876          85 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT---  161 (359)
T ss_pred             eeeeeccCCCccccceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC---
Confidence            11                              123577888999999999999999999999999999999977654   


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                                              ++|+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       162 ------------------------~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~t  217 (359)
T cd07876         162 ------------------------LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK  217 (359)
T ss_pred             ------------------------EEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHh
Confidence                                    555666655432211  123478999999999999899999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+.+..+.+..+.+.++.++..+..........+........  . .    .....+.....+. ........++
T Consensus       218 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~----~~~~~~~~~~~~~-~~~~~~~~~~  289 (359)
T cd07876         218 GSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYP--G-I----SFEELFPDWIFPS-ESERDKLKTS  289 (359)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCC--C-c----chhhhcccccccc-ccccccccch
Confidence            99999998888888888888888887766555444444433221111  0 0    0000000000000 0011122356


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      .+++||.+||++||++|||+.|+|+||||+.
T Consensus       290 ~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         290 QARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             hHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            8899999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.9e-43  Score=347.56  Aligned_cols=254  Identities=29%  Similarity=0.490  Sum_probs=194.6

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ....+|++.+.||+|+||.||+|.+..+++.||||++.....   ...+|+.+|+.+.|++++...              
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            345689999999999999999999999999999998854322   234699999999999885310              


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++..++.++.||+.||.|||++||+||||||+|||++.++            
T Consensus       140 ~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~------------  207 (440)
T PTZ00036        140 IFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT------------  207 (440)
T ss_pred             eEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC------------
Confidence                                    12466778889999999999999999999999999999996432            


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                    ..+||+|||++......  .....||+.|+|||++.+. .|+.++|||||||++|+|++|.+||.+
T Consensus       208 --------------~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~  273 (440)
T PTZ00036        208 --------------HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG  273 (440)
T ss_pred             --------------CceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                          24677777777644322  2235789999999998765 689999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      ....+.+..+.+.+|.++............       ...++...              ...+....+...++++++||.
T Consensus       274 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~-------~~~~~~~~--------------~~~l~~~~p~~~~~~~~~li~  332 (440)
T PTZ00036        274 QSSVDQLVRIIQVLGTPTEDQLKEMNPNYA-------DIKFPDVK--------------PKDLKKVFPKGTPDDAINFIS  332 (440)
T ss_pred             CChHHHHHHHHHHhCCCCHHHHHHhchhhh-------cccCCccC--------------chhHHHHhccCCCHHHHHHHH
Confidence            998899999988888877654432211100       11111100              000111122345678999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +||++||++|+|+.|+|+||||..-
T Consensus       333 ~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        333 QFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHCCCChhHCcCHHHHhCChhHHhh
Confidence            9999999999999999999999753

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=7e-43  Score=336.41  Aligned_cols=278  Identities=28%  Similarity=0.417  Sum_probs=205.1

Q ss_pred             CCceEeeCC---ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCC
Q 015532           80 GHYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT  153 (405)
Q Consensus        80 ~~~~~~~~~---~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~  153 (405)
                      ++|++..|+   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.+.|+++...
T Consensus         2 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   81 (355)
T cd07874           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL   81 (355)
T ss_pred             cceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhce
Confidence            345566665   3568999999999999999999999999999999998642   2234567789999999999987432


Q ss_pred             c------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          154 R------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       154 ~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                      .                              ...+++..+..++.||+.||.|||++||+||||||+|||++.++.    
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~----  157 (355)
T cd07874          82 LNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----  157 (355)
T ss_pred             eeeeeccccccccceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCC----
Confidence            1                              123567788899999999999999999999999999999976554    


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                                             +||+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|
T Consensus       158 -----------------------~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g  214 (355)
T cd07874         158 -----------------------LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH  214 (355)
T ss_pred             -----------------------EEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence                                   566666665443222  1234789999999999998999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ..||.+.+..+....+...++.....+..........+........-   ...    ....... ............+..
T Consensus       215 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~-~~~~~~~~~~~~~~~  286 (355)
T cd07874         215 KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG---LTF----PKLFPDS-LFPADSEHNKLKASQ  286 (355)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc---ccc----hhhcccc-ccccccccccccchH
Confidence            99999988888887777777776666655554444444433221110   000    0000000 000001112234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +.+||.+||+.||++|||+.|+|+||||+..
T Consensus       287 ~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         287 ARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             HHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence            8999999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=7.3e-43  Score=333.80  Aligned_cols=255  Identities=29%  Similarity=0.492  Sum_probs=193.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.++||+|+||.||+|++..+++.||||+++..   ......+.+|+.+++.+.|+++....               
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            699999999999999999999999999999998642   12234577899999999999874211               


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+                  
T Consensus        81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~------------------  142 (338)
T cd07859          81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKL------------------  142 (338)
T ss_pred             EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcE------------------
Confidence                            1247888999999999999999999999999999999999876655                  


Q ss_pred             cCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                               ||+|||++......      ....+||+.|+|||++.+  ..++.++|||||||++|+|++|++||.+.+.
T Consensus       143 ---------kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~  213 (338)
T cd07859         143 ---------KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV  213 (338)
T ss_pred             ---------EEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh
Confidence                     55555544322111      122478999999999876  5789999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhh-HHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ...+..+....|.++........... ..+....                  .  ...+..........++.+.+||.+|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------------~--~~~~~~~~~~~~~~~~~~~~li~~~  273 (338)
T cd07859         214 VHQLDLITDLLGTPSPETISRVRNEKARRYLSSM------------------R--KKQPVPFSQKFPNADPLALRLLERL  273 (338)
T ss_pred             HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhh------------------c--ccCCCchHHhcCCCChHHHHHHHHH
Confidence            88888888888887776554332111 1111000                  0  0000111112234567889999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      |+.||++|||++|+|+||||++-..
T Consensus       274 l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         274 LAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             cCcCcccCCCHHHHhcCchhhhcCc
Confidence            9999999999999999999987433

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2e-42  Score=334.30  Aligned_cols=276  Identities=28%  Similarity=0.457  Sum_probs=204.8

Q ss_pred             CceEeeCC---ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc
Q 015532           81 HYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR  154 (405)
Q Consensus        81 ~~~~~~~~---~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~  154 (405)
                      .+.+..++   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.+.|+++....
T Consensus        10 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~   89 (364)
T cd07875          10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL   89 (364)
T ss_pred             ceeeecCcchhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccc
Confidence            34444444   3468999999999999999999999999999999998642   23345677899999999999885321


Q ss_pred             ------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCC
Q 015532          155 ------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  204 (405)
Q Consensus       155 ------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~d  204 (405)
                                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.++      
T Consensus        90 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~------  163 (364)
T cd07875          90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC------  163 (364)
T ss_pred             eeecccccccccCeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC------
Confidence                                          11356778889999999999999999999999999999997655      


Q ss_pred             ccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCC
Q 015532          205 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       205 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~  282 (405)
                                           .+||+|||++.......  ....||..|+|||++.+..++.++|||||||++|+|++|.
T Consensus       164 ---------------------~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~  222 (364)
T cd07875         164 ---------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG  222 (364)
T ss_pred             ---------------------cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCC
Confidence                                 45666666665433221  2347899999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||.+.+..+....+....+.++..+..........+........-.       ...........+ .........+..+
T Consensus       223 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~  294 (364)
T cd07875         223 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY-------SFEKLFPDVLFP-ADSEHNKLKASQA  294 (364)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCC-------ChHhhCcccccc-ccccccccccHHH
Confidence            99999998888888888888877766655554444443322111000       000000000000 0001112235688


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      ++||.+||+.||++|||+.|+|+||||..
T Consensus       295 ~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         295 RDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            99999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-44  Score=330.22  Aligned_cols=228  Identities=32%  Similarity=0.498  Sum_probs=178.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhh-hHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .+|...+.||+|+||.||++.+..+|+.+|||.+...+.. .+...+|+.+|.+|.|++|+...                
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            4588889999999999999999999999999998654221 35578899999999998874221                


Q ss_pred             -------------cc-cCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEec-ccccccCCccccccCCCCCCccc
Q 015532          155 -------------YR-SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 -------------~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~-~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                   ++ .+++..++.+.+||++||.|||++|||||||||+|||++. ++                     
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~---------------------  155 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG---------------------  155 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC---------------------
Confidence                         12 5899999999999999999999999999999999999976 34                     


Q ss_pred             CCCCCCCceeccCCCCccccC------CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCC-ChH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH-ENL  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~-~~~  291 (405)
                            .+||+|||++.....      ......||+.|||||++... ....++|||||||++.||+||.+||... ...
T Consensus       156 ------~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~  229 (313)
T KOG0198|consen  156 ------DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA  229 (313)
T ss_pred             ------eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH
Confidence                  466666666654331      12346899999999999953 2335999999999999999999999763 222


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +.+..+... ..                                               ....+..+++++++||.+||.
T Consensus       230 ~~~~~ig~~-~~-----------------------------------------------~P~ip~~ls~~a~~Fl~~C~~  261 (313)
T KOG0198|consen  230 EALLLIGRE-DS-----------------------------------------------LPEIPDSLSDEAKDFLRKCFK  261 (313)
T ss_pred             HHHHHHhcc-CC-----------------------------------------------CCCCCcccCHHHHHHHHHHhh
Confidence            222111110 00                                               012334568899999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      +||++||||+++|+|||.++...
T Consensus       262 ~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  262 RDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             cCcccCcCHHHHhhChhhhcccc
Confidence            99999999999999999988654

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-43  Score=336.06  Aligned_cols=240  Identities=32%  Similarity=0.502  Sum_probs=200.4

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHh-hcCCCCCc-------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLA-RHDIGGTR-------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~-~~~~~~~~-------  154 (405)
                      .+.+...|++.+.||+|.||+||+|+++.+|+.||+|++.+...    ..+...+|++||+++. |++++...       
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~  109 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD  109 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence            45567889999999999999999999999999999999965432    3467889999999999 88873211       


Q ss_pred             ------------------cc-cCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 ------------------YR-SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 ------------------~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                        .. .+++..+..++.||+.++.|||+.||+||||||+|+|+....                 
T Consensus       110 ~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~-----------------  172 (382)
T KOG0032|consen  110 SVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD-----------------  172 (382)
T ss_pred             eEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc-----------------
Confidence                              11 299999999999999999999999999999999999997532                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                            ..+..++++|||++.....  .....+||+.|+|||++....|+..+||||+||++|.|++|.+||.+.+....
T Consensus       173 ------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~  246 (382)
T KOG0032|consen  173 ------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI  246 (382)
T ss_pred             ------CCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH
Confidence                  1235799999999988776  33457999999999999999999999999999999999999999999887776


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.+.-.                                              ......++.++..+++||++||..|
T Consensus       247 ~~~i~~~~~----------------------------------------------~f~~~~w~~is~~akd~i~~ll~~d  280 (382)
T KOG0032|consen  247 FLAILRGDF----------------------------------------------DFTSEPWDDISESAKDFIRKLLEFD  280 (382)
T ss_pred             HHHHHcCCC----------------------------------------------CCCCCCccccCHHHHHHHHHhcccC
Confidence            665443211                                              1122344567889999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~~  395 (405)
                      |.+|+||.++|+|||++.....
T Consensus       281 p~~R~ta~~~L~HpWi~~~~~~  302 (382)
T KOG0032|consen  281 PRKRLTAAQALQHPWIKSIGEA  302 (382)
T ss_pred             cccCCCHHHHhcCccccCCccc
Confidence            9999999999999999986433

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.1e-43  Score=341.34  Aligned_cols=255  Identities=23%  Similarity=0.325  Sum_probs=187.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ..+|+++++||+|+||.||+|.+..+++.||||....     ..+.+|+++++.+.|++++...                
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            3679999999999999999999999999999997542     3467899999999999985421                


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                         
T Consensus       166 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~-------------------------  220 (391)
T PHA03212        166 KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD-------------------------  220 (391)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCC-------------------------
Confidence                      134678889999999999999999999999999999999976554                         


Q ss_pred             CCceeccCCCCccccC----CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-------ChHHH
Q 015532          225 SAIKLIDFGSTTFEHQ----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-------ENLEH  293 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~-------~~~~~  293 (405)
                        ++|+|||++.....    ......||+.|+|||++.+..++.++|||||||++|+|++|..||...       ....+
T Consensus       221 --vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  298 (391)
T PHA03212        221 --VCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQ  298 (391)
T ss_pred             --EEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHH
Confidence              56666666543211    112357999999999999989999999999999999999999887542       23456


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+.+..|..|..+...........+........ ...              .....+......+.++.+||.+||++|
T Consensus       299 l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~~~~~~~l~~Li~~mL~~d  363 (391)
T PHA03212        299 IKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSS-RKP--------------GSRPLWTNLYELPIDLEYLICKMLAFD  363 (391)
T ss_pred             HHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccC-CCC--------------CCCCCHHHHhhhhhhHHHHHHHHhcCC
Confidence            67777777877655432211111111100000000 000              000001111234568899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRD  392 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~  392 (405)
                      |++||||+|+|+||||+..
T Consensus       364 P~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        364 AHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             hhhCCCHHHHhcChhhccC
Confidence            9999999999999999874

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-43  Score=328.49  Aligned_cols=224  Identities=26%  Similarity=0.329  Sum_probs=182.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||||++....    ...+.+.+|+.+++.+.|+++....             
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36999999999999999999999999999999986432    2345577899999999999873311             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.+|                      
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~----------------------  138 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG----------------------  138 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC----------------------
Confidence                          13468888999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .++|+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus       139 -----~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~  213 (291)
T cd05612         139 -----HIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG  213 (291)
T ss_pred             -----CEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence                 467777777665544444567999999999999988999999999999999999999999887665554443221


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC-
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK-  379 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt-  379 (405)
                      .                        ..+                          ....+..+++||.+||+.||.+|++ 
T Consensus       214 ~------------------------~~~--------------------------~~~~~~~~~~li~~~l~~dp~~R~~~  243 (291)
T cd05612         214 K------------------------LEF--------------------------PRHLDLYAKDLIKKLLVVDRTRRLGN  243 (291)
T ss_pred             C------------------------cCC--------------------------CccCCHHHHHHHHHHcCCCHHHccCC
Confidence            1                        011                          1233568899999999999999995 


Q ss_pred             ----HHHHHcCCCCCCC
Q 015532          380 ----AREALRHPFFTRD  392 (405)
Q Consensus       380 ----a~elL~hp~f~~~  392 (405)
                          ++++++||||+.-
T Consensus       244 ~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         244 MKNGADDVKNHRWFKSV  260 (291)
T ss_pred             ccCCHHHHhcCccccCC
Confidence                9999999999753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.2e-42  Score=333.14  Aligned_cols=257  Identities=28%  Similarity=0.516  Sum_probs=196.8

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|++.+.||+|+||+||+|.+..+++.||||++....   .....+.+|+.+++.+.|+++....            
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            4578999999999999999999999999999999986432   2234567899999999998874211            


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++.++                 
T Consensus        93 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~-----------------  155 (343)
T cd07878          93 NEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC-----------------  155 (343)
T ss_pred             CcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC-----------------
Confidence                               13478899999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                                .+||+|||++...........||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+
T Consensus       156 ----------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  225 (343)
T cd07878         156 ----------ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQL  225 (343)
T ss_pred             ----------CEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                      4566666666555444445678999999999987 46889999999999999999999999998888888


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhH-HhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAE-KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ..+....+..+............ .+......  .+                  ...........++.+.+||.+||+.|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------------~~~~~~~~~~~~~~~~~li~~mL~~d  285 (343)
T cd07878         226 KRIMEVVGTPSPEVLKKISSEHARKYIQSLPH--MP------------------QQDLKKIFRGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HHHHHHhCCCCHHHHHhcchhhHHHHhhcccc--cc------------------chhHHHhccCCCHHHHHHHHHHcCCC
Confidence            88888777766655433211111 11100000  00                  00001112234567899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~  393 (405)
                      |++|||+.|+|+||||.+..
T Consensus       286 p~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         286 SDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             hhhCCCHHHHhcCcchhccC
Confidence            99999999999999998753

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=4.7e-43  Score=334.07  Aligned_cols=224  Identities=27%  Similarity=0.406  Sum_probs=183.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+.+|+.+++.+.|+++....             
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            56999999999999999999999999999999997532    2345677899999999999884321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++                      
T Consensus        98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~----------------------  155 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG----------------------  155 (329)
T ss_pred             cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC----------------------
Confidence                          13568889999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus       156 -----~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~  230 (329)
T PTZ00263        156 -----HVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG  230 (329)
T ss_pred             -----CEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC
Confidence                 467777777665544444568999999999999989999999999999999999999999877665544433221


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC-
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK-  379 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt-  379 (405)
                      .                        ..+                          +...+..+.+||.+||+.||++|++ 
T Consensus       231 ~------------------------~~~--------------------------p~~~~~~~~~li~~~L~~dP~~R~~~  260 (329)
T PTZ00263        231 R------------------------LKF--------------------------PNWFDGRARDLVKGLLQTDHTKRLGT  260 (329)
T ss_pred             C------------------------cCC--------------------------CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            0                        011                          1224567899999999999999997 


Q ss_pred             ----HHHHHcCCCCCCC
Q 015532          380 ----AREALRHPFFTRD  392 (405)
Q Consensus       380 ----a~elL~hp~f~~~  392 (405)
                          ++++++||||++.
T Consensus       261 ~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        261 LKGGVADVKNHPYFHGA  277 (329)
T ss_pred             CCCCHHHHhcCCccCCC
Confidence                7999999999874

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-44  Score=332.65  Aligned_cols=231  Identities=28%  Similarity=0.423  Sum_probs=185.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..|..++.||+|+||.||+|.+..+++.||||++....  ..-+....|+.+|..+.++++....               
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            35888899999999999999999999999999996532  3446788899999999998873211               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+.+.++..++++++.||.|||.++.+|||||+.|||+...|                        
T Consensus        93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g------------------------  148 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG------------------------  148 (467)
T ss_pred             hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC------------------------
Confidence                        22347888888999999999999999999999999999997655                        


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                         .+||+|||.+......   ..+++||+.|||||++.+..|+.|+||||||++.+||++|.+|+....+...+..|-+
T Consensus       149 ---~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk  225 (467)
T KOG0201|consen  149 ---DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK  225 (467)
T ss_pred             ---cEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC
Confidence               4667777766543322   2458999999999999988999999999999999999999999988766333322211


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .   .|                                              ......+++.+++|+..||.+||+.|||
T Consensus       226 ~---~P----------------------------------------------P~L~~~~S~~~kEFV~~CL~k~P~~Rps  256 (467)
T KOG0201|consen  226 S---AP----------------------------------------------PRLDGDFSPPFKEFVEACLDKNPEFRPS  256 (467)
T ss_pred             C---CC----------------------------------------------CccccccCHHHHHHHHHHhhcCcccCcC
Confidence            0   00                                              0111256788999999999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCcc
Q 015532          380 AREALRHPFFTRDVRRPTL  398 (405)
Q Consensus       380 a~elL~hp~f~~~~~~~~~  398 (405)
                      |.++|+|+|++...+.+.+
T Consensus       257 A~~LLKh~FIk~a~k~s~L  275 (467)
T KOG0201|consen  257 AKELLKHKFIKRAKKTSEL  275 (467)
T ss_pred             HHHHhhhHHHHhcCCchHH
Confidence            9999999999996555443

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=4.3e-42  Score=330.66  Aligned_cols=230  Identities=23%  Similarity=0.398  Sum_probs=173.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..|+++++||+|+||.||+|++..+++.||||++...  ....+.+.+|+++++.+.|+++....               
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            4588899999999999999999999999999998543  23456688999999999999874321               


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              .....+..+..++.||+.||.|||++||+||||||+|||++.++.                           
T Consensus       154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~---------------------------  206 (353)
T PLN00034        154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN---------------------------  206 (353)
T ss_pred             CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC---------------------------
Confidence                    122467788899999999999999999999999999999976654                           


Q ss_pred             ceeccCCCCccccCC---ccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          227 IKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                      +||+|||++......   ....+||..|+|||++..     ...+.++|||||||++|+|++|+.||......+....+.
T Consensus       207 ~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~  286 (353)
T PLN00034        207 VKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC  286 (353)
T ss_pred             EEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH
Confidence            556666655433221   123578999999998743     224568999999999999999999997433222111111


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ......                                              ........+.++.+||.+||+.||++||
T Consensus       287 ~~~~~~----------------------------------------------~~~~~~~~~~~l~~li~~~l~~~P~~Rp  320 (353)
T PLN00034        287 AICMSQ----------------------------------------------PPEAPATASREFRHFISCCLQREPAKRW  320 (353)
T ss_pred             HHhccC----------------------------------------------CCCCCCccCHHHHHHHHHHccCChhhCc
Confidence            110000                                              0011124467899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 ta~elL~hp~f~~~~~  394 (405)
                      |+.|+|+||||.+...
T Consensus       321 t~~ell~hp~~~~~~~  336 (353)
T PLN00034        321 SAMQLLQHPFILRAQP  336 (353)
T ss_pred             CHHHHhcCcccccCCc
Confidence            9999999999998743

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=3.3e-42  Score=324.47  Aligned_cols=258  Identities=28%  Similarity=0.420  Sum_probs=185.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.++||+|+||.||+|++..+++.||||+++...  .......+|+.+++.+.|+++....               
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            67999999999999999999999999999999986432  2234567899999999999984321               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                       
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~-----------------------  141 (303)
T cd07869          85 VHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE-----------------------  141 (303)
T ss_pred             CCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-----------------------
Confidence                        134788899999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccC---CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN-LEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~-~~~~~~i  297 (405)
                          +||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+..+ .+.+..+
T Consensus       142 ----~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  217 (303)
T cd07869         142 ----LKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI  217 (303)
T ss_pred             ----EEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence                55555655543221   11224688999999998764 588999999999999999999999987644 3455556


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ....+.+....+...... ..+. .   ..+.  ..........+.           ....++.+.+||.+||++||++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~--~~~~~~~~~~~~-----------~~~~~~~~~dli~~mL~~dp~~R  279 (303)
T cd07869         218 FLVLGTPNEDTWPGVHSL-PHFK-P---ERFT--LYSPKNLRQAWN-----------KLSYVNHAEDLASKLLQCFPKNR  279 (303)
T ss_pred             HHHhCCCChhhccchhhc-cccc-c---cccc--ccCCccHHHHhh-----------ccCCChHHHHHHHHHhccCchhc
Confidence            665555443221111000 0000 0   0000  000011111111           01235678999999999999999


Q ss_pred             CCHHHHHcCCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDVR  394 (405)
Q Consensus       378 pta~elL~hp~f~~~~~  394 (405)
                      +|++|+|+||||++-..
T Consensus       280 ~s~~~~l~h~~f~~~~~  296 (303)
T cd07869         280 LSAQAALSHEYFSDLPP  296 (303)
T ss_pred             cCHHHHhcCcccccCCh
Confidence            99999999999988543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=4.6e-42  Score=321.26  Aligned_cols=248  Identities=32%  Similarity=0.523  Sum_probs=182.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-CCcEEEEEEecchh---hhhHHHHHHHHHHHHH---hhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRL---ARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l---~~~~~~~~~----------  154 (405)
                      ++|++.+.||+|+||+||+|++.. +++.||||+++...   .......+|+.+++.+   .|+++....          
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            479999999999999999999854 46889999986432   2234556788887776   588764311          


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..++.++.||+.||.|||++||+||||||+|||++.++.            
T Consensus        81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~------------  148 (290)
T cd07862          81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ------------  148 (290)
T ss_pred             CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCC------------
Confidence                                   123678899999999999999999999999999999999976654            


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                     ++|+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+..
T Consensus       149 ---------------~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  213 (290)
T cd07862         149 ---------------IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  213 (290)
T ss_pred             ---------------EEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence                           555666655433221  223568999999999998899999999999999999999999999998


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+.+..+....+.++........             ..+..         .+. ..............+..+.+||.+|
T Consensus       214 ~~~~~~~i~~~~~~~~~~~~~~~~-------------~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~li~~~  270 (290)
T cd07862         214 DVDQLGKILDVIGLPGEEDWPRDV-------------ALPRQ---------AFH-SKSAQPIEKFVTDIDELGKDLLLKC  270 (290)
T ss_pred             HHHHHHHHHHHhCCCChhhchhhh-------------cccch---------hcc-CCCCCCHHHHccCCCHHHHHHHHHH
Confidence            888888887766644332111000             00000         000 0000111112234577899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCC
Q 015532          370 LRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f  389 (405)
                      |+.||++|||+.|+|+||||
T Consensus       271 l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         271 LTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hccCchhcCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-43  Score=303.15  Aligned_cols=224  Identities=28%  Similarity=0.458  Sum_probs=191.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCC--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGT--------------  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~--------------  153 (405)
                      +.|++.+.||+|.||.||+|+.+.++-.||+|++-+..    ....++.+|++|-..|.|+||...              
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            56999999999999999999999999999999996543    234667789999999999998332              


Q ss_pred             ---------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          154 ---------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       154 ---------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                     ....|++.....++.|++.||.|||.++||||||||+|+|++..|                    
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~--------------------  161 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG--------------------  161 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--------------------
Confidence                           134588899999999999999999999999999999999998766                    


Q ss_pred             cCCCCCCCceeccCCCCccc-cCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                             .+|++|||.+... .....+.|||..|.+||+..+..++..+|+|++|++.||++.|.+||...+..+....|
T Consensus       162 -------~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI  234 (281)
T KOG0580|consen  162 -------ELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRI  234 (281)
T ss_pred             -------CeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHH
Confidence                   4677777776655 34456789999999999999999999999999999999999999999988877777777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .++--..|                                                  ..++..+.|||.+||.++|.+|
T Consensus       235 ~k~~~~~p--------------------------------------------------~~is~~a~dlI~~ll~~~p~~r  264 (281)
T KOG0580|consen  235 RKVDLKFP--------------------------------------------------STISGGAADLISRLLVKNPIER  264 (281)
T ss_pred             HHccccCC--------------------------------------------------cccChhHHHHHHHHhccCcccc
Confidence            66533333                                                  3457789999999999999999


Q ss_pred             CCHHHHHcCCCCCCC
Q 015532          378 LKAREALRHPFFTRD  392 (405)
Q Consensus       378 pta~elL~hp~f~~~  392 (405)
                      .+..|++.|||+...
T Consensus       265 ~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  265 LALTEVMDHPWIVAN  279 (281)
T ss_pred             ccHHHHhhhHHHHhc
Confidence            999999999999764

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-43  Score=327.18  Aligned_cols=234  Identities=25%  Similarity=0.416  Sum_probs=200.6

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.+-|.+.+.||+|.|++|-+|++.-||+.||||++.+..   .....+..|+..|+.++|+||+...           
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL   94 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL   94 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence            45677999999999999999999999999999999997643   2345678899999999999985422           


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+.|+.+++|++||+.|+.|||+..+|||||||+||.+-.                     
T Consensus        95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE---------------------  153 (864)
T KOG4717|consen   95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE---------------------  153 (864)
T ss_pred             EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee---------------------
Confidence                             245789999999999999999999999999999999998743                     


Q ss_pred             ccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                           +-+.|||.|||++......  ..+.||+..|-|||++.|..|+ +++||||||||||.|++|++||...++.+.+
T Consensus       154 -----KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL  228 (864)
T KOG4717|consen  154 -----KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL  228 (864)
T ss_pred             -----ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh
Confidence                 3446788888888654433  3567999999999999999998 7899999999999999999999999999999


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      .+|..+--..|.                                                  .++.+++|||..||..||
T Consensus       229 TmImDCKYtvPs--------------------------------------------------hvS~eCrdLI~sMLvRdP  258 (864)
T KOG4717|consen  229 TMIMDCKYTVPS--------------------------------------------------HVSKECRDLIQSMLVRDP  258 (864)
T ss_pred             hhhhcccccCch--------------------------------------------------hhhHHHHHHHHHHHhcCc
Confidence            888776544443                                                  447899999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCCCcc
Q 015532          375 AERLKAREALRHPFFTRDVRRPTL  398 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~~~~  398 (405)
                      .+|.|.++|..|+|++...+.+..
T Consensus       259 kkRAslEeI~s~~Wlq~~D~~~sT  282 (864)
T KOG4717|consen  259 KKRASLEEIVSTSWLQAGDRGLST  282 (864)
T ss_pred             hhhccHHHHhccccccCCCCCccc
Confidence            999999999999999987766544

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.3e-41  Score=329.72  Aligned_cols=254  Identities=27%  Similarity=0.463  Sum_probs=193.2

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      |++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.+.|+++....                
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            78899999999999999999999999999998642   12335677899999999999874211                


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+                   
T Consensus        82 v~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~-------------------  142 (372)
T cd07853          82 VTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVL-------------------  142 (372)
T ss_pred             EeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCE-------------------
Confidence                           1346888999999999999999999999999999999999876654                   


Q ss_pred             CCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                              ||+|||++......    .....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+
T Consensus       143 --------kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  214 (372)
T cd07853         143 --------KICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL  214 (372)
T ss_pred             --------EeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHH
Confidence                    55555554432211    1123678999999999875 4789999999999999999999999999999999


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+...+|..+.............+........ +       .          ...........++++.+||.+||++||
T Consensus       215 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~----------~~~~~~~~~~~~~~~~~li~~mL~~dP  276 (372)
T cd07853         215 DLITDLLGTPSLEAMRSACEGARAHILRGPHKP-P-------S----------LPVLYTLSSQATHEAVHLLCRMLVFDP  276 (372)
T ss_pred             HHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCC-C-------c----------hHHhcccCCCCCHHHHHHHHHhCCCCh
Confidence            999999888776554433332222222111000 0       0          000011123446789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRD  392 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~  392 (405)
                      ++|||+.|+|+||||++.
T Consensus       277 ~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         277 DKRISAADALAHPYLDEG  294 (372)
T ss_pred             hhCcCHHHHhcCHhhCCC
Confidence            999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=9.2e-42  Score=318.80  Aligned_cols=247  Identities=33%  Similarity=0.545  Sum_probs=182.8

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHH---hhcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRL---ARHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l---~~~~~~~~~------------  154 (405)
                      +|++.+.||+|+||+||+|+++.+++.||+|+++...   .......+|+.+++.+   .|+++....            
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            5999999999999999999999999999999986432   2223456788877776   577753210            


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++.              
T Consensus        81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~--------------  146 (288)
T cd07863          81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQ--------------  146 (288)
T ss_pred             eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--------------
Confidence                                 123688899999999999999999999999999999999976654              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                                   ++|+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|.+||.+....
T Consensus       147 -------------~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~  213 (288)
T cd07863         147 -------------VKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA  213 (288)
T ss_pred             -------------EEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH
Confidence                         556666655443222  12346889999999999889999999999999999999999999988888


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +.+..+....+......+...             ...+.....          .............++..+.+||.+||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~L~  270 (288)
T cd07863         214 DQLGKIFDLIGLPPEDDWPRD-------------VTLPRGAFS----------PRGPRPVQSVVPEIEESGAQLLLEMLT  270 (288)
T ss_pred             HHHHHHHHHhCCCChhhCccc-------------ccccccccC----------CCCCCchHHhCcCcCHHHHHHHHHHhc
Confidence            877777776654432211000             000000000          000011112223456788999999999


Q ss_pred             cCCCCCCCHHHHHcCCCC
Q 015532          372 YDPAERLKAREALRHPFF  389 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f  389 (405)
                      +||++|||+.|+++||||
T Consensus       271 ~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         271 FNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cCcccCCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2.7e-42  Score=327.98  Aligned_cols=218  Identities=26%  Similarity=0.407  Sum_probs=173.8

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +.||+|+||.||+|++..+++.||||+++...    .....+..|+.+++.+.|+++....                   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532    2234567899999999999874321                   


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..++.++.||+.||+|||++||+||||||+|||++.++.                           
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~---------------------------  133 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGH---------------------------  133 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC---------------------------
Confidence                    235688899999999999999999999999999999999976654                           


Q ss_pred             ceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 015532          227 IKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP  303 (405)
Q Consensus       227 ~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~  303 (405)
                      +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+..... 
T Consensus       134 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-  212 (323)
T cd05571         134 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-  212 (323)
T ss_pred             EEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-
Confidence            5566666554321   112335799999999999998999999999999999999999999987665444433321100 


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC-----
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-----  378 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp-----  378 (405)
                                                                       ..+...++++.+||.+||+.||++|+     
T Consensus       213 -------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~  243 (323)
T cd05571         213 -------------------------------------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPE  243 (323)
T ss_pred             -------------------------------------------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCC
Confidence                                                             01123467899999999999999999     


Q ss_pred             CHHHHHcCCCCCCC
Q 015532          379 KAREALRHPFFTRD  392 (405)
Q Consensus       379 ta~elL~hp~f~~~  392 (405)
                      ++.++++||||+..
T Consensus       244 ~~~~ll~h~~f~~~  257 (323)
T cd05571         244 DAKEIMEHRFFASI  257 (323)
T ss_pred             CHHHHHcCCCcCCC
Confidence            89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3.6e-41  Score=324.30  Aligned_cols=280  Identities=28%  Similarity=0.451  Sum_probs=209.6

Q ss_pred             CCceEeeCC---ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCC
Q 015532           80 GHYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT  153 (405)
Q Consensus        80 ~~~~~~~~~---~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~  153 (405)
                      |++++..|+   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.+.|+++...
T Consensus         1 ~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   80 (353)
T cd07850           1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGL   80 (353)
T ss_pred             CceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcce
Confidence            466777777   4678999999999999999999999999999999998642   2233456789999999999987432


Q ss_pred             c------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          154 R------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       154 ~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                      .                              ...+++..+..++.||+.||+|||++||+||||||+||+++.++.    
T Consensus        81 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~----  156 (353)
T cd07850          81 LNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----  156 (353)
T ss_pred             eeeeccCCCccccCcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC----
Confidence            1                              113677888899999999999999999999999999999976654    


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                                             ++|+|||++.......  ....++..|+|||++.+..++.++|||||||++|+|++|
T Consensus       157 -----------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g  213 (353)
T cd07850         157 -----------------------LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG  213 (353)
T ss_pred             -----------------------EEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHC
Confidence                                   5555555554332221  224678899999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ..||...+.......+...++.++..+..........+..........       ...........+..........+..
T Consensus       214 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  286 (353)
T cd07850         214 TVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGY-------SFEELFPDVLFPPDSESHNKLKASQ  286 (353)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCc-------chhhhCcccccCcccccccccchhH
Confidence            999999888888888888899888887766655554444332211100       0000000000111111112234667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +.+||.+||++||++|||+.|+|+||||+.+.
T Consensus       287 ~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~  318 (353)
T cd07850         287 ARDLLSKMLVIDPEKRISVDDALQHPYINVWY  318 (353)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcChhHhhcc
Confidence            89999999999999999999999999997543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.1e-41  Score=319.85  Aligned_cols=255  Identities=29%  Similarity=0.475  Sum_probs=193.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.++||+|+||.||+|++..+++.||||+++...  .....+.+|+++++++.|+++....               
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            57999999999999999999999999999999986432  2334567899999999999874321               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                       
T Consensus        86 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~-----------------------  142 (309)
T cd07872          86 LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGE-----------------------  142 (309)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-----------------------
Confidence                        123678889999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          ++|+|||++......   .....+|..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+.
T Consensus       143 ----~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  218 (309)
T cd07872         143 ----LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIF  218 (309)
T ss_pred             ----EEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence                556666655432211   1224678999999998764 58899999999999999999999999988888888888


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +.++.++...+..........     ....+.               ..+..........+.++++||.+||++||++|+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~  278 (309)
T cd07872         219 RLLGTPTEETWPGISSNDEFK-----NYNFPK---------------YKPQPLINHAPRLDTEGIELLTKFLQYESKKRI  278 (309)
T ss_pred             HHhCCCCHHHHhhhcchhhhh-----hhhcCc---------------cCCCchhhhccCCCHHHHHHHHHhccCChhhCC
Confidence            888877765443221110000     000000               000111112234577899999999999999999


Q ss_pred             CHHHHHcCCCCCCCC
Q 015532          379 KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ta~elL~hp~f~~~~  393 (405)
                      |+.|+|+||||+...
T Consensus       279 t~~e~l~h~~~~~~~  293 (309)
T cd07872         279 SAEEAMKHAYFRSLG  293 (309)
T ss_pred             CHHHHhcChhhhhcc
Confidence            999999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.5e-41  Score=321.99  Aligned_cols=255  Identities=27%  Similarity=0.467  Sum_probs=179.1

Q ss_pred             EeeeecccceeEEEEEec--CCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------------
Q 015532           97 LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------------  154 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------------  154 (405)
                      .++||+|+||+||+|+++  .+++.||+|.++... ......+|+.+++.+.|+++....                    
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            368999999999999975  467889999986533 234567899999999999984321                    


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+|||+...+                   
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~-------------------  145 (317)
T cd07868          85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG-------------------  145 (317)
T ss_pred             CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCC-------------------
Confidence                             01377888999999999999999999999999999999995421                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                          +.+..+||+|||++......      .....||+.|+|||++.+. .++.++||||+||++|+|++|.+||.....
T Consensus       146 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~  221 (317)
T cd07868         146 ----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  221 (317)
T ss_pred             ----CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcc
Confidence                13446788888887654322      1235789999999999874 588999999999999999999999975432


Q ss_pred             ---------HHHHHHHHHHhCCCChHHHHHhhHhhH--HhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          291 ---------LEHLAMMERVLGPLPHHMVIRADRRAE--KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       291 ---------~~~~~~i~~~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                               .+.+..+...+|.++...+........  ..........+              ................+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~  287 (317)
T cd07868         222 DIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTY--------------TNCSLIKYMEKHKVKPD  287 (317)
T ss_pred             cccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcccc--------------CcccccchHHhcCCCCC
Confidence                     345566667677655443322110000  00000000000              00000000111112234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcCCCC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      ..+.+||.+||++||++|+|++|+|+||||
T Consensus       288 ~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         288 SKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            578999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=8.6e-42  Score=318.87  Aligned_cols=228  Identities=24%  Similarity=0.348  Sum_probs=177.1

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|++.+.||+|+||.||+|.+..+++.||||++....    .....+.+|+.++..+.|+++....              
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            3889999999999999999999999999999986432    2234567899999999998762210              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++                     
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~---------------------  139 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG---------------------  139 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC---------------------
Confidence                           12478889999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            .++|+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.........+
T Consensus       140 ------~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~  213 (285)
T cd05631         140 ------HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEV  213 (285)
T ss_pred             ------CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHH
Confidence                  4566666666543221  12347899999999999989999999999999999999999999876543222222


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......                                              .........+.++.+||.+||+.||++|
T Consensus       214 ~~~~~~----------------------------------------------~~~~~~~~~s~~~~~li~~~l~~~P~~R  247 (285)
T cd05631         214 DRRVKE----------------------------------------------DQEEYSEKFSEDAKSICRMLLTKNPKER  247 (285)
T ss_pred             HHHhhc----------------------------------------------ccccCCccCCHHHHHHHHHHhhcCHHHh
Confidence            111100                                              0011223457789999999999999999


Q ss_pred             CC-----HHHHHcCCCCCCCC
Q 015532          378 LK-----AREALRHPFFTRDV  393 (405)
Q Consensus       378 pt-----a~elL~hp~f~~~~  393 (405)
                      +|     ++++++||||++..
T Consensus       248 ~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         248 LGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             cCCCCCCHHHHhcCHhhcCCC
Confidence            97     99999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=6.9e-42  Score=327.13  Aligned_cols=225  Identities=24%  Similarity=0.361  Sum_probs=181.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCC-cEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~-~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.|++.+.||+|+||.||+|.+..++ ..||+|++....    ...+.+.+|+.+++.+.|+++....           
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            357999999999999999999876654 689999986432    2345677899999999999884321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++                    
T Consensus       109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--------------------  168 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--------------------  168 (340)
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--------------------
Confidence                            23578889999999999999999999999999999999997655                    


Q ss_pred             cCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                             .++|+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+.
T Consensus       169 -------~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~  241 (340)
T PTZ00426        169 -------FIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKIL  241 (340)
T ss_pred             -------CEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence                   4667777776655444445689999999999999889999999999999999999999998876655444432


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .....                                                  .+...++.+.++|++||+.||++|+
T Consensus       242 ~~~~~--------------------------------------------------~p~~~~~~~~~li~~~l~~dp~~R~  271 (340)
T PTZ00426        242 EGIIY--------------------------------------------------FPKFLDNNCKHLMKKLLSHDLTKRY  271 (340)
T ss_pred             cCCCC--------------------------------------------------CCCCCCHHHHHHHHHHcccCHHHcC
Confidence            21111                                                  1123466889999999999999996


Q ss_pred             -----CHHHHHcCCCCCCC
Q 015532          379 -----KAREALRHPFFTRD  392 (405)
Q Consensus       379 -----ta~elL~hp~f~~~  392 (405)
                           |++++++||||.+.
T Consensus       272 ~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        272 GNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             CCCCCCHHHHHcCCCcCCC
Confidence                 89999999999864

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.5e-41  Score=330.32  Aligned_cols=253  Identities=25%  Similarity=0.318  Sum_probs=174.0

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ..+|.+.+.||+|+||.||+|.+..+++.||||....     ....+|+++|++|.|++++...                
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            4579999999999999999999999999999996432     2356799999999999984322                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                        
T Consensus       243 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~------------------------  298 (461)
T PHA03211        243 RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPED------------------------  298 (461)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCC------------------------
Confidence                       134788999999999999999999999999999999999976654                        


Q ss_pred             CCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-------hH
Q 015532          224 SSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE-------NL  291 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~-------~~  291 (405)
                         ++|+|||++......     .....||..|+|||++.+..++.++|||||||++|||++|..++....       ..
T Consensus       299 ---vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~  375 (461)
T PHA03211        299 ---ICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD  375 (461)
T ss_pred             ---EEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH
Confidence               455555555432211     112469999999999999899999999999999999999876543211       12


Q ss_pred             HHHHHHHHHhCCCChHHHHHh-hHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          292 EHLAMMERVLGPLPHHMVIRA-DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      ..+..+.+..+.....+.... ......+........                ........+......+..+.+||.+||
T Consensus       376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~dli~~mL  439 (461)
T PHA03211        376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNR----------------RPAYTRPAWTRYYKLDLDVEYLVCRAL  439 (461)
T ss_pred             HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhccc----------------CCccCCcchhhhccccchHHHHHHHHc
Confidence            233333332221110000000 000000000000000                000000011111234567899999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~~  391 (405)
                      ++||++|||+.|+|+||||+.
T Consensus       440 ~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        440 TFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             ccChhhCcCHHHHhhCcccCC
Confidence            999999999999999999975

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=3.6e-42  Score=303.92  Aligned_cols=262  Identities=31%  Similarity=0.545  Sum_probs=199.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC----cEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~----~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..|++++.||+|.||.||+|..+.++    +.+|||.++...   .....+.+|+.+++.+.|+|++...          
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            46999999999999999999765543    378999996542   3345678999999999999973211          


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...++...++.++.||+.|+.|||++-|+||||||.|||+..+|              
T Consensus       104 ~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg--------------  169 (438)
T KOG0666|consen  104 WLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG--------------  169 (438)
T ss_pred             EEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC--------------
Confidence                                  24577889999999999999999999999999999999998765              


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                               ++.+.|||+|||+++......      ..++-|.+|+|||++.|. .|+.+.||||+|||+.||+|-++.|
T Consensus       170 ---------perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF  240 (438)
T KOG0666|consen  170 ---------PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLF  240 (438)
T ss_pred             ---------CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccc
Confidence                     457789999999998765443      236789999999999987 4999999999999999999999999


Q ss_pred             CCCC---------hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhh---HHHHHHhcc----chh
Q 015532          286 QTHE---------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS---MRAVWKLLR----LPN  349 (405)
Q Consensus       286 ~~~~---------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~  349 (405)
                      .+..         ..+++.+|.+++|.+...                   +||.-..-++.   +........    +.+
T Consensus       241 ~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~-------------------~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~  301 (438)
T KOG0666|consen  241 KGREEKIKTKNPFQHDQLDRIFEVLGTPTDK-------------------DWPDLKKMPEYQTLLSDFRRHYYDNVSLHK  301 (438)
T ss_pred             cchhhhcccCCCchHHHHHHHHHHcCCCccc-------------------cchhhhhCcchHHHHHHhHHhhcCcchHHH
Confidence            7642         246788888999887543                   23332222211   111110100    111


Q ss_pred             hhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       350 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      .. +.....++...+||.+||++||-+|.|++|+|+|+||+.....|
T Consensus       302 ~~-~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lpp  347 (438)
T KOG0666|consen  302 YY-HKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLPP  347 (438)
T ss_pred             HH-HHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCCC
Confidence            11 11122345688999999999999999999999999999986654

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.9e-43  Score=303.83  Aligned_cols=226  Identities=31%  Similarity=0.472  Sum_probs=180.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc---------hhhhhHHHHHHHHHHHHHhhcC-CCCC--------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---------INKYREAAMIEIDVLQRLARHD-IGGT--------  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~---------~~~~~~~~~~E~~il~~l~~~~-~~~~--------  153 (405)
                      .+|.-.+.||.|..++|.+|.++.+++.+|+|++..         ....++....|+.||+++..|. |+..        
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            568888999999999999999999999999999842         1234567778999999986554 4211        


Q ss_pred             -------------c------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          154 -------------R------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       154 -------------~------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                   +      .-.+++...+.+++|++.|++|||.++||||||||+|||+++                  
T Consensus        97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd------------------  158 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD------------------  158 (411)
T ss_pred             hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc------------------
Confidence                         1      124688999999999999999999999999999999999864                  


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhC------CCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG------LGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                               +.+++|+|||++.......  ...||||+|+|||.+..      .+|+..+|+||+|||+|.|+.|.+||.
T Consensus       159 ---------n~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw  229 (411)
T KOG0599|consen  159 ---------NMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW  229 (411)
T ss_pred             ---------ccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence                     4567888888887665544  34799999999999864      358889999999999999999999997


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      .....-.+.+|.+.-                        ..+                      ....+.+++...+|||
T Consensus       230 HRkQmlMLR~ImeGk------------------------yqF----------------------~speWadis~~~KdLI  263 (411)
T KOG0599|consen  230 HRKQMLMLRMIMEGK------------------------YQF----------------------RSPEWADISATVKDLI  263 (411)
T ss_pred             HHHHHHHHHHHHhcc------------------------ccc----------------------CCcchhhccccHHHHH
Confidence            655544444443311                        010                      1122356678899999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                      .+||++||.+|.|++|+|+||||.
T Consensus       264 srlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  264 SRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             HHHHeeCchhcccHHHHhcChHHH
Confidence            999999999999999999999994

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-41  Score=322.38  Aligned_cols=232  Identities=28%  Similarity=0.393  Sum_probs=184.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...    .....+..|+.++..+.|+++....             
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36999999999999999999999999999999997532    2335577899999999999874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++                      
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~----------------------  138 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG----------------------  138 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC----------------------
Confidence                          23468889999999999999999999999999999999997654                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus       139 -----~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  213 (333)
T cd05600         139 -----HIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW  213 (333)
T ss_pred             -----CEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc
Confidence                 467777777765544444568999999999999989999999999999999999999999887766555444321


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      ...+                      ..+..                    .......++++.+||.+||..+|++|+|+
T Consensus       214 ~~~~----------------------~~~~~--------------------~~~~~~~s~~~~~li~~~l~~~~~rr~s~  251 (333)
T cd05600         214 KETL----------------------QRPVY--------------------DDPRFNLSDEAWDLITKLINDPSRRFGSL  251 (333)
T ss_pred             cccc----------------------cCCCC--------------------CccccccCHHHHHHHHHHhhChhhhcCCH
Confidence            1000                      00000                    00002346789999999999999999999


Q ss_pred             HHHHcCCCCCCC
Q 015532          381 REALRHPFFTRD  392 (405)
Q Consensus       381 ~elL~hp~f~~~  392 (405)
                      +++++||||...
T Consensus       252 ~~ll~h~~~~~~  263 (333)
T cd05600         252 EDIKNHPFFKEV  263 (333)
T ss_pred             HHHHhCcccCCC
Confidence            999999999874

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=3.7e-41  Score=320.40  Aligned_cols=223  Identities=26%  Similarity=0.370  Sum_probs=177.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+..|+.++..+.|+++....              
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4899999999999999999999999999999997532    2345677899999999887642111              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                     
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~---------------------  139 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH---------------------  139 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC---------------------
Confidence                          134688899999999999999999999999999999999977654                     


Q ss_pred             CCCCCCceeccCCCCccc---cCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            ++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+
T Consensus       140 ------~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i  213 (324)
T cd05587         140 ------IKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSI  213 (324)
T ss_pred             ------EEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                  555566655321   11122357999999999999989999999999999999999999999887766555444


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......                                                  .+...+.++.+||.+||..||++|
T Consensus       214 ~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~~P~~R  243 (324)
T cd05587         214 MEHNVS--------------------------------------------------YPKSLSKEAVSICKGLLTKHPAKR  243 (324)
T ss_pred             HcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhhcCHHHc
Confidence            321111                                                  112346688999999999999999


Q ss_pred             CCH-----HHHHcCCCCCCC
Q 015532          378 LKA-----REALRHPFFTRD  392 (405)
Q Consensus       378 pta-----~elL~hp~f~~~  392 (405)
                      +++     +++++||||+..
T Consensus       244 ~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         244 LGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             CCCCCCCHHHHhcCCCcCCC
Confidence            976     899999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=7.6e-41  Score=323.16  Aligned_cols=253  Identities=23%  Similarity=0.278  Sum_probs=184.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.||||++++..    .....+..|+.++..+.|+++....             
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            36999999999999999999999999999999997532    2234567899999999998874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++............
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence                          245788999999999999999999999999999999999999999999999987644321110000


Q ss_pred             CCCCCCceeccCCCCccc------------cCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          221 LPKSSAIKLIDFGSTTFE------------HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                       .........|+......            .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         161 -RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             -ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence             00000011122111100            00112357999999999999999999999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      +..+....+......                      ..+|.                        ....++++++||.+
T Consensus       240 ~~~~~~~~i~~~~~~----------------------~~~p~------------------------~~~~s~~~~~li~~  273 (363)
T cd05628         240 TPQETYKKVMNWKET----------------------LIFPP------------------------EVPISEKAKDLILR  273 (363)
T ss_pred             CHHHHHHHHHcCcCc----------------------ccCCC------------------------cCCCCHHHHHHHHH
Confidence            766655544321110                      00000                        01246688999999


Q ss_pred             ccccCCCC---CCCHHHHHcCCCCCCC
Q 015532          369 LLRYDPAE---RLKAREALRHPFFTRD  392 (405)
Q Consensus       369 ~L~~dP~~---Rpta~elL~hp~f~~~  392 (405)
                      |+. +|++   ||+++|+++||||++.
T Consensus       274 l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         274 FCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             HcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            775 5554   5899999999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.7e-41  Score=320.80  Aligned_cols=218  Identities=27%  Similarity=0.414  Sum_probs=173.3

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +.||+|+||.||+|++..+++.||||+++...    .....+.+|+.+++.+.|+++....                   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532    2335667899999999999874321                   


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.                           
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~---------------------------  133 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGH---------------------------  133 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCc---------------------------
Confidence                    235788899999999999999999999999999999999976654                           


Q ss_pred             ceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 015532          227 IKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP  303 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~  303 (405)
                      +||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+..... 
T Consensus       134 ~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-  212 (328)
T cd05593         134 IKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI-  212 (328)
T ss_pred             EEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc-
Confidence            56666665543211   11235799999999999988999999999999999999999999987665544333211100 


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC-----
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-----  378 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp-----  378 (405)
                                                                       ..+...+.++.+||.+||+.||++|+     
T Consensus       213 -------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~  243 (328)
T cd05593         213 -------------------------------------------------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPD  243 (328)
T ss_pred             -------------------------------------------------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCC
Confidence                                                             11123467899999999999999997     


Q ss_pred             CHHHHHcCCCCCCC
Q 015532          379 KAREALRHPFFTRD  392 (405)
Q Consensus       379 ta~elL~hp~f~~~  392 (405)
                      ++.|+++||||...
T Consensus       244 ~~~~il~h~~~~~~  257 (328)
T cd05593         244 DAKEIMRHSFFTGV  257 (328)
T ss_pred             CHHHHhcCCCcCCC
Confidence            89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-41  Score=318.55  Aligned_cols=216  Identities=31%  Similarity=0.475  Sum_probs=172.1

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      ||+|+||.||+|++..+++.||+|+++...    .....+..|+.+++.+.|+++....                     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999999999999999996432    2335567899999999999874321                     


Q ss_pred             ------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          155 ------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       155 ------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                            ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                           ++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~---------------------------~k  133 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGH---------------------------IA  133 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCc---------------------------EE
Confidence                  235788899999999999999999999999999999999976554                           56


Q ss_pred             eccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 015532          229 LIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP  305 (405)
Q Consensus       229 l~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p  305 (405)
                      |+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+....    
T Consensus       134 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~----  209 (312)
T cd05585         134 LCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP----  209 (312)
T ss_pred             EEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC----
Confidence            666666543211   1223579999999999999899999999999999999999999998766554443322110    


Q ss_pred             hHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC---CHHH
Q 015532          306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL---KARE  382 (405)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp---ta~e  382 (405)
                                          .                          ..+...++.+.+||.+||+.||++|+   ++.|
T Consensus       210 --------------------~--------------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e  243 (312)
T cd05585         210 --------------------L--------------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQE  243 (312)
T ss_pred             --------------------C--------------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHH
Confidence                                0                          11123467899999999999999997   5899


Q ss_pred             HHcCCCCCCC
Q 015532          383 ALRHPFFTRD  392 (405)
Q Consensus       383 lL~hp~f~~~  392 (405)
                      +|+||||++.
T Consensus       244 ~l~hp~~~~~  253 (312)
T cd05585         244 IKNHPFFSQL  253 (312)
T ss_pred             HHcCCCcCCC
Confidence            9999999975

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-41  Score=323.87  Aligned_cols=254  Identities=24%  Similarity=0.360  Sum_probs=186.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...    .....+.+|+.+++.+.|+++....             
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            36999999999999999999999999999999997532    2334567899999999999874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc--
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF--  218 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~--  218 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||++..........  
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence                          2357899999999999999999999999999999999999999999999999876543221100  


Q ss_pred             cCCCCCCCceeccCCCCccccC------------CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQ------------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                      .........-..++........            .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence            0000000000011111100000            1112479999999999999899999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +.+..+....+.....                      ....+                        .....++++.+||
T Consensus       241 ~~~~~~~~~~i~~~~~----------------------~~~~~------------------------~~~~~s~~~~~li  274 (364)
T cd05599         241 SDNPQETYRKIINWKE----------------------TLQFP------------------------DEVPLSPEAKDLI  274 (364)
T ss_pred             CCCHHHHHHHHHcCCC----------------------ccCCC------------------------CCCCCCHHHHHHH
Confidence            8776554433321100                      00000                        0113467889999


Q ss_pred             HHccccCCCCCCC---HHHHHcCCCCCCC
Q 015532          367 QGLLRYDPAERLK---AREALRHPFFTRD  392 (405)
Q Consensus       367 ~~~L~~dP~~Rpt---a~elL~hp~f~~~  392 (405)
                      .+||. +|.+|++   ++|+++||||+..
T Consensus       275 ~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         275 KRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            99997 9999998   9999999999875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-41  Score=322.41  Aligned_cols=254  Identities=26%  Similarity=0.376  Sum_probs=185.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...    .....+..|+.++..+.|+++....             
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46999999999999999999999999999999997532    2345677899999999998874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||++............
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence                          135788999999999999999999999999999999999999888888888876544322211000


Q ss_pred             CCCCCCce-eccCC----CCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          221 LPKSSAIK-LIDFG----STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       221 ~~~~~~~k-l~Dfg----~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                      ........ .....    .............||+.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~  240 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN  240 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH
Confidence            00000000 00000    00000011123579999999999999999999999999999999999999998877655444


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+......                      ...+                        ....+++.+.+||.+||. ||+
T Consensus       241 ~i~~~~~~----------------------~~~p------------------------~~~~~~~~~~~li~~ll~-dp~  273 (350)
T cd05573         241 KIINWKES----------------------LRFP------------------------PDPPVSPEAIDLICRLLC-DPE  273 (350)
T ss_pred             HHhccCCc----------------------ccCC------------------------CCCCCCHHHHHHHHHHcc-Chh
Confidence            43321100                      0000                        011246789999999998 999


Q ss_pred             CCCC-HHHHHcCCCCCCC
Q 015532          376 ERLK-AREALRHPFFTRD  392 (405)
Q Consensus       376 ~Rpt-a~elL~hp~f~~~  392 (405)
                      +|++ ++++++||||+..
T Consensus       274 ~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         274 DRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             hcCCCHHHHhcCCCcCCC
Confidence            9999 9999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.3e-40  Score=323.66  Aligned_cols=254  Identities=24%  Similarity=0.331  Sum_probs=182.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|++++.||+|+||+||+|++..+++.||||+++...    ...+.+..|+.+++.+.|+++....              
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5899999999999999999999999999999996532    2345577899999999999874321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc--cc
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY--FK  219 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~--~~  219 (405)
                                   ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++.........  ..
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence                         235788899999999999999999999999999999999999999999999986532111000  00


Q ss_pred             C------CCCC-----CCceeccCCCC-------cc---ccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          220 N------LPKS-----SAIKLIDFGST-------TF---EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       220 ~------~~~~-----~~~kl~Dfg~a-------~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                      .      ....     .....+.++..       ..   ........+||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el  241 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM  241 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence            0      0000     00001111100       00   00011235799999999999998999999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCc
Q 015532          279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  358 (405)
Q Consensus       279 ltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (405)
                      ++|..||...+..+....+......                      ..+                        .....+
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~~~------------------------~~~~~~  275 (381)
T cd05626         242 LVGQPPFLAPTPTETQLKVINWENT----------------------LHI------------------------PPQVKL  275 (381)
T ss_pred             HhCCCCCcCCCHHHHHHHHHccccc----------------------cCC------------------------CCCCCC
Confidence            9999999877655443333211000                      000                        011235


Q ss_pred             hHHHHHHHHHcccc--CCCCCCCHHHHHcCCCCCCC
Q 015532          359 AGDLIDLLQGLLRY--DPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       359 ~~~l~~ll~~~L~~--dP~~Rpta~elL~hp~f~~~  392 (405)
                      ++++++||.+||..  ++..|++++++++||||++.
T Consensus       276 s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         276 SPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             CHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            67899999996654  44559999999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-41  Score=296.84  Aligned_cols=243  Identities=28%  Similarity=0.453  Sum_probs=188.8

Q ss_pred             cCCCeEEE-eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh-hcCCCCC--------------
Q 015532           90 LTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGT--------------  153 (405)
Q Consensus        90 ~~~~y~~~-~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~-~~~~~~~--------------  153 (405)
                      +++.|.+- ++||-|-.|.|..|.++.|++.+|+|++....+    +.+|+++.-..+ |++++..              
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK----ARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHH----HHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            55667774 689999999999999999999999999875444    456777655544 4444211              


Q ss_pred             -----------c--------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          154 -----------R--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       154 -----------~--------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                 +        ...|+|.++..|++||..|+.|||+.+|.||||||+|+|+...+                
T Consensus       135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~----------------  198 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS----------------  198 (400)
T ss_pred             EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC----------------
Confidence                       0        24589999999999999999999999999999999999997654                


Q ss_pred             CCcccCCCCCCCceeccCCCCcccc--CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                              .+..+||+|||+|+...  ....+.+-|++|.|||++....|+..+|+||+||++|.|++|.+||.......
T Consensus       199 --------~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a  270 (400)
T KOG0604|consen  199 --------PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA  270 (400)
T ss_pred             --------CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc
Confidence                    56679999999998766  33455788999999999998899999999999999999999999997654321


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      +           ++.|..+.         ..+...+|+                      +.|+.+|+..+|+|+++|..
T Consensus       271 i-----------spgMk~rI---------~~gqy~FP~----------------------pEWs~VSe~aKdlIR~LLkt  308 (400)
T KOG0604|consen  271 I-----------SPGMKRRI---------RTGQYEFPE----------------------PEWSCVSEAAKDLIRKLLKT  308 (400)
T ss_pred             C-----------ChhHHhHh---------hccCccCCC----------------------hhHhHHHHHHHHHHHHHhcC
Confidence            1           11111110         011122222                      23345688999999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCCCCCcchhcc
Q 015532          373 DPAERLKAREALRHPFFTRDVRRPTLLVAT  402 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~~~~~~~~~~  402 (405)
                      +|.+|.|++|+++|||+.+...-|...+.|
T Consensus       309 ~PteRlTI~~~m~hpwi~~~~~vp~tpl~t  338 (400)
T KOG0604|consen  309 EPTERLTIEEVMDHPWINQYEAVPQTPLST  338 (400)
T ss_pred             CchhheeHHHhhcCchhcccccCCCCCchh
Confidence            999999999999999999987766655544

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1e-40  Score=324.56  Aligned_cols=254  Identities=27%  Similarity=0.368  Sum_probs=184.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +|+++++||+|+||+||+|++..+++.||||++....    .....+.+|+.+++.+.|++++...              
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5999999999999999999999999999999997532    2345677899999999999874321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc-ccC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY-FKN  220 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~-~~~  220 (405)
                                   ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......... ...
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~  161 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence                         134688899999999999999999999999999999999999999999999986432211000 000


Q ss_pred             CCCCCCceeccCCC---------------------Ccc-ccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGS---------------------TTF-EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~---------------------a~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                      ..........+|..                     ... ........+||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el  241 (382)
T cd05625         162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  241 (382)
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence            00000000001100                     000 00011235799999999999998999999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCc
Q 015532          279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  358 (405)
Q Consensus       279 ltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (405)
                      ++|.+||.+.+..+....+......                      ...                        ......
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~~~------------------------p~~~~~  275 (382)
T cd05625         242 LVGQPPFLAQTPLETQMKVINWQTS----------------------LHI------------------------PPQAKL  275 (382)
T ss_pred             HhCCCCCCCCCHHHHHHHHHccCCC----------------------cCC------------------------CCcccC
Confidence            9999999887765544433221100                      000                        011235


Q ss_pred             hHHHHHHHHHccccCCCCCCC---HHHHHcCCCCCCCC
Q 015532          359 AGDLIDLLQGLLRYDPAERLK---AREALRHPFFTRDV  393 (405)
Q Consensus       359 ~~~l~~ll~~~L~~dP~~Rpt---a~elL~hp~f~~~~  393 (405)
                      ++++.+||.+|+ .||++|++   ++++++||||+...
T Consensus       276 s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         276 SPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             CHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence            678899999987 59999997   99999999998743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=2.1e-40  Score=315.24  Aligned_cols=222  Identities=24%  Similarity=0.372  Sum_probs=174.2

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHH---HHHhhcCCCCCc------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVL---QRLARHDIGGTR------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il---~~l~~~~~~~~~------------  154 (405)
                      |++++.||+|+||.||+|.+..+++.||||+++...    ...+.+..|+.++   +.+.|+++....            
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            788999999999999999999999999999997532    2234455666655   456688773321            


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                     
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~---------------------  139 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGF---------------------  139 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCc---------------------
Confidence                          235789999999999999999999999999999999999987664                     


Q ss_pred             CCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+
T Consensus       140 ------~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i  213 (324)
T cd05589         140 ------VKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI  213 (324)
T ss_pred             ------EEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                  4555555543211   1123457999999999999989999999999999999999999999887766555443


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......                                                  .+..++..+.+||.+||+.||++|
T Consensus       214 ~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~R  243 (324)
T cd05589         214 VNDEVR--------------------------------------------------YPRFLSREAISIMRRLLRRNPERR  243 (324)
T ss_pred             HhCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhhcCHhHc
Confidence            221111                                                  112346688999999999999999


Q ss_pred             C-----CHHHHHcCCCCCCC
Q 015532          378 L-----KAREALRHPFFTRD  392 (405)
Q Consensus       378 p-----ta~elL~hp~f~~~  392 (405)
                      |     ++.++++||||+..
T Consensus       244 ~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         244 LGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             CCCCCCCHHHHhhCCCcCCC
Confidence            9     79999999999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=8.9e-41  Score=317.56  Aligned_cols=219  Identities=25%  Similarity=0.391  Sum_probs=172.8

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +.||+|+||.||+|++..+++.||+|+++...    .....+..|+.+++.+.|+++....                   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532    2234566799999999999884321                   


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|                         
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k-------------------------  135 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK-------------------------  135 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEE-------------------------
Confidence                    13478899999999999999999999999999999999998766554                         


Q ss_pred             ceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 015532          227 IKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP  303 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~  303 (405)
                        |+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+..... 
T Consensus       136 --L~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-  212 (323)
T cd05595         136 --ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-  212 (323)
T ss_pred             --ecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-
Confidence              455554432111   11234689999999999988999999999999999999999999987665544433321100 


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC-----
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-----  378 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp-----  378 (405)
                                                                       ..+..+++++.+||.+||+.||++|+     
T Consensus       213 -------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~  243 (323)
T cd05595         213 -------------------------------------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPS  243 (323)
T ss_pred             -------------------------------------------------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCC
Confidence                                                             01123467899999999999999998     


Q ss_pred             CHHHHHcCCCCCCCC
Q 015532          379 KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ta~elL~hp~f~~~~  393 (405)
                      ++.++++||||.+..
T Consensus       244 ~~~~~l~h~~~~~~~  258 (323)
T cd05595         244 DAKEVMEHRFFLSIN  258 (323)
T ss_pred             CHHHHHcCCCcCCCC
Confidence            999999999998743

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.5e-40  Score=316.09  Aligned_cols=223  Identities=25%  Similarity=0.360  Sum_probs=175.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|++.+.||+|+||.||+|++..+++.||||++++..    ...+....|..++..+.++++....              
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            3889999999999999999999999999999997532    2234456788888887665542110              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                     
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~---------------------  139 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH---------------------  139 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCc---------------------
Confidence                          235788899999999999999999999999999999999977664                     


Q ss_pred             CCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+
T Consensus       140 ------~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i  213 (323)
T cd05616         140 ------IKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI  213 (323)
T ss_pred             ------EEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                  5556666554321   1122357999999999999999999999999999999999999999987766655544


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .......                                                  +...+.++.+|+.+||+.||++|
T Consensus       214 ~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~l~~~p~~R  243 (323)
T cd05616         214 MEHNVAY--------------------------------------------------PKSMSKEAVAICKGLMTKHPGKR  243 (323)
T ss_pred             HhCCCCC--------------------------------------------------CCcCCHHHHHHHHHHcccCHHhc
Confidence            3321111                                                  12346688999999999999999


Q ss_pred             CC-----HHHHHcCCCCCCC
Q 015532          378 LK-----AREALRHPFFTRD  392 (405)
Q Consensus       378 pt-----a~elL~hp~f~~~  392 (405)
                      ++     ..++++||||+.-
T Consensus       244 ~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         244 LGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             CCCCCCCHHHHhcCCCcCCC
Confidence            97     4899999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.8e-40  Score=314.34  Aligned_cols=274  Identities=23%  Similarity=0.287  Sum_probs=183.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++.+.||+|+||.||+|++..++..||+|+++..  ....+.+.+|+++++.+.|+++....              
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            46899999999999999999999999999999998643  23456788999999999999884321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                   ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.                     
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~---------------------  142 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE---------------------  142 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCc---------------------
Confidence                         13467888999999999999999985 6999999999999987664                     


Q ss_pred             CCCCCCceeccCCCCccccC-CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                            ++|+|||++..... ......||..|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+..
T Consensus       143 ------~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~  216 (331)
T cd06649         143 ------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGR  216 (331)
T ss_pred             ------EEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc
Confidence                  45555555543322 12234789999999999998899999999999999999999999987655443222211


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCC--CchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA--TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ..............    ...............  .........................+++++++||.+||++||++|
T Consensus       217 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~R  292 (331)
T cd06649         217 PVVDGEEGEPHSIS----PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAER  292 (331)
T ss_pred             cccccccCCccccC----cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccC
Confidence            00000000000000    000000000000000  000000000000000000001112357789999999999999999


Q ss_pred             CCHHHHHcCCCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDVRR  395 (405)
Q Consensus       378 pta~elL~hp~f~~~~~~  395 (405)
                      ||++|+|+||||+.....
T Consensus       293 pt~~ell~h~~~~~~~~~  310 (331)
T cd06649         293 ADLKMLMNHTFIKRSEVE  310 (331)
T ss_pred             CCHHHHhcChHHhhcccc
Confidence            999999999999876443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.7e-40  Score=319.62  Aligned_cols=257  Identities=25%  Similarity=0.360  Sum_probs=185.3

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEec--CCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..+..+|++++.||+|+||.||+|...  .+++.||+|.+...    ....+|+++|+.+.|+++....           
T Consensus        88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             hhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence            345678999999999999999999764  35678999988643    2345799999999999885421           


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.                    
T Consensus       164 v~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~--------------------  223 (392)
T PHA03207        164 VMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPEN--------------------  223 (392)
T ss_pred             EehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC--------------------
Confidence                           245788899999999999999999999999999999999976664                    


Q ss_pred             CCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---hH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE---NL  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~---~~  291 (405)
                             ++|+|||++......     .....||+.|+|||++.+..|+.++|||||||++|+|++|..||.+..   ..
T Consensus       224 -------~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~  296 (392)
T PHA03207        224 -------AVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSS  296 (392)
T ss_pred             -------EEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcH
Confidence                   455555555432211     123579999999999999899999999999999999999999997654   34


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcC---CcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRG---ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ..+..+.+.++..|..+...........+...   .+..+.                 .+...  .....+.++.+||.+
T Consensus       297 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~~~~~~li~~  357 (392)
T PHA03207        297 SQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYT-----------------IPPVI--RKYGMHMDVEYLIAK  357 (392)
T ss_pred             HHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcc-----------------ccchh--hccCcchhHHHHHHH
Confidence            55566666666544332211111111111000   000000                 00000  011335678999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      ||++||++|||+.|+|+||||+....
T Consensus       358 ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        358 MLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             HhccChhhCCCHHHHhhCchhhccch
Confidence            99999999999999999999988544

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-40  Score=323.09  Aligned_cols=252  Identities=24%  Similarity=0.376  Sum_probs=184.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|+++++||+|+||+||+|++..+++.||||++.+..    ...+.+.+|+++++.+.|+++....             
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            36999999999999999999999999999999986532    2235567899999999999874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc--c
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY--F  218 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~--~  218 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++.........  .
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence                          245788899999999999999999999999999999999999999999999987543221100  0


Q ss_pred             cC----------CCCCCCc-------------eeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHH
Q 015532          219 KN----------LPKSSAI-------------KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  275 (405)
Q Consensus       219 ~~----------~~~~~~~-------------kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  275 (405)
                      ..          .+....+             ++.+++.....  .....+||+.|+|||++.+..++.++|||||||++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  238 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL--MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM  238 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccc--cccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence            00          0000000             01111111000  01124799999999999998999999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcc
Q 015532          276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  355 (405)
Q Consensus       276 ~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
                      |||++|.+||.+.+..+.+..+.....                      ...++.                        .
T Consensus       239 ~elltG~~Pf~~~~~~~~~~~i~~~~~----------------------~~~~p~------------------------~  272 (377)
T cd05629         239 FECLIGWPPFCSENSHETYRKIINWRE----------------------TLYFPD------------------------D  272 (377)
T ss_pred             hhhhcCCCCCCCCCHHHHHHHHHccCC----------------------ccCCCC------------------------C
Confidence            999999999988776555444322100                      001110                        1


Q ss_pred             cCchHHHHHHHHHccccCCCCC---CCHHHHHcCCCCCCC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAER---LKAREALRHPFFTRD  392 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~R---pta~elL~hp~f~~~  392 (405)
                      ...+.++.+||.+||. +|.+|   +|+.|+++||||++.
T Consensus       273 ~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         273 IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            1346789999999998 77776   599999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.8e-40  Score=308.39  Aligned_cols=255  Identities=29%  Similarity=0.469  Sum_probs=189.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.++||+|+||.||+|++..+++.||+|.++...  .....+.+|+.+++.+.|+++....               
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            57999999999999999999999999999999986432  2334567899999999999874321               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.                       
T Consensus        86 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~-----------------------  142 (301)
T cd07873          86 LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGE-----------------------  142 (301)
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCc-----------------------
Confidence                        134678889999999999999999999999999999999977664                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          ++|+|||++......   .....+++.|+|||++.+. .++.++|||||||++|+|++|.+||...+..+.+..+.
T Consensus       143 ----~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~  218 (301)
T cd07873         143 ----LKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIF  218 (301)
T ss_pred             ----EEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                455555554432211   1123568899999998764 47889999999999999999999999988888887777


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +.++.++...+........ +    ....++.               .............++.+.+||.+||+.||++||
T Consensus       219 ~~~~~~~~~~~~~~~~~~~-~----~~~~~~~---------------~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~  278 (301)
T cd07873         219 RILGTPTEETWPGILSNEE-F----KSYNYPK---------------YRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI  278 (301)
T ss_pred             HHcCCCChhhchhhhcccc-c----cccccCc---------------cccccHHhhcCCCCHHHHHHHHHHhcCCcccCc
Confidence            7777665443221100000 0    0000000               000011112234577899999999999999999


Q ss_pred             CHHHHHcCCCCCCCC
Q 015532          379 KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ta~elL~hp~f~~~~  393 (405)
                      |++|+|+||||+.-.
T Consensus       279 t~~eil~h~~f~~~~  293 (301)
T cd07873         279 SAEEAMKHPYFHCLG  293 (301)
T ss_pred             CHHHHhcCccccccc
Confidence            999999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.2e-40  Score=323.41  Aligned_cols=252  Identities=25%  Similarity=0.356  Sum_probs=182.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|++++.||+|+||.||+|++..+++.||||++.+..    .....+.+|+.+|+.+.|+++....              
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            6999999999999999999999999999999996532    2345577899999999999874321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC--CCccc
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD--GSYFK  219 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~--~~~~~  219 (405)
                                   ...+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++......  .....
T Consensus        82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~  161 (376)
T cd05598          82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (376)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence                         234678889999999999999999999999999999999999999999999986432110  00000


Q ss_pred             CCCCCCCceeccCCCC---------------c---cccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          220 NLPKSSAIKLIDFGST---------------T---FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a---------------~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                      .. ........+....               .   .........+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G  240 (376)
T cd05598         162 KG-DHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG  240 (376)
T ss_pred             cc-cccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence            00 0000000000000               0   000011235799999999999998999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ..||.+.+..+....+......                      ..                        ......++..
T Consensus       241 ~~Pf~~~~~~~~~~~i~~~~~~----------------------~~------------------------~~~~~~~s~~  274 (376)
T cd05598         241 QPPFLADTPAETQLKVINWETT----------------------LH------------------------IPSQAKLSRE  274 (376)
T ss_pred             CCCCCCCCHHHHHHHHhccCcc----------------------cc------------------------CCCCCCCCHH
Confidence            9999887665544332211000                      00                        0011235678


Q ss_pred             HHHHHHHccccCCCCCC---CHHHHHcCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERL---KAREALRHPFFTRD  392 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rp---ta~elL~hp~f~~~  392 (405)
                      +.+||.+|+ .+|++|+   |+.|+++||||++.
T Consensus       275 ~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         275 ASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             HHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            899999977 5999999   99999999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-41  Score=309.94  Aligned_cols=230  Identities=26%  Similarity=0.397  Sum_probs=192.0

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++..||++.+.||+|.||.|-+|.+...|+.||||.|++...    ..-...+||+||..|+|++|+...          
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            456789999999999999999999999999999999976543    223456899999999999984322          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       .+.+++.+++.+++||..|+.|||.++++|||||.+|||++.+                    
T Consensus       130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N--------------------  189 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQN--------------------  189 (668)
T ss_pred             EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCC--------------------
Confidence                             2578999999999999999999999999999999999998654                    


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                             .++||+|||++.......  +++||++-|.+||++.|.+|. +.+|-|||||+||.|+.|..||++.+....+
T Consensus       190 -------~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lv  262 (668)
T KOG0611|consen  190 -------NNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLV  262 (668)
T ss_pred             -------CCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHH
Confidence                   467888888887665543  568999999999999999986 7899999999999999999999999887777


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      .+|.+..-.-                                                   ...+.++.-||+.||.+||
T Consensus       263 rQIs~GaYrE---------------------------------------------------P~~PSdA~gLIRwmLmVNP  291 (668)
T KOG0611|consen  263 RQISRGAYRE---------------------------------------------------PETPSDASGLIRWMLMVNP  291 (668)
T ss_pred             HHhhcccccC---------------------------------------------------CCCCchHHHHHHHHHhcCc
Confidence            7665422111                                                   1123467789999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ++|.|+++|..|=|+.=....+
T Consensus       292 ~RRATieDiAsHWWvNwgy~~~  313 (668)
T KOG0611|consen  292 ERRATIEDIASHWWVNWGYNMP  313 (668)
T ss_pred             ccchhHHHHhhhheeecccccc
Confidence            9999999999998887555444

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.2e-40  Score=314.49  Aligned_cols=218  Identities=26%  Similarity=0.380  Sum_probs=171.2

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||+||+|+++.+++.||||++++..    ...+....|+.++..+ .|+++....                  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997532    2334566788888876 466663211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~--------------------------  134 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGH--------------------------  134 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc--------------------------
Confidence                     235788899999999999999999999999999999999987664                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       ++|+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       135 -~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~  213 (320)
T cd05590         135 -CKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV  213 (320)
T ss_pred             -EEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC
Confidence             4555555543321   112235799999999999988899999999999999999999999988776665544432111


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH--
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA--  380 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta--  380 (405)
                      .                                                  .+...+.++.+||.+||+.||++|+++  
T Consensus       214 ~--------------------------------------------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (320)
T cd05590         214 V--------------------------------------------------YPTWLSQDAVDILKAFMTKNPTMRLGSLT  243 (320)
T ss_pred             C--------------------------------------------------CCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            1                                                  112346688999999999999999998  


Q ss_pred             ----HHHHcCCCCCCC
Q 015532          381 ----REALRHPFFTRD  392 (405)
Q Consensus       381 ----~elL~hp~f~~~  392 (405)
                          +++++||||+.-
T Consensus       244 ~~~~~~~~~h~~f~~~  259 (320)
T cd05590         244 LGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCHHHHHcCCCcCCC
Confidence                999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.9e-40  Score=331.00  Aligned_cols=268  Identities=24%  Similarity=0.293  Sum_probs=176.1

Q ss_pred             eEeeCCccCCCeEEEeeeecccceeEEEEEecCCC-cEEEEE------------------EecchhhhhHHHHHHHHHHH
Q 015532           83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIK------------------IVRSINKYREAAMIEIDVLQ  143 (405)
Q Consensus        83 ~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~-~~vAiK------------------~~~~~~~~~~~~~~E~~il~  143 (405)
                      .+..++.+.++|+++++||+|+||+||+|..+... ..+++|                  .++........+.+|+.+|+
T Consensus       139 ~~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~  218 (501)
T PHA03210        139 KLKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALG  218 (501)
T ss_pred             hcccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHH
Confidence            34455667789999999999999999998764322 222222                  22222233456778999999


Q ss_pred             HHhhcCCCCCcc-------------------------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcE
Q 015532          144 RLARHDIGGTRY-------------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  192 (405)
Q Consensus       144 ~l~~~~~~~~~~-------------------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  192 (405)
                      ++.|++++....                               .......++.++.||+.||.|||++|||||||||+||
T Consensus       219 ~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NI  298 (501)
T PHA03210        219 RLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENI  298 (501)
T ss_pred             hCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence            999999854220                               0112456778999999999999999999999999999


Q ss_pred             EEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhH
Q 015532          193 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDL  268 (405)
Q Consensus       193 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di  268 (405)
                      |++.++.                           +||+|||++.......    ...+||..|+|||++.+..++.++||
T Consensus       299 Ll~~~~~---------------------------vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  351 (501)
T PHA03210        299 FLNCDGK---------------------------IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDI  351 (501)
T ss_pred             EECCCCC---------------------------EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHH
Confidence            9976554                           5666666665433221    22579999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCC-CCC--ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhc
Q 015532          269 WSVGCILVELCSGEALF-QTH--ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL  345 (405)
Q Consensus       269 wSlG~il~~lltg~~pf-~~~--~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (405)
                      |||||++|||++|..++ ...  .....+..+...++..+..+..... ....+...   ..+....   .         
T Consensus       352 wSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~i~~---~~~~~~~---~---------  415 (501)
T PHA03210        352 WSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPC-KLFDYIDS---AEIDHAG---H---------  415 (501)
T ss_pred             HHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHH-HHHHHhhh---hhcccCc---c---------
Confidence            99999999999987544 322  2334444444443332221110000 00011000   0000000   0         


Q ss_pred             cchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCC
Q 015532          346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       346 ~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~  395 (405)
                      ..+....  ....+.++.++|.+||++||++||||.|+|+||||+....+
T Consensus       416 ~~~~~~~--~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~  463 (501)
T PHA03210        416 SVPPLIR--NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEE  463 (501)
T ss_pred             chhhHHH--hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCch
Confidence            0000000  01245678899999999999999999999999999886544

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.8e-40  Score=319.78  Aligned_cols=230  Identities=24%  Similarity=0.388  Sum_probs=178.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||++++..    .....+..|+.+++.+.|+++....            
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            367999999999999999999999999999999996532    2234466899999999999884321            


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                     
T Consensus       122 ~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~---------------------  180 (370)
T cd05596         122 MEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH---------------------  180 (370)
T ss_pred             EcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCC---------------------
Confidence                          124678889999999999999999999999999999999977664                     


Q ss_pred             CCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC----CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL----GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                            +||+|||++......    ....+||+.|+|||++.+.    .++.++|||||||++|+|++|..||.+.+...
T Consensus       181 ------~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~  254 (370)
T cd05596         181 ------LKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG  254 (370)
T ss_pred             ------EEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH
Confidence                  555555555433211    1235799999999999754    37899999999999999999999998876655


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.....                      ...++.                        ...++.++.+||.+||+.
T Consensus       255 ~~~~i~~~~~----------------------~~~~~~------------------------~~~~s~~~~~li~~~L~~  288 (370)
T cd05596         255 TYSKIMDHKN----------------------SLTFPD------------------------DIEISKQAKDLICAFLTD  288 (370)
T ss_pred             HHHHHHcCCC----------------------cCCCCC------------------------cCCCCHHHHHHHHHHccC
Confidence            4443322100                      011111                        113477899999999999


Q ss_pred             CCCC--CCCHHHHHcCCCCCCCC
Q 015532          373 DPAE--RLKAREALRHPFFTRDV  393 (405)
Q Consensus       373 dP~~--Rpta~elL~hp~f~~~~  393 (405)
                      +|++  |+|++|+++||||++..
T Consensus       289 ~p~r~~R~s~~ell~h~~~~~~~  311 (370)
T cd05596         289 REVRLGRNGVDEIKSHPFFKNDQ  311 (370)
T ss_pred             hhhccCCCCHHHHhcCcccCCCC
Confidence            9998  99999999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.2e-40  Score=316.89  Aligned_cols=218  Identities=26%  Similarity=0.406  Sum_probs=172.6

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +.||+|+||.||+|++..+++.||+|+++...    .....+..|+++++.+.|+++....                   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532    2234567799999999999874321                   


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                              ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++.                          
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~--------------------------  134 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH--------------------------  134 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCC--------------------------
Confidence                    2357889999999999999999997 79999999999999976654                          


Q ss_pred             CceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       +||+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+.....
T Consensus       135 -~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~  213 (325)
T cd05594         135 -IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI  213 (325)
T ss_pred             -EEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC
Confidence             56666665543211   11235799999999999998999999999999999999999999987665544433321100


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC----
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL----  378 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp----  378 (405)
                                                                        ..+...++++.+||.+||+.||++|+    
T Consensus       214 --------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (325)
T cd05594         214 --------------------------------------------------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGP  243 (325)
T ss_pred             --------------------------------------------------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCC
Confidence                                                              01123467899999999999999997    


Q ss_pred             -CHHHHHcCCCCCCC
Q 015532          379 -KAREALRHPFFTRD  392 (405)
Q Consensus       379 -ta~elL~hp~f~~~  392 (405)
                       ++.++++||||.+.
T Consensus       244 ~~~~~il~h~~~~~~  258 (325)
T cd05594         244 DDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCHHHHhcCCCcCCC
Confidence             99999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=4.5e-40  Score=311.81  Aligned_cols=218  Identities=26%  Similarity=0.378  Sum_probs=168.9

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|+++.+++.||||+++...    ...+....|..++..+ .|+++....                  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            47999999999999999999999999997532    2334556788887764 666653211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||+|||++||+||||||+|||++.++.                          
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~--------------------------  134 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGH--------------------------  134 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--------------------------
Confidence                     135788899999999999999999999999999999999977664                          


Q ss_pred             CceeccCCCCccc---cCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       ++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       135 -~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~  213 (316)
T cd05620         135 -IKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP  213 (316)
T ss_pred             -EEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence             455555554321   1122345799999999999998999999999999999999999999988766554443322110


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH-H
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA-R  381 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta-~  381 (405)
                      .                                                  .....+.++.+||.+||+.||++|+++ +
T Consensus       214 ~--------------------------------------------------~~~~~~~~~~~li~~~l~~dP~~R~~~~~  243 (316)
T cd05620         214 H--------------------------------------------------YPRWITKESKDILEKLFERDPTRRLGVVG  243 (316)
T ss_pred             C--------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence            0                                                  112246688999999999999999997 5


Q ss_pred             HHHcCCCCCCC
Q 015532          382 EALRHPFFTRD  392 (405)
Q Consensus       382 elL~hp~f~~~  392 (405)
                      ++++||||+..
T Consensus       244 ~~~~h~~f~~~  254 (316)
T cd05620         244 NIRGHPFFKTI  254 (316)
T ss_pred             HHHcCCCcCCC
Confidence            89999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=8.5e-40  Score=310.84  Aligned_cols=223  Identities=25%  Similarity=0.360  Sum_probs=175.8

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|++.+.||+|+||.||+|+++.+++.||||++++..    ...+....|+.++..+.|+++....              
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3788899999999999999999999999999997532    2234567788899888876642211              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.                     
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~---------------------  139 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGH---------------------  139 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC---------------------
Confidence                          135788999999999999999999999999999999999976654                     


Q ss_pred             CCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            ++|+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+
T Consensus       140 ------ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i  213 (323)
T cd05615         140 ------IKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI  213 (323)
T ss_pred             ------EEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                  55566665543211   122356899999999999888999999999999999999999999887765554444


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......                                                  .+...+.++.+|+.+||+.||++|
T Consensus       214 ~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~l~~~p~~R  243 (323)
T cd05615         214 MEHNVS--------------------------------------------------YPKSLSKEAVSICKGLMTKHPSKR  243 (323)
T ss_pred             HhCCCC--------------------------------------------------CCccCCHHHHHHHHHHcccCHhhC
Confidence            321111                                                  112346688999999999999999


Q ss_pred             CC-----HHHHHcCCCCCCC
Q 015532          378 LK-----AREALRHPFFTRD  392 (405)
Q Consensus       378 pt-----a~elL~hp~f~~~  392 (405)
                      ++     .+++++||||+.-
T Consensus       244 ~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         244 LGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CCCCCCCHHHHhcCcccCCC
Confidence            97     5899999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-40  Score=272.15  Aligned_cols=253  Identities=33%  Similarity=0.526  Sum_probs=194.4

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|.-.++||+|.||+|++|+.+.+++.||+|.++..+   ......++||-+|+.+.|.|++...               
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            4777899999999999999999999999999997533   3457789999999999999985421               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  .+.+..+.++.++.|++.||.|+|++++.||||||+|+||+.+|.                       
T Consensus        83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge-----------------------  139 (292)
T KOG0662|consen   83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE-----------------------  139 (292)
T ss_pred             hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc-----------------------
Confidence                        356778899999999999999999999999999999999987765                       


Q ss_pred             CCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                          +|++|||+++...-..   +..+-|.+|++|.++.|.. |+...|+||.|||+.|+.. |++.|++.+..+++.+|
T Consensus       140 ----lkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkri  215 (292)
T KOG0662|consen  140 ----LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  215 (292)
T ss_pred             ----EEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHH
Confidence                5555555554433222   1236789999999999875 8999999999999999986 99999999999999999


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+.+|.+.++.                   ||.-..-+....  .........-.+........-+||+.++|.-+|.+|
T Consensus       216 f~~lg~p~ed~-------------------wps~t~lpdyk~--yp~ypattswsqivp~lns~grdllqkll~cnp~qr  274 (292)
T KOG0662|consen  216 FRLLGTPTEDQ-------------------WPSMTKLPDYKP--YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQR  274 (292)
T ss_pred             HHHhCCCcccc-------------------CCccccCCCCcc--cCCccccchHHHHhhhhcchhHHHHHHHhccCcccc
Confidence            99999876543                   222111000000  000000000011223345567899999999999999


Q ss_pred             CCHHHHHcCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDV  393 (405)
Q Consensus       378 pta~elL~hp~f~~~~  393 (405)
                      ++|+++|+||||....
T Consensus       275 isaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  275 ISAEAALQHPYFSDFS  290 (292)
T ss_pred             cCHHHHhcCccccccC
Confidence            9999999999998753

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-42  Score=325.27  Aligned_cols=230  Identities=27%  Similarity=0.468  Sum_probs=190.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc-hhhhhHHHHHHHHHHHHHhhcCCCCC-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLARHDIGGT-----------------  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~-~~~~~~~~~~E~~il~~l~~~~~~~~-----------------  153 (405)
                      +.|+|+..||.|+||.||+|..+.++-..|-|+|.. .....+.++.||+||..+.||++++.                 
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            568999999999999999999999999999999864 34567889999999999999987432                 


Q ss_pred             -----------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          154 -----------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       154 -----------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                 +...+.+.++..+++|++.||.|||+++|||||||..|||++.+|                        
T Consensus       112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG------------------------  167 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG------------------------  167 (1187)
T ss_pred             CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC------------------------
Confidence                       245789999999999999999999999999999999999998776                        


Q ss_pred             CCCCceeccCCCCcccc---CCccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          223 KSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                         .++|+|||.+....   ....++.|||+|||||+...     .+|++++||||||++|.||..+.+|....+....+
T Consensus       168 ---dirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl  244 (1187)
T KOG0579|consen  168 ---DIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL  244 (1187)
T ss_pred             ---cEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH
Confidence               46777777664332   23456899999999999864     57999999999999999999999999888777766


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..|.+...  |                                             ..-.+..++..|.|||.+||..||
T Consensus       245 lKiaKSeP--P---------------------------------------------TLlqPS~Ws~~F~DfLk~cL~Knp  277 (1187)
T KOG0579|consen  245 LKIAKSEP--P---------------------------------------------TLLQPSHWSRSFSDFLKRCLVKNP  277 (1187)
T ss_pred             HHHhhcCC--C---------------------------------------------cccCcchhhhHHHHHHHHHHhcCC
Confidence            65544211  1                                             111234557789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~  395 (405)
                      +.||++.++|+||||+...+.
T Consensus       278 ~~Rp~aaqll~Hpfv~~~~Sn  298 (1187)
T KOG0579|consen  278 RNRPPAAQLLKHPFVQNAPSN  298 (1187)
T ss_pred             ccCCCHHHHhhCcccccCCcc
Confidence            999999999999999976543

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1e-39  Score=309.35  Aligned_cols=257  Identities=27%  Similarity=0.472  Sum_probs=175.1

Q ss_pred             EeeeecccceeEEEEEecC--CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------------
Q 015532           97 LSKMGEGTFGQVVECFDNE--KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------------  154 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~--~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------------  154 (405)
                      ..+||+|+||+||+|++..  ++..||+|.++... ....+.+|+++++.+.|+++....                    
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            3689999999999999754  56889999986543 234567899999999999873210                    


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+|||+...+                   
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~-------------------  145 (317)
T cd07867          85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG-------------------  145 (317)
T ss_pred             cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCC-------------------
Confidence                             11367888999999999999999999999999999999995322                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                          +.+..+||+|||++......      .....||..|+|||++.+. .++.++|||||||++|+|++|.+||.....
T Consensus       146 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~  221 (317)
T cd07867         146 ----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  221 (317)
T ss_pred             ----CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccc
Confidence                13445778888877644322      1235789999999999874 588999999999999999999999975432


Q ss_pred             ---------HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          291 ---------LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       291 ---------~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                               ...+..+...+|......+....... .+....  ..+....         .................+..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  289 (317)
T cd07867         222 DIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMP-EYPTLQ--KDFRRTT---------YANSSLIKYMEKHKVKPDSK  289 (317)
T ss_pred             cccccccccHHHHHHHHHhcCCCChhhhhhhhhcc-cchhhh--hhhcccc---------cCCchhhhhhhcccCCCChH
Confidence                     23445555555544433222111000 000000  0000000         00000000011111233567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      +.+||.+||+.||.+|||++|+|+||||
T Consensus       290 ~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         290 VFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            8999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.9e-40  Score=315.68  Aligned_cols=251  Identities=24%  Similarity=0.358  Sum_probs=175.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      .+|++.+.||+|+||.||+|++..+++.||+|+....     ....|+.+++.+.|+++....                 
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  140 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS  140 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence            5799999999999999999999999999999986432     235689999999999985432                 


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..++.++.||+.||.|||++||+||||||+|||++..+                          
T Consensus       141 ~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--------------------------  194 (357)
T PHA03209        141 SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--------------------------  194 (357)
T ss_pred             CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--------------------------
Confidence                      23478899999999999999999999999999999999997655                          


Q ss_pred             CCceeccCCCCccccC--CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCC-CCCCCCh---------HH
Q 015532          225 SAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA-LFQTHEN---------LE  292 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~-pf~~~~~---------~~  292 (405)
                       .++|+|||++.....  ......||..|+|||++.+..++.++|||||||++|+|+++.. +|.....         ..
T Consensus       195 -~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~  273 (357)
T PHA03209        195 -QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS  273 (357)
T ss_pred             -CEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHH
Confidence             456666666653222  1223578999999999999899999999999999999998544 4443211         12


Q ss_pred             HHHHHHHHhCCCChHHHHHhh-HhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          293 HLAMMERVLGPLPHHMVIRAD-RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .+..+...++..|..+..... .....+.........+                 ............+.++.+||.+||+
T Consensus       274 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~li~~mL~  336 (357)
T PHA03209        274 HLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQP-----------------YTRYPCFQRVNLPIDGEFLVHKMLT  336 (357)
T ss_pred             HHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCc-----------------ccccHHHhccCCCchHHHHHHHHHc
Confidence            233333444443332210000 0000110000000000                 0000000112345678899999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~  391 (405)
                      +||++||||.|+|+||||++
T Consensus       337 ~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        337 FDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CCcccCcCHHHHhcCchhcc
Confidence            99999999999999999986

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=3.9e-40  Score=312.95  Aligned_cols=218  Identities=23%  Similarity=0.344  Sum_probs=170.9

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|++..+++.||||+++...    ...+.+..|..++..+ .|+++....                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999999999999999997532    2234566788888876 566652211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~--------------------------  134 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGH--------------------------  134 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--------------------------
Confidence                     235678889999999999999999999999999999999977664                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       ++|+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus       135 -~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~  213 (321)
T cd05591         135 -CKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV  213 (321)
T ss_pred             -EEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence             5555665554321   112235789999999999998999999999999999999999999998877665554432110


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC----
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL----  378 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp----  378 (405)
                      .                                                  .+...+.++.+||.+||+.||++|+    
T Consensus       214 ~--------------------------------------------------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~  243 (321)
T cd05591         214 L--------------------------------------------------YPVWLSKEAVSILKAFMTKNPNKRLGCVA  243 (321)
T ss_pred             C--------------------------------------------------CCCCCCHHHHHHHHHHhccCHHHcCCCCC
Confidence            0                                                  0112356889999999999999999    


Q ss_pred             ---CHHHHHcCCCCCCC
Q 015532          379 ---KAREALRHPFFTRD  392 (405)
Q Consensus       379 ---ta~elL~hp~f~~~  392 (405)
                         +++++++||||...
T Consensus       244 ~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         244 SQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CCCCHHHHhcCCccCCC
Confidence               99999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=3.8e-40  Score=314.26  Aligned_cols=227  Identities=27%  Similarity=0.403  Sum_probs=177.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.||||+++....    ..+.+..|+.+++.+.|+++....             
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            369999999999999999999999999999999975432    345567899999999998873321             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                    
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~--------------------  140 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGH--------------------  140 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCC--------------------
Confidence                           135788899999999999999999999999999999999976654                    


Q ss_pred             CCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHh------CCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVIL------GLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                             +||+|||++.......    ....||+.|+|||++.      +..++.++|||||||++|+|++|..||....
T Consensus       141 -------~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~  213 (330)
T cd05601         141 -------IKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT  213 (330)
T ss_pred             -------EEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence                   5666666654432221    1246899999999987      4567899999999999999999999998876


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ....+..+.....                      ...++                        .....+.++.+||.+|
T Consensus       214 ~~~~~~~i~~~~~----------------------~~~~~------------------------~~~~~~~~~~~li~~l  247 (330)
T cd05601         214 SAKTYNNIMNFQR----------------------FLKFP------------------------EDPKVSSDFLDLIQSL  247 (330)
T ss_pred             HHHHHHHHHcCCC----------------------ccCCC------------------------CCCCCCHHHHHHHHHH
Confidence            6554443322100                      00111                        0123467899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      |+ ||++|+|++++++||||+..
T Consensus       248 l~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         248 LC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             cc-ChhhCCCHHHHhCCCCcCCC
Confidence            98 99999999999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=7.2e-40  Score=312.59  Aligned_cols=227  Identities=28%  Similarity=0.399  Sum_probs=169.2

Q ss_pred             CeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHh-hcCCCCCc---------
Q 015532           93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTR---------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~-~~~~~~~~---------  154 (405)
                      +|++.+.||+|+||+||+|++.   .+++.||+|++++..     ...+....|+++++.+. |+++....         
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4899999999999999999874   478999999996432     22345678999999996 45442210         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                 
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~-----------------  143 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGH-----------------  143 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCC-----------------
Confidence                              235788999999999999999999999999999999999976654                 


Q ss_pred             cccCCCCCCCceeccCCCCccccC----CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQ----DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                                ++|+|||++.....    .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||......
T Consensus       144 ----------~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  213 (332)
T cd05614         144 ----------VVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER  213 (332)
T ss_pred             ----------EEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC
Confidence                      55666665543211    11235799999999999875 4789999999999999999999999653321


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+......                                              ........++..+.+||.+||+
T Consensus       214 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~  247 (332)
T cd05614         214 NTQSEVSRRILK----------------------------------------------CDPPFPSFIGPEAQDLLHKLLR  247 (332)
T ss_pred             CCHHHHHHHHhc----------------------------------------------CCCCCCCCCCHHHHHHHHHHcC
Confidence            111111100000                                              0001112356789999999999


Q ss_pred             cCCCCCC-----CHHHHHcCCCCCCC
Q 015532          372 YDPAERL-----KAREALRHPFFTRD  392 (405)
Q Consensus       372 ~dP~~Rp-----ta~elL~hp~f~~~  392 (405)
                      .||++|+     +++++++||||+..
T Consensus       248 ~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         248 KDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            9999999     89999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-39  Score=308.04  Aligned_cols=264  Identities=28%  Similarity=0.479  Sum_probs=191.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.++|++.++||+|+||.||+|++..+++.||||+++..  ......+..|+.+++.+.|+++....             
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            457899999999999999999999999999999998642  23345677899999999998874321             


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+||+++.++.++++|||++.......  
T Consensus        83 ~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~--  160 (336)
T cd07849          83 VYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH--  160 (336)
T ss_pred             EEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc--
Confidence                             1247888999999999999999999999999999999999877665555555432211000  


Q ss_pred             ccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                                         ..........||..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.......
T Consensus       161 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~  221 (336)
T cd07849         161 -------------------DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNL  221 (336)
T ss_pred             -------------------cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                               00001112468899999998765 4688999999999999999999999998887777777


Q ss_pred             HHHHhCCCChHHHHHhh-HhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          297 MERVLGPLPHHMVIRAD-RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      +...++..+.+...... .....+....   ...                 ............+..+.+||.+||+.||+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~~~~~~~~~~~~~~~~li~~~l~~dP~  281 (336)
T cd07849         222 ILGVLGTPSQEDLNCIISLRARNYIKSL---PFK-----------------PKVPWNKLFPNADPKALDLLDKMLTFNPH  281 (336)
T ss_pred             HHHHcCCCCHHHHHHhhchhhhhHHhhc---CcC-----------------CcccHHHHhcccCcHHHHHHHHHcCCChh
Confidence            77777765543322111 1111111000   000                 00000011123467899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~  394 (405)
                      +|||+.|+++||||.+...
T Consensus       282 ~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         282 KRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             hCcCHHHHhcCccccccCC
Confidence            9999999999999987643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=6.9e-40  Score=316.81  Aligned_cols=230  Identities=23%  Similarity=0.386  Sum_probs=177.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++.+..    .....+..|+.+++.+.|+++....           
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            3468999999999999999999999999999999986422    2234567899999999999874321           


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||+|||++||+||||||+|||++.++.                    
T Consensus       121 v~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~--------------------  180 (370)
T cd05621         121 VMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGH--------------------  180 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC--------------------
Confidence                           124678899999999999999999999999999999999976654                    


Q ss_pred             CCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCC----CCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                             +||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|+|++|..||.+.+..
T Consensus       181 -------~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~  253 (370)
T cd05621         181 -------LKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV  253 (370)
T ss_pred             -------EEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH
Confidence                   566666655443221    12357999999999997643    788999999999999999999999887765


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+.....                      ...++.                        ....+..+++++.+||+
T Consensus       254 ~~~~~i~~~~~----------------------~~~~p~------------------------~~~~s~~~~~li~~~L~  287 (370)
T cd05621         254 GTYSKIMDHKN----------------------SLNFPE------------------------DVEISKHAKNLICAFLT  287 (370)
T ss_pred             HHHHHHHhCCc----------------------ccCCCC------------------------cccCCHHHHHHHHHHcc
Confidence            55444332110                      111111                        11346788999999998


Q ss_pred             cCCCC--CCCHHHHHcCCCCCCC
Q 015532          372 YDPAE--RLKAREALRHPFFTRD  392 (405)
Q Consensus       372 ~dP~~--Rpta~elL~hp~f~~~  392 (405)
                      .++.+  |+|++|+++||||+..
T Consensus       288 ~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         288 DREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             CchhccCCCCHHHHhcCcccCCC
Confidence            65544  8899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=5.2e-40  Score=312.34  Aligned_cols=218  Identities=25%  Similarity=0.373  Sum_probs=171.0

Q ss_pred             eeeecccceeEEEEEec---CCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           98 SKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.||+|+||.||+|++.   .+++.||||+++...     .....+..|+.+|+.+.|+++....               
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            68999999999999874   468899999997532     2234566899999999999984321               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                       
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-----------------------  138 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGH-----------------------  138 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC-----------------------
Confidence                        134577888899999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                          +||+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+..
T Consensus       139 ----~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~  214 (323)
T cd05584         139 ----VKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK  214 (323)
T ss_pred             ----EEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence                55556665542211   11234789999999999988899999999999999999999999988766554443322


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC-
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-  378 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp-  378 (405)
                      ...                                                  ..+...++.+.+||.+||+.||++|+ 
T Consensus       215 ~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~  244 (323)
T cd05584         215 GKL--------------------------------------------------NLPPYLTPEARDLLKKLLKRNPSSRLG  244 (323)
T ss_pred             CCC--------------------------------------------------CCCCCCCHHHHHHHHHHcccCHhHcCC
Confidence            110                                                  11123466889999999999999999 


Q ss_pred             ----CHHHHHcCCCCCCC
Q 015532          379 ----KAREALRHPFFTRD  392 (405)
Q Consensus       379 ----ta~elL~hp~f~~~  392 (405)
                          +++++++||||+..
T Consensus       245 ~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         245 AGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             CCCCCHHHHhcCCCcCCC
Confidence                89999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=9.7e-40  Score=309.51  Aligned_cols=218  Identities=27%  Similarity=0.368  Sum_probs=168.8

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|++..+++.||||+++...    ...+....|..++..+ .|+++....                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            47999999999999999999999999997532    2234455677777654 676663211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||||+|||++.++                           
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~---------------------------  133 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG---------------------------  133 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC---------------------------
Confidence                     23578889999999999999999999999999999999997655                           


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                      .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       134 ~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~  213 (316)
T cd05592         134 HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP  213 (316)
T ss_pred             CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            45666666654321   122335799999999999998999999999999999999999999998776555544322111


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH-H
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA-R  381 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta-~  381 (405)
                      .                                                  ....++.++.+||.+||+.||++|+++ .
T Consensus       214 ~--------------------------------------------------~~~~~~~~~~~ll~~~l~~~P~~R~~~~~  243 (316)
T cd05592         214 H--------------------------------------------------FPRWISKEAKDCLSKLFERDPTKRLGVDG  243 (316)
T ss_pred             C--------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence            1                                                  112346688999999999999999985 5


Q ss_pred             HHHcCCCCCCC
Q 015532          382 EALRHPFFTRD  392 (405)
Q Consensus       382 elL~hp~f~~~  392 (405)
                      ++++||||...
T Consensus       244 ~l~~h~~~~~~  254 (316)
T cd05592         244 DIRQHPFFRGI  254 (316)
T ss_pred             HHHcCcccCCC
Confidence            88999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-39  Score=303.28  Aligned_cols=228  Identities=25%  Similarity=0.366  Sum_probs=177.1

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +|++.++||+|+||+||++.+..+++.||||++....    .....+.+|+.+++.++|+++....              
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4899999999999999999999999999999986432    1234467899999999998873211              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.|++.||.|||++||+||||||+||+++.++.                    
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--------------------  140 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGH--------------------  140 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCC--------------------
Confidence                           134788899999999999999999999999999999999976554                    


Q ss_pred             CCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                             ++|+|||++.......  ....|+..|+|||++.+..++.++||||+||++|+|++|..||.+.........+
T Consensus       141 -------~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~  213 (285)
T cd05605         141 -------IRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEV  213 (285)
T ss_pred             -------EEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHH
Confidence                   5566666554432211  2247899999999999888999999999999999999999999876543333222


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .......+                                              ......++..+.+||.+||..||++|
T Consensus       214 ~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~~P~~R  247 (285)
T cd05605         214 ERRVKEDQ----------------------------------------------EEYSEKFSEAARSICRQLLTKDPGFR  247 (285)
T ss_pred             HHHhhhcc----------------------------------------------cccCcccCHHHHHHHHHHccCCHHHh
Confidence            21110000                                              01112356788999999999999999


Q ss_pred             C-----CHHHHHcCCCCCCCC
Q 015532          378 L-----KAREALRHPFFTRDV  393 (405)
Q Consensus       378 p-----ta~elL~hp~f~~~~  393 (405)
                      |     +++++++||||....
T Consensus       248 ~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05605         248 LGCRGEGAEEVKAHPFFRTAN  268 (285)
T ss_pred             cCCCCCCHHHHhcCcCccCCC
Confidence            9     999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.4e-39  Score=308.45  Aligned_cols=219  Identities=26%  Similarity=0.380  Sum_probs=169.8

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||+||+|++..+++.||||+++...    ...+....|..++..+ .|+++....                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            47999999999999999999999999997532    2234556688888764 777763211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++.++..++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~--------------------------  134 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGH--------------------------  134 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC--------------------------
Confidence                     135788899999999999999999999999999999999976654                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       ++|+|||++....   .......||..|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       135 -~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~  213 (316)
T cd05619         135 -IKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNP  213 (316)
T ss_pred             -EEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence             5566666554321   112335789999999999998999999999999999999999999988766554443321100


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH-
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR-  381 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~-  381 (405)
                      .                                                  .....+.++.+||.+||+.||++|+++. 
T Consensus       214 ~--------------------------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~  243 (316)
T cd05619         214 C--------------------------------------------------YPRWLTREAKDILVKLFVREPERRLGVKG  243 (316)
T ss_pred             C--------------------------------------------------CCccCCHHHHHHHHHHhccCHhhcCCChH
Confidence            0                                                  0112356789999999999999999996 


Q ss_pred             HHHcCCCCCCCC
Q 015532          382 EALRHPFFTRDV  393 (405)
Q Consensus       382 elL~hp~f~~~~  393 (405)
                      ++++||||+...
T Consensus       244 ~l~~h~~~~~~~  255 (316)
T cd05619         244 DIRQHPFFREID  255 (316)
T ss_pred             HHHcCcccCCCC
Confidence            899999998743

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.2e-39  Score=309.07  Aligned_cols=218  Identities=25%  Similarity=0.354  Sum_probs=171.3

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||+||+|++..+++.||||++++..    ...+....|+.++..+ .|+++....                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            47999999999999999999999999997532    2334566788898888 466663211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~--------------------------  134 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGH--------------------------  134 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCc--------------------------
Confidence                     235789999999999999999999999999999999999976654                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       ++|+|||++....   ......+||..|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       135 -~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~  213 (318)
T cd05570         135 -IKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV  213 (318)
T ss_pred             -EEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC
Confidence             5556666553311   112235789999999999999999999999999999999999999987765554433321100


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH--
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA--  380 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta--  380 (405)
                                                                        ......+..+.+||.+||+.||++|||+  
T Consensus       214 --------------------------------------------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~  243 (318)
T cd05570         214 --------------------------------------------------RYPRWLSKEAKSILKSFLTKNPEKRLGCLP  243 (318)
T ss_pred             --------------------------------------------------CCCCcCCHHHHHHHHHHccCCHHHcCCCCC
Confidence                                                              0112346688999999999999999999  


Q ss_pred             ---HHHHcCCCCCCC
Q 015532          381 ---REALRHPFFTRD  392 (405)
Q Consensus       381 ---~elL~hp~f~~~  392 (405)
                         .++++||||+..
T Consensus       244 ~~~~~ll~~~~~~~~  258 (318)
T cd05570         244 TGEQDIKGHPFFREI  258 (318)
T ss_pred             CCHHHHhcCCCcCCC
Confidence               999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.4e-39  Score=325.26  Aligned_cols=227  Identities=24%  Similarity=0.260  Sum_probs=178.6

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCC-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT-------------  153 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~-------------  153 (405)
                      ..++|++.+.||+|+||+||+|++..+++.||||+++..   ......+.+|+.++..+.|+++...             
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~  109 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE  109 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence            357899999999999999999999999999999998643   2334556789999998888765310             


Q ss_pred             ----------------c----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          154 ----------------R----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       154 ----------------~----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                                      +          ...+++..+..++.||+.||.|||++||+||||||+|||++.++.        
T Consensus       110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~--------  181 (496)
T PTZ00283        110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGL--------  181 (496)
T ss_pred             cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCC--------
Confidence                            0          124678889999999999999999999999999999999987664        


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCC
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~  282 (405)
                                         +||+|||+++....     .....+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       182 -------------------vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~  242 (496)
T PTZ00283        182 -------------------VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK  242 (496)
T ss_pred             -------------------EEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence                               55555655543221     123357999999999999989999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||.+.+..+.+..+...  ..                                               .......++++
T Consensus       243 ~Pf~~~~~~~~~~~~~~~--~~-----------------------------------------------~~~~~~~~~~l  273 (496)
T PTZ00283        243 RPFDGENMEEVMHKTLAG--RY-----------------------------------------------DPLPPSISPEM  273 (496)
T ss_pred             CCCCCCCHHHHHHHHhcC--CC-----------------------------------------------CCCCCCCCHHH
Confidence            999877655544332210  00                                               00113456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      .+|+.+||+.||++|||+.++++|||++..
T Consensus       274 ~~li~~~L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        274 QEIVTALLSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             HHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence            999999999999999999999999998753

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-38  Score=305.43  Aligned_cols=262  Identities=27%  Similarity=0.510  Sum_probs=197.7

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|+++...   ...+.+.+|+.+++++.|+++....           
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   93 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence            45688999999999999999999999999999999986432   2245577899999999999874321           


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+||+++.++                
T Consensus        94 ~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~----------------  157 (345)
T cd07877          94 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC----------------  157 (345)
T ss_pred             cccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC----------------
Confidence                                02467889999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                                 .++|+|||++...........++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+....
T Consensus       158 -----------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~  226 (345)
T cd07877         158 -----------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ  226 (345)
T ss_pred             -----------CEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                       4566666666554444344578899999999877 4688999999999999999999999998887777


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhh-hhhcccCchHHHHHHHHHcccc
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      +..+.+..+..+..+...........+.                 ..   ....+.. ........++.+++||.+||+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  286 (345)
T cd07877         227 LKLILRLVGTPGAELLKKISSESARNYI-----------------QS---LTQMPKMNFANVFIGANPLAVDLLEKMLVL  286 (345)
T ss_pred             HHHHHHHhCCCCHHHHhhcccHhHHHHH-----------------HH---hcccCCcchhhhcCCCCHHHHHHHHHHcCC
Confidence            7777777777666554332211110000                 00   0000000 0011123467899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCCCCCc
Q 015532          373 DPAERLKAREALRHPFFTRDVRRPT  397 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~~~~~  397 (405)
                      ||++|+|+.++++||||++......
T Consensus       287 dp~~R~t~~e~l~h~~f~~~~~~~~  311 (345)
T cd07877         287 DSDKRITAAQALAHAYFAQYHDPDD  311 (345)
T ss_pred             ChhhcCCHHHHhcChhhhhcCCCCc
Confidence            9999999999999999997655433

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=7.5e-40  Score=315.92  Aligned_cols=251  Identities=25%  Similarity=0.356  Sum_probs=184.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.|++.+.||+|+||+||+|++..+++.||||+++...    .....+..|+.++..+.|+++....             
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            35899999999999999999999999999999997532    2334567799999999998773211             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc--c
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY--F  218 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~--~  218 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.++++|||++.........  .
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence                          235788999999999999999999999999999999999999999999999987643221100  0


Q ss_pred             cCCCCCCCceeccCCCCcc------------ccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTF------------EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                      ....   .....++.+...            ........+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       161 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~  237 (360)
T cd05627         161 RNLT---HNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (360)
T ss_pred             cccc---cCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence            0000   000011111000            0001123579999999999999999999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +.+.......+.....                      ...++.                        ....+.++++||
T Consensus       238 ~~~~~~~~~~i~~~~~----------------------~~~~p~------------------------~~~~s~~~~~li  271 (360)
T cd05627         238 SETPQETYRKVMNWKE----------------------TLVFPP------------------------EVPISEKAKDLI  271 (360)
T ss_pred             CCCHHHHHHHHHcCCC----------------------ceecCC------------------------CCCCCHHHHHHH
Confidence            8776555443322100                      000110                        012467889999


Q ss_pred             HHccccCCCCCC---CHHHHHcCCCCCCC
Q 015532          367 QGLLRYDPAERL---KAREALRHPFFTRD  392 (405)
Q Consensus       367 ~~~L~~dP~~Rp---ta~elL~hp~f~~~  392 (405)
                      .+|+. ||++|+   +++|+++||||++.
T Consensus       272 ~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         272 LRFCT-DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             HHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence            99874 999998   58999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.4e-40  Score=282.34  Aligned_cols=262  Identities=30%  Similarity=0.566  Sum_probs=201.5

Q ss_pred             ceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh-hcCCCCC-------
Q 015532           82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGT-------  153 (405)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~-~~~~~~~-------  153 (405)
                      +.+..|  -.+.|++.+++|+|-|+.|+.|....+++.++||+++...+  ....+|+.||+.|. ++||+..       
T Consensus        30 ~~i~wg--~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk--kKIkREikIL~nL~gg~NIi~L~DiV~Dp  105 (338)
T KOG0668|consen   30 LVIDWG--NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK--KKIKREIKILQNLRGGPNIIKLLDIVKDP  105 (338)
T ss_pred             eeeecc--ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH--HHHHHHHHHHHhccCCCCeeehhhhhcCc
Confidence            444555  34789999999999999999999999999999999976443  44778999999998 6676321       


Q ss_pred             -------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          154 -------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       154 -------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                         ++..++...++.++.|++.||+|||++||+|||+||.|++|+.                  
T Consensus       106 ~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh------------------  167 (338)
T KOG0668|consen  106 ESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH------------------  167 (338)
T ss_pred             cccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech------------------
Confidence                               2567788899999999999999999999999999999999975                  


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCccc--eecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCC-CCCCh
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF-QTHEN  290 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf-~~~~~  290 (405)
                              ....++|+|+|+|.+......+  .+.+..|--||++..- .|+..-|+|||||++..|+..+-|| .|.++
T Consensus       168 --------~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN  239 (338)
T KOG0668|consen  168 --------ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  239 (338)
T ss_pred             --------hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence                    3456899999999988776544  5678899999999875 4889999999999999999977765 78899


Q ss_pred             HHHHHHHHHHhCCCCh-HHHHH----hhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhh-hcccCchHHHHH
Q 015532          291 LEHLAMMERVLGPLPH-HMVIR----ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM-QHVDHSAGDLID  364 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~  364 (405)
                      .+++..|.+++|.-.- .++.+    .+...........+..|.                   .+.. +...-.++++.|
T Consensus       240 ~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~-------------------~Fi~~~n~hl~~peaiD  300 (338)
T KOG0668|consen  240 YDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWS-------------------RFINSENQHLVSPEAID  300 (338)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHH-------------------HhCCccccccCChHHHH
Confidence            9999999999986210 00000    011111111122222221                   1111 111234689999


Q ss_pred             HHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          365 LLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ||.++|.+|.++|+||.|++.||||..-
T Consensus       301 lldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  301 LLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             HHHHHHhhccccccchHHHhcCchHHHH
Confidence            9999999999999999999999999753

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.6e-39  Score=309.72  Aligned_cols=221  Identities=24%  Similarity=0.397  Sum_probs=166.7

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|++..+++.||||++++..    .....+..|+.++..+ .|+++....                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46999999999999999999999999997532    2234567899999988 577763211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~--------------------------  134 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGH--------------------------  134 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--------------------------
Confidence                     235789999999999999999999999999999999999976654                          


Q ss_pred             CceeccCCCCccc---cCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHH
Q 015532          226 AIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-----HLAMM  297 (405)
Q Consensus       226 ~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~-----~~~~i  297 (405)
                       ++|+|||++...   .......+||..|+|||++.+..++.++|||||||++|+|++|..||......+     ....+
T Consensus       135 -~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~  213 (329)
T cd05588         135 -IKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL  213 (329)
T ss_pred             -EEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHH
Confidence             555556555421   112233579999999999999899999999999999999999999996321100     00000


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+                                        .+.      ......+..++..+.+||.+||+.||++|
T Consensus       214 ~~----------------------------------------~~~------~~~~~~p~~~~~~~~~li~~~L~~dP~~R  247 (329)
T cd05588         214 FQ----------------------------------------VIL------EKQIRIPRSLSVKASSVLKGFLNKDPKER  247 (329)
T ss_pred             HH----------------------------------------HHH------cCCCCCCCCCCHHHHHHHHHHhccCHHHc
Confidence            00                                        000      00001123456789999999999999999


Q ss_pred             CC------HHHHHcCCCCCC
Q 015532          378 LK------AREALRHPFFTR  391 (405)
Q Consensus       378 pt------a~elL~hp~f~~  391 (405)
                      +|      ++++++||||..
T Consensus       248 ~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         248 LGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             CCCCCCCCHHHHhcCCCCCC
Confidence            97      799999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=5.9e-39  Score=299.22  Aligned_cols=249  Identities=31%  Similarity=0.491  Sum_probs=181.0

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCC----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGT----------------  153 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~----------------  153 (405)
                      +|++.+.||+|+||.||+|++..+|+.||+|.++...   .....+.+|+.+++.+.|+++...                
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            5899999999999999999999999999999986432   223456789999999999987321                


Q ss_pred             -----------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          154 -----------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       154 -----------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                 ....+++..++.++.||+.||.|||++||+||||||+||+++.++.++++||                 
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~df-----------------  143 (284)
T cd07839          81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADF-----------------  143 (284)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECcc-----------------
Confidence                       0234788999999999999999999999999999999999987665555554                 


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCC-CCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALF-QTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf-~~~~~~~~~~~i  297 (405)
                                |++......   .....++..|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+..+.+..+
T Consensus       144 ----------g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~  213 (284)
T cd07839         144 ----------GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  213 (284)
T ss_pred             ----------chhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHH
Confidence                      444322211   11235688999999987754 789999999999999999988774 555556666667


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+.++..+............ +      ..++...              ......+.....++++.+||.+||+.||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  272 (284)
T cd07839         214 FRLLGTPTEESWPGVSKLPD-Y------KPYPMYP--------------ATTSLVNVVPKLNSTGRDLLQNLLVCNPVQR  272 (284)
T ss_pred             HHHhCCCChHHhHHhhhccc-c------cccCCCC--------------CcchhhhhcccCCHHHHHHHHHHhcCChhhc
Confidence            66666655433221110000 0      0000000              0000011223467789999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||++++++||||
T Consensus       273 ~t~~~il~h~~f  284 (284)
T cd07839         273 ISAEEALQHPYF  284 (284)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2e-39  Score=302.11  Aligned_cols=221  Identities=23%  Similarity=0.340  Sum_probs=168.7

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCCCCC----------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGT----------------------  153 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~~~~----------------------  153 (405)
                      ||+|+||+||+|.+..+++.||+|++.....    ..+.+..|+.+++.+.|+++...                      
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            7999999999999999999999999864321    22456789999999998876321                      


Q ss_pred             ---------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          154 ---------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       154 ---------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                               ....+++..+..++.||+.||.|||++||+||||||+||+++.++.                         
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~-------------------------  135 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGN-------------------------  135 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-------------------------
Confidence                     0134788899999999999999999999999999999999976554                         


Q ss_pred             CCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          225 SAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                        ++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+....
T Consensus       136 --~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  213 (280)
T cd05608         136 --VRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI  213 (280)
T ss_pred             --EEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence              556666655432221   123468999999999999999999999999999999999999997654321111111100


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC---
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL---  378 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp---  378 (405)
                      ..                                              ........++..+.+|+.+||+.||++|+   
T Consensus       214 ~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  247 (280)
T cd05608         214 LN----------------------------------------------DSVTYPDKFSPASKSFCEALLAKDPEKRLGFR  247 (280)
T ss_pred             cc----------------------------------------------cCCCCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence            00                                              00011234577899999999999999999   


Q ss_pred             --CHHHHHcCCCCCCCC
Q 015532          379 --KAREALRHPFFTRDV  393 (405)
Q Consensus       379 --ta~elL~hp~f~~~~  393 (405)
                        |++++++||||++..
T Consensus       248 ~~~~~~~l~h~~~~~~~  264 (280)
T cd05608         248 DGNCDGLRTHPLFRDLN  264 (280)
T ss_pred             CCCHHHHhcChhhhcCC
Confidence              899999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-41  Score=315.57  Aligned_cols=234  Identities=29%  Similarity=0.443  Sum_probs=192.1

Q ss_pred             cCCCeEE--EeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCC-----------
Q 015532           90 LTPRYRI--LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT-----------  153 (405)
Q Consensus        90 ~~~~y~~--~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~-----------  153 (405)
                      +..-|+|  .++||+|.||+||-|+++.+|+.||||+|.+.   .+..+...+|+.||+.+.||.++..           
T Consensus       560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervF  639 (888)
T KOG4236|consen  560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVF  639 (888)
T ss_pred             HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEE
Confidence            4445776  47999999999999999999999999999653   3445778889999999999987421           


Q ss_pred             -----------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          154 -----------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       154 -----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                       -.+.+++...+.++.||+.||.|||.++|+|+||||+|||+.+.                   
T Consensus       640 VVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~-------------------  700 (888)
T KOG4236|consen  640 VVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA-------------------  700 (888)
T ss_pred             EEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC-------------------
Confidence                             13678999999999999999999999999999999999999763                   


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                           +.-.++||||||+|+.+....  .+++||+.|+|||++.+.+|+..-|+||.|||+|.-++|..||..+.+.  -
T Consensus       701 -----~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--n  773 (888)
T KOG4236|consen  701 -----SPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--N  773 (888)
T ss_pred             -----CCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch--h
Confidence                 244579999999999877653  4579999999999999999999999999999999999999999765443  2


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      .+|.....-                        +|.                      +-+.+++..++|||.++|++.=
T Consensus       774 dQIQNAaFM------------------------yPp----------------------~PW~eis~~AidlIn~LLqVkm  807 (888)
T KOG4236|consen  774 DQIQNAAFM------------------------YPP----------------------NPWSEISPEAIDLINNLLQVKM  807 (888)
T ss_pred             HHhhccccc------------------------cCC----------------------CchhhcCHHHHHHHHHHHHHHH
Confidence            333322111                        111                      1224567899999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~  395 (405)
                      ++|+|.++.|.|||+++...+
T Consensus       808 ~kRysvdk~lsh~Wlq~yq~w  828 (888)
T KOG4236|consen  808 RKRYSVDKSLSHPWLQDYQTW  828 (888)
T ss_pred             HHhcchHhhccchhhhcchHH
Confidence            999999999999999986543

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.1e-39  Score=308.25  Aligned_cols=271  Identities=22%  Similarity=0.317  Sum_probs=182.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++.++||+|+||.||+|.+..++..||+|+++..  ....+.+.+|+++++.+.|+++....              
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            46899999999999999999999999999999998643  23346688999999999999874321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                   ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.                     
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~---------------------  142 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---------------------  142 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCC---------------------
Confidence                         12467788899999999999999975 7999999999999976654                     


Q ss_pred             CCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                            +||+|||++...... .....||..|+|||++.+..++.++|||||||++|+|++|+.||......+....+..
T Consensus       143 ------~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  216 (333)
T cd06650         143 ------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGC  216 (333)
T ss_pred             ------EEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcC
Confidence                  566666665433221 2234789999999999988899999999999999999999999987654333222211


Q ss_pred             H-hCCCChHHHHHhhHhhHHhhhcCCcccC-CCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          300 V-LGPLPHHMVIRADRRAEKYFRRGARLDW-PDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       300 ~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      . .+..+...........     ......+ +..... .......................+.++.+||.+||++||++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R  290 (333)
T cd06650         217 PVEGDPAESETSPRPRPP-----GRPLSSYGPDSRPP-MAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAER  290 (333)
T ss_pred             cccCCccccccCcccCCc-----cchhhhhccccccc-ccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccC
Confidence            1 1111000000000000     0000000 000000 000000000000000000112346789999999999999999


Q ss_pred             CCHHHHHcCCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDVR  394 (405)
Q Consensus       378 pta~elL~hp~f~~~~~  394 (405)
                      ||++|+++||||+....
T Consensus       291 pt~~ell~h~~~~~~~~  307 (333)
T cd06650         291 ADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             cCHHHHhhCHHHhcCcc
Confidence            99999999999987643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-38  Score=305.10  Aligned_cols=258  Identities=31%  Similarity=0.534  Sum_probs=194.7

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|.+.+.||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.+.|+++....            
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~   92 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF   92 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence            457899999999999999999999999999999998642   22334577899999999999874211            


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.|++.||.|||++||+||||||+||+++.++                  
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~------------------  154 (342)
T cd07879          93 QDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC------------------  154 (342)
T ss_pred             ceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC------------------
Confidence                              12578889999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                               .++|+|||++...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus       155 ---------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~  225 (342)
T cd07879         155 ---------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT  225 (342)
T ss_pred             ---------CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                     4566666666554433344577889999999876 458899999999999999999999999888777777


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccch-hhhhhcccCchHHHHHHHHHccccCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      .+....+..+..+...........+....                    ...+ ..........+..+.+||.+||+.||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  285 (342)
T cd07879         226 QILKVTGVPGPEFVQKLEDKAAKSYIKSL--------------------PKYPRKDFSTLFPKASPQAVDLLEKMLELDV  285 (342)
T ss_pred             HHHHhcCCCCHHHHHHhcccchHHHHhhc--------------------CCcccchHHHHhcCCCHHHHHHHHHHcCCCh
Confidence            77777776665554333211110000000                    0000 00001112346688999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~  394 (405)
                      ++|||+++++.||||+....
T Consensus       286 ~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         286 DKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             hhCcCHHHHhcCcchhhccc
Confidence            99999999999999987543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=5.9e-39  Score=294.86  Aligned_cols=226  Identities=33%  Similarity=0.570  Sum_probs=175.8

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhH---HHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~---~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      |++.+.||+|+||+||+|++..+++.||+|++........   ...+|+.+++.+.|+++....                
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            8999999999999999999999999999999976543332   234599999999998874211                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++.++..++.||+.||.+||++||+|+||||+||+++.++.                        
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~------------------------  136 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGE------------------------  136 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSE------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc------------------------
Confidence                       245788999999999999999999999999999999999976554                        


Q ss_pred             CCCceeccCCCCccc---cCCccceecCCCcchhHHHh-CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                         ++|+|||.+...   ........++..|+|||++. +..++.++||||||+++|+|++|..||......+....+.+
T Consensus       137 ---~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~  213 (260)
T PF00069_consen  137 ---VKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEK  213 (260)
T ss_dssp             ---EEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHH
T ss_pred             ---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence               566666666431   12223357899999999998 77899999999999999999999999988754444444433


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .......                                           ............+.++|.+||+.||++|||
T Consensus       214 ~~~~~~~-------------------------------------------~~~~~~~~~~~~l~~li~~~l~~~p~~R~~  250 (260)
T PF00069_consen  214 ILKRPLP-------------------------------------------SSSQQSREKSEELRDLIKKMLSKDPEQRPS  250 (260)
T ss_dssp             HHHTHHH-------------------------------------------HHTTSHTTSHHHHHHHHHHHSSSSGGGSTT
T ss_pred             ccccccc-------------------------------------------ccccccchhHHHHHHHHHHHccCChhHCcC
Confidence            2211000                                           000001112368999999999999999999


Q ss_pred             HHHHHcCCCC
Q 015532          380 AREALRHPFF  389 (405)
Q Consensus       380 a~elL~hp~f  389 (405)
                      +.++++||||
T Consensus       251 ~~~l~~~~~~  260 (260)
T PF00069_consen  251 AEELLKHPWF  260 (260)
T ss_dssp             HHHHHTSGGG
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.5e-39  Score=308.32  Aligned_cols=222  Identities=23%  Similarity=0.384  Sum_probs=166.1

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|++..+++.||+|++++..    .....+..|+.++..+ .|+++....                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            47999999999999999999999999997532    2234566788888877 677764321                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~--------------------------  134 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--------------------------  134 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCC--------------------------
Confidence                     235788899999999999999999999999999999999976654                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHH
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-----HLAMM  297 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~-----~~~~i  297 (405)
                       ++|+|||++....   .......||..|+|||++.+..++.++|||||||++|+|++|..||.......     ....+
T Consensus       135 -~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~  213 (329)
T cd05618         135 -IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL  213 (329)
T ss_pred             -EEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHH
Confidence             5566666554321   11233579999999999999899999999999999999999999995321100     00000


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+.                                        +.      ......+...+..+.+||.+||+.||++|
T Consensus       214 ~~~----------------------------------------i~------~~~~~~p~~~~~~~~~ll~~~L~~dP~~R  247 (329)
T cd05618         214 FQV----------------------------------------IL------EKQIRIPRSLSVKAASVLKSFLNKDPKER  247 (329)
T ss_pred             HHH----------------------------------------Hh------cCCCCCCCCCCHHHHHHHHHHhcCCHHHc
Confidence            000                                        00      00001123456788999999999999999


Q ss_pred             CC------HHHHHcCCCCCCC
Q 015532          378 LK------AREALRHPFFTRD  392 (405)
Q Consensus       378 pt------a~elL~hp~f~~~  392 (405)
                      +|      +.++++||||+..
T Consensus       248 ~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         248 LGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             CCCCCCCCHHHHhcCCCCCCC
Confidence            98      5899999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.6e-39  Score=308.97  Aligned_cols=218  Identities=28%  Similarity=0.413  Sum_probs=168.4

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHH-HHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~-il~~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||+||+|++..+++.||||++....    .....+..|.. +++.+.|+++....                  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            47999999999999999999999999996432    12233445544 56778898874321                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~--------------------------  134 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGH--------------------------  134 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc--------------------------
Confidence                     135678899999999999999999999999999999999976654                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.....
T Consensus       135 -~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  213 (323)
T cd05575         135 -VVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL  213 (323)
T ss_pred             -EEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC
Confidence             5556666554321   112235799999999999998999999999999999999999999988765554443322100


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH--
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA--  380 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta--  380 (405)
                                                                        ......+..+.+||.+||+.||++|+++  
T Consensus       214 --------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (323)
T cd05575         214 --------------------------------------------------RLKPNISVSARHLLEGLLQKDRTKRLGAKD  243 (323)
T ss_pred             --------------------------------------------------CCCCCCCHHHHHHHHHHhhcCHHhCCCCCC
Confidence                                                              0112346689999999999999999987  


Q ss_pred             --HHHHcCCCCCCC
Q 015532          381 --REALRHPFFTRD  392 (405)
Q Consensus       381 --~elL~hp~f~~~  392 (405)
                        .++++||||...
T Consensus       244 ~~~~il~~~~~~~~  257 (323)
T cd05575         244 DFLEIKNHVFFSSI  257 (323)
T ss_pred             CHHHHHcCCCcCCC
Confidence              699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.4e-41  Score=289.12  Aligned_cols=269  Identities=26%  Similarity=0.467  Sum_probs=196.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc---hhhhhHHHHHHHHHHHHHhhcCCCC---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGG---------------  152 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~il~~l~~~~~~~---------------  152 (405)
                      .+.|+-..+||+|.||.||+|+.+.+++.||+|++--   ........++|+.+|+.|.|+++..               
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~   95 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD   95 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence            4568888999999999999999999999999997632   3456678899999999999998621               


Q ss_pred             --------------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          153 --------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       153 --------------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                          .....|+..++++++.+++.||.|+|++.|+|||+|++|+||+.+|.+|++|||++..++
T Consensus        96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs  175 (376)
T KOG0669|consen   96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS  175 (376)
T ss_pred             cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence                                112457889999999999999999999999999999999999877755555444432211


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                      ....                    ......+..+-|.+|++||.+.|. .|+++.|||..|||+.||+++.+.|.+.++.
T Consensus       176 ~~~n--------------------~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq  235 (376)
T KOG0669|consen  176 TSKN--------------------VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ  235 (376)
T ss_pred             cccc--------------------cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH
Confidence            1100                    000112234679999999999986 5999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .++..|..++|....+.+...+.......  ....+.+.     ...+.      ..+....+.  ..+++.||+.+||.
T Consensus       236 qql~~Is~LcGs~tkevWP~~d~lpL~~s--ie~ePl~~-----~~~rk------v~n~~kp~~--kd~~a~dLle~ll~  300 (376)
T KOG0669|consen  236 QQLHLISQLCGSITKEVWPNVDNLPLYQS--IELEPLPK-----GQKRK------VKNRLKPYV--KDDEALDLLEKLLK  300 (376)
T ss_pred             HHHHHHHHHhccCCcccCCCcccchHHHh--ccCCCCCc-----chhhh------hhhhccccc--CChhHHHHHHHHhc
Confidence            99999999999877655433221111000  00000111     00010      111111111  14578899999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      +||.+|++++++|+|.||..+..
T Consensus       301 ~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  301 LDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             cCcccCcchHhhhchhhhhcCCc
Confidence            99999999999999999988643

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.8e-38  Score=296.07  Aligned_cols=249  Identities=30%  Similarity=0.513  Sum_probs=183.2

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .|++.+.||+|+||.||+|++..+++.||||+++...   .....+.+|+.+++.+.|+++....               
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4899999999999999999999999999999986432   2335677899999999998873211               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+||+++.++.++++|||              
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg--------------  146 (285)
T cd07861          81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFG--------------  146 (285)
T ss_pred             CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECccc--------------
Confidence                          1357889999999999999999999999999999999999877655555555              


Q ss_pred             CCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                                   ++......   .....++..|+|||++.+. .++.++|||||||++|+|++|.+||.+....+....
T Consensus       147 -------------~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~  213 (285)
T cd07861         147 -------------LARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFR  213 (285)
T ss_pred             -------------ceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence                         43322111   1123568889999998764 478999999999999999999999998887777766


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+..+......+..... ...+...                   ..... ..........+++++.+||.+||+.||++
T Consensus       214 ~~~~~~~~~~~~~~~~~~-~~~~~~~-------------------~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~  272 (285)
T cd07861         214 IFRILGTPTEDVWPGVTS-LPDYKNT-------------------FPKWK-KGSLRSAVKNLDEDGLDLLEKMLIYDPAK  272 (285)
T ss_pred             HHHHhCCCChhhhhcchh-hHHHHhh-------------------ccccC-cchhHHhcCCCCHHHHHHHHHHhcCChhh
Confidence            666666544333211110 0011000                   00000 00011122346788999999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 015532          377 RLKAREALRHPFF  389 (405)
Q Consensus       377 Rpta~elL~hp~f  389 (405)
                      |||+.++++||||
T Consensus       273 Rpt~~~ll~~~~~  285 (285)
T cd07861         273 RISAKKALNHPYF  285 (285)
T ss_pred             CCCHHHHhcCCCC
Confidence            9999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.2e-38  Score=303.59  Aligned_cols=257  Identities=29%  Similarity=0.523  Sum_probs=196.9

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+.+++.+.|+++....           
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            3567899999999999999999999999999999998542   22345677899999999999874211           


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+||+++.++                
T Consensus        92 ~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~----------------  155 (343)
T cd07880          92 FHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC----------------  155 (343)
T ss_pred             cceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC----------------
Confidence                                13578889999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                                 .++|+|||.+...........+++.|+|||++.+ ..++.++|+|||||++|+|++|..||.+.+....
T Consensus       156 -----------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~  224 (343)
T cd07880         156 -----------ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ  224 (343)
T ss_pred             -----------CEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                       4566666666554444444567889999999876 3588999999999999999999999998887777


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhH-HhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAE-KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ...+....+..|..+......... .+.......                    ............++.+.++|.+||+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~li~~~l~~  284 (343)
T cd07880         225 LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRF--------------------RKKDFRSLLPNANPLAVNVLEKMLVL  284 (343)
T ss_pred             HHHHHHhcCCCCHHHHHhhcchhHHHHHHhcccc--------------------CcchHHHhccCCChHHHHHHHHHcCC
Confidence            777777777777665443321111 110000000                    00011122345677899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~  392 (405)
                      ||++|||+.++++||||+..
T Consensus       285 dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         285 DAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             ChhhCCCHHHHhcCccHhhh
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-40  Score=311.46  Aligned_cols=225  Identities=26%  Similarity=0.389  Sum_probs=187.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ..|.-++.||.|+||.||-|++..+.+.||||.+....    ..-.+++.|+.+|+++.|||.+...             
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM  105 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM  105 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence            45788899999999999999999999999999996432    2235678899999999999986543             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+.+.++..|+.+.+.||.|||+++.||||||..|||++..|                      
T Consensus       106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g----------------------  163 (948)
T KOG0577|consen  106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG----------------------  163 (948)
T ss_pred             HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC----------------------
Confidence                          24567788889999999999999999999999999999987655                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           .|||+|||+|..... ..+++|||+|||||++..   +.|+-++|||||||+..||...++|+-..+....+..|
T Consensus       164 -----~VKLaDFGSAsi~~P-AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI  237 (948)
T KOG0577|consen  164 -----LVKLADFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI  237 (948)
T ss_pred             -----eeeeccccchhhcCc-hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH
Confidence                 578888888766543 345799999999999974   46999999999999999999999999888887777777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+...|.                                             +   ....++..|++|+..||+.-|++|
T Consensus       238 AQNesPt---------------------------------------------L---qs~eWS~~F~~Fvd~CLqKipqeR  269 (948)
T KOG0577|consen  238 AQNESPT---------------------------------------------L---QSNEWSDYFRNFVDSCLQKIPQER  269 (948)
T ss_pred             HhcCCCC---------------------------------------------C---CCchhHHHHHHHHHHHHhhCcccC
Confidence            6532211                                             0   013457799999999999999999


Q ss_pred             CCHHHHHcCCCCCCC
Q 015532          378 LKAREALRHPFFTRD  392 (405)
Q Consensus       378 pta~elL~hp~f~~~  392 (405)
                      ||.+++|.|+|+...
T Consensus       270 ptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  270 PTSEELLKHRFVLRE  284 (948)
T ss_pred             CcHHHHhhcchhccC
Confidence            999999999999986

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=5.3e-39  Score=310.84  Aligned_cols=231  Identities=23%  Similarity=0.387  Sum_probs=177.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..++|++.+.||+|+||.||+|+++.+++.||+|++....    .....+..|+.+++.+.|+++....           
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            3478999999999999999999999999999999986422    2234466899999999999874321           


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                    
T Consensus       121 v~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~--------------------  180 (371)
T cd05622         121 VMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH--------------------  180 (371)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCC--------------------
Confidence                           124678889999999999999999999999999999999976554                    


Q ss_pred             CCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCC----CCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                             +||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|+|++|..||.+.+..
T Consensus       181 -------ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~  253 (371)
T cd05622         181 -------LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV  253 (371)
T ss_pred             -------EEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH
Confidence                   566666665433221    12357999999999997643    789999999999999999999999887765


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+......                      ..++                        ....++..+.+||.+||+
T Consensus       254 ~~~~~i~~~~~~----------------------~~~~------------------------~~~~~s~~~~~li~~~L~  287 (371)
T cd05622         254 GTYSKIMNHKNS----------------------LTFP------------------------DDNDISKEAKNLICAFLT  287 (371)
T ss_pred             HHHHHHHcCCCc----------------------ccCC------------------------CcCCCCHHHHHHHHHHcC
Confidence            544443321100                      0111                        112457789999999998


Q ss_pred             cCCCC--CCCHHHHHcCCCCCCCC
Q 015532          372 YDPAE--RLKAREALRHPFFTRDV  393 (405)
Q Consensus       372 ~dP~~--Rpta~elL~hp~f~~~~  393 (405)
                      .++.+  |++++|+++|+||++..
T Consensus       288 ~~~~r~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         288 DREVRLGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             ChhhhcCCCCHHHHhcCcccCCCC
Confidence            44433  78999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1e-38  Score=301.47  Aligned_cols=255  Identities=30%  Similarity=0.455  Sum_probs=187.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---hhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++....   ......+|+.+++++.|+++....             
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            3579999999999999999999999999999999864321   223456799999999998873211             


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++|++||||||+||+++.++.+                  
T Consensus        86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~------------------  147 (309)
T cd07845          86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCL------------------  147 (309)
T ss_pred             EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE------------------
Confidence                            1346788999999999999999999999999999999999876654                  


Q ss_pred             cCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                               +|+|||.+......   .....++..|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+.+
T Consensus       148 ---------kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~  218 (309)
T cd07845         148 ---------KIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQL  218 (309)
T ss_pred             ---------EECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                     55555544432211   112345778999999876 45789999999999999999999999998888888


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+....+..+..++........     ......+...              .. .........++.+.+||.+||++||
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--------------~~-~~~~~~~~~~~~~~~li~~ml~~dp  278 (309)
T cd07845         219 DLIIQLLGTPNESIWPGFSDLPL-----VGKFTLPKQP--------------YN-NLKHKFPWLSEAGLRLLNFLLMYDP  278 (309)
T ss_pred             HHHHHhcCCCChhhchhhhcccc-----cccccccCCC--------------CC-chHHhccccCHHHHHHHHHHhcCCh
Confidence            88888777655443221110000     0000000000              00 0001112346788999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRD  392 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~  392 (405)
                      ++|||++|+++||||++.
T Consensus       279 ~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         279 KKRATAEEALESSYFKEK  296 (309)
T ss_pred             hhCcCHHHHhcChhhccC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.8e-40  Score=310.15  Aligned_cols=223  Identities=31%  Similarity=0.537  Sum_probs=192.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|.+++.+|+|+||.+++++++..+..|++|.++..   ...+..+..|+.+++++.||+|+...              
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            5799999999999999999999999999999999643   34455788999999999999984322              


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...|+++.+..++.||+.||.|||+++|+|||||+.||+++.++                    
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--------------------  143 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--------------------  143 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--------------------
Confidence                            24689999999999999999999999999999999999986544                    


Q ss_pred             cCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                             .|+|.|||+|+......   .+++||+.||+||++.+.+|+.|+|||||||++|||++-+++|.+.+......
T Consensus       144 -------~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~  216 (426)
T KOG0589|consen  144 -------KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELIL  216 (426)
T ss_pred             -------ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHH
Confidence                   56888888887665543   45799999999999999999999999999999999999999999988888887


Q ss_pred             HHHHHh-CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          296 MMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       296 ~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      .|.+.. .++|                                                  ..++.+++.+|..||..+|
T Consensus       217 ki~~~~~~Plp--------------------------------------------------~~ys~el~~lv~~~l~~~P  246 (426)
T KOG0589|consen  217 KINRGLYSPLP--------------------------------------------------SMYSSELRSLVKSMLRKNP  246 (426)
T ss_pred             HHhhccCCCCC--------------------------------------------------ccccHHHHHHHHHHhhcCC
Confidence            776654 2332                                                  3457789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCC
Q 015532          375 AERLKAREALRHPFFTR  391 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~  391 (405)
                      +.||+|.++|.+|.+..
T Consensus       247 ~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  247 EHRPSALELLRRPHLLR  263 (426)
T ss_pred             ccCCCHHHHhhChhhhh
Confidence            99999999999988873

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=4.9e-39  Score=300.25  Aligned_cols=227  Identities=27%  Similarity=0.405  Sum_probs=173.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|++.+.||+|+||.||+|.+..+++.||||.+....    .....+..|+.+++.++|+++....              
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            3788899999999999999999999999999986432    1234466899999999998773211              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.|++.||.|||++||+||||||+||+++.++.                    
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~--------------------  140 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGH--------------------  140 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC--------------------
Confidence                           124778889999999999999999999999999999999976554                    


Q ss_pred             CCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                             ++|+|||++.......  ....|+..|+|||++.+..++.++||||+||++|+|++|..||............
T Consensus       141 -------~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~  213 (285)
T cd05630         141 -------IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV  213 (285)
T ss_pred             -------EEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH
Confidence                   5666666554332211  1246899999999999888999999999999999999999999765432111111


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .......                                              ........++.+.+|+.+||+.||++|
T Consensus       214 ~~~~~~~----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R  247 (285)
T cd05630         214 ERLVKEV----------------------------------------------QEEYSEKFSPDARSLCKMLLCKDPKER  247 (285)
T ss_pred             Hhhhhhh----------------------------------------------hhhcCccCCHHHHHHHHHHhhcCHHHc
Confidence            1100000                                              001123456788999999999999999


Q ss_pred             CC-----HHHHHcCCCCCCC
Q 015532          378 LK-----AREALRHPFFTRD  392 (405)
Q Consensus       378 pt-----a~elL~hp~f~~~  392 (405)
                      +|     ++|+++||||++-
T Consensus       248 ~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         248 LGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             cCCCCCchHHHHcChhhhcc
Confidence            99     9999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.2e-39  Score=309.26  Aligned_cols=218  Identities=29%  Similarity=0.425  Sum_probs=172.6

Q ss_pred             eeeecccceeEEEEEec---CCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           98 SKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      +.||+|+||.||++++.   .+++.||+|+++...   ........|+++++++.|+++....                 
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            67999999999999863   578999999997533   2334566799999999999884321                 


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                         
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-------------------------  136 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-------------------------  136 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCc-------------------------
Confidence                      134788999999999999999999999999999999999976554                         


Q ss_pred             CCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          225 SAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                        ++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.+..
T Consensus       137 --~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~  214 (318)
T cd05582         137 --IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK  214 (318)
T ss_pred             --EEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC
Confidence              566666665433222   123578999999999998889999999999999999999999998877655554443211


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC--
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK--  379 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt--  379 (405)
                      ..                                                  .+...++.+.+||.+||+.||++|||  
T Consensus       215 ~~--------------------------------------------------~p~~~~~~~~~li~~~l~~~P~~R~~a~  244 (318)
T cd05582         215 LG--------------------------------------------------MPQFLSPEAQSLLRALFKRNPANRLGAG  244 (318)
T ss_pred             CC--------------------------------------------------CCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence            11                                                  11234668899999999999999999  


Q ss_pred             ---HHHHHcCCCCCCC
Q 015532          380 ---AREALRHPFFTRD  392 (405)
Q Consensus       380 ---a~elL~hp~f~~~  392 (405)
                         ++++++||||+..
T Consensus       245 ~~~~~~~~~~~~~~~~  260 (318)
T cd05582         245 PDGVEEIKRHPFFSTI  260 (318)
T ss_pred             CCCHHHHhCCCCcCCC
Confidence               7889999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-40  Score=293.54  Aligned_cols=229  Identities=28%  Similarity=0.439  Sum_probs=187.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCC-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDI-----------------  150 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~-----------------  150 (405)
                      +.|..+++||+|.||+|.+|+.+.+++.||||++++.-.    ....-+.|-.+|+...||.+                 
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            568999999999999999999999999999999976432    22334568889999999865                 


Q ss_pred             ----CCCc------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          151 ----GGTR------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       151 ----~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                          ++.+      ...|+++.++.+..+|+.||.|||+++||.||||.+|+|++.+|++||+|||+++.....      
T Consensus       248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~------  321 (516)
T KOG0690|consen  248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY------  321 (516)
T ss_pred             EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc------
Confidence                1222      356889999999999999999999999999999999999988887766666655433221      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                                        .....++||||.|+|||++....|+.++|+|.+||++|||++|+.||...+....+..|...
T Consensus       322 ------------------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e  383 (516)
T KOG0690|consen  322 ------------------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME  383 (516)
T ss_pred             ------------------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh
Confidence                              12334579999999999999999999999999999999999999999988877776665432


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC--
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL--  378 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp--  378 (405)
                      .-.+                                                  +..++++++.||..+|..||.+|.  
T Consensus       384 d~kF--------------------------------------------------Pr~ls~eAktLLsGLL~kdP~kRLGg  413 (516)
T KOG0690|consen  384 DLKF--------------------------------------------------PRTLSPEAKTLLSGLLKKDPKKRLGG  413 (516)
T ss_pred             hccC--------------------------------------------------CccCCHHHHHHHHHHhhcChHhhcCC
Confidence            2222                                                  234578999999999999999998  


Q ss_pred             ---CHHHHHcCCCCCCCCC
Q 015532          379 ---KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 ---ta~elL~hp~f~~~~~  394 (405)
                         .|.||.+|+||..-.+
T Consensus       414 GpdDakEi~~h~FF~~v~W  432 (516)
T KOG0690|consen  414 GPDDAKEIMRHRFFASVDW  432 (516)
T ss_pred             CchhHHHHHhhhhhccCCH
Confidence               5899999999987654

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-38  Score=303.39  Aligned_cols=229  Identities=26%  Similarity=0.403  Sum_probs=173.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.||||++++..    ...+.+..|+.++..+.|+++....             
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            36999999999999999999999999999999996532    2234567899999999998873211             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||+|||++||+||||||+|||++.++                     
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~---------------------  139 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG---------------------  139 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC---------------------
Confidence                           23578889999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                            .++|+|||++.......    ...+||+.|+|||++.+     ..++.++|||||||++|+|++|+.||.+.+.
T Consensus       140 ------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~  213 (331)
T cd05597         140 ------HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL  213 (331)
T ss_pred             ------CEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence                  45666666654332211    12469999999999973     3578899999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+....+.....                      ....+                       ......+..+++||.+||
T Consensus       214 ~~~~~~i~~~~~----------------------~~~~~-----------------------~~~~~~~~~~~~li~~ll  248 (331)
T cd05597         214 VETYGKIMNHKE----------------------HFQFP-----------------------PDVTDVSEEAKDLIRRLI  248 (331)
T ss_pred             HHHHHHHHcCCC----------------------cccCC-----------------------CccCCCCHHHHHHHHHHc
Confidence            554443321100                      00000                       011235678999999999


Q ss_pred             ccCCCC--CCCHHHHHcCCCCCCC
Q 015532          371 RYDPAE--RLKAREALRHPFFTRD  392 (405)
Q Consensus       371 ~~dP~~--Rpta~elL~hp~f~~~  392 (405)
                      ..++++  |++++++++||||.+.
T Consensus       249 ~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         249 CSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             cCcccccCCCCHHHHhcCCCCCCC
Confidence            765544  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.7e-38  Score=328.50  Aligned_cols=250  Identities=26%  Similarity=0.447  Sum_probs=188.9

Q ss_pred             EeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        84 ~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      +..++.+.++|+++++||+|+||+||+|++..+++.||+|++...   ......+..|+.+|+.|.|++++...      
T Consensus         5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de   84 (1021)
T PTZ00266          5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK   84 (1021)
T ss_pred             ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence            455677788999999999999999999999999999999998642   23456678899999999999874311      


Q ss_pred             ---------------------------cccCCHHHHHHHHHHHHHHHHHHHHC-------CcEecCCCCCcEEEeccccc
Q 015532          155 ---------------------------YRSFPIDLVRELGRQLLESVAFMHEL-------RLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       155 ---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~-------givHrDlkp~NIli~~~~~~  200 (405)
                                                 ...+++..++.|+.||+.||.|||+.       +||||||||+||||+.... 
T Consensus        85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~-  163 (1021)
T PTZ00266         85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR-  163 (1021)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc-
Confidence                                       13478889999999999999999984       4999999999999975321 


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCC--CCCCchhHHHHHHHHH
Q 015532          201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILV  276 (405)
Q Consensus       201 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~  276 (405)
                      .+.+...         .....+....+||+|||++.......  ....||+.|+|||++.+.  .++.++||||||||+|
T Consensus       164 ~lg~i~~---------~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILY  234 (1021)
T PTZ00266        164 HIGKITA---------QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIY  234 (1021)
T ss_pred             ccccccc---------cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHH
Confidence            1111000         00112334568999999987653322  235799999999999753  4889999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhccc
Q 015532          277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  356 (405)
Q Consensus       277 ~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (405)
                      +|++|..||........+.........+                                                 ...
T Consensus       235 ELLTGk~PF~~~~~~~qli~~lk~~p~l-------------------------------------------------pi~  265 (1021)
T PTZ00266        235 ELCSGKTPFHKANNFSQLISELKRGPDL-------------------------------------------------PIK  265 (1021)
T ss_pred             HHHHCCCCCCcCCcHHHHHHHHhcCCCC-------------------------------------------------CcC
Confidence            9999999998665544332221110000                                                 011


Q ss_pred             CchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       357 ~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ..+.++.+||..||..+|++|||+.|+|.|+||+..
T Consensus       266 ~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        266 GKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             CCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            235689999999999999999999999999999854

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.8e-38  Score=296.50  Aligned_cols=228  Identities=25%  Similarity=0.354  Sum_probs=177.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .|+..+.||+|+||+||+|.+..+++.||+|++....    .....+.+|+++++.+.|+++....              
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            3788899999999999999999999999999986532    2234467899999999998873211              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.|++.||.|||++||+||||||+||+++.++                     
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~---------------------  139 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG---------------------  139 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC---------------------
Confidence                           12478889999999999999999999999999999999997654                     


Q ss_pred             CCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            .++|+|||++......  .....|+..|+|||++.+..++.++|+|||||++|+|++|..||.+.........+
T Consensus       140 ------~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~  213 (285)
T cd05632         140 ------HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV  213 (285)
T ss_pred             ------CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                  4566666665433221  12346899999999999888999999999999999999999999876654433333


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ........                                              .......+..+.+|+.+||+.||++|
T Consensus       214 ~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~~P~~R  247 (285)
T cd05632         214 DRRVLETE----------------------------------------------EVYSAKFSEEAKSICKMLLTKDPKQR  247 (285)
T ss_pred             HHhhhccc----------------------------------------------cccCccCCHHHHHHHHHHccCCHhHc
Confidence            22111000                                              01112346678999999999999999


Q ss_pred             CC-----HHHHHcCCCCCCCC
Q 015532          378 LK-----AREALRHPFFTRDV  393 (405)
Q Consensus       378 pt-----a~elL~hp~f~~~~  393 (405)
                      ||     +.++++|+||+.-.
T Consensus       248 ~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         248 LGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             CCCcccChHHHHcChhhhcCC
Confidence            99     89999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=4.4e-38  Score=300.88  Aligned_cols=255  Identities=29%  Similarity=0.506  Sum_probs=191.5

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +..+|++.+.||+|+||+||+|++..+++.||||.++..   .........|+.+++.+.|+++....            
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            456899999999999999999999999999999998642   22334567899999999999874211            


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.||+.||.|||++|++||||||+||+++.++.                
T Consensus        83 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~----------------  146 (337)
T cd07858          83 DVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD----------------  146 (337)
T ss_pred             cEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC----------------
Confidence                               145788999999999999999999999999999999999976654                


Q ss_pred             CcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                                 ++|+|||++......   .....++..|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+..
T Consensus       147 -----------~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  215 (337)
T cd07858         147 -----------LKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV  215 (337)
T ss_pred             -----------EEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH
Confidence                       455555555433221   122467889999999875 46889999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCChHHHHHh-hHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchh-hhhhcccCchHHHHHHHHHc
Q 015532          292 EHLAMMERVLGPLPHHMVIRA-DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN-LIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ll~~~  369 (405)
                      .....+....+..+....... ......+.....                     .... .........+..+.+||.+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~  274 (337)
T cd07858         216 HQLKLITELLGSPSEEDLGFIRNEKARRYIRSLP---------------------YTPRQSFARLFPHANPLAIDLLEKM  274 (337)
T ss_pred             HHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcC---------------------cccccCHHHHcccCCHHHHHHHHHH
Confidence            778888888877665432111 001111110000                     0000 00111234677899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      |+.||++|||++|+++||||..-
T Consensus       275 l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         275 LVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             hcCChhhccCHHHHHcCcchhhh
Confidence            99999999999999999999763

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=6.2e-39  Score=305.24  Aligned_cols=218  Identities=28%  Similarity=0.407  Sum_probs=167.9

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHH-HHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEID-VLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~-il~~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||+||+|++..+++.||+|++.....    .......|.. +++.+.|+++....                  
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            479999999999999999999999999965321    1223334443 56778898874321                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~--------------------------  134 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH--------------------------  134 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--------------------------
Confidence                     134678888999999999999999999999999999999976554                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       ++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+.... 
T Consensus       135 -~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-  212 (325)
T cd05602         135 -IVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP-  212 (325)
T ss_pred             -EEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC-
Confidence             5666666654321   11233579999999999999899999999999999999999999998876655444332210 


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH-
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR-  381 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~-  381 (405)
                                                                       .......+..+.++|.+||+.||.+|+++. 
T Consensus       213 -------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         213 -------------------------------------------------LQLKPNITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             -------------------------------------------------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence                                                             011124567899999999999999999876 


Q ss_pred             ---HHHcCCCCCCC
Q 015532          382 ---EALRHPFFTRD  392 (405)
Q Consensus       382 ---elL~hp~f~~~  392 (405)
                         ++++|+||...
T Consensus       244 ~~~~i~~~~~~~~~  257 (325)
T cd05602         244 DFMEIKNHIFFSPI  257 (325)
T ss_pred             CHHHHhcCcccCCC
Confidence               89999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-41  Score=297.40  Aligned_cols=227  Identities=25%  Similarity=0.431  Sum_probs=185.7

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      -|.++++||+|+||.||+|.++.+|+.+|||.+.. +...++.+.||.|++++..+.++...                  
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            48889999999999999999999999999999864 34456688999999999888764322                  


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++.++..+++..+.||+|||...-||||||..|||++.+|.                         
T Consensus       113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~-------------------------  167 (502)
T KOG0574|consen  113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI-------------------------  167 (502)
T ss_pred             CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch-------------------------
Confidence                      356889999999999999999999999999999999999987765                         


Q ss_pred             CCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          225 SAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                        .||+|||.|....+   ...++.||+.|||||++..-+|+.++||||||++..||..|++||....+...+.+|    
T Consensus       168 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI----  241 (502)
T KOG0574|consen  168 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI----  241 (502)
T ss_pred             --hhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec----
Confidence              45566665544332   335578999999999999999999999999999999999999999876554333222    


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                                                                 ...+......++.+++++-||+++||..+|++|.||.
T Consensus       242 -------------------------------------------PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~  278 (502)
T KOG0574|consen  242 -------------------------------------------PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTAL  278 (502)
T ss_pred             -------------------------------------------cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHH
Confidence                                                       1112222233445688999999999999999999999


Q ss_pred             HHHcCCCCCCCCC
Q 015532          382 EALRHPFFTRDVR  394 (405)
Q Consensus       382 elL~hp~f~~~~~  394 (405)
                      ++++|||++....
T Consensus       279 ~L~~H~FiknA~g  291 (502)
T KOG0574|consen  279 RLCEHTFIKNAPG  291 (502)
T ss_pred             HHhhhhhhcCCCc
Confidence            9999999998654

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.9e-38  Score=300.88  Aligned_cols=266  Identities=27%  Similarity=0.491  Sum_probs=195.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++.+.|+++....             
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            468999999999999999999999999999999986432   2345567899999999999874311             


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+|++|||++........ 
T Consensus        84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-  162 (334)
T cd07855          84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT-  162 (334)
T ss_pred             EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc-
Confidence                             23478899999999999999999999999999999999998776555555554321110000 


Q ss_pred             ccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                                         ..........|+..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+....+..
T Consensus       163 -------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~  223 (334)
T cd07855         163 -------------------EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKL  223 (334)
T ss_pred             -------------------CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHH
Confidence                               00000112468889999999876 4588999999999999999999999999888888888


Q ss_pred             HHHHhCCCChHHHHHhhH-hhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          297 MERVLGPLPHHMVIRADR-RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      +....|.+|......... ....+....     +.               .............+..+.++|.+||+.||+
T Consensus       224 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  283 (334)
T cd07855         224 ILSVLGSPSEEVLNRIGSDRVRKYIQNL-----PR---------------KQPVPWSKIFPKASPEALDLLSQMLQFDPE  283 (334)
T ss_pred             HHHHhCCChhHhhhhhchhhHHHHHhhc-----cc---------------CCCCCHHHHcccCCHHHHHHHHHHccCChh
Confidence            888888887766433211 111111100     00               000000111234577899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~~~  396 (405)
                      +|||++++++||||.+.....
T Consensus       284 ~Rpt~~~~l~~~~~~~~~~~~  304 (334)
T cd07855         284 ERITVEQALQHPFLAQYHDPD  304 (334)
T ss_pred             hCcCHHHHHhChhhhhccCCc
Confidence            999999999999998765443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3.6e-39  Score=306.85  Aligned_cols=218  Identities=27%  Similarity=0.389  Sum_probs=168.3

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHH-HHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~-il~~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||+||+|++..+++.||||++....    .....+..|.. +++.+.|+++....                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999999999999999996532    22234445554 46778898874321                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~--------------------------  134 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGH--------------------------  134 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC--------------------------
Confidence                     235788999999999999999999999999999999999977664                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       ++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.... 
T Consensus       135 -~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~-  212 (325)
T cd05604         135 -VVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP-  212 (325)
T ss_pred             -EEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC-
Confidence             5556666554321   11233579999999999999899999999999999999999999998876555443332210 


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH--
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA--  380 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta--  380 (405)
                                                                       .......+..+.++|.+||+.||++||++  
T Consensus       213 -------------------------------------------------~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         213 -------------------------------------------------LVLRPGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             -------------------------------------------------ccCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence                                                             00112346688899999999999999976  


Q ss_pred             --HHHHcCCCCCCC
Q 015532          381 --REALRHPFFTRD  392 (405)
Q Consensus       381 --~elL~hp~f~~~  392 (405)
                        .++++||||+..
T Consensus       244 ~~~~i~~h~~f~~~  257 (325)
T cd05604         244 DFLEIQEHPFFESL  257 (325)
T ss_pred             CHHHHhcCCCcCCC
Confidence              599999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-39  Score=307.52  Aligned_cols=217  Identities=28%  Similarity=0.451  Sum_probs=164.9

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHH---hhcCCCCCc------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRL---ARHDIGGTR------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l---~~~~~~~~~------------------  154 (405)
                      ||+|+||+||+|++..+++.||||++.+...    .......|..++..+   .|+++....                  
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            7999999999999999999999999964322    122344577777766   466653211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~--------------------------  134 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGH--------------------------  134 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--------------------------
Confidence                     235788999999999999999999999999999999999976554                          


Q ss_pred             CceeccCCCCccccC---CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          226 AIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                       ++|+|||++.....   .....+||..|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+....
T Consensus       135 -~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~  213 (330)
T cd05586         135 -IALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK  213 (330)
T ss_pred             -EEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC
Confidence             56666665543211   12235799999999999765 48899999999999999999999998876554443332110


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC---
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL---  378 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp---  378 (405)
                      .                        .++                         ....++.+.+||.+||+.||++|+   
T Consensus       214 ~------------------------~~~-------------------------~~~~~~~~~~li~~~L~~~P~~R~~~~  244 (330)
T cd05586         214 V------------------------RFP-------------------------KNVLSDEGRQFVKGLLNRNPQHRLGAH  244 (330)
T ss_pred             C------------------------CCC-------------------------CccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence            0                        000                         012466889999999999999998   


Q ss_pred             -CHHHHHcCCCCCCC
Q 015532          379 -KAREALRHPFFTRD  392 (405)
Q Consensus       379 -ta~elL~hp~f~~~  392 (405)
                       +++++++||||...
T Consensus       245 ~~~~~ll~h~~~~~~  259 (330)
T cd05586         245 RDAVELKEHPFFADI  259 (330)
T ss_pred             CCHHHHhcCccccCC
Confidence             79999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.2e-38  Score=300.55  Aligned_cols=258  Identities=29%  Similarity=0.532  Sum_probs=195.5

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|++.+.||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.+.|+++....            
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            467899999999999999999999999999999998642   22335567899999999998762110            


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.||+.||.|||++||+||||||+||+++.++                 
T Consensus        93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~-----------------  155 (343)
T cd07851          93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-----------------  155 (343)
T ss_pred             ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-----------------
Confidence                               12578889999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                                .++|+|||.+...........++..|+|||.+.+. .++.++|||||||++|+|++|+.||.+....+.+
T Consensus       156 ----------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~  225 (343)
T cd07851         156 ----------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQL  225 (343)
T ss_pred             ----------CEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                      35666666665444333445678899999998763 6789999999999999999999999988888888


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccch-hhhhhcccCchHHHHHHHHHccccC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ..+....+.+++.+..+........+...                    ..... ..........+..+.+||.+||..|
T Consensus       226 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~  285 (343)
T cd07851         226 KRIMNLVGTPDEELLQKISSESARNYIQS--------------------LPQMPKKDFKEVFSGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HHHHHhcCCCCHHHHhhccchhHHHHHHh--------------------ccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence            88888777777665443321111000000                    00000 0001111234778999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~  394 (405)
                      |++|||+.++++||||++...
T Consensus       286 P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         286 PDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             hhhCCCHHHHhcCCCccccCC
Confidence            999999999999999987543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2e-38  Score=275.74  Aligned_cols=227  Identities=25%  Similarity=0.366  Sum_probs=175.2

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHh-hcCCCCC----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGT----------------  153 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~-~~~~~~~----------------  153 (405)
                      ..+.+..||+|+-|+||+++.+.+|...|||.+++..  ...++.+..+.++..-. .+.|+..                
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel  172 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL  172 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence            4567889999999999999999999999999997533  33455666666655543 2333221                


Q ss_pred             -----------ccccCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          154 -----------RYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       154 -----------~~~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                 .++.++|..+-++...++.||.||. .+||+|||+||+|||++..|                       
T Consensus       173 Ms~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G-----------------------  229 (391)
T KOG0983|consen  173 MSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-----------------------  229 (391)
T ss_pred             HHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC-----------------------
Confidence                       1466888888899999999999999 57999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHE-NLEHLA  295 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~lltg~~pf~~~~-~~~~~~  295 (405)
                          .+||||||++....+..  +...|.+.|||||.+.-.   .|+.++||||||++++||+||+.||.+.+ +.+.+.
T Consensus       230 ----niKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt  305 (391)
T KOG0983|consen  230 ----NIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT  305 (391)
T ss_pred             ----CEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH
Confidence                56777777776544332  335799999999998643   59999999999999999999999999854 445555


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+..   ..|+.+                                            ......|+++++|+..||++|+.
T Consensus       306 kvln---~ePP~L--------------------------------------------~~~~gFSp~F~~fv~~CL~kd~r  338 (391)
T KOG0983|consen  306 KVLN---EEPPLL--------------------------------------------PGHMGFSPDFQSFVKDCLTKDHR  338 (391)
T ss_pred             HHHh---cCCCCC--------------------------------------------CcccCcCHHHHHHHHHHhhcCcc
Confidence            5443   222110                                            11123688999999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDV  393 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~  393 (405)
                      +||.-.++|+|||+....
T Consensus       339 ~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  339 KRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             cCcchHHHhcCcceeecc
Confidence            999999999999998653

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-39  Score=300.34  Aligned_cols=230  Identities=26%  Similarity=0.395  Sum_probs=184.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCC--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGT--------------  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~--------------  153 (405)
                      +.|...++||+|+||.||-|+.+.||+-||.|.+.+.    .+.....++|-.||++++.+.++..              
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            5688899999999999999999999999999988542    2334557789999999988866211              


Q ss_pred             ---------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          154 ---------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       154 ---------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                     ....|++..+..++.+|+.||++||+.+||.|||||+|||+++.|                    
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--------------------  324 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--------------------  324 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--------------------
Confidence                           124789999999999999999999999999999999999997766                    


Q ss_pred             cCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                             +++|+|+|+|.......  ...+||.+|||||++.+..|+...|+|||||++|||+.|+.||........-..
T Consensus       325 -------hvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE  397 (591)
T KOG0986|consen  325 -------HVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE  397 (591)
T ss_pred             -------CeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH
Confidence                   46677777776554433  335899999999999999999999999999999999999999976544332222


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+..                                              .+...++.+..|+++++|.+.+|+.||++
T Consensus       398 vdrr~----------------------------------------------~~~~~ey~~kFS~eakslc~~LL~Kdp~~  431 (591)
T KOG0986|consen  398 VDRRT----------------------------------------------LEDPEEYSDKFSEEAKSLCEGLLTKDPEK  431 (591)
T ss_pred             HHHHH----------------------------------------------hcchhhcccccCHHHHHHHHHHHccCHHH
Confidence            22211                                              11223344677899999999999999999


Q ss_pred             CC-----CHHHHHcCCCCCCCCC
Q 015532          377 RL-----KAREALRHPFFTRDVR  394 (405)
Q Consensus       377 Rp-----ta~elL~hp~f~~~~~  394 (405)
                      |.     +++++.+||||+.-..
T Consensus       432 RLGcrg~ga~evk~HpfFk~lnw  454 (591)
T KOG0986|consen  432 RLGCRGEGAQEVKEHPFFKDLNW  454 (591)
T ss_pred             hccCCCcCcchhhhCcccccCCH
Confidence            98     6889999999998544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-38  Score=300.76  Aligned_cols=216  Identities=26%  Similarity=0.351  Sum_probs=171.4

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcE-EEEEEecchhh---hhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~-vAiK~~~~~~~---~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..+.+.||+|+||+||+|.++  |+. ||||++.....   ..+.+.+|+.+|.+++|+|++...               
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            455667999999999999987  444 99999975332   256899999999999999984311               


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                     ...++...+..++.||+.||+|||+++ ||||||||+|||++.++                    
T Consensus       121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~--------------------  180 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG--------------------  180 (362)
T ss_pred             eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC--------------------
Confidence                           356888999999999999999999999 99999999999997543                    


Q ss_pred             cCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHh--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL--GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                            .++||+|||+++....   ..+...||..|||||++.  ...|+.|+||||||+++|||+||+.||.+....+.
T Consensus       181 ------~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~  254 (362)
T KOG0192|consen  181 ------KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV  254 (362)
T ss_pred             ------CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                  2577888888765543   233368999999999999  55899999999999999999999999999887444


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+...                      +.+...|                          ..+++.+..||.+||..|
T Consensus       255 ~~~v~~~----------------------~~Rp~~p--------------------------~~~~~~l~~l~~~CW~~d  286 (362)
T KOG0192|consen  255 ASAVVVG----------------------GLRPPIP--------------------------KECPPHLSSLMERCWLVD  286 (362)
T ss_pred             HHHHHhc----------------------CCCCCCC--------------------------ccCCHHHHHHHHHhCCCC
Confidence            4333221                      1111111                          224668899999999999


Q ss_pred             CCCCCCHHHHHc
Q 015532          374 PAERLKAREALR  385 (405)
Q Consensus       374 P~~Rpta~elL~  385 (405)
                      |++||+..+++.
T Consensus       287 p~~RP~f~ei~~  298 (362)
T KOG0192|consen  287 PSRRPSFLEIVS  298 (362)
T ss_pred             CCcCCCHHHHHH
Confidence            999999998874

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.4e-38  Score=296.20  Aligned_cols=235  Identities=22%  Similarity=0.391  Sum_probs=176.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .|++.+.||+|+||.||+|++..+++.||+|++...  ......+.+|+++++++.|+++....                
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            588999999999999999999999999999998643  23345678899999999999874321                


Q ss_pred             -------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCc
Q 015532          155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  227 (405)
Q Consensus       155 -------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  227 (405)
                             +..+++..+..++.|++.||.|||++||+|+||||+|||++.++.                           +
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~---------------------------~  134 (279)
T cd06619          82 DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQ---------------------------V  134 (279)
T ss_pred             CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCC---------------------------E
Confidence                   234678889999999999999999999999999999999976654                           5


Q ss_pred             eeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Q 015532          228 KLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPH  306 (405)
Q Consensus       228 kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~  306 (405)
                      +|+|||++...... .....||..|+|||++.+..++.++|+|||||++|+|++|..||......+...        .+.
T Consensus       135 ~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~--------~~~  206 (279)
T cd06619         135 KLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL--------MPL  206 (279)
T ss_pred             EEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc--------chH
Confidence            66666655433222 233578999999999998889999999999999999999999996532111000        000


Q ss_pred             HHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          307 HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ....        .                      ......+.   ......+.++.+|+.+||+.||++||+++|+++|
T Consensus       207 ~~~~--------~----------------------~~~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         207 QLLQ--------C----------------------IVDEDPPV---LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHH--------H----------------------HhccCCCC---CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            0000        0                      00000000   0012346688999999999999999999999999


Q ss_pred             CCCCCCCCC
Q 015532          387 PFFTRDVRR  395 (405)
Q Consensus       387 p~f~~~~~~  395 (405)
                      |||+.....
T Consensus       254 ~~~~~~~~~  262 (279)
T cd06619         254 PFIVQYNDG  262 (279)
T ss_pred             cccccccCc
Confidence            999876443

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=9.9e-38  Score=291.04  Aligned_cols=252  Identities=33%  Similarity=0.601  Sum_probs=184.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||+|++....   ...+.+..|+.+++.+.|+++....              
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            47999999999999999999999999999999985432   2335577899999999998863211              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+||+++.++.                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~----------------------  138 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQ----------------------  138 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCc----------------------
Confidence                         235788999999999999999999999999999999999977664                      


Q ss_pred             CCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           ++|+|||++.......   ....++..|+|||++.+ ..++.++|||||||++|+|++|..||.+....+.+..+
T Consensus       139 -----~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~  213 (286)
T cd07847         139 -----IKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLI  213 (286)
T ss_pred             -----EEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence                 4555555554332211   12357888999999876 45789999999999999999999999988887777777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+..+............  ..++.   ....+....              ...........+..+.+||.+||+.||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  274 (286)
T cd07847         214 RKTLGDLIPRHQQIFST--NQFFK---GLSIPEPET--------------REPLESKFPNISSPALSFLKGCLQMDPTER  274 (286)
T ss_pred             HHHhCCCChHHhhhccc--ccccc---cccCCCccc--------------ccCHHHHhccCCHHHHHHHHHHhcCCcccc
Confidence            76666544321111000  00000   000000000              000011123456789999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||+.|++.||||
T Consensus       275 p~~~eil~~~~f  286 (286)
T cd07847         275 LSCEELLEHPYF  286 (286)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=9.6e-39  Score=303.40  Aligned_cols=218  Identities=28%  Similarity=0.387  Sum_probs=167.5

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHH-HHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~-il~~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|++..+++.||+|++.+..    .....+..|+. +++.+.|+++....                  
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            47999999999999999999999999996532    12233445554 67888998885422                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||||+|||++.+|.                          
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~--------------------------  134 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGH--------------------------  134 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--------------------------
Confidence                     134678889999999999999999999999999999999976664                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+....-
T Consensus       135 -~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  213 (321)
T cd05603         135 -VVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL  213 (321)
T ss_pred             -EEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCC
Confidence             5556666554321   112235789999999999988899999999999999999999999988765544433321100


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH--
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA--  380 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta--  380 (405)
                                                                        ......+..+.++|.+||+.||++|+++  
T Consensus       214 --------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (321)
T cd05603         214 --------------------------------------------------QLPGGKTVAACDLLVGLLHKDQRRRLGAKA  243 (321)
T ss_pred             --------------------------------------------------CCCCCCCHHHHHHHHHHccCCHhhcCCCCC
Confidence                                                              1112345688999999999999999975  


Q ss_pred             --HHHHcCCCCCCC
Q 015532          381 --REALRHPFFTRD  392 (405)
Q Consensus       381 --~elL~hp~f~~~  392 (405)
                        .++++|+||...
T Consensus       244 ~~~~~~~~~~~~~~  257 (321)
T cd05603         244 DFLEIKNHVFFSPI  257 (321)
T ss_pred             CHHHHhCCCCcCCC
Confidence              599999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-39  Score=311.64  Aligned_cols=225  Identities=25%  Similarity=0.454  Sum_probs=178.2

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc----------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR----------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~----------------------  154 (405)
                      -+||+|.||+||-|+|..+....|||-+... ....+-...||.+.++|.|.||+..+                      
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            3699999999999999999999999998543 33445577899999999999984322                      


Q ss_pred             ------cccC--CHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 ------YRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 ------~~~l--~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                            .+.+  +|..+-.+.+||++||.|||++.|||||||-+||||+..                          .+.
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy--------------------------SGv  714 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY--------------------------SGV  714 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec--------------------------cce
Confidence                  2344  678889999999999999999999999999999999752                          345


Q ss_pred             ceeccCCCCcccc---CCccceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH-H--HH
Q 015532          227 IKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M--ME  298 (405)
Q Consensus       227 ~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~-~--i~  298 (405)
                      +||+|||.++...   .-..++.||..|||||++..+  +|+.++|||||||++.||.||++||......+... +  |.
T Consensus       715 lKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmy  794 (1226)
T KOG4279|consen  715 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMY  794 (1226)
T ss_pred             EEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcce
Confidence            7778888775433   233457899999999999765  59999999999999999999999997654433211 0  11


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +.-.++|                                                  +..+.++++||.+|+..||.+||
T Consensus       795 KvHP~iP--------------------------------------------------eelsaeak~FilrcFepd~~~R~  824 (1226)
T KOG4279|consen  795 KVHPPIP--------------------------------------------------EELSAEAKNFILRCFEPDPCDRP  824 (1226)
T ss_pred             ecCCCCc--------------------------------------------------HHHHHHHHHHHHHHcCCCcccCc
Confidence            1112222                                                  34477899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCCCCcc
Q 015532          379 KAREALRHPFFTRDVRRPTL  398 (405)
Q Consensus       379 ta~elL~hp~f~~~~~~~~~  398 (405)
                      +|.++|..||++.+.+.+..
T Consensus       825 sA~~LL~DpFlq~~~kk~r~  844 (1226)
T KOG4279|consen  825 SAKDLLQDPFLQHNNKKPRP  844 (1226)
T ss_pred             cHHHhccCcccccCCCCCCC
Confidence            99999999999988655443

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=9.4e-38  Score=291.11  Aligned_cols=249  Identities=33%  Similarity=0.521  Sum_probs=184.0

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||.|+||.||+|++..+++.||||+++...   .....+..|++++++++|+++....               
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4899999999999999999999999999999986432   2235677899999999999873321               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||+|||++|++|+||+|+||+++.++.+                     
T Consensus        81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~---------------------  139 (284)
T cd07860          81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI---------------------  139 (284)
T ss_pred             cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE---------------------
Confidence                         1346788999999999999999999999999999999999876654                     


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            +|+|||++......   .....++..|+|||++.+.. ++.++|||||||++|+|+||..||.+.+..+.+..+
T Consensus       140 ------~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~  213 (284)
T cd07860         140 ------KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI  213 (284)
T ss_pred             ------EEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence                  55555544332211   11235678899999887654 688999999999999999999999988888777777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+..+..+..+....... ..+..     .++..               ............+..+.++|.+||+.||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  272 (284)
T cd07860         214 FRTLGTPDEVVWPGVTSL-PDYKP-----SFPKW---------------ARQDFSKVVPPLDEDGRDLLSQMLHYDPNKR  272 (284)
T ss_pred             HHHhCCCChhhhhhhhHH-HHHHh-----hcccc---------------cccCHHHHcccCCHHHHHHHHHhcCCCcccC
Confidence            777776654432211110 00000     00000               0000011122356788999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||++++++||||
T Consensus       273 pt~~~~l~~~~f  284 (284)
T cd07860         273 ISAKAALAHPFF  284 (284)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=2.5e-38  Score=301.24  Aligned_cols=219  Identities=24%  Similarity=0.376  Sum_probs=166.4

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHh-hcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA-RHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~-~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|++..+++.||||++++..    ...+.+..|+.++.++. |+++....                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            47999999999999999999999999997532    23345678999998885 55542110                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                          
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~--------------------------  134 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGH--------------------------  134 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCC--------------------------
Confidence                     245789999999999999999999999999999999999987664                          


Q ss_pred             CceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHH
Q 015532          226 AIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN------LEHLAM  296 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~------~~~~~~  296 (405)
                       ++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.....      .+.+..
T Consensus       135 -~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~  213 (327)
T cd05617         135 -IKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQ  213 (327)
T ss_pred             -EEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHH
Confidence             5556666554311   112335799999999999998999999999999999999999999964321      111111


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      ...  .                                               .....+...+..+.++|.+||+.||++
T Consensus       214 ~~~--~-----------------------------------------------~~~~~p~~~~~~~~~li~~~L~~dP~~  244 (327)
T cd05617         214 VIL--E-----------------------------------------------KPIRIPRFLSVKASHVLKGFLNKDPKE  244 (327)
T ss_pred             HHH--h-----------------------------------------------CCCCCCCCCCHHHHHHHHHHhccCHHH
Confidence            000  0                                               000112234678899999999999999


Q ss_pred             CCC------HHHHHcCCCCCCC
Q 015532          377 RLK------AREALRHPFFTRD  392 (405)
Q Consensus       377 Rpt------a~elL~hp~f~~~  392 (405)
                      |++      .+++++||||+.-
T Consensus       245 R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         245 RLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             cCCCCCCCCHHHHHcCCCCCCC
Confidence            998      5799999999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.8e-38  Score=292.65  Aligned_cols=225  Identities=22%  Similarity=0.411  Sum_probs=173.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~--------------  154 (405)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+.++.++ .|+++....              
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ   83 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence            45679999999999999999999999999999999976555556778899999998 576652110              


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..+..++.|++.||.|||++||+||||||+||+++.++.              
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~--------------  149 (272)
T cd06637          84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE--------------  149 (272)
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCC--------------
Confidence                                 124678889999999999999999999999999999999976554              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                                   ++|+|||++.....   ......|+..|+|||++.+     ..++.++|||||||++|+|++|..||
T Consensus       150 -------------~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~  216 (272)
T cd06637         150 -------------VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL  216 (272)
T ss_pred             -------------EEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence                         56666666543321   1223578999999999863     35888999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       286 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      ...........+....                       .                         ........+.++.+|
T Consensus       217 ~~~~~~~~~~~~~~~~-----------------------~-------------------------~~~~~~~~~~~~~~l  248 (272)
T cd06637         217 CDMHPMRALFLIPRNP-----------------------A-------------------------PRLKSKKWSKKFQSF  248 (272)
T ss_pred             cccCHHHHHHHHhcCC-----------------------C-------------------------CCCCCCCcCHHHHHH
Confidence            7654332222111000                       0                         000012345688999


Q ss_pred             HHHccccCCCCCCCHHHHHcCCCC
Q 015532          366 LQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      |.+||..||.+|||+.++++||||
T Consensus       249 i~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         249 IESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHcCCChhhCCCHHHHhhCCCC
Confidence            999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2.6e-38  Score=301.81  Aligned_cols=229  Identities=27%  Similarity=0.411  Sum_probs=173.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.++||+|+||.||+++++.+++.||+|++.+..    .....+..|+.++..+.|+++....             
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            36999999999999999999999999999999996422    2233466788999999888762210             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                    
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~--------------------  140 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH--------------------  140 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC--------------------
Confidence                           135788899999999999999999999999999999999976654                    


Q ss_pred             CCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                             ++|+|||++......    ....+||+.|+|||++.+     ..++.++|||||||++|+|++|..||...+.
T Consensus       141 -------~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~  213 (332)
T cd05623         141 -------IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL  213 (332)
T ss_pred             -------EEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence                   555666655432111    122479999999999873     3588999999999999999999999988766


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+....+.....                      +..++.                       ....+++++.+||.+||
T Consensus       214 ~~~~~~i~~~~~----------------------~~~~p~-----------------------~~~~~s~~~~~li~~ll  248 (332)
T cd05623         214 VETYGKIMNHKE----------------------RFQFPA-----------------------QVTDVSEDAKDLIRRLI  248 (332)
T ss_pred             HHHHHHHhCCCc----------------------cccCCC-----------------------ccccCCHHHHHHHHHHc
Confidence            555544322100                      001110                       11235778999999999


Q ss_pred             ccCCCC--CCCHHHHHcCCCCCCC
Q 015532          371 RYDPAE--RLKAREALRHPFFTRD  392 (405)
Q Consensus       371 ~~dP~~--Rpta~elL~hp~f~~~  392 (405)
                      ..++++  |++++|+++||||++-
T Consensus       249 ~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         249 CSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             cChhhhcCCCCHHHHhCCCCcCCC
Confidence            765555  6899999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.2e-37  Score=293.83  Aligned_cols=260  Identities=27%  Similarity=0.514  Sum_probs=185.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.++||+|+||.||+|.+..+++.||||++....   .......+|+++++++.|+++....              
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            56999999999999999999999999999999885422   2234456799999999999873221              


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++.+++.++.||+.||.|||++||+|+||||+||+++.++.++++|||++.....
T Consensus        92 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  171 (310)
T cd07865          92 GSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSL  171 (310)
T ss_pred             ceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccC
Confidence                                 01468889999999999999999999999999999999998776655555554322211


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                      ...                   . .........++..|+|||.+.+. .++.++||||||+++|+|++|.+||.+.+...
T Consensus       172 ~~~-------------------~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~  231 (310)
T cd07865         172 SKN-------------------S-KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH  231 (310)
T ss_pred             Ccc-------------------c-CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            000                   0 00011123578889999998765 47889999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+.+..|.+|..+.........  +.   ....+.....     ..      ...  ......+..+.+||.+||..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~-----~~------~~~--l~~~~~~~~~~dli~~~l~~  293 (310)
T cd07865         232 QLTLISQLCGSITPEVWPGVDKLEL--FK---KMELPQGQKR-----KV------KER--LKPYVKDPHALDLIDKLLVL  293 (310)
T ss_pred             HHHHHHHHhCCCChhhcccccchhh--hh---hccCCCccch-----hh------HHh--cccccCCHHHHHHHHHHhcC
Confidence            8888888888877654322210000  00   0000100000     00      000  00011245788999999999


Q ss_pred             CCCCCCCHHHHHcCCCC
Q 015532          373 DPAERLKAREALRHPFF  389 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f  389 (405)
                      ||++|||++|+|+||||
T Consensus       294 ~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         294 DPAKRIDADTALNHDFF  310 (310)
T ss_pred             ChhhccCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=6.5e-38  Score=293.34  Aligned_cols=225  Identities=26%  Similarity=0.407  Sum_probs=181.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+.+|+++++++.|+++....             
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            36999999999999999999999999999999986432    2345678899999999999873321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++                      
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~----------------------  138 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG----------------------  138 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC----------------------
Confidence                          24578889999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .++|+|||++...........|++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+...
T Consensus       139 -----~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  213 (290)
T cd05580         139 -----YIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG  213 (290)
T ss_pred             -----CEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Confidence                 456666666655444444457899999999998888899999999999999999999999876644433333211


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC--
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL--  378 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp--  378 (405)
                      ...                                                  .....+..+.++|.+||+.||++|+  
T Consensus       214 ~~~--------------------------------------------------~~~~~~~~l~~li~~~l~~~p~~R~~~  243 (290)
T cd05580         214 KVR--------------------------------------------------FPSFFSPDAKDLIRNLLQVDLTKRLGN  243 (290)
T ss_pred             Ccc--------------------------------------------------CCccCCHHHHHHHHHHccCCHHHccCc
Confidence            000                                                  1122356889999999999999999  


Q ss_pred             ---CHHHHHcCCCCCCCC
Q 015532          379 ---KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ---ta~elL~hp~f~~~~  393 (405)
                         +++|+++||||+...
T Consensus       244 ~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         244 LKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             ccCCHHHHHcCcccccCC
Confidence               999999999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.8e-37  Score=297.28  Aligned_cols=256  Identities=25%  Similarity=0.439  Sum_probs=182.8

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +.++|++.+.||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++.+.|+++....              
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence            3578999999999999999999999999999999985433 3345677899999999999874211              


Q ss_pred             -------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          155 -------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 -------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                               ...+++..++.++.||+.||.|||++||+||||||+||+++..+           
T Consensus        83 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~-----------  151 (342)
T cd07854          83 GSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED-----------  151 (342)
T ss_pred             ccccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC-----------
Confidence                                     12468889999999999999999999999999999999996432           


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~  282 (405)
                                     ..++|+|||.+......      .....++..|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus       152 ---------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~  216 (342)
T cd07854         152 ---------------LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK  216 (342)
T ss_pred             ---------------ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCC
Confidence                           23566666665433211      112357889999998765 45889999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||.+....+....+..........................   .                 ..............+.++
T Consensus       217 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~  276 (342)
T cd07854         217 PLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRND---G-----------------GEPRRPLRDLLPGVNPEA  276 (342)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc---c-----------------cccCCCHHHHccCCCHHH
Confidence            99988777665554443332222111110000000000000   0                 000001111223456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      .+||.+||+.||++|||+.|+|+||||+.
T Consensus       277 ~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         277 LDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             HHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            99999999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=6.3e-38  Score=292.38  Aligned_cols=251  Identities=37%  Similarity=0.613  Sum_probs=185.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||+|+||.||+|.+..+++.||||++....   ...+.+.+|+.+++.+.|+++....               
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            5899999999999999999999899999999986432   3346688899999999998873221               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+                      
T Consensus        81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~----------------------  138 (286)
T cd07832          81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVL----------------------  138 (286)
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcE----------------------
Confidence                        1347888999999999999999999999999999999999876655                      


Q ss_pred             CCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           +|+|||.+......    .....|+..|+|||++.+. .++.++|||||||++|+|++|.++|.+..+...+..+
T Consensus       139 -----~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~  213 (286)
T cd07832         139 -----KIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIV  213 (286)
T ss_pred             -----EEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHH
Confidence                 45555544332221    1224688999999998764 4689999999999999999999999888887777777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ....+.+....+...... ..+    ....++...               ...........+..+.+||.+||+.||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  273 (286)
T cd07832         214 FRTLGTPNEETWPGLTSL-PDY----NKITFPESK---------------PIPLEEIFPDASPEALDLLKGLLVYDPSKR  273 (286)
T ss_pred             HHHcCCCChHHHhhccCc-chh----hcccCCCCC---------------cchHHHhCCCccHHHHHHHHHHhccChhhC
Confidence            766665543222111000 000    000111000               000112223456789999999999999999


Q ss_pred             CCHHHHHcCCCCC
Q 015532          378 LKAREALRHPFFT  390 (405)
Q Consensus       378 pta~elL~hp~f~  390 (405)
                      ||++++|+||||.
T Consensus       274 ~~~~~~l~h~~~~  286 (286)
T cd07832         274 LSAAEALRHPYFT  286 (286)
T ss_pred             CCHHHHhhCcCcC
Confidence            9999999999994

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2.3e-38  Score=301.62  Aligned_cols=275  Identities=20%  Similarity=0.254  Sum_probs=180.9

Q ss_pred             EEeeeecc--cceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           96 ILSKMGEG--TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        96 ~~~~LG~G--~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ++++||+|  +|++||++.++.+++.||||+++..   ....+.+.+|+.+++.++|+++....                
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            56789999  7899999999999999999999653   23345567799999999999984321                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++++||+...            
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~------------  149 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL------------  149 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhh------------
Confidence                         1247888999999999999999999999999999999999998888888876431            


Q ss_pred             CCCCCceeccCCCCccc-cCCccceecCCCcchhHHHhC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                            .+.++|..... ........++..|+|||++.+  ..++.++|||||||++|+|++|..||...........  
T Consensus       150 ------~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~--  221 (327)
T cd08227         150 ------SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--  221 (327)
T ss_pred             ------ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHH--
Confidence                  22233222111 111122356778999999976  3589999999999999999999999987554433222  


Q ss_pred             HHhCCCChHHHHHhhHhhHHhh----hcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ...+..|........ ......    ..+....+........     .................++.+.+||.+||++||
T Consensus       222 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  295 (327)
T cd08227         222 KLNGTVPCLLDTTTI-PAEELTMKPSRSGANSGLGESTTVST-----PRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNP  295 (327)
T ss_pred             HhcCCccccccccch-hhhhcccCCcccCCcCCCCcccccCC-----cCccccCCcccccccccCHHHHHHHHHHHhhCc
Confidence            222322211100000 000000    0000000000000000     000000000011223456789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ++|||++|+++||||++-...+
T Consensus       296 ~~Rpt~~ell~~p~f~~~~~~~  317 (327)
T cd08227         296 DARPSASTLLNHSFFKQIKRRA  317 (327)
T ss_pred             hhcCCHHHHhcChhhhhcchhh
Confidence            9999999999999998755444

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=2.6e-37  Score=294.93  Aligned_cols=260  Identities=27%  Similarity=0.475  Sum_probs=190.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCC--CcEEEEEEecch---hhhhHHHHHHHHHHHHHh-hcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEK--KELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~--~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~-~~~~~~~~------------  154 (405)
                      +|++.+.||+|+||.||+|++..+  +..||||++...   ......+.+|+.+++++. |+++....            
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            589999999999999999999888  889999998642   123456778999999995 77653211            


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++........
T Consensus        81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~  160 (332)
T cd07857          81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG  160 (332)
T ss_pred             EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc
Confidence                              13467889999999999999999999999999999999998776655555554332211000


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                                          ..........||..|+|||++.+ ..++.++||||+||++|+|++|.+||...+....+.
T Consensus       161 --------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~  220 (332)
T cd07857         161 --------------------ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLN  220 (332)
T ss_pred             --------------------cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHH
Confidence                                00001122468999999998876 468999999999999999999999999988888899


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHH-hhhcCCcccCCCCCCchhhHHHHHHhccchh-hhhhcccCchHHHHHHHHHccccC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEK-YFRRGARLDWPDGATSRDSMRAVWKLLRLPN-LIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      .+...+|.++............. +.....                     ..+. .........+..+.+|+.+||+.|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~  279 (332)
T cd07857         221 QILQVLGTPDEETLSRIGSPKAQNYIRSLP---------------------NIPKKPFESIFPNANPLALDLLEKLLAFD  279 (332)
T ss_pred             HHHHHhCCCCHHHHHhhhhhhHHHHHHhcc---------------------ccCCcchHhhCCCCCHHHHHHHHHHccCC
Confidence            99999988777654433221111 100000                     0000 000111234678999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~  393 (405)
                      |++|||+.|+++||||+...
T Consensus       280 P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         280 PTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             cccCCCHHHHhcChhhhhhc
Confidence            99999999999999998653

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.2e-37  Score=294.08  Aligned_cols=266  Identities=26%  Similarity=0.436  Sum_probs=191.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.++||+|+||.||+|++..+++.||||++....   .......+|+++++.++|+++....             
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            578999999999999999999999999999999985422   2234567899999999999874321             


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++++|||++....
T Consensus        87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866          87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD  166 (311)
T ss_pred             CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence                                  1257889999999999999999999999999999999999988888888887654332


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                      ......            ..+.. ..........+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..
T Consensus       167 ~~~~~~------------~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~  233 (311)
T cd07866         167 GPPPNP------------KGGGG-GGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI  233 (311)
T ss_pred             CCCccc------------ccCCc-ccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence            211000            00000 000111234678999999998764 5889999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+....+.+++.....+.....       ...+..             ....+..........+..+.+||.+||+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~  293 (311)
T cd07866         234 DQLHLIFKLCGTPTEETWPGWRSLPG-------CEGVHS-------------FTNYPRTLEERFGKLGPEGLDLLSKLLS  293 (311)
T ss_pred             HHHHHHHHHhCCCChhhchhhhhccc-------cccccc-------------CCCCCccHHHHcccCChhHHHHHHHHcc
Confidence            88887777766655432211100000       000000             0000111111223345688999999999


Q ss_pred             cCCCCCCCHHHHHcCCCC
Q 015532          372 YDPAERLKAREALRHPFF  389 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f  389 (405)
                      .||++|||+.|+++||||
T Consensus       294 ~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         294 LDPYKRLTASDALEHPYF  311 (311)
T ss_pred             cCcccCcCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=2.3e-37  Score=294.75  Aligned_cols=259  Identities=28%  Similarity=0.498  Sum_probs=197.7

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|++.+.||.|+||.||+|.+..+++.||||++...   ....+.+..|+.+++.+.|+++....            
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            568899999999999999999999999999999987532   22345677899999999999873311            


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+||+++.++                      
T Consensus        88 v~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~----------------------  145 (328)
T cd07856          88 VTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC----------------------  145 (328)
T ss_pred             EeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC----------------------
Confidence                          13457778888999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                           .++|+|||.+...........++..|+|||.+.+ ..++.++|||||||++|+|++|..||...........+.+
T Consensus       146 -----~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~  220 (328)
T cd07856         146 -----DLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD  220 (328)
T ss_pred             -----CEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence                 4566666666544433334567889999998766 5689999999999999999999999999888888888888


Q ss_pred             HhCCCChHHHHHhhHhh-HHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .+|.+|..+........ ..++....                    ...+..........+..+.++|.+||+.||++||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  280 (328)
T cd07856         221 LLGTPPDDVINTICSENTLRFVQSLP--------------------KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRI  280 (328)
T ss_pred             HhCCCCHHHHHhccchhhHHHHhhcc--------------------ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCC
Confidence            88988877654321111 11110000                    0000011112234567899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVRR  395 (405)
Q Consensus       379 ta~elL~hp~f~~~~~~  395 (405)
                      |+++++.||||......
T Consensus       281 t~~ell~~~~~~~~~~~  297 (328)
T cd07856         281 SAAEALAHPYLAPYHDP  297 (328)
T ss_pred             CHHHHhcCCccccccCC
Confidence            99999999999876443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-37  Score=292.06  Aligned_cols=259  Identities=31%  Similarity=0.513  Sum_probs=181.3

Q ss_pred             CeEEEeeeecccceeEEEEEecC--CCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNE--KKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~--~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +|++.++||+|+||.||+|.+..  +++.||||++...    ....+...+|+.+++.+.|+++....            
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            58999999999999999999988  8899999998752    23345677899999999999873211            


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+||+++.++               
T Consensus        81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~---------------  145 (316)
T cd07842          81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG---------------  145 (316)
T ss_pred             EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC---------------
Confidence                                 02567888999999999999999999999999999999998722               


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                              +.+..+||+|||++......      .....++..|+|||++.+. .++.++|||||||++|+|++|.+||.
T Consensus       146 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  217 (316)
T cd07842         146 --------PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK  217 (316)
T ss_pred             --------CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence                    12345666666665543221      1224678899999998774 57899999999999999999999997


Q ss_pred             CCChH---------HHHHHHHHHhCCCChHHHHHhhHhhHH--hhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcc
Q 015532          287 THENL---------EHLAMMERVLGPLPHHMVIRADRRAEK--YFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  355 (405)
Q Consensus       287 ~~~~~---------~~~~~i~~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
                      +....         ..+..+...++..+.............  .........++.     .....          ..+..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----------~~~~~  282 (316)
T cd07842         218 GREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS-----NSLAK----------WMEKH  282 (316)
T ss_pred             CCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC-----ccHHH----------HHHhc
Confidence            65432         234444555554443322211110000  000000000000     00000          00111


Q ss_pred             cCchHHHHHHHHHccccCCCCCCCHHHHHcCCCC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      ...+..+.++|.+||+.||++|||+.|+++||||
T Consensus       283 ~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         283 KKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             cCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            2456789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-38  Score=300.51  Aligned_cols=225  Identities=31%  Similarity=0.504  Sum_probs=169.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc---hhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ..|+++++||+||.+.||++... +.+.||+|.+..   .......+..||..|.+|..+..+-.+              
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            45999999999999999999874 445677776532   344567789999999999876431110              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ....+.-.++.+..||+.|+.++|++||||.||||.|+|+..                        
T Consensus       440 E~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk------------------------  495 (677)
T KOG0596|consen  440 ECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK------------------------  495 (677)
T ss_pred             ecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe------------------------
Confidence                          122333488999999999999999999999999999999853                        


Q ss_pred             CCCCCCceeccCCCCccccCCccc-----eecCCCcchhHHHhCCC-----------CCCchhHHHHHHHHHHHHhCCCC
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLG-----------WNYPCDLWSVGCILVELCSGEAL  284 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~-----------~~~~~DiwSlG~il~~lltg~~p  284 (405)
                          +.+||+|||+|.....+.+.     -+||+.||+||.+....           .+.++||||||||||+|+.|++|
T Consensus       496 ----G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktP  571 (677)
T KOG0596|consen  496 ----GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTP  571 (677)
T ss_pred             ----eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCc
Confidence                46899999999877665543     48999999999996432           56889999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       285 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      |....+  .++++..+..+                   +....+|+                       ...  ..++++
T Consensus       572 f~~~~n--~~aKl~aI~~P-------------------~~~Iefp~-----------------------~~~--~~~li~  605 (677)
T KOG0596|consen  572 FGQIIN--QIAKLHAITDP-------------------NHEIEFPD-----------------------IPE--NDELID  605 (677)
T ss_pred             hHHHHH--HHHHHHhhcCC-------------------CccccccC-----------------------CCC--chHHHH
Confidence            964322  22333222211                   11222221                       001  124899


Q ss_pred             HHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          365 LLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      +++.||.+||.+|||+.++|+|||++-
T Consensus       606 ~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  606 VMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHHHhcCcccCCCcHHHhcCccccc
Confidence            999999999999999999999999987

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-37  Score=290.61  Aligned_cols=251  Identities=30%  Similarity=0.485  Sum_probs=180.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.+.||+|+||.||+|.++.+++.||||.+....  .....+.+|+++++.+.|+++....               
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            67999999999999999999999899999999986432  2234567899999999999873211               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+                      
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~----------------------  142 (291)
T cd07844          85 LDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGEL----------------------  142 (291)
T ss_pred             CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCE----------------------
Confidence                        1246788999999999999999999999999999999999876655                      


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE-NLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~-~~~~~~~i  297 (405)
                           +|+|||++......   .....++..|+|||++.+ ..++.++||||+||++|+|++|..||.+.. ..+.+..+
T Consensus       143 -----kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~  217 (291)
T cd07844         143 -----KLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKI  217 (291)
T ss_pred             -----EECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence                 55555544322111   112246788999999876 458899999999999999999999997765 45556666


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch--HHHHHHHHHccccCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA--GDLIDLLQGLLRYDPA  375 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ll~~~L~~dP~  375 (405)
                      .+.++.+...............     ...+..  ..             ...........+  ..+.++|.+||+.||+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~li~~~L~~~p~  277 (291)
T cd07844         218 FRVLGTPTEETWPGVSSNPEFK-----PYSFPF--YP-------------PRPLINHAPRLDRIPHGEELALKFLQYEPK  277 (291)
T ss_pred             HHhcCCCChhhhhhhhhccccc-----cccccc--cC-------------ChhHHHhCcCCCCchhHHHHHHHHhccCcc
Confidence            6666655443322221100000     000000  00             000011111222  6788999999999999


Q ss_pred             CCCCHHHHHcCCCC
Q 015532          376 ERLKAREALRHPFF  389 (405)
Q Consensus       376 ~Rpta~elL~hp~f  389 (405)
                      +|||+.++++||||
T Consensus       278 ~Rps~~e~l~~~~f  291 (291)
T cd07844         278 KRISAAEAMKHPYF  291 (291)
T ss_pred             cccCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=3.9e-38  Score=300.45  Aligned_cols=229  Identities=26%  Similarity=0.401  Sum_probs=173.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||++++..+++.||||++.+..    .....+..|+.++..+.|+++....             
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46999999999999999999999999999999986532    2234466788999999888763210             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||+|||++||+||||||+|||++.++.                    
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~--------------------  140 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGH--------------------  140 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCC--------------------
Confidence                           235788899999999999999999999999999999999976654                    


Q ss_pred             CCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                             +||+|||++.......    ....||+.|+|||++.+     ..++.++|||||||++|+|++|..||...+.
T Consensus       141 -------~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~  213 (331)
T cd05624         141 -------IRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL  213 (331)
T ss_pred             -------EEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence                   5556666554332211    22469999999999976     4578899999999999999999999987766


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+....+.....                      +..++                       .....++..+.+||.+||
T Consensus       214 ~~~~~~i~~~~~----------------------~~~~p-----------------------~~~~~~~~~~~~li~~ll  248 (331)
T cd05624         214 VETYGKIMNHEE----------------------RFQFP-----------------------SHITDVSEEAKDLIQRLI  248 (331)
T ss_pred             HHHHHHHHcCCC----------------------cccCC-----------------------CccccCCHHHHHHHHHHc
Confidence            554443322100                      00111                       011234678999999999


Q ss_pred             ccCCCC--CCCHHHHHcCCCCCCC
Q 015532          371 RYDPAE--RLKAREALRHPFFTRD  392 (405)
Q Consensus       371 ~~dP~~--Rpta~elL~hp~f~~~  392 (405)
                      ..++++  |++++++++||||+..
T Consensus       249 ~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         249 CSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             cCchhhcCCCCHHHHhcCCCcCCC
Confidence            976655  5699999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=2.1e-37  Score=284.26  Aligned_cols=221  Identities=25%  Similarity=0.430  Sum_probs=173.1

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||+|+||.||++.+..+++.||+|.+....   ...+.+..|+++++++.|+++....               
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4899999999999999999999999999999986432   2345677899999999998763211               


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++.+++.++.|++.||.|||++||+||||||+||+++.++.+                   
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~-------------------  141 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNII-------------------  141 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcE-------------------
Confidence                           1236788899999999999999999999999999999999876654                   


Q ss_pred             CCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                              +|+|||++.....   ......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......
T Consensus       142 --------~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~  213 (257)
T cd08223         142 --------KVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR  213 (257)
T ss_pred             --------EEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence                    5555554433221   11234688899999999998899999999999999999999999987665443332


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +..  +.+|                                               ......++.+.+|+.+||+.||++
T Consensus       214 ~~~--~~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  244 (257)
T cd08223         214 IIE--GKLP-----------------------------------------------PMPKDYSPELGELIATMLSKRPEK  244 (257)
T ss_pred             HHh--cCCC-----------------------------------------------CCccccCHHHHHHHHHHhccCccc
Confidence            211  1110                                               011234668999999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 015532          377 RLKAREALRHPFF  389 (405)
Q Consensus       377 Rpta~elL~hp~f  389 (405)
                      |||+.++++||||
T Consensus       245 Rp~~~~~l~~~~~  257 (257)
T cd08223         245 RPSVKSILRQPYI  257 (257)
T ss_pred             CCCHHHHhcCCCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-37  Score=290.74  Aligned_cols=253  Identities=34%  Similarity=0.643  Sum_probs=190.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++..   ....+.+.+|+++++.+.|+++....              
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            4699999999999999999999999999999998643   23346788999999999998873321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~----------------------  138 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGV----------------------  138 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC----------------------
Confidence                         134778899999999999999999999999999999999976654                      


Q ss_pred             CCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                           ++|+|||.+.......    ....++..|+|||++.+. .++.++||||||+++|+|++|.+||.+....+.+..
T Consensus       139 -----~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~  213 (288)
T cd07833         139 -----LKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL  213 (288)
T ss_pred             -----EEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                 5555555554332221    234678899999999888 789999999999999999999999998888888888


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....+.++............  +   ....++... ..            ..........++.++.+||.+||..||++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~  275 (288)
T cd07833         214 IQKCLGPLPPSHQELFSSNPR--F---AGVAFPEPS-QP------------ESLERRYPGKVSSPALDFLKACLRMDPKE  275 (288)
T ss_pred             HHHHhCCCCHHHhhhcccCcc--c---cccccCCCC-Cc------------HHHHHhcCCccchHHHHHHHHHhccCchh
Confidence            888887777644322110000  0   000000000 00            00011112234778999999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 015532          377 RLKAREALRHPFF  389 (405)
Q Consensus       377 Rpta~elL~hp~f  389 (405)
                      |||++++++||||
T Consensus       276 Rps~~~il~~~~f  288 (288)
T cd07833         276 RLTCDELLQHPYF  288 (288)
T ss_pred             cccHHHHhcCCCC
Confidence            9999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=3.3e-37  Score=288.98  Aligned_cols=250  Identities=34%  Similarity=0.548  Sum_probs=181.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhh-cCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLAR-HDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~-~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++...   .....+.+|+.+++.+.| +++....             
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46999999999999999999999999999999886432   123567789999999976 4542100             


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEec-ccccccCCcccccc
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSR  210 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~-~~~~k~~df~~~~~  210 (405)
                                             ...+++..++.++.||+.||.|||++||+||||||+||+++. ++            
T Consensus        81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~------------  148 (295)
T cd07837          81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG------------  148 (295)
T ss_pred             EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCC------------
Confidence                                   123688899999999999999999999999999999999976 44            


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                     .++|+|||.+......   .....+++.|+|||++.+. .++.++|||||||++|+|++|..||.
T Consensus       149 ---------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~  213 (295)
T cd07837         149 ---------------LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFP  213 (295)
T ss_pred             ---------------eEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCC
Confidence                           4566666655432211   1123567889999998764 57899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +.+..+.+..+.+.++..+........... .+.      ..+.               ..+..........+..+.+||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~---------------~~~~~~~~~~~~~~~~~~~~i  271 (295)
T cd07837         214 GDSELQQLLHIFKLLGTPTEQVWPGVSKLR-DWH------EFPQ---------------WKPQDLSRAVPDLSPEGLDLL  271 (295)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhCcchhhcc-chh------hcCc---------------ccchhHHHhccccCHHHHHHH
Confidence            888877776666655544332211000000 000      0000               000011112234677899999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                      .+||..||++|||+.|+|+||||+
T Consensus       272 ~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         272 QKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHccCChhhcCCHHHHhcCCCcC
Confidence            999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=8e-38  Score=312.16  Aligned_cols=224  Identities=24%  Similarity=0.252  Sum_probs=176.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC-CcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~-~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..|.+.+.||+|+||.||+|.+..+ ++.||+|.+.... .....+..|+.+|+.+.|++++...               
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            4599999999999999999998877 7889999775433 3334567799999999999883211               


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++.++..++.||+.||.|||++||+||||||+|||++.++.                   
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~-------------------  207 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGI-------------------  207 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCc-------------------
Confidence                            124678889999999999999999999999999999999976654                   


Q ss_pred             cCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                              +||+|||++......     ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       208 --------~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~  279 (478)
T PTZ00267        208 --------IKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREI  279 (478)
T ss_pred             --------EEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                    555566655433221     2235799999999999998999999999999999999999999987766554


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+...  ..+                                               .....++..+.+||.+||..|
T Consensus       280 ~~~~~~~--~~~-----------------------------------------------~~~~~~s~~~~~li~~~L~~d  310 (478)
T PTZ00267        280 MQQVLYG--KYD-----------------------------------------------PFPCPVSSGMKALLDPLLSKN  310 (478)
T ss_pred             HHHHHhC--CCC-----------------------------------------------CCCccCCHHHHHHHHHHhccC
Confidence            4433211  000                                               011234668999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCC
Q 015532          374 PAERLKAREALRHPFFTR  391 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~  391 (405)
                      |++|||+++++.|+|++.
T Consensus       311 P~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        311 PALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             hhhCcCHHHHHhCHHHHH
Confidence            999999999999999863

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.9e-37  Score=289.93  Aligned_cols=254  Identities=31%  Similarity=0.475  Sum_probs=185.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh------hhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +|++.+.||+|+||.||+|.+..+++.||||.++....      ....+..|+++++.+.|+++....            
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            58899999999999999999998999999999965322      234566799999999998873211            


Q ss_pred             --------------c-ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 --------------Y-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 --------------~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                    . ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++                  
T Consensus        81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~------------------  142 (298)
T cd07841          81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLK------------------  142 (298)
T ss_pred             EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEE------------------
Confidence                          1 2578899999999999999999999999999999999998766554                  


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                               |+|||++......   .....++..|+|||.+.+ ..++.++|||||||++|+|++|.++|.+.+..+.+.
T Consensus       143 ---------l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~  213 (298)
T cd07841         143 ---------LADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLG  213 (298)
T ss_pred             ---------EccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHH
Confidence                     4555544332211   112346778999999865 357899999999999999999999998888777777


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.+..+.+........... ..+..      +               ...............+..+.+||.+||++||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~-~~~~~------~---------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  271 (298)
T cd07841         214 KIFEALGTPTEENWPGVTSL-PDYVE------F---------------KPFPPTPLKQIFPAASDDALDLLQRLLTLNPN  271 (298)
T ss_pred             HHHHHcCCCchhhhhhcccc-ccccc------c---------------cccCCcchhhhcccccHHHHHHHHHHhcCCcc
Confidence            66665554443322111000 00000      0               00000001112234567899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~~  395 (405)
                      +|||+.|+|+||||++....
T Consensus       272 ~R~s~~e~l~~~~~~~~~~~  291 (298)
T cd07841         272 KRITARQALEHPYFSNDPAP  291 (298)
T ss_pred             cCcCHHHHhhCccccCCCCC
Confidence            99999999999999997543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.6e-37  Score=291.88  Aligned_cols=263  Identities=23%  Similarity=0.353  Sum_probs=178.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.++||+|+||.||++.+..++..||+|.++..  ......+.+|+++++++.|+++....               
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3599999999999999999999999999999998643  23345678899999999999874321               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                  ...+++..+..++.||+.||.|||+ ++++||||||+|||++.++.                      
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~----------------------  138 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE----------------------  138 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc----------------------
Confidence                        1346788999999999999999997 69999999999999987664                      


Q ss_pred             CCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           ++|+|||++...... .....|+..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+...
T Consensus       139 -----~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  213 (308)
T cd06615         139 -----IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP  213 (308)
T ss_pred             -----EEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc
Confidence                 455555554432211 22357889999999998888999999999999999999999999765533322211111


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      ....+...    ..      ..  .................................++.++.+|+.+||..||++|||+
T Consensus       214 ~~~~~~~~----~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  281 (308)
T cd06615         214 VSEGEAKE----SH------RP--VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADL  281 (308)
T ss_pred             cccccccC----Cc------cc--ccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCH
Confidence            00000000    00      00  00000000000000000000000000000011256789999999999999999999


Q ss_pred             HHHHcCCCCCCCC
Q 015532          381 REALRHPFFTRDV  393 (405)
Q Consensus       381 ~elL~hp~f~~~~  393 (405)
                      .|+++||||.+..
T Consensus       282 ~~ll~~~~~~~~~  294 (308)
T cd06615         282 KELTKHPFIKRAE  294 (308)
T ss_pred             HHHhcChhhhhcc
Confidence            9999999998753

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.5e-37  Score=296.21  Aligned_cols=257  Identities=30%  Similarity=0.496  Sum_probs=193.0

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||+|+||.||+|++..+++.||||++....   ...+.+..|+.+++.+.|+++....               
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            5899999999999999999999889999999986532   2345678899999999988762111               


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++++               
T Consensus        81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~---------------  145 (330)
T cd07834          81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKIC---------------  145 (330)
T ss_pred             EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEc---------------
Confidence                            1246788889999999999999999999999999999999876655554               


Q ss_pred             cCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                                  |||.+......      .....++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+..
T Consensus       146 ------------dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~  213 (330)
T cd07834         146 ------------DFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI  213 (330)
T ss_pred             ------------ccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH
Confidence                        55444332221      1224678899999999887 7899999999999999999999999999888


Q ss_pred             HHHHHHHHHhCCCChHHHHHhh-HhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          292 EHLAMMERVLGPLPHHMVIRAD-RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      +.+..+....+.++........ .....+....                    ...............+..+.+||.+||
T Consensus       214 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~li~~~l  273 (330)
T cd07834         214 DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSL--------------------PKKPKKPLSKLFPGASPEAIDLLEKML  273 (330)
T ss_pred             HHHHHHHHhcCCCChhHhhhccccchhhHHhhc--------------------ccCCcchhHHhcccCCHHHHHHHHHHc
Confidence            8888888888777655432111 0000110000                    000000111122345778999999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ++||++|||++++++||||++....+
T Consensus       274 ~~~P~~Rpt~~~ll~~~~~~~~~~~~  299 (330)
T cd07834         274 VFDPKKRITADEALAHPYLAQLHDPE  299 (330)
T ss_pred             cCChhhCCCHHHHHhCccHHhhcccc
Confidence            99999999999999999998765543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=2.8e-37  Score=289.05  Aligned_cols=228  Identities=26%  Similarity=0.427  Sum_probs=174.9

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCC--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGT--------------  153 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~--------------  153 (405)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+..|+.+++++ .|+++...              
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~   98 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQ   98 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCe
Confidence            456889999999999999999999999999999999976555556677899999999 67765210              


Q ss_pred             ----------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          154 ----------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       154 ----------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                            ....+++..++.++.|++.||.|||++||+||||||+||+++.++.            
T Consensus        99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~------------  166 (291)
T cd06639          99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG------------  166 (291)
T ss_pred             eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC------------
Confidence                                  0134678889999999999999999999999999999999976554            


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-----CCCCchhHHHHHHHHHHHHhCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~~lltg~~  283 (405)
                                     ++|+|||++......   .....|+..|+|||++...     .++.++|||||||++|+|++|++
T Consensus       167 ---------------~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~  231 (291)
T cd06639         167 ---------------VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDP  231 (291)
T ss_pred             ---------------EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCC
Confidence                           556666655432211   1224678899999998643     36789999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      ||........+..+.+.  ..+                                             .....+..+..+.
T Consensus       232 p~~~~~~~~~~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~l~  264 (291)
T cd06639         232 PLFDMHPVKTLFKIPRN--PPP---------------------------------------------TLLHPEKWCRSFN  264 (291)
T ss_pred             CCCCCcHHHHHHHHhcC--CCC---------------------------------------------CCCcccccCHHHH
Confidence            99876554433322110  000                                             0001123355789


Q ss_pred             HHHHHccccCCCCCCCHHHHHcCCCCC
Q 015532          364 DLLQGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                      +||.+||+.||++||++.|+++||||+
T Consensus       265 ~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         265 HFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-38  Score=269.96  Aligned_cols=223  Identities=26%  Similarity=0.329  Sum_probs=170.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..||++.+.||+|||+.||+++...+++.||+|++.... +..+..++|++..++++|+++....               
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            368999999999999999999999999999999986544 5678889999999999998872210               


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                           ...+++.++..++.+|++||++||+..  ++||||||.|||++..+             
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~-------------  166 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSG-------------  166 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCC-------------
Confidence                                 235789999999999999999999998  99999999999987654             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCc------------cceecCCCcchhHHHhC---CCCCCchhHHHHHHHHH
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------------SYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILV  276 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~  276 (405)
                                    .++|.|||++....-..            ..-..|..|+|||++.-   ...+.++|||||||++|
T Consensus       167 --------------~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLY  232 (302)
T KOG2345|consen  167 --------------LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLY  232 (302)
T ss_pred             --------------ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHH
Confidence                          46777777765332110            11356889999999864   34679999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhccc
Q 015532          277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  356 (405)
Q Consensus       277 ~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (405)
                      .|+.|..||.....         .-|.+             .+....+...||.                        ..
T Consensus       233 a~mf~~sPfe~~~~---------~GgSl-------------aLAv~n~q~s~P~------------------------~~  266 (302)
T KOG2345|consen  233 AMMFGESPFERIYQ---------QGGSL-------------ALAVQNAQISIPN------------------------SS  266 (302)
T ss_pred             HHHHcCCcchHHhh---------cCCeE-------------EEeeeccccccCC------------------------CC
Confidence            99999999953110         00000             0000011222222                        12


Q ss_pred             CchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          357 HSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       357 ~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+++.+.+||+.||+.||.+||++.+++.+
T Consensus       267 ~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  267 RYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            367889999999999999999999999864

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=9.8e-38  Score=290.27  Aligned_cols=220  Identities=22%  Similarity=0.392  Sum_probs=164.5

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      ||+|+||.||+++++.+++.||+|++.....    .......|+++++.+.|+++....                     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            7999999999999999999999999864221    223455699999999999873211                     


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                           
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~---------------------------  133 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGN---------------------------  133 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCC---------------------------
Confidence                    123677788899999999999999999999999999999976654                           


Q ss_pred             ceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-HhCC
Q 015532          227 IKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER-VLGP  303 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~-~~g~  303 (405)
                      ++|+|||++.......  ....|+..|+|||++.+..++.++|||||||++|+|++|..||...........+.+ ....
T Consensus       134 ~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~  213 (277)
T cd05607         134 CRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED  213 (277)
T ss_pred             EEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc
Confidence            4555555554332211  124688999999999988899999999999999999999999976432111111100 0000


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH---
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA---  380 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta---  380 (405)
                                             .                   .    ......++.++.+||.+||+.||++||++   
T Consensus       214 -----------------------~-------------------~----~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~  247 (277)
T cd05607         214 -----------------------E-------------------V----KFEHQNFTEESKDICRLFLAKKPEDRLGSREK  247 (277)
T ss_pred             -----------------------c-------------------c----ccccccCCHHHHHHHHHHhccCHhhCCCCccc
Confidence                                   0                   0    00012346789999999999999999999   


Q ss_pred             -HHHHcCCCCCCC
Q 015532          381 -REALRHPFFTRD  392 (405)
Q Consensus       381 -~elL~hp~f~~~  392 (405)
                       ++++.||||+.-
T Consensus       248 ~~~~~~h~~f~~~  260 (277)
T cd05607         248 NDDPRKHEFFKTI  260 (277)
T ss_pred             hhhhhcChhhcCC
Confidence             778899999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-37  Score=292.92  Aligned_cols=253  Identities=23%  Similarity=0.351  Sum_probs=185.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+....    .....+..|+++++.+.|+++....             
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36999999999999999999999999999999986532    2335677899999999998873221             


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++++|||++..........
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence                            1357888999999999999999999999999999999999999999999998765443221110


Q ss_pred             cCCCCCCC-----ce-eccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          219 KNLPKSSA-----IK-LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~-----~k-l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                      ........     .+ ...+. ............||..|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~  239 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETF-SEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE  239 (316)
T ss_pred             ccccccccccccccccchhhh-cccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence            00000000     00 00000 0000111123578999999999998889999999999999999999999998776554


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+....                        ..++                        .....+..+.++|.+||..
T Consensus       240 ~~~~~~~~~------------------------~~~~------------------------~~~~~~~~~~~li~~~l~~  271 (316)
T cd05574         240 TFSNILKKE------------------------VTFP------------------------GSPPVSSSARDLIRKLLVK  271 (316)
T ss_pred             HHHHHhcCC------------------------ccCC------------------------CccccCHHHHHHHHHHccC
Confidence            443322110                        0000                        0112467899999999999


Q ss_pred             CCCCCCC----HHHHHcCCCCCCCC
Q 015532          373 DPAERLK----AREALRHPFFTRDV  393 (405)
Q Consensus       373 dP~~Rpt----a~elL~hp~f~~~~  393 (405)
                      ||++|||    ++|+|+||||++..
T Consensus       272 ~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         272 DPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             CHhHCCCchhhHHHHHcCchhhcCC
Confidence            9999999    99999999999853

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-37  Score=286.16  Aligned_cols=223  Identities=30%  Similarity=0.432  Sum_probs=172.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      +.|++.+.||+|+||.||+|.+..+++.||+|.+....      .....+.+|+++++++.|+++....           
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            45899999999999999999999999999999986422      1234577899999999999873321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.|++.||.|||+.||+||||||+||+++.++.+                  
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~------------------  143 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNV------------------  143 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE------------------
Confidence                            1246778889999999999999999999999999999999876655                  


Q ss_pred             cCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                               +|+|||.+......      .....|+..|+|||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus       144 ---------~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  214 (263)
T cd06625         144 ---------KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA  214 (263)
T ss_pred             ---------EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH
Confidence                     55555544322111      022457889999999999889999999999999999999999997654443


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.....                                                ........+..+.+||.+||..
T Consensus       215 ~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~li~~~l~~  246 (263)
T cd06625         215 AIFKIATQPT------------------------------------------------NPQLPSHVSPDARNFLRRTFVE  246 (263)
T ss_pred             HHHHHhccCC------------------------------------------------CCCCCccCCHHHHHHHHHHhhc
Confidence            3322211000                                                0011234466889999999999


Q ss_pred             CCCCCCCHHHHHcCCCC
Q 015532          373 DPAERLKAREALRHPFF  389 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f  389 (405)
                      ||++|||+.|+++|+||
T Consensus       247 ~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         247 NAKKRPSAEELLRHFFV  263 (263)
T ss_pred             CcccCCCHHHHhhCCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.5e-37  Score=289.55  Aligned_cols=231  Identities=27%  Similarity=0.470  Sum_probs=178.2

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      -|++.++||+|+||.||+|.+..++..+|+|.+... ....+.+.+|+++++.+.|+++....                 
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            378899999999999999999999999999998643 23456678899999999999873211                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+                       
T Consensus        86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~-----------------------  142 (282)
T cd06643          86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDI-----------------------  142 (282)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCE-----------------------
Confidence                       1347888999999999999999999999999999999999776654                       


Q ss_pred             CCCceeccCCCCccccC---CccceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                          +|+|||++.....   ......|+..|+|||++.     +..++.++|||||||++|+|++|.+||...+..+...
T Consensus       143 ----kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~  218 (282)
T cd06643         143 ----KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLL  218 (282)
T ss_pred             ----EEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHH
Confidence                5555555433211   112346889999999984     3457789999999999999999999998766544433


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.....+.                                               ......++.++.+||.+||+.||+
T Consensus       219 ~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~  251 (282)
T cd06643         219 KIAKSEPPT-----------------------------------------------LAQPSRWSSEFKDFLKKCLEKNVD  251 (282)
T ss_pred             HHhhcCCCC-----------------------------------------------CCCccccCHHHHHHHHHHccCChh
Confidence            332211000                                               001123456899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCCCCc
Q 015532          376 ERLKAREALRHPFFTRDVRRPT  397 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~~~~  397 (405)
                      +|||++++++||||+.....+.
T Consensus       252 ~Rp~~~~il~~~~~~~~~~~~~  273 (282)
T cd06643         252 ARWTTTQLLQHPFVTVNSNKPI  273 (282)
T ss_pred             hCcCHHHHhcCCCEeccCCCCH
Confidence            9999999999999998766654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=4.3e-37  Score=286.16  Aligned_cols=247  Identities=34%  Similarity=0.557  Sum_probs=183.4

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHh-hcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~-~~~~~~~~----------------  154 (405)
                      |++.++||+|+||.||+|.+..+++.||+|+++...  ........|+.++.++. |+++....                
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            678999999999999999999999999999986532  22233457888999886 76652211                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++. +.                      
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~----------------------  137 (282)
T cd07831          81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DI----------------------  137 (282)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CC----------------------
Confidence                         134788899999999999999999999999999999999976 54                      


Q ss_pred             CCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                           ++|+|||.+.......  ....++..|+|||++.. ..++.++|||||||++|+|++|.+||.+.+..+.+..+.
T Consensus       138 -----~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~  212 (282)
T cd07831         138 -----LKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIH  212 (282)
T ss_pred             -----eEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHH
Confidence                 5566666554332211  22457889999998754 457889999999999999999999999988888888888


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ...+..+..+.......      ......++.....               .........+..+.+||.+||++||++||
T Consensus       213 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~~P~~R~  271 (282)
T cd07831         213 DVLGTPDAEVLKKFRKS------RHMNYNFPSKKGT---------------GLRKLLPNASAEGLDLLKKLLAYDPDERI  271 (282)
T ss_pred             HHcCCCCHHHHHhhccc------ccccccCcccccc---------------cHHHHcccccHHHHHHHHHHhccCccccc
Confidence            88887776552211000      0011111111000               00111234577999999999999999999


Q ss_pred             CHHHHHcCCCC
Q 015532          379 KAREALRHPFF  389 (405)
Q Consensus       379 ta~elL~hp~f  389 (405)
                      |++++++||||
T Consensus       272 ~~~~~l~~~~~  282 (282)
T cd07831         272 TAKQALRHPYF  282 (282)
T ss_pred             CHHHHhhCCCC
Confidence            99999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.3e-37  Score=286.87  Aligned_cols=252  Identities=30%  Similarity=0.520  Sum_probs=184.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.++||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+++++.+.|+++....              
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46999999999999999999999899999999885432   2345677899999999999873211              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+|+||+|+||+++.++.                      
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~----------------------  138 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGV----------------------  138 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCc----------------------
Confidence                         124788999999999999999999999999999999999977664                      


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           ++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|.+||......+....+
T Consensus       139 -----~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~  213 (286)
T cd07846         139 -----VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHI  213 (286)
T ss_pred             -----EEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Confidence                 455555554432211   1224578899999998764 4788999999999999999999999888777777777


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ....+.++...........  ...   ....+..              .............+..+.+|+.+||+.||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  274 (286)
T cd07846         214 IKCLGNLIPRHQEIFQKNP--LFA---GMRLPEV--------------KEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDR  274 (286)
T ss_pred             HHHhCCCchhhHHHhccch--Hhh---ccccccc--------------cCcchHHHhCCCcCHHHHHHHHHHhcCCcccc
Confidence            7666655432211100000  000   0000000              00001111233567789999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||+.++++||||
T Consensus       275 p~~~~il~~~~~  286 (286)
T cd07846         275 PSSSQLLHHEFF  286 (286)
T ss_pred             hhHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.2e-37  Score=297.97  Aligned_cols=219  Identities=23%  Similarity=0.349  Sum_probs=162.6

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~---------  154 (405)
                      ++|++.++||+|+||.||+|.+.     .+++.||||+++...  .....+.+|+.++..+ .|+++....         
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP   86 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence            67999999999999999999752     345789999986432  2345688899999999 787763211         


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus        87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (338)
T cd05102          87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL  166 (338)
T ss_pred             eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence                                                                                            


Q ss_pred             -cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCC
Q 015532          155 -YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG  233 (405)
Q Consensus       155 -~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  233 (405)
                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                           ++|+|||
T Consensus       167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~---------------------------~kl~DfG  219 (338)
T cd05102         167 WKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNV---------------------------VKICDFG  219 (338)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCc---------------------------EEEeecc
Confidence             012556677889999999999999999999999999999976654                           4555555


Q ss_pred             CCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChH
Q 015532          234 STTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHH  307 (405)
Q Consensus       234 ~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~  307 (405)
                      ++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+...... +.    
T Consensus       220 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~----  294 (338)
T cd05102         220 LARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GT----  294 (338)
T ss_pred             cccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CC----
Confidence            554322111     12345678999999999899999999999999999997 99999875433222111100 00    


Q ss_pred             HHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          308 MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                                       .                          .......++.+.+|+.+||+.||++|||+.|+++
T Consensus       295 -----------------~--------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         295 -----------------R--------------------------MRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             -----------------C--------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                             0                          0011234668999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=5.4e-37  Score=287.60  Aligned_cols=256  Identities=31%  Similarity=0.491  Sum_probs=187.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.+.||+|+||+||+|.+..+++.||||.++...   ...+.+..|+++++.+.|+++....              
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46999999999999999999999999999999986432   2335677899999999998873211              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+||+++..+                      
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~----------------------  139 (294)
T PLN00009         82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT----------------------  139 (294)
T ss_pred             cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC----------------------
Confidence                          11246778889999999999999999999999999999997432                      


Q ss_pred             CCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                          ..+||+|||++......   .....++..|+|||.+.+. .++.++|||||||++|+|++|.+||......+.+..
T Consensus       140 ----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~  215 (294)
T PLN00009        140 ----NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFK  215 (294)
T ss_pred             ----CEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                24677777766543221   1223578899999998764 578999999999999999999999998887777777


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....+.+....+..... ...+....  ..|                  ............+..+.+++.+||+.||++
T Consensus       216 ~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~------------------~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~  274 (294)
T PLN00009        216 IFRILGTPNEETWPGVTS-LPDYKSAF--PKW------------------PPKDLATVVPTLEPAGVDLLSKMLRLDPSK  274 (294)
T ss_pred             HHHHhCCCChhhcccccc-chhhhhhc--ccC------------------CCCCHHHhCcCCChHHHHHHHHHccCChhh
Confidence            666666544433211100 00000000  000                  000111112345778999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVR  394 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~  394 (405)
                      ||++.++++||||+....
T Consensus       275 Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        275 RITARAALEHEYFKDLGD  292 (294)
T ss_pred             CcCHHHHhcCchHhHHhc
Confidence            999999999999987543

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=3.6e-37  Score=289.28  Aligned_cols=228  Identities=27%  Similarity=0.415  Sum_probs=178.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .+|++.+.||.|+||.||+|.+..+++.||||.+.... ...+.+.+|+.+++.+.|+++....                
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            57999999999999999999999999999999986432 2345678899999999999874321                


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++.++..++.|++.||.|||++|++||||||+||+++.++.                         
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~-------------------------  153 (296)
T cd06655          99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS-------------------------  153 (296)
T ss_pred             CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-------------------------
Confidence                      124788999999999999999999999999999999999977664                         


Q ss_pred             CCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          225 SAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                        ++|+|||++......   .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+.......+... 
T Consensus       154 --~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-  230 (296)
T cd06655         154 --VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-  230 (296)
T ss_pred             --EEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-
Confidence              455555544332211   12246888999999999888999999999999999999999999877654443322110 


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                       ..+                                             .......+++.+.+||.+||..||++|||+.
T Consensus       231 -~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~  264 (296)
T cd06655         231 -GTP---------------------------------------------ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAK  264 (296)
T ss_pred             -CCc---------------------------------------------ccCCcccCCHHHHHHHHHHhhcChhhCCCHH
Confidence             000                                             0011234566889999999999999999999


Q ss_pred             HHHcCCCCCCCC
Q 015532          382 EALRHPFFTRDV  393 (405)
Q Consensus       382 elL~hp~f~~~~  393 (405)
                      ++++||||+...
T Consensus       265 ~il~~~~~~~~~  276 (296)
T cd06655         265 ELLQHPFLKLAK  276 (296)
T ss_pred             HHhhChHhhhcc
Confidence            999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=5.2e-37  Score=287.26  Aligned_cols=254  Identities=29%  Similarity=0.468  Sum_probs=179.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...  .....+.+|+.+++.+.|+++....              
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            367999999999999999999999999999999986432  2234567899999999999873211              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.                      
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~----------------------  141 (291)
T cd07870          84 YMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGE----------------------  141 (291)
T ss_pred             cccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCc----------------------
Confidence                         123567788899999999999999999999999999999976654                      


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN-LEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~-~~~~~~  296 (405)
                           ++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|..||.+... .+.+..
T Consensus       142 -----~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~  216 (291)
T cd07870         142 -----LKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEK  216 (291)
T ss_pred             -----EEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHH
Confidence                 555566555432111   1223578899999998764 578899999999999999999999976543 355555


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....+.+++........ ...+..     .+.... ........+.          . ...+..+.+++.+||+.||++
T Consensus       217 ~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~-~~~~~~~~~~----------~-~~~~~~~~~ll~~~l~~dp~~  278 (291)
T cd07870         217 IWTVLGVPTEDTWPGVSK-LPNYKP-----EWFLPC-KPQQLRVVWK----------R-LSRPPKAEDLASQMLMMFPKD  278 (291)
T ss_pred             HHHHcCCCChhhhhhhhh-cccccc-----hhcccc-CCcchhhhcc----------c-cCCChHHHHHHHHHhCcCccc
Confidence            666666554443222110 000000     000000 0000011110          0 012567889999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 015532          377 RLKAREALRHPFF  389 (405)
Q Consensus       377 Rpta~elL~hp~f  389 (405)
                      |||++|++.||||
T Consensus       279 R~t~~~~l~h~~~  291 (291)
T cd07870         279 RISAQDALLHPYF  291 (291)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.8e-37  Score=289.06  Aligned_cols=225  Identities=26%  Similarity=0.481  Sum_probs=172.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCC---------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGT---------------  153 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~---------------  153 (405)
                      ..+.|++.+.||+|+||.||+|++..+++.||+|++.........+..|+.+++++ .|+++...               
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   93 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ   93 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence            34679999999999999999999999999999999876555556678899999998 46654210               


Q ss_pred             --------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          154 --------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       154 --------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                          ....+++..++.++.||+.||.|||++||+|+||||+||+++.++.              
T Consensus        94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~--------------  159 (282)
T cd06636          94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE--------------  159 (282)
T ss_pred             EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--------------
Confidence                                0123677788999999999999999999999999999999976554              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                                   ++|+|||.+.....   ......|+..|+|||++.     +..++.++|||||||++|+|++|..||
T Consensus       160 -------------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~  226 (282)
T cd06636         160 -------------VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL  226 (282)
T ss_pred             -------------EEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCc
Confidence                         56666666543221   122356899999999986     345888999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       286 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      ...........+.+..   +                                          ..   .....++.++.+|
T Consensus       227 ~~~~~~~~~~~~~~~~---~------------------------------------------~~---~~~~~~~~~~~~l  258 (282)
T cd06636         227 CDMHPMRALFLIPRNP---P------------------------------------------PK---LKSKKWSKKFIDF  258 (282)
T ss_pred             cccCHHhhhhhHhhCC---C------------------------------------------CC---CcccccCHHHHHH
Confidence            7655433222111100   0                                          00   0012346689999


Q ss_pred             HHHccccCCCCCCCHHHHHcCCCC
Q 015532          366 LQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      |.+||+.||++|||+.|+|+||||
T Consensus       259 i~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         259 IEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHhCCChhhCcCHHHHhcCCCC
Confidence            999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-37  Score=287.34  Aligned_cols=228  Identities=27%  Similarity=0.413  Sum_probs=179.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.+.||.|+||.||+|++..+++.||+|++....  .....+.+|+++++.+.|+++....               
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            46899999999999999999999999999999986432  2335577899999999999873211               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++.                        
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~------------------------  136 (274)
T cd06609          81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGD------------------------  136 (274)
T ss_pred             eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC------------------------
Confidence                       125788999999999999999999999999999999999977654                        


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                         ++|+|||.+......   .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+.......+...
T Consensus       137 ---~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~  213 (274)
T cd06609         137 ---VKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN  213 (274)
T ss_pred             ---EEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc
Confidence               556666655443321   22346888999999999888999999999999999999999999766544333222211


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC-chHHHHHHHHHccccCCCCCCC
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ..+                                                 ..... ++..+.++|.+||..||++|||
T Consensus       214 ~~~-------------------------------------------------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt  244 (274)
T cd06609         214 NPP-------------------------------------------------SLEGNKFSKPFKDFVSLCLNKDPKERPS  244 (274)
T ss_pred             CCC-------------------------------------------------CCcccccCHHHHHHHHHHhhCChhhCcC
Confidence            000                                                 00011 4567899999999999999999


Q ss_pred             HHHHHcCCCCCCCCCC
Q 015532          380 AREALRHPFFTRDVRR  395 (405)
Q Consensus       380 a~elL~hp~f~~~~~~  395 (405)
                      ++++++||||+...+.
T Consensus       245 ~~~il~~~~~~~~~~~  260 (274)
T cd06609         245 AKELLKHKFIKKAKKT  260 (274)
T ss_pred             HHHHhhChhhcCCCcc
Confidence            9999999999987654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=4.2e-37  Score=288.79  Aligned_cols=229  Identities=27%  Similarity=0.407  Sum_probs=177.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..+|++.+.||+|+||.||+|++..+++.||+|.+.... ...+.+.+|+.+++.+.|+++....               
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            368999999999999999999999999999999986433 2345677899999999999873221               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++.++..++.|++.||.|||++||+||||||+||+++.++.                        
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~------------------------  154 (296)
T cd06654          99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS------------------------  154 (296)
T ss_pred             cCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC------------------------
Confidence                       123677889999999999999999999999999999999976554                        


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                         ++|+|||.+......   .....|++.|+|||.+.+..++.++|||||||++|+|++|..||........+..+...
T Consensus       155 ---~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~  231 (296)
T cd06654         155 ---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN  231 (296)
T ss_pred             ---EEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC
Confidence               556666655432211   12246889999999999888999999999999999999999999876553332221110


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                       +. +                                             .......++..+.+||.+||..||++|||+
T Consensus       232 -~~-~---------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  264 (296)
T cd06654         232 -GT-P---------------------------------------------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSA  264 (296)
T ss_pred             -CC-C---------------------------------------------CCCCccccCHHHHHHHHHHCcCCcccCcCH
Confidence             00 0                                             001112345678999999999999999999


Q ss_pred             HHHHcCCCCCCCC
Q 015532          381 REALRHPFFTRDV  393 (405)
Q Consensus       381 ~elL~hp~f~~~~  393 (405)
                      .++++||||....
T Consensus       265 ~eil~~~~~~~~~  277 (296)
T cd06654         265 KELLQHQFLKIAK  277 (296)
T ss_pred             HHHhhChhhhccC
Confidence            9999999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-37  Score=309.08  Aligned_cols=216  Identities=31%  Similarity=0.424  Sum_probs=170.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc-hhhhhHHHHHHHHHHHHHh-hcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLA-RHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~-~~~~~~~~~~E~~il~~l~-~~~~~~~~---------------  154 (405)
                      .+++|.+.|.+|||+.||+|++...+..||+|++-. .+...+...+||++|+.|. |+||+...               
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            478999999999999999999998888999998744 3445677889999999998 77763211               


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                           ...|++.++++|+.|+++|+.+||...  |||||||-|||||+.+|             
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g-------------  183 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG-------------  183 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC-------------
Confidence                                 235899999999999999999999987  99999999999998766             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCc------------cceecCCCcchhHHHh---CCCCCCchhHHHHHHHHH
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------------SYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~  276 (405)
                                    ..||||||++.......            -....|+.|+|||++.   +.+.+.|+|||+|||+||
T Consensus       184 --------------~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLY  249 (738)
T KOG1989|consen  184 --------------NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLY  249 (738)
T ss_pred             --------------CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHH
Confidence                          45667777664322111            1135799999999984   668999999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhccc
Q 015532          277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  356 (405)
Q Consensus       277 ~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (405)
                      -|+....||++.....++.                            ++..+|.                        ..
T Consensus       250 kLCy~t~PFe~sg~laIln----------------------------g~Y~~P~------------------------~p  277 (738)
T KOG1989|consen  250 KLCYFTTPFEESGKLAILN----------------------------GNYSFPP------------------------FP  277 (738)
T ss_pred             HHHHhCCCcCcCcceeEEe----------------------------ccccCCC------------------------Cc
Confidence            9999999998753322111                            1122221                        24


Q ss_pred             CchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          357 HSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       357 ~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .++..+.+||+.||+.||++||++-|++.+
T Consensus       278 ~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  278 NYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             cHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            568899999999999999999999998853

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.9e-37  Score=291.29  Aligned_cols=234  Identities=26%  Similarity=0.391  Sum_probs=178.9

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+..|+.+++.+.|+++....              
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            3478999999999999999999999999999999986433 2345677899999999999873321              


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.                       
T Consensus        97 ~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~-----------------------  153 (297)
T cd06656          97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS-----------------------  153 (297)
T ss_pred             ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-----------------------
Confidence                        124677889999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                          ++|+|||.+......   .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+....+..+..
T Consensus       154 ----~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~  229 (297)
T cd06656         154 ----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  229 (297)
T ss_pred             ----EEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc
Confidence                455555554432211   1224688899999999988899999999999999999999999976544322211100


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                       .+..                                              ........+..+.+|+.+||+.||++|||
T Consensus       230 -~~~~----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps  262 (297)
T cd06656         230 -NGTP----------------------------------------------ELQNPERLSAVFRDFLNRCLEMDVDRRGS  262 (297)
T ss_pred             -CCCC----------------------------------------------CCCCccccCHHHHHHHHHHccCChhhCcC
Confidence             0000                                              00111234567889999999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCc
Q 015532          380 AREALRHPFFTRDVRRPT  397 (405)
Q Consensus       380 a~elL~hp~f~~~~~~~~  397 (405)
                      ++++++||||+.....+.
T Consensus       263 ~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         263 AKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             HHHHhcCchhcccccccc
Confidence            999999999987654443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.2e-36  Score=283.66  Aligned_cols=249  Identities=32%  Similarity=0.511  Sum_probs=182.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      +|++.++||.|++|.||+|++..+++.||||+++...  ...+.+..|+.+++.+.|+++....                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            4899999999999999999999999999999986532  2345667899999999998863211                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                     
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~---------------------  139 (284)
T cd07836          81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGEL---------------------  139 (284)
T ss_pred             CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcE---------------------
Confidence                         1247889999999999999999999999999999999999776654                     


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            +|+|||++......   .....++..|++||++.+. .++.++|||||||++|+|++|..||.+.+..+....+
T Consensus       140 ------~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~  213 (284)
T cd07836         140 ------KLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKI  213 (284)
T ss_pred             ------EEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence                  55555544322211   1123578899999998764 5789999999999999999999999988877777776


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+....+......... ....+.     ...+..  ..             ..........+..++++|.+||+.||++|
T Consensus       214 ~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~--~~-------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  272 (284)
T cd07836         214 FRIMGTPTESTWPGIS-QLPEYK-----PTFPRY--PP-------------QDLQQLFPHADPLGIDLLHRLLQLNPELR  272 (284)
T ss_pred             HHHhCCCChhhHHHHh-cCchhc-----ccccCC--Ch-------------HHHHHHhhhcCcHHHHHHHHHhcCCcccC
Confidence            6665554443322211 000000     000000  00             00011112346789999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||+.|+++||||
T Consensus       273 ~~~~~~l~~~~f  284 (284)
T cd07836         273 ISAHDALQHPWF  284 (284)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=2.1e-37  Score=290.16  Aligned_cols=252  Identities=31%  Similarity=0.509  Sum_probs=184.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +.|++.+.||.|+||.||+|.+..+++.||+|.++...   .....+.+|+.+++++.|+++....              
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46999999999999999999999999999999996432   2233466899999999998863210              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.                    
T Consensus        85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~--------------------  144 (293)
T cd07843          85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI--------------------  144 (293)
T ss_pred             ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCc--------------------
Confidence                           123788899999999999999999999999999999999987664                    


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                             ++|+|||++......   .....++..|+|||.+.+.. ++.++|||||||++|+|++|.+||......+.+.
T Consensus       145 -------~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~  217 (293)
T cd07843         145 -------LKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLN  217 (293)
T ss_pred             -------EEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                   455555554432221   12235788999999987654 6899999999999999999999999988888877


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC-chHHHHHHHHHccccCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP  374 (405)
                      .+....+.++...+........     .....+..              ............. .++.+.+||.+||+.||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  278 (293)
T cd07843         218 KIFKLLGTPTEKIWPGFSELPG-----AKKKTFTK--------------YPYNQLRKKFPALSLSDNGFDLLNRLLTYDP  278 (293)
T ss_pred             HHHHHhCCCchHHHHHhhccch-----hccccccc--------------ccchhhhccccccCCChHHHHHHHHHhccCc
Confidence            7777776655443322110000     00000000              0000000111111 46789999999999999


Q ss_pred             CCCCCHHHHHcCCCC
Q 015532          375 AERLKAREALRHPFF  389 (405)
Q Consensus       375 ~~Rpta~elL~hp~f  389 (405)
                      ++|||+.|+|+||||
T Consensus       279 ~~R~t~~ell~~~~f  293 (293)
T cd07843         279 AKRISAEDALKHPYF  293 (293)
T ss_pred             cccCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=5.1e-37  Score=281.48  Aligned_cols=223  Identities=27%  Similarity=0.457  Sum_probs=175.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++.... .+.+.+|+.+++.+.|+++....                 
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            569999999999999999999998899999999976544 67788999999999998873211                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.                        
T Consensus        82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~------------------------  137 (256)
T cd06612          82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQ------------------------  137 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCc------------------------
Confidence                       235688999999999999999999999999999999999976654                        


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                         ++|+|||++......   .....|+..|+|||++.+..++.++|||||||++|+|++|..||...........+...
T Consensus       138 ---~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~  214 (256)
T cd06612         138 ---AKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK  214 (256)
T ss_pred             ---EEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC
Confidence               555666655433221   12245788999999999988999999999999999999999999765443322211000


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                         .                                            .........++..+.++|.+||+.||++|||+
T Consensus       215 ---~--------------------------------------------~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~  247 (256)
T cd06612         215 ---P--------------------------------------------PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSA  247 (256)
T ss_pred             ---C--------------------------------------------CCCCCchhhcCHHHHHHHHHHHhcChhhCcCH
Confidence               0                                            00000112345688999999999999999999


Q ss_pred             HHHHcCCCC
Q 015532          381 REALRHPFF  389 (405)
Q Consensus       381 ~elL~hp~f  389 (405)
                      .|+|+||||
T Consensus       248 ~~il~~~~~  256 (256)
T cd06612         248 IQLLQHPFI  256 (256)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.8e-37  Score=289.29  Aligned_cols=232  Identities=26%  Similarity=0.458  Sum_probs=177.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .+.|+++++||+|+||.||+|++..+++.||+|++.... ...+.+..|+.+++.+.|+++....               
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            467999999999999999999999999999999986533 3456677899999999998873211               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                      
T Consensus        91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~----------------------  148 (292)
T cd06644          91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGD----------------------  148 (292)
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCC----------------------
Confidence                         134688899999999999999999999999999999999976554                      


Q ss_pred             CCCCCceeccCCCCccccC---CccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                           ++|+|||.+.....   ......++..|+|||++.+     ..++.++|||||||++|+|++|..||...+....
T Consensus       149 -----~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~  223 (292)
T cd06644         149 -----IKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV  223 (292)
T ss_pred             -----EEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH
Confidence                 55666665543211   1123467889999999853     3478899999999999999999999977654433


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.+.  ..|                                             .......++.++.+||.+||..|
T Consensus       224 ~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~  256 (292)
T cd06644         224 LLKIAKS--EPP---------------------------------------------TLSQPSKWSMEFRDFLKTALDKH  256 (292)
T ss_pred             HHHHhcC--CCc---------------------------------------------cCCCCcccCHHHHHHHHHHhcCC
Confidence            3222110  000                                             00011234567899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      |++||+++++++||||..-...+
T Consensus       257 p~~Rp~~~~il~~~~~~~~~~~~  279 (292)
T cd06644         257 PETRPSAAQLLEHPFVSSVTSNR  279 (292)
T ss_pred             cccCcCHHHHhcCccccccccch
Confidence            99999999999999998744433

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.8e-36  Score=277.84  Aligned_cols=221  Identities=27%  Similarity=0.419  Sum_probs=174.1

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .|++.+.||+|+||.||+|.+..+++.|++|.+...   ......+..|+++++.+.|+++....               
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            388899999999999999999999999999998642   34456788899999999999873321               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+                    
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~--------------------  140 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNV--------------------  140 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCE--------------------
Confidence                          1346778889999999999999999999999999999999876644                    


Q ss_pred             CCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                             +|+|||++.......   ....|+..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+
T Consensus       141 -------~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  213 (256)
T cd08529         141 -------KIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI  213 (256)
T ss_pred             -------EEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                   555555544322211   2246788999999999888999999999999999999999999877654433332


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+.  ..+                                               .....++..+.++|.+||+.+|++|
T Consensus       214 ~~~--~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~R  244 (256)
T cd08529         214 IRG--VFP-----------------------------------------------PVSQMYSQQLAQLIDQCLTKDYRQR  244 (256)
T ss_pred             HcC--CCC-----------------------------------------------CCccccCHHHHHHHHHHccCCcccC
Confidence            211  000                                               0011345688999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      |++.++++|||+
T Consensus       245 p~~~~ll~~~~~  256 (256)
T cd08529         245 PDTFQLLRNPSL  256 (256)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.3e-36  Score=283.81  Aligned_cols=229  Identities=24%  Similarity=0.412  Sum_probs=173.4

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc-----------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR-----------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~-----------  154 (405)
                      -....++|++.+.||+|+||.||+|.+..+++.||+|+++......+.+..|+.+++.+ .|+++....           
T Consensus        13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   92 (286)
T cd06638          13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG   92 (286)
T ss_pred             CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence            34566899999999999999999999999999999999876544456677899999999 587763210           


Q ss_pred             -------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          155 -------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 -------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                               ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.          
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~----------  162 (286)
T cd06638          93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGG----------  162 (286)
T ss_pred             CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCC----------
Confidence                                     123567778889999999999999999999999999999977654          


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg  281 (405)
                                       ++|+|||++.....   ......|+..|+|||++..     ..++.++|||||||++|+|++|
T Consensus       163 -----------------~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g  225 (286)
T cd06638         163 -----------------VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG  225 (286)
T ss_pred             -----------------EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcC
Confidence                             55556665543221   1122468999999999853     3578899999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ..||........+..+...  ..+                                             ........+..
T Consensus       226 ~~p~~~~~~~~~~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~  258 (286)
T cd06638         226 DPPLADLHPMRALFKIPRN--PPP---------------------------------------------TLHQPELWSNE  258 (286)
T ss_pred             CCCCCCCchhHHHhhcccc--CCC---------------------------------------------cccCCCCcCHH
Confidence            9999765543322211100  000                                             00011223567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      +.+||.+||+.||++|||+.|+++|+||
T Consensus       259 ~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         259 FNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            8999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6.6e-37  Score=285.79  Aligned_cols=230  Identities=22%  Similarity=0.372  Sum_probs=175.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++++.||+|+||.||+|.+..+++.||+|.++..  ......+.+|+++++++.|+++....               
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            3689999999999999999999989999999988642  23345678899999999998772211               


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                     ...+++..+..++.||+.||.|||+ +||+||||||+||+++.++                    
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--------------------  140 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--------------------  140 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--------------------
Confidence                           1267889999999999999999996 5999999999999997655                    


Q ss_pred             cCCCCCCCceeccCCCCccccC-CccceecCCCcchhHHHhCC------CCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGL------GWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                             .++|+|||.+..... ......++..|+|||++.+.      .++.++|||||||++|+|++|..||......
T Consensus       141 -------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  213 (286)
T cd06622         141 -------QVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA  213 (286)
T ss_pred             -------CEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh
Confidence                   456666666543322 12234678899999998653      3578999999999999999999999765443


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+.......+.                                              .....++.++.+||.+||+
T Consensus       214 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~  247 (286)
T cd06622         214 NIFAQLSAIVDGDPP----------------------------------------------TLPSGYSDDAQDFVAKCLN  247 (286)
T ss_pred             hHHHHHHHHhhcCCC----------------------------------------------CCCcccCHHHHHHHHHHcc
Confidence            333333222111110                                              0112346788999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .+|++||+++++++||||.....
T Consensus       248 ~~p~~Rp~~~~l~~~~~~~~~~~  270 (286)
T cd06622         248 KIPNRRPTYAQLLEHPWLVKYKN  270 (286)
T ss_pred             cCcccCCCHHHHhcChhhhhccC
Confidence            99999999999999999977543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-38  Score=277.44  Aligned_cols=248  Identities=26%  Similarity=0.389  Sum_probs=179.4

Q ss_pred             CCeEEE-eeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCC----------------
Q 015532           92 PRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGT----------------  153 (405)
Q Consensus        92 ~~y~~~-~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~----------------  153 (405)
                      +-|++. +.||+|+|+.|--|....++..||||++.+.. ..+....+|++++.....|..+-.                
T Consensus        77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfE  156 (463)
T KOG0607|consen   77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFE  156 (463)
T ss_pred             HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEe
Confidence            345554 67999999999999999999999999997653 457788999999998865543110                


Q ss_pred             ------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          154 ------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       154 ------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                  ....|++.++..++++|+.||+|||.+||.||||||+|||....+                       
T Consensus       157 Km~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn-----------------------  213 (463)
T KOG0607|consen  157 KMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN-----------------------  213 (463)
T ss_pred             cccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC-----------------------
Confidence                        024689999999999999999999999999999999999987644                       


Q ss_pred             CCCCCceeccCCCCcccc----------CCccceecCCCcchhHHHh---C--CCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          222 PKSSAIKLIDFGSTTFEH----------QDHSYVVSTRHYRAPEVIL---G--LGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~----------~~~~~~~gt~~y~aPE~~~---~--~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                       .-..+|||||.+..-..          ....+.+|+..|||||+..   +  ..|+.++|.||||+|+|.||+|.+||.
T Consensus       214 -~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFv  292 (463)
T KOG0607|consen  214 -KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFV  292 (463)
T ss_pred             -CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCcc
Confidence             23457888876653221          1223468999999999874   2  358999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +.-..+.-..-    |..     .+.+....--..+.+...+|+                      ..|..+|.+.+||+
T Consensus       293 G~Cg~dCGWdr----Ge~-----Cr~CQ~~LFesIQEGkYeFPd----------------------kdWahIS~eakdli  341 (463)
T KOG0607|consen  293 GHCGADCGWDR----GEV-----CRVCQNKLFESIQEGKYEFPD----------------------KDWAHISSEAKDLI  341 (463)
T ss_pred             CccCCcCCccC----CCc-----cHHHHHHHHHHHhccCCcCCh----------------------hhhHHhhHHHHHHH
Confidence            75322100000    000     000000000001122333333                      22345688999999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      +.+|..|+.+|.+|.++++|||++....
T Consensus       342 snLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  342 SNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             HHHHhccHHhhhhhhhccCCccccccch
Confidence            9999999999999999999999987643

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=5.4e-37  Score=293.07  Aligned_cols=273  Identities=29%  Similarity=0.487  Sum_probs=191.0

Q ss_pred             cCCCeEE-EeeeecccceeEEEEEecCCCcEEEEEEecchhhhh---------------HHHHHHHHHHHHHhhcCCCCC
Q 015532           90 LTPRYRI-LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---------------EAAMIEIDVLQRLARHDIGGT  153 (405)
Q Consensus        90 ~~~~y~~-~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~---------------~~~~~E~~il~~l~~~~~~~~  153 (405)
                      +.++|.. .+.||.|+||+||+|.+..+++.||||+++......               ..+.+|+++++.+.|+++...
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   85 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL   85 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence            4577875 467999999999999999999999999986432211               246789999999999887332


Q ss_pred             c--------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          154 R--------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       154 ~--------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                      .                          ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++++|||+
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~  165 (335)
T PTZ00024         86 VDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGL  165 (335)
T ss_pred             eEEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccc
Confidence            1                          13468889999999999999999999999999999999999888888888876


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                      +..........        ..-.+.+.  ..........++..|+|||.+.+. .++.++|||||||++|+|++|.+||.
T Consensus       166 ~~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~  235 (335)
T PTZ00024        166 ARRYGYPPYSD--------TLSKDETM--QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP  235 (335)
T ss_pred             eeecccccccc--------cccccccc--cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            64332111000        00000000  000111223568899999998764 47899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +.+..+.+..+....+.++...+..... ...+      ..+..               ..+..........+..+.+||
T Consensus       236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~------~~~~~---------------~~~~~~~~~~~~~~~~~~~li  293 (335)
T PTZ00024        236 GENEIDQLGRIFELLGTPNEDNWPQAKK-LPLY------TEFTP---------------RKPKDLKTIFPNASDDAIDLL  293 (335)
T ss_pred             CCCHHHHHHHHHHHhCCCchhhCcchhh-cccc------cccCc---------------CCcccHHHhCcCCChHHHHHH
Confidence            9888887777777666554321110000 0000      00000               000011112234467899999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .+||+.||++|||++|+|.||||+....
T Consensus       294 ~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        294 QSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             HHHcCCCchhccCHHHHhcCcccCCCCC
Confidence            9999999999999999999999997643

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=7.1e-37  Score=282.49  Aligned_cols=230  Identities=26%  Similarity=0.442  Sum_probs=172.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----------hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----------~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+....          ...+.+.+|+.+++++.|+++....        
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            4788899999999999999998889999999885321          1225577899999999998873211        


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++++|||++.....+.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence                               2356788899999999999999999999999999999999877766666665443221100


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                      .                  ............|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+......
T Consensus       161 ~------------------~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  222 (267)
T cd06628         161 L------------------STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF  222 (267)
T ss_pred             c------------------cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH
Confidence            0                  0000011122458889999999998889999999999999999999999998765433332


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+....  .                                               .......+..+.++|.+||+.||+
T Consensus       223 ~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~  253 (267)
T cd06628         223 KIGENA--S-----------------------------------------------PEIPSNISSEAIDFLEKTFEIDHN  253 (267)
T ss_pred             HHhccC--C-----------------------------------------------CcCCcccCHHHHHHHHHHccCCch
Confidence            221100  0                                               001123466889999999999999


Q ss_pred             CCCCHHHHHcCCCC
Q 015532          376 ERLKAREALRHPFF  389 (405)
Q Consensus       376 ~Rpta~elL~hp~f  389 (405)
                      +||++.|+++||||
T Consensus       254 ~Rp~~~~il~~~~~  267 (267)
T cd06628         254 KRPTAAELLKHPFL  267 (267)
T ss_pred             hCcCHHHHhhCCCC
Confidence            99999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-36  Score=282.72  Aligned_cols=249  Identities=35%  Similarity=0.579  Sum_probs=184.6

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---hhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      |++.+.||+|++|.||+|.+..+++.+|+|.++....   ....+..|+++++.+.|+++....                
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            6778999999999999999998999999999864322   345677899999999998763211                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.                        
T Consensus        81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~------------------------  136 (283)
T cd05118          81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGV------------------------  136 (283)
T ss_pred             CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCc------------------------
Confidence                       135788899999999999999999999999999999999976654                        


Q ss_pred             CCCceeccCCCCccccCCc---cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                         ++|+|||.+.......   ....++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...+..+.+..+..
T Consensus       137 ---~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~  213 (283)
T cd05118         137 ---LKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFR  213 (283)
T ss_pred             ---EEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence               4555555543332221   123577889999999876 688999999999999999999999998888887777776


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .++..................     ...+..               ......+.....+..+.+||.+||+.||.+||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~  273 (283)
T cd05118         214 TLGTPDPEVWPKFTSLARNYK-----FSFPKK---------------AGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT  273 (283)
T ss_pred             HcCCCchHhcccchhhhhhhh-----hhhccc---------------cccCHHHhhhhhCHHHHHHHHHHhccCcccCcC
Confidence            666544333222211111000     000000               000001122345778999999999999999999


Q ss_pred             HHHHHcCCCC
Q 015532          380 AREALRHPFF  389 (405)
Q Consensus       380 a~elL~hp~f  389 (405)
                      +.++++||||
T Consensus       274 ~~~ll~~~~~  283 (283)
T cd05118         274 AEQALAHPYF  283 (283)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=8.1e-37  Score=282.24  Aligned_cols=222  Identities=31%  Similarity=0.452  Sum_probs=168.2

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .|++.+.||+|+||.||+|.+..++..||+|+++...      ...+.+.+|+.+++.+.|+++....            
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            5889999999999999999999999999999885321      2234577899999999998873211            


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+                 
T Consensus        83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~-----------------  145 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNV-----------------  145 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCE-----------------
Confidence                             1246778888999999999999999999999999999999766544                 


Q ss_pred             ccCCCCCCCceeccCCCCccccC------CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                                +|+|||++.....      ......++..|+|||.+.+..++.++|||||||++|+|++|+.||......
T Consensus       146 ----------~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~  215 (266)
T cd06651         146 ----------KLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM  215 (266)
T ss_pred             ----------EEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH
Confidence                      5555554432211      111245788999999999888999999999999999999999999765443


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+... +..                                               .......++.+.+|| +||.
T Consensus       216 ~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~~~~li-~~~~  246 (266)
T cd06651         216 AAIFKIATQ-PTN-----------------------------------------------PQLPSHISEHARDFL-GCIF  246 (266)
T ss_pred             HHHHHHhcC-CCC-----------------------------------------------CCCchhcCHHHHHHH-HHhc
Confidence            332221110 000                                               001122355778888 6777


Q ss_pred             cCCCCCCCHHHHHcCCCCC
Q 015532          372 YDPAERLKAREALRHPFFT  390 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~  390 (405)
                      .||++|||++|+++||||+
T Consensus       247 ~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         247 VEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             CChhhCcCHHHHhcCcccc
Confidence            8999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-37  Score=269.97  Aligned_cols=252  Identities=29%  Similarity=0.476  Sum_probs=197.9

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      .+.||.|+||+||.+.|..+|+.||+|.+....   .....+.+|+.+|..+.|.|+...+                   
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            468999999999999999999999999885321   2346677899999998888763211                   


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  -..++.+.++-++.||+.||+|||+.||.||||||.|+|+++                          
T Consensus       138 LmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS--------------------------  191 (449)
T KOG0664|consen  138 LMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS--------------------------  191 (449)
T ss_pred             HHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc--------------------------
Confidence                        245677889999999999999999999999999999999975                          


Q ss_pred             CCCCceeccCCCCccccCCcc----ceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                       +..+||||||+++..+.+..    ..+-|.+|+|||++.|. .|+.++||||.|||+.||+..+..|...+..+++..|
T Consensus       192 -NCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lI  270 (449)
T KOG0664|consen  192 -NCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMI  270 (449)
T ss_pred             -CceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHH
Confidence             45678888888876654432    24678899999999987 4999999999999999999999999999999999999


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhh-hhhcccCchHHHHHHHHHccccCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      ..++|++..+-....++..+....+++... |+                .+.+ .........-+..+++.+||.+||++
T Consensus       271 tdLLGTPs~EaMr~ACEGAk~H~LR~~~k~-Ps----------------~~vLYtlsS~~~~~heav~~~~~~l~~d~dk  333 (449)
T KOG0664|consen  271 IDLLGTPSQEAMKYACEGAKNHVLRAGLRA-PD----------------TQRLYKIASPDDKNHEAVDLLQKLLHFDPDK  333 (449)
T ss_pred             HHHhCCCcHHHHHHHhhhhHHHhhccCCCC-CC----------------ccceeeecCCcccchHHHHHHHHHhCCCCcc
Confidence            999999987776666666655544432110 00                0000 00111122346778999999999999


Q ss_pred             CCCHHHHHcCCCCCCC
Q 015532          377 RLKAREALRHPFFTRD  392 (405)
Q Consensus       377 Rpta~elL~hp~f~~~  392 (405)
                      |.+.++++.|++..+.
T Consensus       334 ris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  334 RISVEEALQHRYLEEG  349 (449)
T ss_pred             cccHhhhccccccccc
Confidence            9999999999998764

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4.3e-37  Score=288.14  Aligned_cols=232  Identities=24%  Similarity=0.389  Sum_probs=178.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      +.|.....||+|+||.||++.+..+++.||||.+.... ...+.+.+|+.+++.+.|+++....                
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence            44666788999999999999999899999999986432 3445678899999999998862210                


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                        
T Consensus       102 ~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~------------------------  157 (292)
T cd06658         102 EGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI------------------------  157 (292)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCE------------------------
Confidence                      1346888999999999999999999999999999999999776654                        


Q ss_pred             CCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          225 SAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                         +|+|||++.....   ......|+..|+|||++.+..++.++|||||||++|+|++|..||...+....+..+....
T Consensus       158 ---kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~  234 (292)
T cd06658         158 ---KLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL  234 (292)
T ss_pred             ---EEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC
Confidence               5555554432211   1123468899999999988889999999999999999999999998766554443332211


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                      ....                                               ......+..+.+||.+||..||++|||++
T Consensus       235 ~~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  267 (292)
T cd06658         235 PPRV-----------------------------------------------KDSHKVSSVLRGFLDLMLVREPSQRATAQ  267 (292)
T ss_pred             CCcc-----------------------------------------------ccccccCHHHHHHHHHHccCChhHCcCHH
Confidence            1000                                               00112456789999999999999999999


Q ss_pred             HHHcCCCCCCCCCCCc
Q 015532          382 EALRHPFFTRDVRRPT  397 (405)
Q Consensus       382 elL~hp~f~~~~~~~~  397 (405)
                      |+++||||........
T Consensus       268 ~il~~~~~~~~~~~~~  283 (292)
T cd06658         268 ELLQHPFLKLAGPPSC  283 (292)
T ss_pred             HHhhChhhhccCCccc
Confidence            9999999997654443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-36  Score=282.23  Aligned_cols=248  Identities=33%  Similarity=0.538  Sum_probs=183.4

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      |++.+.||.|++|.||+|.+..+|+.||||++....   ...+.+.+|+++++.++|+++....                
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            678899999999999999999999999999986432   2235677899999999999874211                


Q ss_pred             ----------c--ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ----------Y--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ----------~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                .  ..+++..+..++.||+.||.|||+++++||||+|+||+++.++.                       
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~-----------------------  137 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGA-----------------------  137 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCc-----------------------
Confidence                      1  24788999999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          ++|+|||.+......   .....++..|+|||++.+. .++.++|||||||++|+|++|.+||...+....+..+.
T Consensus       138 ----~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  213 (283)
T cd07835         138 ----LKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIF  213 (283)
T ss_pred             ----EEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                455555554332211   1123568889999988764 47899999999999999999999999888877777777


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +..+.+....+...... ..+...     .+.              .. ..........++..+.++|.+||+.||++||
T Consensus       214 ~~~~~~~~~~~~~~~~~-~~~~~~-----~~~--------------~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  272 (283)
T cd07835         214 RTLGTPDEDVWPGVTSL-PDYKPT-----FPK--------------WA-RQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI  272 (283)
T ss_pred             HHhCCCChHHhhhhhhc-hhhhhh-----ccc--------------cc-ccchhhhcCCCCHHHHHHHHHHhcCChhhCc
Confidence            76666554432221110 000000     000              00 0001112344567899999999999999999


Q ss_pred             CHHHHHcCCCC
Q 015532          379 KAREALRHPFF  389 (405)
Q Consensus       379 ta~elL~hp~f  389 (405)
                      |++|+++||||
T Consensus       273 t~~~il~~~~~  283 (283)
T cd07835         273 SAKAALQHPYF  283 (283)
T ss_pred             CHHHHhcCCCC
Confidence            99999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-37  Score=286.38  Aligned_cols=229  Identities=30%  Similarity=0.488  Sum_probs=177.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ++|++++.||.|+||.||+|.+..+++.||+|+++... ...+.+..|+++++++.|+++....                
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            56999999999999999999998899999999986433 3345678899999999998873211                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.                       
T Consensus        85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~-----------------------  141 (280)
T cd06611          85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGD-----------------------  141 (280)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCC-----------------------
Confidence                        135788999999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccC---CccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                          ++|+|||.+.....   ......|+..|+|||++..     ..++.++|||||||++|+|++|..||...+....+
T Consensus       142 ----~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~  217 (280)
T cd06611         142 ----VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL  217 (280)
T ss_pred             ----EEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH
Confidence                55566665433221   1223568999999999853     34778999999999999999999999876554433


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+...  ..|                                             .......++..+.+||.+||+.||
T Consensus       218 ~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p  250 (280)
T cd06611         218 LKILKS--EPP---------------------------------------------TLDQPSKWSSSFNDFLKSCLVKDP  250 (280)
T ss_pred             HHHhcC--CCC---------------------------------------------CcCCcccCCHHHHHHHHHHhccCh
Confidence            322211  000                                             001112346688999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~  394 (405)
                      ++|||++++++||||.....
T Consensus       251 ~~Rps~~~il~~~~~~~~~~  270 (280)
T cd06611         251 DDRPTAAELLKHPFVSDQSD  270 (280)
T ss_pred             hhCcCHHHHhcChhhcccch
Confidence            99999999999999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.2e-36  Score=281.10  Aligned_cols=227  Identities=27%  Similarity=0.488  Sum_probs=173.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-------hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      +|+..+.||+|+||.||+|.+..+++.||+|+++...       ...+.+..|+.+++.+.|+++....           
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4788899999999999999999999999999986422       2346678899999999998873221           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.                   
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~-------------------  141 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-------------------  141 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-------------------
Confidence                            235678899999999999999999999999999999999975431                   


Q ss_pred             cCCCCCCCceeccCCCCccccCC-------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                             .++|+|||.+......       .....|+..|+|||.+.+..++.++|+||+||++|+|++|..||......
T Consensus       142 -------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~  214 (268)
T cd06630         142 -------RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS  214 (268)
T ss_pred             -------EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc
Confidence                   3566666665433221       12246788999999998888999999999999999999999999754432


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+.+....                   .                          .........++++.+++.+||+
T Consensus       215 ~~~~~~~~~~~~-------------------~--------------------------~~~~~~~~~~~~~~~~i~~~l~  249 (268)
T cd06630         215 NHLALIFKIASA-------------------T--------------------------TAPSIPEHLSPGLRDVTLRCLE  249 (268)
T ss_pred             chHHHHHHHhcc-------------------C--------------------------CCCCCchhhCHHHHHHHHHHcC
Confidence            222221111000                   0                          0001112346789999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCC
Q 015532          372 YDPAERLKAREALRHPFFT  390 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~  390 (405)
                      .||++|||+.++++||||+
T Consensus       250 ~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         250 LQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             CCcccCcCHHHHhcCcccC
Confidence            9999999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-37  Score=298.60  Aligned_cols=221  Identities=30%  Similarity=0.442  Sum_probs=173.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc-CCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~-~~~~~~--------------  154 (405)
                      +.+.|++...+|.|+|+.|-.|.+..+++.+++|++.+..   ....+|+.++....++ +++...              
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            4577999999999999999999999999999999997642   2234577666665544 442211              


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe-cccccccCCccccccCCCCCCcccCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~-~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                  .......++..+++||+.|+.|||++|||||||||+|||++ +.                        
T Consensus       397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~------------------------  452 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSA------------------------  452 (612)
T ss_pred             hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCC------------------------
Confidence                        11122256778999999999999999999999999999994 43                        


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                         .+++|+|||.+........+.+-|..|.|||++....|+.++||||||++||+||+|+.||........+   ...+
T Consensus       453 ---g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei---~~~i  526 (612)
T KOG0603|consen  453 ---GHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEI---HTRI  526 (612)
T ss_pred             ---CcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHH---HHhh
Confidence               3578888888877766655557788999999999999999999999999999999999999876554111   1111


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                      +..+.                                                ...+|+.++|||.+||++||.+|+++.
T Consensus       527 ~~~~~------------------------------------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~  558 (612)
T KOG0603|consen  527 QMPKF------------------------------------------------SECVSDEAKDLLQQLLQVDPALRLGAD  558 (612)
T ss_pred             cCCcc------------------------------------------------ccccCHHHHHHHHHhccCChhhCcChh
Confidence            11110                                                135688999999999999999999999


Q ss_pred             HHHcCCCCCC
Q 015532          382 EALRHPFFTR  391 (405)
Q Consensus       382 elL~hp~f~~  391 (405)
                      +++.||||.+
T Consensus       559 ~i~~h~w~~~  568 (612)
T KOG0603|consen  559 EIGAHPWFLS  568 (612)
T ss_pred             hhccCcchhc
Confidence            9999999933

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=4e-37  Score=287.53  Aligned_cols=230  Identities=26%  Similarity=0.413  Sum_probs=172.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHh-hcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~-~~~~~~~~---------------  154 (405)
                      .|+..+.||+|+||.||++.+..+++.||||.+....  .....+..|+.++.++. |+++....               
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            4677789999999999999999999999999986432  33456788999999997 77763211               


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                      ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.                  
T Consensus        85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~------------------  146 (288)
T cd06616          85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGN------------------  146 (288)
T ss_pred             ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCc------------------
Confidence                            1346788899999999999999997 49999999999999976554                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                               ++|+|||++......  .....|+..|+|||++.+.   .++.++|||||||++|+|++|..||.....  
T Consensus       147 ---------~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--  215 (288)
T cd06616         147 ---------IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--  215 (288)
T ss_pred             ---------EEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--
Confidence                     566666655432221  1223678899999999876   688999999999999999999999976542  


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.+.....+.                                          .........++.++.+||.+||+.
T Consensus       216 ~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~l~~li~~~l~~  253 (288)
T cd06616         216 VFDQLTQVVKGDPP------------------------------------------ILSNSEEREFSPSFVNFINLCLIK  253 (288)
T ss_pred             HHHHHhhhcCCCCC------------------------------------------cCCCcCCCccCHHHHHHHHHHccC
Confidence            22222221111000                                          000011123567899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ||++|||++++++||||+...
T Consensus       254 ~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         254 DESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             ChhhCcCHHHHhcChhhhchh
Confidence            999999999999999998753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-37  Score=293.81  Aligned_cols=239  Identities=23%  Similarity=0.314  Sum_probs=178.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc---hhhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ..+...+...||+|.||+||+|++.  | .||||+++-   .....+.|.+|+.++++-+|.||.-.+            
T Consensus       390 p~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiT  466 (678)
T KOG0193|consen  390 PPEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIIT  466 (678)
T ss_pred             CHHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeee
Confidence            3345678899999999999999986  3 499999964   234567899999999999999983221            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...|.......|++||++|+.|||.++|||||||..||++.+++.+                   
T Consensus       467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kV-------------------  527 (678)
T KOG0193|consen  467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKV-------------------  527 (678)
T ss_pred             hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcE-------------------
Confidence                           2346677888999999999999999999999999999999876655                   


Q ss_pred             CCCCCCCceeccCCCCcccc-----CCccceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          220 NLPKSSAIKLIDFGSTTFEH-----QDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                              ||.|||++....     .......|...|||||++..   .+|++.+|||||||++|||++|..||......
T Consensus       528 --------kIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d  599 (678)
T KOG0193|consen  528 --------KIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD  599 (678)
T ss_pred             --------EEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh
Confidence                    555555443211     11122467888999999974   46999999999999999999999999955555


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +++.++-+..+.+ .                                            ......+...++++|+..||.
T Consensus       600 qIifmVGrG~l~p-d--------------------------------------------~s~~~s~~pk~mk~Ll~~C~~  634 (678)
T KOG0193|consen  600 QIIFMVGRGYLMP-D--------------------------------------------LSKIRSNCPKAMKRLLSDCWK  634 (678)
T ss_pred             heEEEecccccCc-c--------------------------------------------chhhhccCHHHHHHHHHHHHh
Confidence            5554443321110 0                                            001113456689999999999


Q ss_pred             cCCCCCCCHHHHHc--------CCCCCCCCCCCcchhccC
Q 015532          372 YDPAERLKAREALR--------HPFFTRDVRRPTLLVATG  403 (405)
Q Consensus       372 ~dP~~Rpta~elL~--------hp~f~~~~~~~~~~~~~~  403 (405)
                      +++++||+..+||.        -|=+..-.+.|.++.++.
T Consensus       635 ~~~~eRP~F~~il~~l~~l~~~~pki~RS~S~P~~~~~~~  674 (678)
T KOG0193|consen  635 FDREERPLFPQLLSKLEELLPSLPKINRSASEPVLLRSSA  674 (678)
T ss_pred             cCcccCccHHHHHHHHHHhhhcccccccCcCccchhhhhh
Confidence            99999999999887        355566666676665544

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.4e-36  Score=282.97  Aligned_cols=230  Identities=21%  Similarity=0.443  Sum_probs=170.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHH-HHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDV-LQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~i-l~~l~~~~~~~~~--------------  154 (405)
                      +.|++.+.||+|+||.||+|++..+++.||||+++...  ........|+.+ ++.+.|+++....              
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            36999999999999999999999999999999986532  223445556665 5556677763210              


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                      ...+++..++.++.||+.||.|||++ +++||||||+||+++.++.                  
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~------------------  142 (283)
T cd06617          81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQ------------------  142 (283)
T ss_pred             hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC------------------
Confidence                            12478899999999999999999997 9999999999999976654                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCC-h
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG----LGWNYPCDLWSVGCILVELCSGEALFQTHE-N  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~~lltg~~pf~~~~-~  290 (405)
                               +||+|||.+......  .....|+..|+|||++.+    ..++.++|+|||||++|+|++|..||.... .
T Consensus       143 ---------~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  213 (283)
T cd06617         143 ---------VKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP  213 (283)
T ss_pred             ---------EEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC
Confidence                     556666655433221  122467889999999865    356889999999999999999999996432 2


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+.+..+..  +..+                     ..                         ....++.++.+||.+||
T Consensus       214 ~~~~~~~~~--~~~~---------------------~~-------------------------~~~~~~~~l~~li~~~l  245 (283)
T cd06617         214 FQQLKQVVE--EPSP---------------------QL-------------------------PAEKFSPEFQDFVNKCL  245 (283)
T ss_pred             HHHHHHHHh--cCCC---------------------CC-------------------------CccccCHHHHHHHHHHc
Confidence            222221111  0000                     00                         00124678999999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ..||++|||++++++||||.....+.
T Consensus       246 ~~~p~~Rp~~~~il~~~~~~~~~~~~  271 (283)
T cd06617         246 KKNYKERPNYPELLQHPFFELHLSKN  271 (283)
T ss_pred             cCChhhCcCHHHHhcCchhhhccccc
Confidence            99999999999999999999976553

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-36  Score=281.70  Aligned_cols=225  Identities=27%  Similarity=0.446  Sum_probs=173.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~---------------  154 (405)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+..|+.+++++ .|+++....               
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            5789999999999999999999998999999999976655567788999999999 577652110               


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++.             
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~-------------  151 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAE-------------  151 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCe-------------
Confidence                                  135678888999999999999999999999999999999976654             


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-----CCCCchhHHHHHHHHHHHHhCCCC
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEAL  284 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~~lltg~~p  284 (405)
                                    ++|+|||.+......   .....|+..|+|||++...     .++.++|||||||++|+|++|..|
T Consensus       152 --------------~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p  217 (275)
T cd06608         152 --------------VKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP  217 (275)
T ss_pred             --------------EEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCC
Confidence                          555555555432211   1224688999999998642     467899999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       285 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      |........+..+...  ..+                                             .......++..+.+
T Consensus       218 ~~~~~~~~~~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~~  250 (275)
T cd06608         218 LCDMHPMRALFKIPRN--PPP---------------------------------------------TLKSPENWSKKFND  250 (275)
T ss_pred             ccccchHHHHHHhhcc--CCC---------------------------------------------CCCchhhcCHHHHH
Confidence            9765544433332211  000                                             00011124568899


Q ss_pred             HHHHccccCCCCCCCHHHHHcCCCC
Q 015532          365 LLQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      ||.+||..||++|||++|+++|||+
T Consensus       251 li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         251 FISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHhhcChhhCcCHHHHhcCCCC
Confidence            9999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=3.9e-37  Score=284.35  Aligned_cols=225  Identities=24%  Similarity=0.381  Sum_probs=170.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||+|+++... .....+.+|+.+++.+.|+++....                
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            57999999999999999999999999999999986543 2234567899999999999873221                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++.+++.++.|++.||.|||++||+|+||||+||+++.++.+                       
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~-----------------------  145 (267)
T cd06645          89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHV-----------------------  145 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE-----------------------
Confidence                       2357889999999999999999999999999999999999776654                       


Q ss_pred             CCCceeccCCCCccccC---CccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                          +|+|||++.....   ......|+..|+|||++.   ...++.++|+|||||++|+|++|..||...........+
T Consensus       146 ----~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~  221 (267)
T cd06645         146 ----KLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM  221 (267)
T ss_pred             ----EECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence                5555554432211   112346899999999985   445889999999999999999999999665433322211


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .......+                                             .......++..+.+||.+||+.||++|
T Consensus       222 ~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~P~~R  256 (267)
T cd06645         222 TKSNFQPP---------------------------------------------KLKDKMKWSNSFHHFVKMALTKNPKKR  256 (267)
T ss_pred             hccCCCCC---------------------------------------------cccccCCCCHHHHHHHHHHccCCchhC
Confidence            11000000                                             000011245678999999999999999


Q ss_pred             CCHHHHHcCCC
Q 015532          378 LKAREALRHPF  388 (405)
Q Consensus       378 pta~elL~hp~  388 (405)
                      ||++++++|||
T Consensus       257 ~~~~~ll~~~~  267 (267)
T cd06645         257 PTAEKLLQHPF  267 (267)
T ss_pred             cCHHHHhcCCC
Confidence            99999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.7e-36  Score=285.19  Aligned_cols=256  Identities=31%  Similarity=0.514  Sum_probs=186.8

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      |+...++|++.+.||+|+||.||+|.+..+++.||||+++...   .....+..|+++++.+.|+++....         
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~   81 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA   81 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence            4556678999999999999999999999999999999996432   2334567899999999998774310         


Q ss_pred             ----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcc
Q 015532          155 ----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       155 ----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                                                  ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.       
T Consensus        82 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~-------  154 (302)
T cd07864          82 LDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ-------  154 (302)
T ss_pred             hhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCc-------
Confidence                                        124688899999999999999999999999999999999976664       


Q ss_pred             ccccCCCCCCcccCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhC
Q 015532          207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg  281 (405)
                                          ++|+|||.+.......    ....++..|+|||.+.+. .++.++|||||||++|+|++|
T Consensus       155 --------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g  214 (302)
T cd07864         155 --------------------IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK  214 (302)
T ss_pred             --------------------EEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence                                4555555554322211    113467789999998754 478999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ++||...+..+.+..+.+..+..+.......... .         .+.....          ...............+..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~----------~~~~~~~~~~~~~~~~~~  274 (302)
T cd07864         215 KPIFQANQELAQLELISRLCGSPCPAVWPDVIKL-P---------YFNTMKP----------KKQYRRRLREEFSFIPTP  274 (302)
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCChhhccccccc-c---------ccccccc----------ccccccchhhhcCCCCHH
Confidence            9999988888888777777665543221110000 0         0000000          000000011112234678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      +.+||.+||+.||++|||+.++++||||
T Consensus       275 ~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         275 ALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            9999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=5e-37  Score=272.59  Aligned_cols=264  Identities=28%  Similarity=0.464  Sum_probs=205.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCcc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRY------------  155 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~~------------  155 (405)
                      ..||.-++.+|.|.- .|..|-|.-.++.||+|.+...   ........+|..++..+.|.|+++...            
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            468999999999998 8888999889999999987432   222355778999999999999865331            


Q ss_pred             ------------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          156 ------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       156 ------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                        -.+.-+.+..++.|++.|++|||+.||+||||||+||++..++                   
T Consensus        95 e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~-------------------  155 (369)
T KOG0665|consen   95 EVYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC-------------------  155 (369)
T ss_pred             hHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-------------------
Confidence                              1233457788999999999999999999999999999987654                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              .+||.|||+|+.....  .+..+.|..|.|||++.+..|...+||||+||++.||++|...|.|.+..++..
T Consensus       156 --------~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~  227 (369)
T KOG0665|consen  156 --------TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWN  227 (369)
T ss_pred             --------heeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHH
Confidence                    5677777777654443  234688999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      ++.+.+|.+-+.+..........|+........   ..    .........++. ..+.....+..++||+.+||..||+
T Consensus       228 ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~---~~----f~~~fpD~~f~~-~~e~~~~~~~~ardll~~MLvi~pe  299 (369)
T KOG0665|consen  228 KIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQA---IS----FSELFPDSLFPV-VLEGSKLDCSLARDLLSKMLVIDPE  299 (369)
T ss_pred             HHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhc---cc----hhhhCCcccccc-cccCCccchHHHHHHHHHhhccChh
Confidence            999999999999998888888887763211110   00    000000000111 1112223456789999999999999


Q ss_pred             CCCCHHHHHcCCCCC
Q 015532          376 ERLKAREALRHPFFT  390 (405)
Q Consensus       376 ~Rpta~elL~hp~f~  390 (405)
                      +|.+++++|+||||+
T Consensus       300 ~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  300 KRISVDDALRHPYIK  314 (369)
T ss_pred             hcccHHHHhcCCeee
Confidence            999999999999997

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.1e-36  Score=280.02  Aligned_cols=221  Identities=24%  Similarity=0.412  Sum_probs=172.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....    ...+.+.+|+++++++.|+++....              
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            5899999999999999999999899999999996432    3346678899999999999873210              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.                      
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~----------------------  138 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGH----------------------  138 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCC----------------------
Confidence                         125788899999999999999999999999999999999987664                      


Q ss_pred             CCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL--EHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~--~~~~~i  297 (405)
                           ++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+..  ..+...
T Consensus       139 -----~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  213 (258)
T cd05578         139 -----VHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK  213 (258)
T ss_pred             -----EEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence                 455555554433221  12245788999999999888999999999999999999999999876542  111111


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ..  ..                                               ....+...+..+.++|.+||+.||++|
T Consensus       214 ~~--~~-----------------------------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R  244 (258)
T cd05578         214 QE--TA-----------------------------------------------DVLYPATWSTEAIDAINKLLERDPQKR  244 (258)
T ss_pred             hc--cc-----------------------------------------------cccCcccCcHHHHHHHHHHccCChhHc
Confidence            00  00                                               001112345688999999999999999


Q ss_pred             CCH--HHHHcCCCC
Q 015532          378 LKA--REALRHPFF  389 (405)
Q Consensus       378 pta--~elL~hp~f  389 (405)
                      +++  +|+++||||
T Consensus       245 ~~~~~~~l~~~~~~  258 (258)
T cd05578         245 LGDNLKDLKNHPYF  258 (258)
T ss_pred             CCccHHHHhcCCCC
Confidence            999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-37  Score=293.57  Aligned_cols=214  Identities=24%  Similarity=0.359  Sum_probs=175.3

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +.+++.||+|.||.||+|.++.+. .||+|.++......+.+.+|+++|++|+|++++...                   
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCCC-cccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            456789999999999999997443 599999988777778899999999999999984321                   


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+...+...++.||++|++||+++++|||||-..|||++.+.                          
T Consensus       287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--------------------------  340 (468)
T KOG0197|consen  287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--------------------------  340 (468)
T ss_pred             cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--------------------------
Confidence                      24567788899999999999999999999999999999998765                          


Q ss_pred             CCceeccCCCCccccCCccc----eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 015532          225 SAIKLIDFGSTTFEHQDHSY----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER  299 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~  299 (405)
                       .+||+|||+|+...++...    ..-...|.|||.+....++.|+|||||||+||||+| |+.||.+.++.+.+.++.+
T Consensus       341 -~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~  419 (468)
T KOG0197|consen  341 -VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLER  419 (468)
T ss_pred             -eEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhc
Confidence             4566666666643332221    122557999999999999999999999999999999 9999999999988877755


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      -                       -+++-|                          +.+++++.+++..||..+|++|||
T Consensus       420 G-----------------------yRlp~P--------------------------~~CP~~vY~lM~~CW~~~P~~RPt  450 (468)
T KOG0197|consen  420 G-----------------------YRLPRP--------------------------EGCPDEVYELMKSCWHEDPEDRPT  450 (468)
T ss_pred             c-----------------------CcCCCC--------------------------CCCCHHHHHHHHHHhhCCcccCCC
Confidence            2                       233322                          456789999999999999999999


Q ss_pred             HHHHH
Q 015532          380 AREAL  384 (405)
Q Consensus       380 a~elL  384 (405)
                      .+.+.
T Consensus       451 F~~L~  455 (468)
T KOG0197|consen  451 FETLR  455 (468)
T ss_pred             HHHHH
Confidence            98765

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.8e-36  Score=276.80  Aligned_cols=221  Identities=27%  Similarity=0.450  Sum_probs=174.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||+|+||.||++++..+++.||+|.+...   ......+.+|+.+++++.|+++....               
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            599999999999999999999999999999998642   23345678899999999998863211               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.                     
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~---------------------  139 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT---------------------  139 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC---------------------
Confidence                          124678888999999999999999999999999999999976554                     


Q ss_pred             CCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            ++|+|||.+.......   ....|+..|+|||++.+..++.++|+|||||++|+|++|..||...+..+....+
T Consensus       140 ------~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~  213 (256)
T cd08218         140 ------IKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI  213 (256)
T ss_pred             ------EEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH
Confidence                  5666666554332211   1245788999999999888999999999999999999999999876655444332


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ..  +..+                                               ......+.++.++|.+||+.+|++|
T Consensus       214 ~~--~~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R  244 (256)
T cd08218         214 IR--GSYP-----------------------------------------------PVSSHYSYDLRNLVSQLFKRNPRDR  244 (256)
T ss_pred             hc--CCCC-----------------------------------------------CCcccCCHHHHHHHHHHhhCChhhC
Confidence            21  1100                                               0112346688999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      |++.++++||||
T Consensus       245 p~~~~vl~~~~~  256 (256)
T cd08218         245 PSVNSILEKNFI  256 (256)
T ss_pred             cCHHHHhhCcCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=2.3e-36  Score=278.93  Aligned_cols=231  Identities=26%  Similarity=0.418  Sum_probs=171.8

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-------hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      +|++.+.||+|+||.||+|.+ .+++.+|||.++...       .....+.+|+++++.+.|+++....           
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            478889999999999999987 478889999886321       1234577899999999998763211           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++++|||++.......   
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---  156 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG---  156 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc---
Confidence                            1346888999999999999999999999999999999999877766666665433211000   


Q ss_pred             cCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                                     .............|+..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+.
T Consensus       157 ---------------~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  221 (265)
T cd06631         157 ---------------LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG  221 (265)
T ss_pred             ---------------ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh
Confidence                           00000011122468899999999998889999999999999999999999997655443332222


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ...+..|                                               .....++..+.+||.+||..||++||
T Consensus       222 ~~~~~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp  254 (265)
T cd06631         222 AHRGLMP-----------------------------------------------RLPDSFSAAAIDFVTSCLTRDQHERP  254 (265)
T ss_pred             hccCCCC-----------------------------------------------CCCCCCCHHHHHHHHHHhcCCcccCC
Confidence            1111110                                               11123467889999999999999999


Q ss_pred             CHHHHHcCCCC
Q 015532          379 KAREALRHPFF  389 (405)
Q Consensus       379 ta~elL~hp~f  389 (405)
                      |+.|+++||||
T Consensus       255 ~~~~~l~~~~~  265 (265)
T cd06631         255 SALQLLRHDFL  265 (265)
T ss_pred             CHHHHhcCCCC
Confidence            99999999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.3e-36  Score=276.03  Aligned_cols=222  Identities=27%  Similarity=0.389  Sum_probs=175.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||+|+||.||+|.+..+++.||||.+...   ......+..|+++++.+.|+++....               
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            599999999999999999999999999999998643   22345678899999999998863211               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.|++.||.|||++||+|+||||+||+++.++                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~----------------------  138 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK----------------------  138 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC----------------------
Confidence                          12368889999999999999999999999999999999996432                      


Q ss_pred             CCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          ..++|+|||.+.......  ....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+.......+.
T Consensus       139 ----~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~  214 (256)
T cd08220         139 ----MVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIM  214 (256)
T ss_pred             ----CEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHH
Confidence                235777777765443222  22468889999999998888999999999999999999999998765544332221


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ....                                                 .......+..+.+++.+||..||++||
T Consensus       215 ~~~~-------------------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp  245 (256)
T cd08220         215 SGTF-------------------------------------------------APISDRYSPDLRQLILSMLNLDPSKRP  245 (256)
T ss_pred             hcCC-------------------------------------------------CCCCCCcCHHHHHHHHHHccCChhhCC
Confidence            1000                                                 001123466899999999999999999


Q ss_pred             CHHHHHcCCCC
Q 015532          379 KAREALRHPFF  389 (405)
Q Consensus       379 ta~elL~hp~f  389 (405)
                      |+.|+++||||
T Consensus       246 t~~~ll~~p~~  256 (256)
T cd08220         246 QLSQIMAQPIC  256 (256)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1.8e-36  Score=289.74  Aligned_cols=267  Identities=31%  Similarity=0.458  Sum_probs=191.9

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHH-hhcCCCCCc----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l-~~~~~~~~~----------  154 (405)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||.+...   ......+.+|+.++.++ .|+++....          
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence            4668899999999999999999999989999999988432   22334566899999999 898873321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+||+++.++.++++|||++........ 
T Consensus        84 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~-  162 (337)
T cd07852          84 IYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE-  162 (337)
T ss_pred             EEEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc-
Confidence                             01467788888999999999999999999999999999998777665555554322211000 


Q ss_pred             ccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                                        ...........||..|+|||++.+ ..++.++|||||||++|+|++|+.||.+....+....
T Consensus       163 ------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~  224 (337)
T cd07852         163 ------------------NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK  224 (337)
T ss_pred             ------------------cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                              000011122468999999998865 4578999999999999999999999998888888888


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....+..+..............+...  .                ...... .........+.++.+||.+||+.||++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~P~~  285 (337)
T cd07852         225 IIEVIGPPSAEDIESIKSPFAATMLDS--L----------------PSRPRK-PLDELLPKASDDALDLLKKLLVFNPNK  285 (337)
T ss_pred             HHHHhCCCCHHHHHHHHhhhHHHhhhh--c----------------cccccc-chhhhccCCCHHHHHHHHHhccCCccc
Confidence            877777666544333221111100000  0                000000 011122335778999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDV  393 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~  393 (405)
                      |||+.++++||||++-.
T Consensus       286 Rps~~~il~~~~~~~~~  302 (337)
T cd07852         286 RLTAEEALEHPYVAQFH  302 (337)
T ss_pred             ccCHHHHhhChhhhhhc
Confidence            99999999999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=9.9e-37  Score=281.65  Aligned_cols=226  Identities=24%  Similarity=0.361  Sum_probs=169.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+.|+++....               
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            356999999999999999999999999999999986432 2334567899999999999874321               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.|++.||.|||++||+||||||+||+++.++.                       
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~-----------------------  144 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGD-----------------------  144 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC-----------------------
Confidence                        134678889999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                          ++|+|||++......   .....|+..|+|||.+.   ...++.++|+|||||++|+|++|..||......+....
T Consensus       145 ----~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~  220 (267)
T cd06646         145 ----VKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL  220 (267)
T ss_pred             ----EEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee
Confidence                455555555432211   12346888999999985   33578899999999999999999999965443222111


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....                        ...+                     .......++..+.+||.+||+.||++
T Consensus       221 ~~~~~------------------------~~~~---------------------~~~~~~~~~~~~~~li~~~l~~~P~~  255 (267)
T cd06646         221 MSKSN------------------------FQPP---------------------KLKDKTKWSSTFHNFVKISLTKNPKK  255 (267)
T ss_pred             eecCC------------------------CCCC---------------------CCccccccCHHHHHHHHHHhhCChhh
Confidence            11000                        0000                     00001234668999999999999999


Q ss_pred             CCCHHHHHcCCC
Q 015532          377 RLKAREALRHPF  388 (405)
Q Consensus       377 Rpta~elL~hp~  388 (405)
                      |||++++|+|+|
T Consensus       256 Rp~~~~il~~l~  267 (267)
T cd06646         256 RPTAERLLTHLF  267 (267)
T ss_pred             CcCHHHHhcCCC
Confidence            999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=4.5e-36  Score=277.03  Aligned_cols=229  Identities=28%  Similarity=0.427  Sum_probs=169.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|++.+.||+|+||.||+|.+..+++.||||.+....      ...+.+.+|+.+++.+.|+++....           
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            35899999999999999999999999999999885321      2235677899999999998863211           


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.++++|||++....... 
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~-  160 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC-  160 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccc-
Confidence                              1235777888999999999999999999999999999999877655555555432110000 


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                                          ..........|+..|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       161 --------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~  220 (265)
T cd06652         161 --------------------LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK  220 (265)
T ss_pred             --------------------ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH
Confidence                                000111224588899999999988899999999999999999999999976544333222


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +..   ...                                             ....+...+..+.++|.+|+. +|++
T Consensus       221 ~~~---~~~---------------------------------------------~~~~~~~~~~~~~~~i~~~l~-~p~~  251 (265)
T cd06652         221 IAT---QPT---------------------------------------------NPVLPPHVSDHCRDFLKRIFV-EAKL  251 (265)
T ss_pred             Hhc---CCC---------------------------------------------CCCCchhhCHHHHHHHHHHhc-Chhh
Confidence            111   000                                             000112335678899999995 9999


Q ss_pred             CCCHHHHHcCCCCC
Q 015532          377 RLKAREALRHPFFT  390 (405)
Q Consensus       377 Rpta~elL~hp~f~  390 (405)
                      |||++|+++|||+.
T Consensus       252 Rp~~~~il~~~~~~  265 (265)
T cd06652         252 RPSADELLRHTFVH  265 (265)
T ss_pred             CCCHHHHhcCcccC
Confidence            99999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.3e-36  Score=285.53  Aligned_cols=228  Identities=24%  Similarity=0.407  Sum_probs=176.2

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      |.....||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.++..+.|+++....                  
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            455668999999999999999899999999986432 3345677899999999998863211                  


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..++.++.||+.||.|||++||+||||||+||+++.++.                           
T Consensus       103 ~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~---------------------------  155 (297)
T cd06659         103 GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR---------------------------  155 (297)
T ss_pred             CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCc---------------------------
Confidence                    134678899999999999999999999999999999999977664                           


Q ss_pred             ceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 015532          227 IKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP  303 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~  303 (405)
                      ++|+|||++.....   ......|+..|+|||++.+..++.++|||||||++|+|++|..||......+.+..+...   
T Consensus       156 ~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---  232 (297)
T cd06659         156 VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---  232 (297)
T ss_pred             EEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---
Confidence            45555555432221   112356899999999999888999999999999999999999999876655544332210   


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHH
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA  383 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el  383 (405)
                      .+.                                            ........+..+.++|.+||+.||++|||++++
T Consensus       233 ~~~--------------------------------------------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~l  268 (297)
T cd06659         233 PPP--------------------------------------------KLKNAHKISPVLRDFLERMLTREPQERATAQEL  268 (297)
T ss_pred             CCC--------------------------------------------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence            000                                            001112345678999999999999999999999


Q ss_pred             HcCCCCCCCCCC
Q 015532          384 LRHPFFTRDVRR  395 (405)
Q Consensus       384 L~hp~f~~~~~~  395 (405)
                      ++||||.+..-.
T Consensus       269 l~~~~~~~~~~~  280 (297)
T cd06659         269 LDHPFLLQTGLP  280 (297)
T ss_pred             hhChhhccCCCc
Confidence            999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=4.9e-36  Score=275.95  Aligned_cols=221  Identities=24%  Similarity=0.435  Sum_probs=173.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||.|+||.||+|.+..+++.||+|++...   ....+.+..|+++++.+.|+++....               
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            489999999999999999999999999999998642   23445677899999999999874311               


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHH-----HCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMH-----ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH-----~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                        ...+++..++.++.||+.||.|||     +.+|+|+||||+||+++.++.            
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~------------  148 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNN------------  148 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCC------------
Confidence                              134677889999999999999999     899999999999999987665            


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                                     ++|+|||++.......   ....|+..|+|||++.+..++.++|+||||+++|+|++|..||...
T Consensus       149 ---------------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  213 (265)
T cd08217         149 ---------------VKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTAR  213 (265)
T ss_pred             ---------------EEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCc
Confidence                           4555555544332221   2246889999999999888999999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      +.......+....  .                                               .......+..+.+++.+
T Consensus       214 ~~~~~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~l~~~  244 (265)
T cd08217         214 NQLQLASKIKEGK--F-----------------------------------------------RRIPYRYSSELNEVIKS  244 (265)
T ss_pred             CHHHHHHHHhcCC--C-----------------------------------------------CCCccccCHHHHHHHHH
Confidence            6433332221100  0                                               00112345688999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f  389 (405)
                      ||+.+|++|||+.++++|||+
T Consensus       245 ~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         245 MLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HccCCcccCCCHHHHhhCCCC
Confidence            999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.9e-36  Score=278.06  Aligned_cols=234  Identities=22%  Similarity=0.351  Sum_probs=173.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.+.||.|+||+||+|....++..||+|++....  .....+.+|+++++.+.|+++....               
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            36999999999999999999998899999999986432  2446678899999999998762211               


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++++|||++........   
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~---  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD---  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc---
Confidence                           13478889999999999999999999999999999999998766555555544322111000   


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                                       ..........|+..|+|||++... .++.++|+|||||++|+|++|..||...+.........
T Consensus       158 -----------------~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~  220 (267)
T cd06610         158 -----------------RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL  220 (267)
T ss_pred             -----------------ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh
Confidence                             000011234688999999999876 68899999999999999999999997665543332221


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +.   .+..                    +..                     .......+..+.+|+.+||..||++||
T Consensus       221 ~~---~~~~--------------------~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp  256 (267)
T cd06610         221 QN---DPPS--------------------LET---------------------GADYKKYSKSFRKMISLCLQKDPSKRP  256 (267)
T ss_pred             cC---CCCC--------------------cCC---------------------ccccccccHHHHHHHHHHcCCChhhCc
Confidence            10   0000                    000                     000124567889999999999999999


Q ss_pred             CHHHHHcCCCC
Q 015532          379 KAREALRHPFF  389 (405)
Q Consensus       379 ta~elL~hp~f  389 (405)
                      |++++++||||
T Consensus       257 ~~~~ll~~p~~  267 (267)
T cd06610         257 TAEELLKHKFF  267 (267)
T ss_pred             CHHHHhhCCCC
Confidence            99999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=4e-36  Score=283.34  Aligned_cols=245  Identities=25%  Similarity=0.371  Sum_probs=180.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.|++.+.||+|+||.||++.+..+++.||||.+....    ...+.+..|+++++.+.|+++....             
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            35999999999999999999999999999999986532    2334567899999999998773211             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.|++.||.|||++||+||||||+||+++..+.++++|||++.......     
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~-----  155 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL-----  155 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc-----
Confidence                          1346788899999999999999999999999999999999988877777777643211100     


Q ss_pred             CCCCCCceeccCCCCccc-cCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                           ...+.+....... ........|+..|+|||.+.+..++.++|||||||++|+|++|..||.+....+....+..
T Consensus       156 -----~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~  230 (305)
T cd05609         156 -----TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS  230 (305)
T ss_pred             -----cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence                 0000000000000 0011124578899999999888899999999999999999999999987665544433322


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ....                        ++.                       .....+..+.+||.+||+.||++||+
T Consensus       231 ~~~~------------------------~~~-----------------------~~~~~~~~~~~li~~~l~~~P~~R~~  263 (305)
T cd05609         231 DDIE------------------------WPE-----------------------GDEALPADAQDLISRLLRQNPLERLG  263 (305)
T ss_pred             cccC------------------------CCC-----------------------ccccCCHHHHHHHHHHhccChhhccC
Confidence            1100                        000                       00134668899999999999999997


Q ss_pred             ---HHHHHcCCCCCCCC
Q 015532          380 ---AREALRHPFFTRDV  393 (405)
Q Consensus       380 ---a~elL~hp~f~~~~  393 (405)
                         +.++|+||||....
T Consensus       264 ~~~~~~ll~~~~~~~~~  280 (305)
T cd05609         264 TGGAFEVKQHRFFLGLD  280 (305)
T ss_pred             ccCHHHHHhCccccCCC
Confidence               89999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-38  Score=316.40  Aligned_cols=233  Identities=26%  Similarity=0.443  Sum_probs=176.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhh------------cCC-----
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLAR------------HDI-----  150 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~------------~~~-----  150 (405)
                      +.|+|+++||+|+||.|.+++++.+++.||+|++++...    ....|..|-.||..-+.            .+.     
T Consensus        75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVM  154 (1317)
T KOG0612|consen   75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVM  154 (1317)
T ss_pred             HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEE
Confidence            579999999999999999999999999999999976332    23445556555543221            111     


Q ss_pred             ----CCC------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          151 ----GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       151 ----~~~------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                          +|.      .+..++++.+++|+..|+.||+-||+.|+|||||||+||||+..|++|++|||.+-.+..+      
T Consensus       155 dY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d------  228 (1317)
T KOG0612|consen  155 DYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD------  228 (1317)
T ss_pred             ecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC------
Confidence                111      1457999999999999999999999999999999999999998887666666543222211      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                                  |..     .....+|||.|++||++..     +.|+..+|+||+||++|||+.|..||..++-.+...
T Consensus       229 ------------G~V-----~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~  291 (1317)
T KOG0612|consen  229 ------------GTV-----RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYG  291 (1317)
T ss_pred             ------------CcE-----EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHH
Confidence                        111     1123589999999999973     358899999999999999999999998877666665


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .|..--                      -.+.+|+                        ...+|.++++||.++|. +|+
T Consensus       292 KIm~hk----------------------~~l~FP~------------------------~~~VSeeakdLI~~ll~-~~e  324 (1317)
T KOG0612|consen  292 KIMNHK----------------------ESLSFPD------------------------ETDVSEEAKDLIEALLC-DRE  324 (1317)
T ss_pred             HHhchh----------------------hhcCCCc------------------------ccccCHHHHHHHHHHhc-Chh
Confidence            554320                      0111211                        12468899999999776 899


Q ss_pred             CCCC---HHHHHcCCCCCCCCC
Q 015532          376 ERLK---AREALRHPFFTRDVR  394 (405)
Q Consensus       376 ~Rpt---a~elL~hp~f~~~~~  394 (405)
                      .|..   ++++.+||||.+..+
T Consensus       325 ~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  325 VRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             hhcccccHHHHHhCccccCCCh
Confidence            9998   999999999998765

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-37  Score=283.17  Aligned_cols=229  Identities=25%  Similarity=0.390  Sum_probs=181.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCC----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIG----------------  151 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~----------------  151 (405)
                      ..|..+.+||+|+||.|.+|..+.+.+.||||++++.-    ...+.-+.|-.+|.....+...                
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            46899999999999999999999999999999997632    2234445566665544444321                


Q ss_pred             ------C------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          152 ------G------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       152 ------~------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                            +      ..++.|.|..+..++.+|+.||-|||++|||.||||.+|||++.+|++||+|||+++....      
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~------  502 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF------  502 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc------
Confidence                  1      1146788999999999999999999999999999999999998888665555554332111      


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                                        ......+++||+.|+|||++.-.+|+..+|+||+||+||||+.|++||++.+..+.+..|..
T Consensus       503 ------------------~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e  564 (683)
T KOG0696|consen  503 ------------------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME  564 (683)
T ss_pred             ------------------CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence                              11223458999999999999999999999999999999999999999999999988887765


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      -.-..|                                                  ...|.++.++.+..|...|.+|..
T Consensus       565 hnvsyP--------------------------------------------------KslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  565 HNVSYP--------------------------------------------------KSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             ccCcCc--------------------------------------------------ccccHHHHHHHHHHhhcCCccccC
Confidence            332222                                                  345778999999999999999984


Q ss_pred             -----HHHHHcCCCCCCCCC
Q 015532          380 -----AREALRHPFFTRDVR  394 (405)
Q Consensus       380 -----a~elL~hp~f~~~~~  394 (405)
                           -.+|-.||||+.-.+
T Consensus       595 cg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  595 CGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             CCCccccchhhCcchhhccH
Confidence                 368999999987543

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-36  Score=280.03  Aligned_cols=249  Identities=31%  Similarity=0.514  Sum_probs=181.5

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      |++.+.||+|+||.||+|.+..+++.||+|++...   ......+..|+.+++.+.|+++....                
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            78899999999999999999999999999999754   23345677899999999998763211                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++|++|+||||+||+++.++.+                     
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~---------------------  139 (287)
T cd07840          81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVL---------------------  139 (287)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCE---------------------
Confidence                         1357888999999999999999999999999999999999876655                     


Q ss_pred             CCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                            +|+|||.+......    .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...+....+..
T Consensus       140 ------~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~  213 (287)
T cd07840         140 ------KLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEK  213 (287)
T ss_pred             ------EEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                  45555544332221    1223567889999987654 578999999999999999999999998887777777


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC-chHHHHHHHHHccccCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~  375 (405)
                      +....+.++..........           .+..         .............+.... .+..+.+++.+||..||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~-----------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~  273 (287)
T cd07840         214 IFELCGSPTDENWPGVSKL-----------PWFE---------NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPK  273 (287)
T ss_pred             HHHHhCCCchhhccccccc-----------hhhh---------hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChh
Confidence            7666655443221111000           0000         000000001111111122 377899999999999999


Q ss_pred             CCCCHHHHHcCCCC
Q 015532          376 ERLKAREALRHPFF  389 (405)
Q Consensus       376 ~Rpta~elL~hp~f  389 (405)
                      +|||+.++++||||
T Consensus       274 ~Rp~~~~~l~~~~~  287 (287)
T cd07840         274 KRISADQALQHEYF  287 (287)
T ss_pred             hCcCHHHHhhCcCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-36  Score=275.72  Aligned_cols=225  Identities=27%  Similarity=0.420  Sum_probs=175.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|++.... ...+.+..|+++++.+.|+++....                
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            57999999999999999999999899999999986532 2346678899999999999873321                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.                       
T Consensus        83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~-----------------------  139 (262)
T cd06613          83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGD-----------------------  139 (262)
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCC-----------------------
Confidence                        145788899999999999999999999999999999999987654                       


Q ss_pred             CCCCceeccCCCCccccC---CccceecCCCcchhHHHhCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                          ++|+|||.+.....   ......++..|+|||.+.+.   .++.++|+|||||++|+|++|.+||...+.......
T Consensus       140 ----~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~  215 (262)
T cd06613         140 ----VKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL  215 (262)
T ss_pred             ----EEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                45555555543222   11234678899999999876   788999999999999999999999987665544333


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.......+                                             ........+.++.+||.+||..||++
T Consensus       216 ~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~  250 (262)
T cd06613         216 ISKSNFPPP---------------------------------------------KLKDKEKWSPVFHDFIKKCLTKDPKK  250 (262)
T ss_pred             HHhccCCCc---------------------------------------------cccchhhhhHHHHHHHHHHcCCChhh
Confidence            221100000                                             00001123567899999999999999


Q ss_pred             CCCHHHHHcCCC
Q 015532          377 RLKAREALRHPF  388 (405)
Q Consensus       377 Rpta~elL~hp~  388 (405)
                      |||+.+++.|+|
T Consensus       251 Rpt~~~il~~~~  262 (262)
T cd06613         251 RPTATKLLQHPF  262 (262)
T ss_pred             CCCHHHHhcCCC
Confidence            999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=6.8e-36  Score=277.52  Aligned_cols=244  Identities=27%  Similarity=0.374  Sum_probs=182.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHh-hcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLA-RHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~-~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...    ......+..|+++++++. |+++....            
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            3699999999999999999999999999999998652    223456778999999998 88763211            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++++|||+............
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence                           13578899999999999999999999999999999999999988888888887654432221000


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                      ..    .....++..............++..|+|||++.+..++.++|||||||+++++++|..||........+..+..
T Consensus       161 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  236 (280)
T cd05581         161 NK----GDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILK  236 (280)
T ss_pred             CC----CCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence            00    00001111111111222335688999999999888899999999999999999999999987664443333221


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ...                                                  .....+++.+.+||.+||+.||++|||
T Consensus       237 ~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~  266 (280)
T cd05581         237 LEY--------------------------------------------------SFPPNFPPDAKDLIEKLLVLDPQDRLG  266 (280)
T ss_pred             cCC--------------------------------------------------CCCCccCHHHHHHHHHHhcCCHhhCCC
Confidence            111                                                  111233568899999999999999999


Q ss_pred             H----HHHHcCCCC
Q 015532          380 A----REALRHPFF  389 (405)
Q Consensus       380 a----~elL~hp~f  389 (405)
                      +    +++++||||
T Consensus       267 ~~~~~~~ll~~~~~  280 (280)
T cd05581         267 VNEGYDELKAHPFF  280 (280)
T ss_pred             cccCHHHHhcCCCC
Confidence            9    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=2e-36  Score=283.72  Aligned_cols=229  Identities=27%  Similarity=0.397  Sum_probs=176.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .++|++.+.||+|+||.||++.+..++..||+|.+... ....+.+.+|+.+++.+.|+++....               
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            36899999999999999999999888999999998643 23345678899999999998863311               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.                        
T Consensus        98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~------------------------  153 (293)
T cd06647          98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS------------------------  153 (293)
T ss_pred             CCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCC------------------------
Confidence                       124678889999999999999999999999999999999976554                        


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                         ++|+|||++......   .....|++.|+|||.+.+..++.++|+|||||++|++++|..||...+....+..+.. 
T Consensus       154 ---~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-  229 (293)
T cd06647         154 ---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-  229 (293)
T ss_pred             ---EEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-
Confidence               455555554332211   1224688899999999888899999999999999999999999977654332221110 


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                       +..                                             .........+..+.+||.+||..||++||++
T Consensus       230 -~~~---------------------------------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~  263 (293)
T cd06647         230 -NGT---------------------------------------------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSA  263 (293)
T ss_pred             -CCC---------------------------------------------CCCCCccccCHHHHHHHHHHccCChhhCcCH
Confidence             000                                             0001112345678999999999999999999


Q ss_pred             HHHHcCCCCCCCC
Q 015532          381 REALRHPFFTRDV  393 (405)
Q Consensus       381 ~elL~hp~f~~~~  393 (405)
                      .+++.|+||+...
T Consensus       264 ~~il~h~~~~~~~  276 (293)
T cd06647         264 KELLQHPFLKIAK  276 (293)
T ss_pred             HHHhcCHHHhcCc
Confidence            9999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=3.1e-37  Score=313.62  Aligned_cols=246  Identities=27%  Similarity=0.364  Sum_probs=175.7

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ....|+.++.||+||||.||+++.+-+|+.||||+|...  .+......+|+.+|.+|+|+|+++..             
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            345688899999999999999999999999999999654  44456678899999999999871110             


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------------------------cccC--CHHHHHHHHHHHHHHHHHHHHC
Q 015532          155 ----------------------------------------------------YRSF--PIDLVRELGRQLLESVAFMHEL  180 (405)
Q Consensus       155 ----------------------------------------------------~~~l--~~~~~~~~~~qi~~aL~~LH~~  180 (405)
                                                                          ...+  .....+++++||+.||.|+|++
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~  716 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ  716 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence                                                                0111  1456788999999999999999


Q ss_pred             CcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCcccc-CCccceecCCCcchhHHHhC
Q 015532          181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH-QDHSYVVSTRHYRAPEVILG  259 (405)
Q Consensus       181 givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~  259 (405)
                      |||||||||.||++++.+.+||+|||++........       .......+.+.-.... ...+..+||.-|+|||++.+
T Consensus       717 giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~-------~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  717 GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLE-------SIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             ceeeccCCcceeEEcCCCCeeecccccchhhhhhhh-------hHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            999999999999999999999999998754221110       0011111111111111 13455799999999999987


Q ss_pred             CC---CCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCch
Q 015532          260 LG---WNYPCDLWSVGCILVELCSGEALFQTHENL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR  335 (405)
Q Consensus       260 ~~---~~~~~DiwSlG~il~~lltg~~pf~~~~~~-~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (405)
                      ..   |+.|+||||||||+|||+.   ||...-+. ..+..+.  -|.+|..                            
T Consensus       790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR--~g~iP~~----------------------------  836 (1351)
T KOG1035|consen  790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR--KGSIPEP----------------------------  836 (1351)
T ss_pred             cccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc--cCCCCCC----------------------------
Confidence            54   9999999999999999984   46543221 2222222  1222211                            


Q ss_pred             hhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                                      .......-+.-..+|+.||+.||.+||||.|+|++.||-.
T Consensus       837 ----------------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  837 ----------------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             ----------------cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence                            0011111234468999999999999999999999999985

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=8.1e-36  Score=273.65  Aligned_cols=222  Identities=27%  Similarity=0.424  Sum_probs=173.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||+|+||.||+|.++.++..||+|.+....   ...+.+.+|+++++.++|+++....               
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            5899999999999999999999999999999986431   3345677899999999998873211               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||+++|+|+||||+||+++.++.                     
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~---------------------  139 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM---------------------  139 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC---------------------
Confidence                          123678889999999999999999999999999999999976432                     


Q ss_pred             CCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           .++|+|||.+.......   ....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+....+
T Consensus       140 -----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~  214 (257)
T cd08225         140 -----VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI  214 (257)
T ss_pred             -----eEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence                 35667776665433221   1235888999999998888999999999999999999999999766544433221


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ..  +..+                                               ......+.++.++|.+||..+|++|
T Consensus       215 ~~--~~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~R  245 (257)
T cd08225         215 CQ--GYFA-----------------------------------------------PISPNFSRDLRSLISQLFKVSPRDR  245 (257)
T ss_pred             hc--ccCC-----------------------------------------------CCCCCCCHHHHHHHHHHhccChhhC
Confidence            11  0000                                               0012345689999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||+.++++||||
T Consensus       246 pt~~~ll~~~~~  257 (257)
T cd08225         246 PSITSILKRPFL  257 (257)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.1e-36  Score=289.14  Aligned_cols=220  Identities=21%  Similarity=0.338  Sum_probs=163.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~---------  154 (405)
                      ++|++.+.||+|+||.||+|.+..     +++.||+|+++...  ...+.+..|++++.++ .|+++....         
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            579999999999999999997543     45789999986432  2335577899999999 666652110         


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence                                                                                            


Q ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCC
Q 015532          155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS  234 (405)
Q Consensus       155 ~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  234 (405)
                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                           ++|+|||+
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~---------------------------vkL~DfG~  219 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNV---------------------------VKICDFGL  219 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCc---------------------------EEEecccc
Confidence            014677888999999999999999999999999999999986654                           45555555


Q ss_pred             CccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHH
Q 015532          235 TTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHM  308 (405)
Q Consensus       235 a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~  308 (405)
                      +.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+......        
T Consensus       220 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~--------  291 (337)
T cd05054         220 ARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE--------  291 (337)
T ss_pred             chhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc--------
Confidence            54332111     12345678999999999999999999999999999998 99999764433222111100        


Q ss_pred             HHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                                    +..                          .......++++.+++.+||+.+|++|||+.|+++|
T Consensus       292 --------------~~~--------------------------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         292 --------------GTR--------------------------MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             --------------cCC--------------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                          000                          00112345688999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=6.2e-36  Score=280.58  Aligned_cols=239  Identities=16%  Similarity=0.203  Sum_probs=158.4

Q ss_pred             eCCccCCCeEEEeeeecccceeEEEEEecCC---CcEEEEEEecchhhh--hH----------HHHHHHHHHHHHhhcCC
Q 015532           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKY--RE----------AAMIEIDVLQRLARHDI  150 (405)
Q Consensus        86 ~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~~~~--~~----------~~~~E~~il~~l~~~~~  150 (405)
                      +.+...++|++.++||+|+||+||+|.+..+   +..+|+|+.......  .+          ....+...+..+.|.++
T Consensus         6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i   85 (294)
T PHA02882          6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI   85 (294)
T ss_pred             eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence            3455668899999999999999999998877   677888865322111  00          11122233344455554


Q ss_pred             CCCc------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccc
Q 015532          151 GGTR------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       151 ~~~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~  200 (405)
                      ....                              ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~  165 (294)
T PHA02882         86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG  165 (294)
T ss_pred             CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence            2210                              1134677788999999999999999999999999999999776655


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       201 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                      +++|||++.....++..                 ............||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       166 ~l~DFGla~~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~  228 (294)
T PHA02882        166 YIIDYGIASHFIIHGKH-----------------IEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAG  228 (294)
T ss_pred             EEEEcCCceeeccCCcc-----------------cccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            44444443222111000                 0000011122469999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHH--HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCc
Q 015532          281 GEALFQTHENLEHLAMMER--VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  358 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~--~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (405)
                      |..||.+............  ....+                                         ....   ......
T Consensus       229 g~~P~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~---~~~~~~  264 (294)
T PHA02882        229 IKLPWKGFGHNGNLIHAAKCDFIKRL-----------------------------------------HEGK---IKIKNA  264 (294)
T ss_pred             CCCCCCccccchHHHHHhHHHHHHHh-----------------------------------------hhhh---hccCCC
Confidence            9999987643222211111  00000                                         0000   011233


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          359 AGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       359 ~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      ++.+.+++..|+..+|++||+.+++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        265 NKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             CHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            568999999999999999999999975

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.3e-36  Score=280.38  Aligned_cols=228  Identities=27%  Similarity=0.464  Sum_probs=175.2

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      +|++.+.||+|+||.||+|.++.+++.||+|.+...  ......+.+|+++++.+.|+++....                
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            588899999999999999999999999999998653  23456678899999999998873211                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                  ...+++..+..++.|++.||.|||+ .|++|+||||+||+++.++                       
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~-----------------------  138 (265)
T cd06605          82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG-----------------------  138 (265)
T ss_pred             CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC-----------------------
Confidence                        1456888899999999999999999 9999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCCc-cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN--LEHLAMME  298 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~--~~~~~~i~  298 (405)
                          .++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++|..||.....  ......+.
T Consensus       139 ----~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  214 (265)
T cd06605         139 ----QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ  214 (265)
T ss_pred             ----CEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence                46667777664432211 125688899999999998999999999999999999999999965421  11111111


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ......+.                                          ..   ....++..+.+||.+||..||++||
T Consensus       215 ~~~~~~~~------------------------------------------~~---~~~~~~~~~~~li~~~l~~~p~~Rp  249 (265)
T cd06605         215 YIVNEPPP------------------------------------------RL---PSGKFSPDFQDFVNLCLIKDPRERP  249 (265)
T ss_pred             HHhcCCCC------------------------------------------CC---ChhhcCHHHHHHHHHHcCCCchhCc
Confidence            11110000                                          00   0011466899999999999999999


Q ss_pred             CHHHHHcCCCCCCC
Q 015532          379 KAREALRHPFFTRD  392 (405)
Q Consensus       379 ta~elL~hp~f~~~  392 (405)
                      |+.+++.||||++.
T Consensus       250 t~~~ll~~~~~~~~  263 (265)
T cd06605         250 SYKELLEHPFIKKY  263 (265)
T ss_pred             CHHHHhhCchhhcc
Confidence            99999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=7e-36  Score=308.47  Aligned_cols=118  Identities=22%  Similarity=0.372  Sum_probs=102.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.++||+|+||+||+|++..+++.||||+++...    .....+..|+.++..+.|+++....             
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57999999999999999999999999999999997532    2335677899999999999874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                    ...+++..++.++.||+.||+|||++|||||||||+|||++.++.++|+|||++.
T Consensus        84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence                          2346788899999999999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=7e-36  Score=276.71  Aligned_cols=226  Identities=26%  Similarity=0.440  Sum_probs=169.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-----------hhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------KYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----------~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      +|.+.+.||+|+||.||+|.+..+++.||||.++...           ...+.+..|+.+++.+.|+++....       
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            5889999999999999999998899999999885311           1124567799999999998763211       


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++|++||||||+||+++.++.++++||         
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~---------  152 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDF---------  152 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeec---------
Confidence                                135788899999999999999999999999999999999987665555554         


Q ss_pred             CCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCC--CCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                        |.+.....     ......|+..|+|||.+.+..  ++.++|+||||+++|++++|..||..
T Consensus       153 ------------------~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  214 (272)
T cd06629         153 ------------------GISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD  214 (272)
T ss_pred             ------------------cccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence                              44432211     112246788999999988754  78999999999999999999999975


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      ......+..+...                      .....+                      .......++..+.+||.
T Consensus       215 ~~~~~~~~~~~~~----------------------~~~~~~----------------------~~~~~~~~~~~~~~li~  250 (272)
T cd06629         215 EEAIAAMFKLGNK----------------------RSAPPI----------------------PPDVSMNLSPVALDFLN  250 (272)
T ss_pred             cchHHHHHHhhcc----------------------ccCCcC----------------------CccccccCCHHHHHHHH
Confidence            5443322211100                      000000                      00111234678999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      +||..||++|||++++|+||||
T Consensus       251 ~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         251 ACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHhcCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=8.7e-36  Score=278.33  Aligned_cols=228  Identities=27%  Similarity=0.431  Sum_probs=175.4

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      .|...+.||+|++|.||++.+..+++.||+|+++... ...+.+.+|+.+++.+.|+++....                 
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            4566689999999999999998899999999886433 2345577899999999998863321                 


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                         
T Consensus       100 ~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~-------------------------  154 (285)
T cd06648         100 GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRV-------------------------  154 (285)
T ss_pred             CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcE-------------------------
Confidence                     1346788899999999999999999999999999999999776654                         


Q ss_pred             CceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                        +|+|||.+......   .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+.......+.... 
T Consensus       155 --~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-  231 (285)
T cd06648         155 --KLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-  231 (285)
T ss_pred             --EEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-
Confidence              55555544322211   122468889999999988889999999999999999999999998765544443332210 


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                       .+                                             .......++..+.+||.+||+.||++|||+.+
T Consensus       232 -~~---------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  265 (285)
T cd06648         232 -PP---------------------------------------------KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAE  265 (285)
T ss_pred             -CC---------------------------------------------CCcccccCCHHHHHHHHHHcccChhhCcCHHH
Confidence             00                                             00001124568999999999999999999999


Q ss_pred             HHcCCCCCCCCC
Q 015532          383 ALRHPFFTRDVR  394 (405)
Q Consensus       383 lL~hp~f~~~~~  394 (405)
                      +++||||+....
T Consensus       266 il~~~~~~~~~~  277 (285)
T cd06648         266 LLNHPFLAKAGP  277 (285)
T ss_pred             HccCcccccCCC
Confidence            999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.3e-36  Score=289.74  Aligned_cols=276  Identities=18%  Similarity=0.215  Sum_probs=173.3

Q ss_pred             eeeecc--cceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEG--TFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G--~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      ..||+|  +||+||+|++..+++.||||++....   ...+.+.+|+.+++.+.|+++....                  
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            467777  99999999999999999999986432   2345677899999999999984311                  


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.......        
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~--------  155 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG--------  155 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccC--------
Confidence                       1236788888999999999999999999999999999999988888887776432111110        


Q ss_pred             CCCceeccCCCCccccCCccceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                               +.............++..|+|||++.+.  .++.++|||||||++|+|++|..||................
T Consensus       156 ---------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~  226 (328)
T cd08226         156 ---------QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGP  226 (328)
T ss_pred             ---------ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCC
Confidence                     0000000011112356679999999764  47899999999999999999999998766544333222211


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                      ...|....... .........  ...+..............................++.+.+||++||++||++|||+.
T Consensus       227 ~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~  303 (328)
T cd08226         227 PYSPLDITTFP-CEESRMKNS--QSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSAS  303 (328)
T ss_pred             CCCCccccccc-hhhhhhccc--hhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHH
Confidence            11111000000 000000000  000000000000000000000000001111234567899999999999999999999


Q ss_pred             HHHcCCCCCCCC
Q 015532          382 EALRHPFFTRDV  393 (405)
Q Consensus       382 elL~hp~f~~~~  393 (405)
                      |+|+||||++..
T Consensus       304 e~l~~~~~~~~~  315 (328)
T cd08226         304 SLLSHAFFKQVK  315 (328)
T ss_pred             HHhhCHHHHHHH
Confidence            999999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-35  Score=276.82  Aligned_cols=246  Identities=34%  Similarity=0.587  Sum_probs=176.7

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHh---hcCCCCCc-------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA---RHDIGGTR-------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~---~~~~~~~~-------------  154 (405)
                      |++.+.||+|+||.||+|++..+++.||||+++...   .....+..|+.+++++.   |+++....             
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            688999999999999999998889999999996422   22345667888887774   77652110             


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++|++|+||+|+||+++.++.               
T Consensus        81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~---------------  145 (287)
T cd07838          81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQ---------------  145 (287)
T ss_pred             eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCC---------------
Confidence                                124788899999999999999999999999999999999987654               


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                                  ++|+|||.+.......  ....++..|+|||++.+..++.++|+|||||++|+|++|.+||.+....+
T Consensus       146 ------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~  213 (287)
T cd07838         146 ------------VKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD  213 (287)
T ss_pred             ------------EEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH
Confidence                        5555555554332211  12357888999999998889999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+....+.....                   .|+.......   .... ..............+..+.+||.+||+.
T Consensus       214 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~  270 (287)
T cd07838         214 QLDKIFDVIGLPSEE-------------------EWPRNVSLPR---SSFP-SYTPRSFKSFVPEICEEGLDLLKKMLTF  270 (287)
T ss_pred             HHHHHHHHcCCCChH-------------------hcCCCcccch---hhcc-cccccchhhhhhhhhHHHHHHHHHHhcc
Confidence            776665544322111                   1110000000   0000 0000000111223467889999999999


Q ss_pred             CCCCCCCHHHHHcCCCC
Q 015532          373 DPAERLKAREALRHPFF  389 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f  389 (405)
                      ||++||+++|+++||||
T Consensus       271 dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         271 NPHKRISAFEALQHPYF  287 (287)
T ss_pred             CCccCCCHHHHhcCcCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=8.5e-36  Score=300.86  Aligned_cols=248  Identities=22%  Similarity=0.273  Sum_probs=153.4

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC----CcEEEEEEecchhhhhHHHHHHH----------HHHHHHhhcCC------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK----KELVAIKIVRSINKYREAAMIEI----------DVLQRLARHDI------  150 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~----~~~vAiK~~~~~~~~~~~~~~E~----------~il~~l~~~~~------  150 (405)
                      .++|++.++||+|+||.||+|++..+    +..||||++..... .+....|.          ..+..+.+...      
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE  209 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence            46899999999999999999999988    89999998854221 11111110          00001000000      


Q ss_pred             ---------CCCcc--------------------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe
Q 015532          151 ---------GGTRY--------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  195 (405)
Q Consensus       151 ---------~~~~~--------------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~  195 (405)
                               .+.++                          ....+..+..++.||+.||.|||++||+||||||+|||++
T Consensus       210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~  289 (566)
T PLN03225        210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS  289 (566)
T ss_pred             eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe
Confidence                     00000                          0112345678999999999999999999999999999997


Q ss_pred             cccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC-----------
Q 015532          196 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-----------  260 (405)
Q Consensus       196 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-----------  260 (405)
                      .+                          +..+||+|||++......    .....+|+.|+|||.+...           
T Consensus       290 ~~--------------------------~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~  343 (566)
T PLN03225        290 EG--------------------------SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPV  343 (566)
T ss_pred             CC--------------------------CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccc
Confidence            42                          234677777777543221    2345789999999976532           


Q ss_pred             -----------CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCC
Q 015532          261 -----------GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP  329 (405)
Q Consensus       261 -----------~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  329 (405)
                                 .++.++|||||||++|||+++..++.  +....+..+....+.....+....        ...      
T Consensus       344 ~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~--------~~~------  407 (566)
T PLN03225        344 ATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLV--------EPR------  407 (566)
T ss_pred             cccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhh--------ccc------
Confidence                       23456799999999999998765543  333233222222221111110000        000      


Q ss_pred             CCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCC
Q 015532          330 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~  395 (405)
                         ... ...          ...+..+.....+.|||.+||++||++|||+.|+|+||||++....
T Consensus       408 ---~~~-~~~----------~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~  459 (566)
T PLN03225        408 ---ASP-DLR----------RGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL  459 (566)
T ss_pred             ---cch-hhh----------hhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence               000 000          0011112234467799999999999999999999999999886543

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.1e-35  Score=280.08  Aligned_cols=226  Identities=22%  Similarity=0.273  Sum_probs=165.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC----------------CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCC
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG  152 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~  152 (405)
                      .++|++.++||+|+||.||+|.+..                ++..||||+++..  ......+.+|+.++.++.|+++..
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3679999999999999999998632                3457999998653  234566889999999999998732


Q ss_pred             Cc----------------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecC
Q 015532          153 TR----------------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTD  186 (405)
Q Consensus       153 ~~----------------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrD  186 (405)
                      ..                                              ...+++..+..++.||+.||.|||++||+|||
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            11                                              01245667889999999999999999999999


Q ss_pred             CCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCC
Q 015532          187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLG  261 (405)
Q Consensus       187 lkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~  261 (405)
                      |||+|||++.++.                           +||+|||++.......     ....++..|+|||++.+..
T Consensus       164 lkp~Nill~~~~~---------------------------~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  216 (304)
T cd05096         164 LATRNCLVGENLT---------------------------IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGK  216 (304)
T ss_pred             cchhheEEcCCcc---------------------------EEECCCccceecccCceeEecCcCCCCccccCHHHHhcCC
Confidence            9999999976654                           5555555554322111     1234577899999999888


Q ss_pred             CCCchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHH
Q 015532          262 WNYPCDLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR  339 (405)
Q Consensus       262 ~~~~~DiwSlG~il~~llt--g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (405)
                      ++.++|||||||++|+|++  +..||...+..+.+..+.......                   ...             
T Consensus       217 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------------~~~-------------  264 (304)
T cd05096         217 FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQ-------------------GRQ-------------  264 (304)
T ss_pred             CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhc-------------------ccc-------------
Confidence            9999999999999999986  667887766555444332211000                   000             


Q ss_pred             HHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                                ........++..+.+|+.+||+.||++|||++||.+
T Consensus       265 ----------~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         265 ----------VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             ----------ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence                      000011234668999999999999999999999954

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.3e-35  Score=273.29  Aligned_cols=230  Identities=28%  Similarity=0.454  Sum_probs=171.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---hhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ||++.+.||+|+||.||+|.+..+++.||+|+++....   ....+..|+++++.+.|+++....               
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            69999999999999999999988999999999875433   456778899999999998863211               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++++|||++.........     
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~-----  155 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT-----  155 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc-----
Confidence                        123678889999999999999999999999999999999987665555555543222111000     


Q ss_pred             CCCCceeccCCCCccccCCccceecCCCcchhHHHhCCC---CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALFQTHENLEHL-AMME  298 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~-~~i~  298 (405)
                                     .........++..|+|||++.+..   ++.++|||||||++|++++|..||......... ..+.
T Consensus       156 ---------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~  220 (264)
T cd06626         156 ---------------MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG  220 (264)
T ss_pred             ---------------ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh
Confidence                           000011235788999999998766   889999999999999999999999765332221 1111


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .  +..+                     ..+                        .....+..+.+||.+||+.||++||
T Consensus       221 ~--~~~~---------------------~~~------------------------~~~~~~~~~~~li~~~l~~~p~~R~  253 (264)
T cd06626         221 A--GHKP---------------------PIP------------------------DSLQLSPEGKDFLDRCLESDPKKRP  253 (264)
T ss_pred             c--CCCC---------------------CCC------------------------cccccCHHHHHHHHHHccCCcccCC
Confidence            1  1100                     000                        0112356788999999999999999


Q ss_pred             CHHHHHcCCCC
Q 015532          379 KAREALRHPFF  389 (405)
Q Consensus       379 ta~elL~hp~f  389 (405)
                      |+.+++.|||+
T Consensus       254 ~~~~i~~~~~~  264 (264)
T cd06626         254 TASELLQHPFV  264 (264)
T ss_pred             CHHHHhcCCCC
Confidence            99999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.9e-35  Score=276.19  Aligned_cols=237  Identities=22%  Similarity=0.378  Sum_probs=174.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|+..++||.|++|.||+|.+..+++.||+|++....  .....+.+|+++++.+.|+++....               
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            46999999999999999999999999999999986432  3456688999999999999873311               


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.                 
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~-----------------  143 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQ-----------------  143 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCe-----------------
Confidence                              122567778899999999999999999999999999999976654                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN--LEH  293 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~--~~~  293 (405)
                                ++|+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||.....  ...
T Consensus       144 ----------~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  213 (287)
T cd06621         144 ----------VKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGP  213 (287)
T ss_pred             ----------EEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCCh
Confidence                      555566555432211 1224578889999999988899999999999999999999999976522  000


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...........+.                    ..+.                    ........++.+.+||.+||..|
T Consensus       214 ~~~~~~~~~~~~~--------------------~~~~--------------------~~~~~~~~~~~~~~li~~~l~~~  253 (287)
T cd06621         214 IELLSYIVNMPNP--------------------ELKD--------------------EPGNGIKWSEEFKDFIKQCLEKD  253 (287)
T ss_pred             HHHHHHHhcCCch--------------------hhcc--------------------CCCCCCchHHHHHHHHHHHcCCC
Confidence            1111110000000                    0000                    00000123568899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~~  395 (405)
                      |++|||+.|+++||||+...+.
T Consensus       254 p~~Rpt~~eil~~~~~~~~~~~  275 (287)
T cd06621         254 PTRRPTPWDMLEHPWIKAQMKK  275 (287)
T ss_pred             cccCCCHHHHHhCccccccccc
Confidence            9999999999999999776543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=6e-36  Score=283.58  Aligned_cols=219  Identities=21%  Similarity=0.271  Sum_probs=165.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc----EEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|++.+.||+|+||.||+|++..+++    .||||+++..  ....+.+..|+.+++.+.|+++....           
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            469999999999999999999866655    3899998643  23456788899999999999884321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||+|||++||+||||||+|||++.++.                   
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~-------------------  147 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH-------------------  147 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc-------------------
Confidence                            123567788899999999999999999999999999999976654                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCcc-----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                              +||+|||++........     ...++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       148 --------~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~  219 (316)
T cd05108         148 --------VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  219 (316)
T ss_pred             --------EEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                    55555555544322111     1124567999999999899999999999999999997 999998765443


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+ .....+                      .                          ....++.++.+++.+||..
T Consensus       220 ~~~~~-~~~~~~----------------------~--------------------------~~~~~~~~~~~li~~cl~~  250 (316)
T cd05108         220 ISSIL-EKGERL----------------------P--------------------------QPPICTIDVYMIMVKCWMI  250 (316)
T ss_pred             HHHHH-hCCCCC----------------------C--------------------------CCCCCCHHHHHHHHHHccC
Confidence            32211 110000                      0                          0122355788999999999


Q ss_pred             CCCCCCCHHHHHcC
Q 015532          373 DPAERLKAREALRH  386 (405)
Q Consensus       373 dP~~Rpta~elL~h  386 (405)
                      ||++|||+.+++.+
T Consensus       251 ~p~~Rps~~~l~~~  264 (316)
T cd05108         251 DADSRPKFRELIIE  264 (316)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=3.7e-36  Score=279.51  Aligned_cols=230  Identities=26%  Similarity=0.412  Sum_probs=177.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..|+.+++||.|+||.||+|.+..+++.||||++....  .....+.+|+.+++.+.|+++....               
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            45888999999999999999999899999999986432  3345677899999999998773211               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.+                       
T Consensus        84 ~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~-----------------------  140 (277)
T cd06640          84 LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDV-----------------------  140 (277)
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCE-----------------------
Confidence                       1346788889999999999999999999999999999999876654                       


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                          +|+|||++......   .....++..|+|||++.+..++.++|+|||||++|+|++|..||...........+...
T Consensus       141 ----~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~  216 (277)
T cd06640         141 ----KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN  216 (277)
T ss_pred             ----EEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC
Confidence                55555554332211   12245788999999999888999999999999999999999999876544333221110


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                        ..                                               .......+..+.+|+.+||+.||++||++
T Consensus       217 --~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  247 (277)
T cd06640         217 --NP-----------------------------------------------PTLTGEFSKPFKEFIDACLNKDPSFRPTA  247 (277)
T ss_pred             --CC-----------------------------------------------CCCchhhhHHHHHHHHHHcccCcccCcCH
Confidence              00                                               00112235678899999999999999999


Q ss_pred             HHHHcCCCCCCCCCCCc
Q 015532          381 REALRHPFFTRDVRRPT  397 (405)
Q Consensus       381 ~elL~hp~f~~~~~~~~  397 (405)
                      .++++|+||........
T Consensus       248 ~~il~~~~~~~~~~~~~  264 (277)
T cd06640         248 KELLKHKFIVKNAKKTS  264 (277)
T ss_pred             HHHHhChHhhhcchhhh
Confidence            99999999988766543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-35  Score=275.31  Aligned_cols=248  Identities=33%  Similarity=0.564  Sum_probs=185.4

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      |++.+.||+|+||.||+|++..+++.||+|++...   ....+.+..|+.+++.+.|+++....                
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            67788999999999999999999999999999753   33345677899999999988763211                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.|++.||.|||++||+||||+|+||+++.++.                        
T Consensus        81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~------------------------  136 (282)
T cd07829          81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGV------------------------  136 (282)
T ss_pred             CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCC------------------------
Confidence                       135788999999999999999999999999999999999977654                        


Q ss_pred             CCCceeccCCCCccccCCc---cceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                         ++|+|||.+.......   ....++..|+|||.+.+. .++.++|||||||++|+|++|.+||......+.+..+.+
T Consensus       137 ---~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~  213 (282)
T cd07829         137 ---LKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQ  213 (282)
T ss_pred             ---EEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHH
Confidence               4555555554332211   123457789999999876 788999999999999999999999999888888888877


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .++...+..+.......  ++    ...++...               ...........+..+.++|.+||..||++||+
T Consensus       214 ~~~~~~~~~~~~~~~~~--~~----~~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~  272 (282)
T cd07829         214 ILGTPTEESWPGVTKLP--DY----KPTFPKFP---------------PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS  272 (282)
T ss_pred             HhCCCcHHHHHhhcccc--cc----cccccccC---------------ccchHHhcccccHHHHHHHHHhhccCcccCCC
Confidence            77766554433221110  00    00000000               00001112234678999999999999999999


Q ss_pred             HHHHHcCCCC
Q 015532          380 AREALRHPFF  389 (405)
Q Consensus       380 a~elL~hp~f  389 (405)
                      ++++++||||
T Consensus       273 ~~~~l~~p~~  282 (282)
T cd07829         273 AKEALKHPYF  282 (282)
T ss_pred             HHHHhhCcCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.5e-35  Score=273.26  Aligned_cols=218  Identities=19%  Similarity=0.315  Sum_probs=169.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ..|.+.++||+|+||.||+|.+..+++.||+|+++........+.+|+++++.+.|+++....                 
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            358999999999999999999999999999999876555556788999999999998763211                 


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.|++.||.|||++|++||||||+||+++.++.+                      
T Consensus        86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~----------------------  143 (263)
T cd05052          86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV----------------------  143 (263)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcE----------------------
Confidence                        1246788889999999999999999999999999999999776654                      


Q ss_pred             CCCCceeccCCCCccccCCcc----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                           +|+|||.+........    ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+
T Consensus       144 -----kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~  218 (263)
T cd05052         144 -----KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  218 (263)
T ss_pred             -----EeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence                 5555554443322111    1123567999999998899999999999999999998 99999876654443332


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ....                       .                          .......+.++.++|.+||+.||++|
T Consensus       219 ~~~~-----------------------~--------------------------~~~~~~~~~~~~~li~~cl~~~p~~R  249 (263)
T cd05052         219 EKGY-----------------------R--------------------------MERPEGCPPKVYELMRACWQWNPSDR  249 (263)
T ss_pred             HCCC-----------------------C--------------------------CCCCCCCCHHHHHHHHHHccCCcccC
Confidence            2110                       0                          01112346789999999999999999


Q ss_pred             CCHHHHHc
Q 015532          378 LKAREALR  385 (405)
Q Consensus       378 pta~elL~  385 (405)
                      ||+.++++
T Consensus       250 p~~~~l~~  257 (263)
T cd05052         250 PSFAEIHQ  257 (263)
T ss_pred             CCHHHHHH
Confidence            99999976

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-36  Score=290.47  Aligned_cols=229  Identities=26%  Similarity=0.347  Sum_probs=185.6

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      -.+.|.+.++||+|.|+.|.+|++..++..||||++.+..   ..+....+|+++|+.|.||||+...            
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            3467999999999999999999999999999999997643   2334478899999999999995432            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     .+...+..++.++.|++.|++|||+++|||||||.+|||++                        
T Consensus       134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~------------------------  189 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD------------------------  189 (596)
T ss_pred             EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc------------------------
Confidence                           24556789999999999999999999999999999999975                        


Q ss_pred             CCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                         .+..+||+|||++.+....  ..+.+|++.|.|||++.+..|+ +.+|+||+|+++|.|+.|..||++.+-.+.-..
T Consensus       190 ---~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r  266 (596)
T KOG0586|consen  190 ---ENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR  266 (596)
T ss_pred             ---cccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccch
Confidence               4456888888888766543  3457999999999999998876 889999999999999999999998654332221


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      .....                                           .+       .+.-.+.++.++|++||..+|.+
T Consensus       267 vl~gk-------------------------------------------~r-------Ip~~ms~dce~lLrk~lvl~Psk  296 (596)
T KOG0586|consen  267 VLRGK-------------------------------------------YR-------IPFYMSCDCEDLLRKFLVLNPSK  296 (596)
T ss_pred             heeee-------------------------------------------ec-------ccceeechhHHHHHHhhccCccc
Confidence            11100                                           00       11123568899999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~~  395 (405)
                      |++.+++++|.|.......
T Consensus       297 r~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  297 RGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             cCCHHHhhhhcccchhhhh
Confidence            9999999999999876544

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=5.8e-36  Score=282.50  Aligned_cols=230  Identities=25%  Similarity=0.369  Sum_probs=177.2

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ....+|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+++++.+.|+++....          
T Consensus        12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~   91 (307)
T cd06607          12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAW   91 (307)
T ss_pred             CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEE
Confidence            34567999999999999999999999899999999985322    2234577899999999999863211          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.                  
T Consensus        92 lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~------------------  153 (307)
T cd06607          92 LVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGT------------------  153 (307)
T ss_pred             EEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCC------------------
Confidence                             234788899999999999999999999999999999999976554                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                               ++|+|||++...... ....++..|+|||++.   ...++.++||||||+++|+|++|..||...+.....
T Consensus       154 ---------~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~  223 (307)
T cd06607         154 ---------VKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  223 (307)
T ss_pred             ---------EEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH
Confidence                     566666655443322 2346788999999875   345889999999999999999999999776554433


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+...  ..|.                     .                         ....++..+.+||.+||..||
T Consensus       224 ~~~~~~--~~~~---------------------~-------------------------~~~~~~~~~~~li~~~l~~~p  255 (307)
T cd06607         224 YHIAQN--DSPT---------------------L-------------------------SSNDWSDYFRNFVDSCLQKIP  255 (307)
T ss_pred             HHHhcC--CCCC---------------------C-------------------------CchhhCHHHHHHHHHHhcCCh
Confidence            222110  0000                     0                         001235678999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~  394 (405)
                      ++|||+.+++.||||.....
T Consensus       256 ~~Rp~~~~il~~~~~~~~~~  275 (307)
T cd06607         256 QDRPSSEELLKHRFVLRERP  275 (307)
T ss_pred             hhCcCHHHHhcChhhcccCC
Confidence            99999999999999988653

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.1e-36  Score=282.92  Aligned_cols=230  Identities=28%  Similarity=0.430  Sum_probs=176.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..|++.+.||+|+||.||+|.+..+++.||+|+++..  ....+.+.+|+.+++.+.|+++....               
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            3577889999999999999999989999999998643  23345678899999999998873211               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||.|||++|++|+||+|+||+++.++.+                       
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~-----------------------  140 (277)
T cd06642          84 LGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDV-----------------------  140 (277)
T ss_pred             cCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCE-----------------------
Confidence                       1346788999999999999999999999999999999999876644                       


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                          +|+|||++......   .....|+..|+|||++.+..++.++|+|||||++|+|++|..||...........+...
T Consensus       141 ----~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~  216 (277)
T cd06642         141 ----KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN  216 (277)
T ss_pred             ----EEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC
Confidence                55555554432221   12245788999999999888999999999999999999999999765433322211000


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                        ..                                               .......+..+.++|.+||+.+|++|||+
T Consensus       217 --~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  247 (277)
T cd06642         217 --SP-----------------------------------------------PTLEGQYSKPFKEFVEACLNKDPRFRPTA  247 (277)
T ss_pred             --CC-----------------------------------------------CCCCcccCHHHHHHHHHHccCCcccCcCH
Confidence              00                                               00112345678999999999999999999


Q ss_pred             HHHHcCCCCCCCCCCCc
Q 015532          381 REALRHPFFTRDVRRPT  397 (405)
Q Consensus       381 ~elL~hp~f~~~~~~~~  397 (405)
                      .++++||||......++
T Consensus       248 ~~il~~~~~~~~~~~~~  264 (277)
T cd06642         248 KELLKHKFITRYTKKTS  264 (277)
T ss_pred             HHHHHhHHHHHHhhhHH
Confidence            99999999987655543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=5.6e-36  Score=290.05  Aligned_cols=219  Identities=22%  Similarity=0.328  Sum_probs=161.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~---------  154 (405)
                      ++|++.+.||+|+||.||+|++..+     ++.||||+++..  ....+.+.+|+++++.+ .|++++...         
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            4699999999999999999986543     357999999643  23345678899999999 788763211         


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus       118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (374)
T cd05106         118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS  197 (374)
T ss_pred             EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence                                                                                            


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|                      
T Consensus       198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~D----------------------  255 (374)
T cd05106         198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICD----------------------  255 (374)
T ss_pred             cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEee----------------------
Confidence                    01256778899999999999999999999999999999998766555555                      


Q ss_pred             ceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          227 IKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                           ||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||...........+...
T Consensus       256 -----fGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~  330 (374)
T cd05106         256 -----FGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR  330 (374)
T ss_pred             -----ceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHc
Confidence                 44443221111     11234567999999998899999999999999999997 99999765433322221110


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      ..                      ..                          ......++++.+++.+||+.||++|||+
T Consensus       331 ~~----------------------~~--------------------------~~~~~~~~~l~~li~~cl~~dp~~RPs~  362 (374)
T cd05106         331 GY----------------------QM--------------------------SRPDFAPPEIYSIMKMCWNLEPTERPTF  362 (374)
T ss_pred             cc----------------------Cc--------------------------cCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            00                      00                          0011235689999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      .++++
T Consensus       363 ~~l~~  367 (374)
T cd05106         363 SQISQ  367 (374)
T ss_pred             HHHHH
Confidence            99975

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.8e-35  Score=271.42  Aligned_cols=221  Identities=30%  Similarity=0.478  Sum_probs=174.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++++.||.|+||.||.+++..+++.|++|.+...   ......+.+|+++++++.|+++....               
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            599999999999999999999999999999987542   23345678899999999998873211               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.+                    
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~--------------------  140 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLI--------------------  140 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCE--------------------
Confidence                          1247888999999999999999999999999999999999876654                    


Q ss_pred             CCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                             ||+|||.+.......   ....|+..|+|||++.+..++.++|+|||||++|+|++|..||......+....+
T Consensus       141 -------kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~  213 (256)
T cd08221         141 -------KLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKI  213 (256)
T ss_pred             -------EECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence                   555555543322211   2346889999999998888899999999999999999999999876655544433


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ..  +..+                                               ......+..+.++|.+||..||++|
T Consensus       214 ~~--~~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~R  244 (256)
T cd08221         214 VQ--GNYT-----------------------------------------------PVVSVYSSELISLVHSLLQQDPEKR  244 (256)
T ss_pred             Hc--CCCC-----------------------------------------------CCccccCHHHHHHHHHHcccCcccC
Confidence            21  1100                                               0012345688999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||+.++|+|+|+
T Consensus       245 ~s~~~ll~~~~l  256 (256)
T cd08221         245 PTADEVLDQPLL  256 (256)
T ss_pred             CCHHHHhhCcCC
Confidence            999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=7.4e-36  Score=275.02  Aligned_cols=218  Identities=29%  Similarity=0.424  Sum_probs=169.5

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      ||.|+||.||+|++..+++.||+|++....    ...+.+.+|+.+++.+.|+++....                     
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            799999999999999999999999986432    3346678899999999999873311                     


Q ss_pred             ------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          155 ------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       155 ------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                            ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.                           ++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~---------------------------~~  133 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGY---------------------------VK  133 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCC---------------------------EE
Confidence                  134688899999999999999999999999999999999976654                           56


Q ss_pred             eccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCC
Q 015532          229 LIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE--NLEHLAMMERVLGPL  304 (405)
Q Consensus       229 l~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~--~~~~~~~i~~~~g~~  304 (405)
                      |+|||.+......  .....|+..|++||.+.+..++.++|+|||||++|+|++|..||....  ..+....+.....  
T Consensus       134 l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--  211 (262)
T cd05572         134 LVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG--  211 (262)
T ss_pred             EeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC--
Confidence            6666655443322  122467889999999988889999999999999999999999997765  2222222111000  


Q ss_pred             ChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC-----
Q 015532          305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK-----  379 (405)
Q Consensus       305 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt-----  379 (405)
                                          ..                          ..+...+.++.++|.+||+.||++|+|     
T Consensus       212 --------------------~~--------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~  245 (262)
T cd05572         212 --------------------KL--------------------------EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGG  245 (262)
T ss_pred             --------------------CC--------------------------CCCcccCHHHHHHHHHHccCChhhCcCCcccC
Confidence                                00                          111223568899999999999999999     


Q ss_pred             HHHHHcCCCCCCC
Q 015532          380 AREALRHPFFTRD  392 (405)
Q Consensus       380 a~elL~hp~f~~~  392 (405)
                      ++|+++||||+.-
T Consensus       246 ~~~l~~~~~~~~~  258 (262)
T cd05572         246 IKDIKKHKWFNGF  258 (262)
T ss_pred             HHHHhcChhhhCC
Confidence            9999999999974

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.6e-35  Score=271.69  Aligned_cols=222  Identities=29%  Similarity=0.479  Sum_probs=171.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +|+..+.||+|+||+||+|.+..+++.||+|.+....      ...+.+.+|+.+++.+.|+++....            
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            5788899999999999999998889999999986432      2345678899999999998873211            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.                    
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~--------------------  140 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGV--------------------  140 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--------------------
Confidence                           123678888999999999999999999999999999999976654                    


Q ss_pred             CCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                             ++|+|||.+......  .....|+..|++||.+.... ++.++|+|||||++|+|++|..||......+....
T Consensus       141 -------~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~  213 (258)
T cd06632         141 -------VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK  213 (258)
T ss_pred             -------EEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH
Confidence                   455555554432221  12346888999999998766 89999999999999999999999976554333222


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.... ..                                               ......+++.+.+|+.+||+.||++
T Consensus       214 ~~~~~-~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~  245 (258)
T cd06632         214 IGRSK-EL-----------------------------------------------PPIPDHLSDEAKDFILKCLQRDPSL  245 (258)
T ss_pred             HHhcc-cC-----------------------------------------------CCcCCCcCHHHHHHHHHHhhcCccc
Confidence            21100 00                                               0111234678899999999999999


Q ss_pred             CCCHHHHHcCCCC
Q 015532          377 RLKAREALRHPFF  389 (405)
Q Consensus       377 Rpta~elL~hp~f  389 (405)
                      |||+.+++.|||+
T Consensus       246 Rp~~~~~l~~~~~  258 (258)
T cd06632         246 RPTAAELLEHPFV  258 (258)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.1e-37  Score=293.41  Aligned_cols=226  Identities=27%  Similarity=0.437  Sum_probs=182.2

Q ss_pred             CCCe-EEEeeeecccceeEEEEEecCCCcEEEEEEec-----chhhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y-~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~-----~~~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++|| +...+||+|+|-+||+|.|..+|..||--.++     +.....+.+..|+.+|+.|.|+||+...          
T Consensus        38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~  117 (632)
T KOG0584|consen   38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT  117 (632)
T ss_pred             CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence            3455 44679999999999999999999888855443     2234457889999999999999995432          


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHC--CcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                         ++.++...++.+++||++||.|||++  -|||||||.+||+|+.                 
T Consensus       118 in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-----------------  180 (632)
T KOG0584|consen  118 INFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-----------------  180 (632)
T ss_pred             eeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-----------------
Confidence                               34567889999999999999999988  5999999999999964                 


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCcc-ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                               ..+.|||+|+|+|........ .++|||.|||||++. ..|+..+||||||..++||+|+.+||....+..
T Consensus       181 ---------~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A  250 (632)
T KOG0584|consen  181 ---------NLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA  250 (632)
T ss_pred             ---------CcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence                     456799999999987665543 368999999999998 589999999999999999999999998877655


Q ss_pred             HHHHHHHH-hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          293 HLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       293 ~~~~i~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      ++.+  ++ .|..|..+.                                              .-..+++++||.+||.
T Consensus       251 QIYK--KV~SGiKP~sl~----------------------------------------------kV~dPevr~fIekCl~  282 (632)
T KOG0584|consen  251 QIYK--KVTSGIKPAALS----------------------------------------------KVKDPEVREFIEKCLA  282 (632)
T ss_pred             HHHH--HHHcCCCHHHhh----------------------------------------------ccCCHHHHHHHHHHhc
Confidence            4432  22 233332221                                              0014689999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~  392 (405)
                      . .++|+||.|+|+||||..+
T Consensus       283 ~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  283 T-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             C-chhccCHHHHhhChhhccc
Confidence            9 9999999999999999986

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-35  Score=273.94  Aligned_cols=249  Identities=32%  Similarity=0.561  Sum_probs=183.0

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh--hhHHHHHHHHHHHHHh-hcCCCCC-----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA-RHDIGGT-----------------  153 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~-~~~~~~~-----------------  153 (405)
                      |++.+.||+|+||+||+|+...+++.||||.+.....  ......+|+..+.++. |+++...                 
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            6788999999999999999998999999999864322  2233456899999998 8766211                 


Q ss_pred             ---c--------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          154 ---R--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       154 ---~--------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                         .        ...+++..+..++.|++.+|.|||++|++|+||||+||+++.++.                       
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~-----------------------  137 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEV-----------------------  137 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCC-----------------------
Confidence               0        125688999999999999999999999999999999999976554                       


Q ss_pred             CCCCceeccCCCCccccCCc--cceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                          ++|+|||.+.......  ....++..|+|||++.+ ..++.++|+||||+++++|++|.+||......+....+..
T Consensus       138 ----~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~  213 (283)
T cd07830         138 ----VKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICS  213 (283)
T ss_pred             ----EEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHH
Confidence                5566666554333211  22467889999998854 4578999999999999999999999999888888888888


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .++.++............     .....++...               ...........+..+.+||.+||+.||++|||
T Consensus       214 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  273 (283)
T cd07830         214 VLGTPTKQDWPEGYKLAS-----KLGFRFPQFA---------------PTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT  273 (283)
T ss_pred             hcCCCChhhhhhHhhhhc-----cccccccccc---------------cccHHHHcccCCHHHHHHHHHhcccCcccCCC
Confidence            887766543322111000     0000000000               00001111223568999999999999999999


Q ss_pred             HHHHHcCCCC
Q 015532          380 AREALRHPFF  389 (405)
Q Consensus       380 a~elL~hp~f  389 (405)
                      ++|++.||||
T Consensus       274 ~~ei~~~~~~  283 (283)
T cd07830         274 ASQALQHPYF  283 (283)
T ss_pred             HHHHhhCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.5e-35  Score=271.82  Aligned_cols=218  Identities=27%  Similarity=0.417  Sum_probs=170.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      +|++.++||+|+||.||++.+..+++.||+|.++..  ....+.+..|+.+++.+.|+++....                
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            489999999999999999999999999999998532  23446677899999999999873211                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.                      
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~----------------------  138 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK----------------------  138 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCc----------------------
Confidence                         124678889999999999999999999999999999999976654                      


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                           ++++|||.+......   .....|+..|+|||++.+..++.++|+||||+++|+|++|..||...+.......+.
T Consensus       139 -----~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~  213 (255)
T cd08219         139 -----VKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC  213 (255)
T ss_pred             -----EEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh
Confidence                 555566655433221   123468889999999998889999999999999999999999998765544433322


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +.  ..+                                               .....++..+.+||.+||+.||++||
T Consensus       214 ~~--~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~P~~Rp  244 (255)
T cd08219         214 QG--SYK-----------------------------------------------PLPSHYSYELRSLIKQMFKRNPRSRP  244 (255)
T ss_pred             cC--CCC-----------------------------------------------CCCcccCHHHHHHHHHHHhCCcccCC
Confidence            11  000                                               00123456789999999999999999


Q ss_pred             CHHHHHcC
Q 015532          379 KAREALRH  386 (405)
Q Consensus       379 ta~elL~h  386 (405)
                      |+.++++-
T Consensus       245 ~~~~il~~  252 (255)
T cd08219         245 SATTILSR  252 (255)
T ss_pred             CHHHHhhc
Confidence            99999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7.4e-36  Score=278.53  Aligned_cols=239  Identities=24%  Similarity=0.360  Sum_probs=175.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.+.||+|+||+||++.+..+++.||+|++...  ....+.+.+|+++++.+.|+++....               
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            5699999999999999999999999999999988643  33456788999999999998873221               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                  ...+++..+..++.|++.||.|||+ +||+||||||+||+++.++                       
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-----------------------  141 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG-----------------------  141 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC-----------------------
Confidence                        1346788999999999999999996 6999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccC-CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                          .++|+|||++..... ......|+..|+|||++.+..++.++|||||||++|+|++|..||......+.....   
T Consensus       142 ----~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~---  214 (284)
T cd06620         142 ----QIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD---  214 (284)
T ss_pred             ----cEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh---
Confidence                456666665543211 122357899999999998888999999999999999999999999865432110000   


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                          +....        ..                  ...+.... .+..   .....+..+.+|+.+||+.||++|||+
T Consensus       215 ----~~~~~--------~~------------------~~~~~~~~-~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~  260 (284)
T cd06620         215 ----PMGIL--------DL------------------LQQIVQEP-PPRL---PSSDFPEDLRDFVDACLLKDPTERPTP  260 (284)
T ss_pred             ----hhHHH--------HH------------------HHHHhhcc-CCCC---CchhcCHHHHHHHHHHhcCCcccCcCH
Confidence                00000        00                  00000000 0000   001245678999999999999999999


Q ss_pred             HHHHcCCCCCCCCC
Q 015532          381 REALRHPFFTRDVR  394 (405)
Q Consensus       381 ~elL~hp~f~~~~~  394 (405)
                      .|+++|+||.+...
T Consensus       261 ~e~~~~~~~~~~~~  274 (284)
T cd06620         261 QQLCAMPPFIQALR  274 (284)
T ss_pred             HHHhcCcccccccc
Confidence            99999999987644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.2e-35  Score=276.61  Aligned_cols=221  Identities=26%  Similarity=0.374  Sum_probs=158.7

Q ss_pred             eeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH---hhcCCCCC------------------
Q 015532           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL---ARHDIGGT------------------  153 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l---~~~~~~~~------------------  153 (405)
                      .||+|+||.||++.+..+++.||+|++....    ........|..+++.+   .|+++...                  
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999999999999999986432    1122334455444444   34444210                  


Q ss_pred             ---c------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          154 ---R------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       154 ---~------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                         +      ...+++..+..++.|++.||.|||++||+||||||+|||++.++.                         
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~-------------------------  135 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGH-------------------------  135 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCC-------------------------
Confidence               0      134788999999999999999999999999999999999976654                         


Q ss_pred             CCceeccCCCCccccCC-ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          225 SAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                        ++|+|||++...... .....||..|+|||.+.+ ..++.++||||+||++|+|++|..||......... .+.+...
T Consensus       136 --~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~  212 (279)
T cd05633         136 --VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL  212 (279)
T ss_pred             --EEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhh
Confidence              455555555332211 122468999999999874 56899999999999999999999999754321111 0111000


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC----
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL----  378 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp----  378 (405)
                      .                                              .........+..+.++|.+||..||++|+    
T Consensus       213 ~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  246 (279)
T cd05633         213 T----------------------------------------------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLG  246 (279)
T ss_pred             c----------------------------------------------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCC
Confidence            0                                              00011233567899999999999999999    


Q ss_pred             -CHHHHHcCCCCCCCC
Q 015532          379 -KAREALRHPFFTRDV  393 (405)
Q Consensus       379 -ta~elL~hp~f~~~~  393 (405)
                       |++++++||||+...
T Consensus       247 ~~~~~~~~h~~~~~~~  262 (279)
T cd05633         247 RGAQEVKEHVFFKGID  262 (279)
T ss_pred             CCHHHHHhCccccCCC
Confidence             699999999998843

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.2e-35  Score=274.58  Aligned_cols=218  Identities=22%  Similarity=0.275  Sum_probs=166.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc----EEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+|++.++||+|+||+||+|++..+++    .||+|+++..  ......+.+|+.+++.+.|+++....           
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~   86 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV   86 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence            579999999999999999999876665    4899998642  23355677899999999998874210           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                   
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~-------------------  147 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNH-------------------  147 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc-------------------
Confidence                            134788899999999999999999999999999999999976554                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCcc-----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                              ++|+|||++........     ...++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus       148 --------~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  219 (279)
T cd05109         148 --------VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE  219 (279)
T ss_pred             --------EEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                    56666665544322111     1134568999999998889999999999999999998 999997765444


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+... ...                                                ......+.++.+++.+||..
T Consensus       220 ~~~~~~~~-~~~------------------------------------------------~~~~~~~~~~~~li~~~l~~  250 (279)
T cd05109         220 IPDLLEKG-ERL------------------------------------------------PQPPICTIDVYMIMVKCWMI  250 (279)
T ss_pred             HHHHHHCC-CcC------------------------------------------------CCCccCCHHHHHHHHHHcCC
Confidence            33222110 000                                                00123456889999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      ||++|||+.+++.
T Consensus       251 dp~~Rp~~~~l~~  263 (279)
T cd05109         251 DSECRPRFRELVD  263 (279)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999995

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.8e-35  Score=273.26  Aligned_cols=218  Identities=18%  Similarity=0.239  Sum_probs=167.1

Q ss_pred             CCeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+|++.+.||+|+||.||+|.++   ..+..||+|+++...  .....+.+|+.++..+.|+++....            
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            56999999999999999999875   346789999987542  3345678899999999999874311            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||            
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg------------  152 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFR------------  152 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCc------------
Confidence                            1357889999999999999999999999999999999999876655555555            


Q ss_pred             cCCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH  293 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~  293 (405)
                                     .+......    .....++..|+|||.+.+..++.++|||||||++|++++ |..||......+.
T Consensus       153 ---------------~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~  217 (266)
T cd05064         153 ---------------RLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV  217 (266)
T ss_pred             ---------------ccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence                           33221111    011234678999999999899999999999999999775 9999987766554


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+.+....                                                 ..+..++..+.+++.+||+.+
T Consensus       218 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~c~~~~  248 (266)
T cd05064         218 IKAVEDGFRL-------------------------------------------------PAPRNCPNLLHQLMLDCWQKE  248 (266)
T ss_pred             HHHHHCCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcCCC
Confidence            4433221100                                                 011234568899999999999


Q ss_pred             CCCCCCHHHHHc
Q 015532          374 PAERLKAREALR  385 (405)
Q Consensus       374 P~~Rpta~elL~  385 (405)
                      |++|||++++++
T Consensus       249 p~~RP~~~~i~~  260 (266)
T cd05064         249 RGERPRFSQIHS  260 (266)
T ss_pred             chhCCCHHHHHH
Confidence            999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.3e-35  Score=271.97  Aligned_cols=218  Identities=24%  Similarity=0.329  Sum_probs=167.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.++||+|+||.||+|++..++ .||+|+++......+.+.+|+++++.+.|+++....                
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   83 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence            367999999999999999999987664 599999976555556788999999999998873211                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+                      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~----------------------  141 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC----------------------  141 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcE----------------------
Confidence                        1235778899999999999999999999999999999999776644                      


Q ss_pred             CCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                           +|+|||.+.......    ....++..|+|||+..+..++.++|||||||++|+|++ |..||.+....+....+
T Consensus       142 -----~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~  216 (262)
T cd05071         142 -----KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV  216 (262)
T ss_pred             -----EeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Confidence                 555555544322111    11245678999999988889999999999999999999 89999876655444332


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .... ..                                                ......+..+.+|+.+||+.||++|
T Consensus       217 ~~~~-~~------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~R  247 (262)
T cd05071         217 ERGY-RM------------------------------------------------PCPPECPESLHDLMCQCWRKEPEER  247 (262)
T ss_pred             hcCC-CC------------------------------------------------CCccccCHHHHHHHHHHccCCcccC
Confidence            2110 00                                                0012345678999999999999999


Q ss_pred             CCHHHHHc
Q 015532          378 LKAREALR  385 (405)
Q Consensus       378 pta~elL~  385 (405)
                      ||+.++++
T Consensus       248 p~~~~~~~  255 (262)
T cd05071         248 PTFEYLQA  255 (262)
T ss_pred             CCHHHHHH
Confidence            99999886

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.9e-35  Score=272.04  Aligned_cols=219  Identities=24%  Similarity=0.343  Sum_probs=170.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..+.|++.++||+|+||.||+|... +++.||+|.+.......+.+.+|+.+++++.|+++....               
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   82 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYM   82 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcC
Confidence            3467999999999999999999865 567899999976665567788999999999998872211               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++.++..++.|++.||+|||++|++||||||+||+++.++.                      
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~----------------------  140 (260)
T cd05067          83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLC----------------------  140 (260)
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCC----------------------
Confidence                         124678888999999999999999999999999999999987664                      


Q ss_pred             CCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                           ++|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....
T Consensus       141 -----~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  215 (260)
T cd05067         141 -----CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN  215 (260)
T ss_pred             -----EEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH
Confidence                 4555555554332111    11245678999999988889999999999999999999 9999987766554443


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+....                                                 ......+.++.+++.+||..||++
T Consensus       216 ~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  246 (260)
T cd05067         216 LERGYRM-------------------------------------------------PRPDNCPEELYELMRLCWKEKPEE  246 (260)
T ss_pred             HHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHccCChhh
Confidence            3221100                                                 011234568999999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      |||++++++
T Consensus       247 Rp~~~~l~~  255 (260)
T cd05067         247 RPTFEYLRS  255 (260)
T ss_pred             CCCHHHHHH
Confidence            999999986

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=3.3e-35  Score=271.71  Aligned_cols=221  Identities=24%  Similarity=0.397  Sum_probs=165.0

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------------------
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------------------  154 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------------------  154 (405)
                      ....||+|+||.||+|++..++..||+|.+.... ...+.+.+|+.+++.+.|+++....                    
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   91 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS   91 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCC
Confidence            3468999999999999999999999999886433 3445678899999999999874321                    


Q ss_pred             --------cccC--CHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 --------YRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 --------~~~l--~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                              ...+  ++..+..++.||+.||.|||++||+||||||+||+++..                          .
T Consensus        92 L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~--------------------------~  145 (268)
T cd06624          92 LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY--------------------------S  145 (268)
T ss_pred             HHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--------------------------C
Confidence                    1223  667788899999999999999999999999999999642                          2


Q ss_pred             CCceeccCCCCccccCC---ccceecCCCcchhHHHhCCC--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          225 SAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                      ..++|+|||.+......   .....|+..|+|||++.+..  ++.++|+||||+++|+|++|..||..............
T Consensus       146 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~  225 (268)
T cd06624         146 GVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG  225 (268)
T ss_pred             CeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh
Confidence            24667777766443211   12245788999999987643  78999999999999999999999965432211100000


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ...                                               .........++++.+|+.+||..+|++|||
T Consensus       226 ~~~-----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  258 (268)
T cd06624         226 MFK-----------------------------------------------IHPEIPESLSAEAKNFILRCFEPDPDKRAS  258 (268)
T ss_pred             hhc-----------------------------------------------cCCCCCcccCHHHHHHHHHHcCCCchhCCC
Confidence            000                                               000111234668999999999999999999


Q ss_pred             HHHHHcCCCC
Q 015532          380 AREALRHPFF  389 (405)
Q Consensus       380 a~elL~hp~f  389 (405)
                      +.|++.||||
T Consensus       259 ~~~ll~~~~~  268 (268)
T cd06624         259 AHDLLQDPFL  268 (268)
T ss_pred             HHHHHhCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=3e-35  Score=273.48  Aligned_cols=222  Identities=20%  Similarity=0.300  Sum_probs=171.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++|++.+.||+|+||.||+|.+..     ++..||+|.+...  ......+..|+.+++.+.|+++....          
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF   85 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence            569999999999999999999977     6788999988643  22345688899999999998763211          


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++..+..++.||+.||.|||++|++||||||+||+++.++            
T Consensus        86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~------------  153 (277)
T cd05036          86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG------------  153 (277)
T ss_pred             EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC------------
Confidence                                    01477888999999999999999999999999999999997643            


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCcc-----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  284 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~p  284 (405)
                                  ....++|+|||++........     ....+..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       154 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~p  221 (277)
T cd05036         154 ------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMP  221 (277)
T ss_pred             ------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCC
Confidence                        223467888887765422211     1223567999999998889999999999999999997 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       285 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      |.+.+..+....+....                       ...                          .....+..+.+
T Consensus       222 f~~~~~~~~~~~~~~~~-----------------------~~~--------------------------~~~~~~~~~~~  252 (277)
T cd05036         222 YPGRTNQEVMEFVTGGG-----------------------RLD--------------------------PPKGCPGPVYR  252 (277)
T ss_pred             CCCCCHHHHHHHHHcCC-----------------------cCC--------------------------CCCCCCHHHHH
Confidence            98766554433221100                       000                          11234568899


Q ss_pred             HHHHccccCCCCCCCHHHHHcC
Q 015532          365 LLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ++.+||+.||++|||+.++++|
T Consensus       253 ~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         253 IMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.6e-35  Score=272.49  Aligned_cols=218  Identities=23%  Similarity=0.343  Sum_probs=168.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.++||+|+||.||+|.+. ++..||+|.++......+.+.+|+.+++++.|+++....                
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMS   83 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecC
Confidence            467999999999999999999875 556699999976555566788999999999998862110                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.|++.||.|||++||+||||||+||+++.++.+                      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~----------------------  141 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVC----------------------  141 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceE----------------------
Confidence                        1246888899999999999999999999999999999999876654                      


Q ss_pred             CCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                           +|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+..+....+
T Consensus       142 -----~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~  216 (260)
T cd05070         142 -----KIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV  216 (260)
T ss_pred             -----EeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence                 455555543322111    11234567999999988889999999999999999999 99999876655544433


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .... .                                                .......+..+.+|+.+||..||++|
T Consensus       217 ~~~~-~------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05070         217 ERGY-R------------------------------------------------MPCPQDCPISLHELMLQCWKKDPEER  247 (260)
T ss_pred             HcCC-C------------------------------------------------CCCCCcCCHHHHHHHHHHcccCcccC
Confidence            2110 0                                                00112345689999999999999999


Q ss_pred             CCHHHHHc
Q 015532          378 LKAREALR  385 (405)
Q Consensus       378 pta~elL~  385 (405)
                      ||+.++++
T Consensus       248 pt~~~l~~  255 (260)
T cd05070         248 PTFEYLQS  255 (260)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.5e-35  Score=287.34  Aligned_cols=220  Identities=25%  Similarity=0.378  Sum_probs=163.0

Q ss_pred             CCeEEEeeeecccceeEEEEEe-----cCCCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~-----~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~---------  154 (405)
                      ++|++.++||+|+||.||+|++     ..++..||||+++...  ...+.+.+|+.++..+ .|+++....         
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~  114 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT  114 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence            4799999999999999999974     3456789999986432  3345678899999999 788773211         


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus       115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (375)
T cd05104         115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY  194 (375)
T ss_pred             eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence                                                                                            


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                      
T Consensus       195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~----------------------  252 (375)
T cd05104         195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRI----------------------  252 (375)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCc----------------------
Confidence                         013567788899999999999999999999999999999986654                      


Q ss_pred             CCCCCceeccCCCCccccCCcc-----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  295 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~  295 (405)
                           ++|+|||++........     ...++..|+|||++.+..++.++|||||||++|+|++ |..||........+.
T Consensus       253 -----~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~  327 (375)
T cd05104         253 -----TKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFY  327 (375)
T ss_pred             -----EEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHH
Confidence                 45555555543221111     1234567999999999899999999999999999998 899997654433222


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+...                      +.+.                          ..+...+.++.+||.+||+.||+
T Consensus       328 ~~~~~----------------------~~~~--------------------------~~~~~~~~~l~~li~~cl~~dP~  359 (375)
T cd05104         328 KMIKE----------------------GYRM--------------------------LSPECAPSEMYDIMKSCWDADPL  359 (375)
T ss_pred             HHHHh----------------------CccC--------------------------CCCCCCCHHHHHHHHHHccCChh
Confidence            11110                      0000                          00112356889999999999999


Q ss_pred             CCCCHHHHHcC
Q 015532          376 ERLKAREALRH  386 (405)
Q Consensus       376 ~Rpta~elL~h  386 (405)
                      +|||+.|+++.
T Consensus       360 ~RPs~~eil~~  370 (375)
T cd05104         360 KRPTFKQIVQL  370 (375)
T ss_pred             HCcCHHHHHHH
Confidence            99999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-35  Score=275.33  Aligned_cols=231  Identities=25%  Similarity=0.423  Sum_probs=174.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHh---hcCCCCCc-------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA---RHDIGGTR-------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~---~~~~~~~~-------------  154 (405)
                      .|++.+.||+|+||.||+|.+..+++.||+|+++..  ....+.+.+|+.+++.+.   |+++....             
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            488899999999999999999999999999998643  233456778999999997   77652210             


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.|++.||.|||+.||+|+||+|+||+++..+.                      
T Consensus        82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~----------------------  139 (277)
T cd06917          82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN----------------------  139 (277)
T ss_pred             ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC----------------------
Confidence                         135678899999999999999999999999999999999987654                      


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           ++|+|||.+......   .....|+..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.........+
T Consensus       140 -----~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~  214 (277)
T cd06917         140 -----VKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI  214 (277)
T ss_pred             -----EEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc
Confidence                 555566555433221   1224688899999998754 5789999999999999999999999765443222111


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ...   .+                                          +..   .....+.++.+++.+||+.||++|
T Consensus       215 ~~~---~~------------------------------------------~~~---~~~~~~~~~~~~i~~~l~~~p~~R  246 (277)
T cd06917         215 PKS---KP------------------------------------------PRL---EDNGYSKLLREFVAACLDEEPKER  246 (277)
T ss_pred             ccC---CC------------------------------------------CCC---CcccCCHHHHHHHHHHcCCCcccC
Confidence            000   00                                          000   001245688999999999999999


Q ss_pred             CCHHHHHcCCCCCCCCCCCcc
Q 015532          378 LKAREALRHPFFTRDVRRPTL  398 (405)
Q Consensus       378 pta~elL~hp~f~~~~~~~~~  398 (405)
                      ||+.++++|+||++....+..
T Consensus       247 ~~~~~il~~~~~~~~~~~~~~  267 (277)
T cd06917         247 LSAEELLKSKWIKAHSKTPVS  267 (277)
T ss_pred             cCHHHHhhChHhhccccCchh
Confidence            999999999999887665543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.4e-35  Score=271.53  Aligned_cols=227  Identities=24%  Similarity=0.432  Sum_probs=176.0

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .|++.+.||+|++|.||+|++..+++.||||++....  .....+..|+.++..+.|+++....                
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            5899999999999999999999999999999986543  3456788999999999998873211                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                 ...+++..+..++.||+.||.|||+ +|++|+||+|+||+++.++.                       
T Consensus        82 ~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~-----------------------  138 (264)
T cd06623          82 DGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGE-----------------------  138 (264)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCC-----------------------
Confidence                       1457888999999999999999999 99999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                          ++|+|||.+.......   ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...........+..
T Consensus       139 ----~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  214 (264)
T cd06623         139 ----VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA  214 (264)
T ss_pred             ----EEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH
Confidence                5555665554332211   134678899999999988899999999999999999999999977642111111111


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC-chHHHHHHHHHccccCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ......                                              ...... ++..+.++|.+||..+|++||
T Consensus       215 ~~~~~~----------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~  248 (264)
T cd06623         215 ICDGPP----------------------------------------------PSLPAEEFSPEFRDFISACLQKDPKKRP  248 (264)
T ss_pred             HhcCCC----------------------------------------------CCCCcccCCHHHHHHHHHHccCChhhCC
Confidence            110000                                              001112 467899999999999999999


Q ss_pred             CHHHHHcCCCCCCC
Q 015532          379 KAREALRHPFFTRD  392 (405)
Q Consensus       379 ta~elL~hp~f~~~  392 (405)
                      |+.|+++||||+.-
T Consensus       249 ~~~~ll~~~~~~~~  262 (264)
T cd06623         249 SAAELLQHPFIKKA  262 (264)
T ss_pred             CHHHHHhCHHHHhc
Confidence            99999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=2.5e-35  Score=271.34  Aligned_cols=217  Identities=20%  Similarity=0.338  Sum_probs=167.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||.||+|.+. ++..||+|.+.......+.+..|+.+++.+.|+++....                 
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            56999999999999999999975 556799999876555567788999999999999873211                 


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.|++.||.|||++|++||||||+||+++.++.+                      
T Consensus        85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~----------------------  142 (261)
T cd05072          85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMC----------------------  142 (261)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcE----------------------
Confidence                        1235677888899999999999999999999999999999876654                      


Q ss_pred             CCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                           +|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+
T Consensus       143 -----~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~  217 (261)
T cd05072         143 -----KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL  217 (261)
T ss_pred             -----EECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence                 555555544332211    11235678999999988889999999999999999998 99999876655544333


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+...                                                 .......+.++.+++.+||..||++|
T Consensus       218 ~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  248 (261)
T cd05072         218 QRGYR-------------------------------------------------MPRMENCPDELYDIMKTCWKEKAEER  248 (261)
T ss_pred             HcCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHccCCcccC
Confidence            22100                                                 00112345688999999999999999


Q ss_pred             CCHHHHHc
Q 015532          378 LKAREALR  385 (405)
Q Consensus       378 pta~elL~  385 (405)
                      ||++++++
T Consensus       249 p~~~~i~~  256 (261)
T cd05072         249 PTFDYLQS  256 (261)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.6e-35  Score=275.33  Aligned_cols=220  Identities=26%  Similarity=0.410  Sum_probs=166.4

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      ||+|+||+||+|.+..+++.||+|++....    .....+..|+++++.+.|+++....                     
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            699999999999999999999999986422    2234556899999999998763211                     


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..+..++.|++.||.|||++||+||||+|+||+++.++.                           
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~---------------------------  133 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGN---------------------------  133 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC---------------------------
Confidence                    125788899999999999999999999999999999999976654                           


Q ss_pred             ceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 015532          227 IKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL  304 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~  304 (405)
                      ++|+|||.+......  .....++..|+|||++.+..++.++|||||||++|+|++|..||...........+.+..-  
T Consensus       134 ~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--  211 (277)
T cd05577         134 VRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL--  211 (277)
T ss_pred             EEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc--
Confidence            455555555432211  1223577889999999888899999999999999999999999976543211111111000  


Q ss_pred             ChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC-----C
Q 015532          305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-----K  379 (405)
Q Consensus       305 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp-----t  379 (405)
                                                                  ..........++.+.++|.+||+.||++||     +
T Consensus       212 --------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  247 (277)
T cd05577         212 --------------------------------------------EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGS  247 (277)
T ss_pred             --------------------------------------------cccccCCccCCHHHHHHHHHHccCChhHccCCCccc
Confidence                                                        000011233467899999999999999999     9


Q ss_pred             HHHHHcCCCCCCC
Q 015532          380 AREALRHPFFTRD  392 (405)
Q Consensus       380 a~elL~hp~f~~~  392 (405)
                      +.++++||||..-
T Consensus       248 ~~~ll~h~~~~~~  260 (277)
T cd05577         248 ADEVREHPLFKDL  260 (277)
T ss_pred             HHHHHhChhhhcC
Confidence            9999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.7e-35  Score=275.05  Aligned_cols=230  Identities=26%  Similarity=0.409  Sum_probs=177.4

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      -|++.++||+|+||.||+|.+..+++.||||++....  .....+.+|+.++..+.|+++....                
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            3788899999999999999998899999999985432  3345677899999999999863211                


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.                         
T Consensus        85 ~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~-------------------------  139 (277)
T cd06641          85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE-------------------------  139 (277)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCC-------------------------
Confidence                      134678899999999999999999999999999999999976664                         


Q ss_pred             CCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          225 SAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                        ++|+|||++......   .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+... 
T Consensus       140 --~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-  216 (277)
T cd06641         140 --VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-  216 (277)
T ss_pred             --EEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-
Confidence              455555554332211   12246788999999998888899999999999999999999999765543333222110 


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                       ..                                               ......++.++.+++.+||+.||++||++.
T Consensus       217 -~~-----------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  248 (277)
T cd06641         217 -NP-----------------------------------------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAK  248 (277)
T ss_pred             -CC-----------------------------------------------CCCCcccCHHHHHHHHHHccCChhhCcCHH
Confidence             00                                               001123456889999999999999999999


Q ss_pred             HHHcCCCCCCCCCCCcc
Q 015532          382 EALRHPFFTRDVRRPTL  398 (405)
Q Consensus       382 elL~hp~f~~~~~~~~~  398 (405)
                      ++++||||.+....++.
T Consensus       249 ~~l~~~~~~~~~~~~~~  265 (277)
T cd06641         249 ELLKHKFIVRFAKKTSY  265 (277)
T ss_pred             HHHhCHHHhhhhhccch
Confidence            99999999987665543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-35  Score=269.36  Aligned_cols=222  Identities=28%  Similarity=0.443  Sum_probs=170.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch------hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+|++.+.||+|+||.||+|++..+++.||+|++...      ......+.+|+++++.+.|+++....           
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            3699999999999999999999999999999987421      12335677899999999998873211           


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++++|||          
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg----------  151 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG----------  151 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccc----------
Confidence                              1236778889999999999999999999999999999999876655555555          


Q ss_pred             cccCCCCCCCceeccCCCCccccC------CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                       ++.....      ......|+..|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus       152 -----------------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  214 (264)
T cd06653         152 -----------------ASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA  214 (264)
T ss_pred             -----------------cccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH
Confidence                             4432211      11224688899999999988899999999999999999999999976544


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      ......+..  .+.+                                              ...+...++.+.++|.+||
T Consensus       215 ~~~~~~~~~--~~~~----------------------------------------------~~~p~~~~~~~~~~i~~~l  246 (264)
T cd06653         215 MAAIFKIAT--QPTK----------------------------------------------PMLPDGVSDACRDFLKQIF  246 (264)
T ss_pred             HHHHHHHHc--CCCC----------------------------------------------CCCCcccCHHHHHHHHHHh
Confidence            433322211  0000                                              0112345678999999999


Q ss_pred             ccCCCCCCCHHHHHcCCCC
Q 015532          371 RYDPAERLKAREALRHPFF  389 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f  389 (405)
                      + +|.+|||+.+++.|||.
T Consensus       247 ~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         247 V-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             c-CcccCccHHHHhcCCCC
Confidence            9 57999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.1e-35  Score=275.16  Aligned_cols=219  Identities=22%  Similarity=0.299  Sum_probs=168.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC-----cEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~-----~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      +.|++.+.||+|+||.||+|.+...+     +.||+|.++...  .....+.+|+.++..+.|+++....          
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            46899999999999999999976554     689999986432  3345678899999999998873211          


Q ss_pred             ---------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          155 ---------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       155 ---------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                                                       ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+ 
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~-  163 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTV-  163 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcE-
Confidence                                             0335677888999999999999999999999999999999876654 


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHH
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  276 (405)
                                                +|+|||++......     .....+++.|+|||.+.+..++.++|||||||++|
T Consensus       164 --------------------------~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~  217 (283)
T cd05048         164 --------------------------KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLW  217 (283)
T ss_pred             --------------------------EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHH
Confidence                                      55555554332111     11235678899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcc
Q 015532          277 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  355 (405)
Q Consensus       277 ~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
                      ||++ |..||.+....+....+....  .                                               ....
T Consensus       218 el~~~g~~p~~~~~~~~~~~~i~~~~--~-----------------------------------------------~~~~  248 (283)
T cd05048         218 EIFSYGLQPYYGFSNQEVIEMIRSRQ--L-----------------------------------------------LPCP  248 (283)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCC--c-----------------------------------------------CCCc
Confidence            9998 999998876655444332110  0                                               0112


Q ss_pred             cCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ..++.++.+|+.+||+.||++|||+.|++++
T Consensus       249 ~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         249 EDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3456789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2.8e-35  Score=274.57  Aligned_cols=211  Identities=14%  Similarity=0.134  Sum_probs=163.6

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhhh----hHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      ..||+|++|.||+|..  +|+.||||+++.....    .+.+.+|+.+|.++.|+++....                   
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            4799999999999997  5889999999754332    35667999999999999873211                   


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                  ...+++.....++.|++.||.|||+ .+++||||||+|||++.++.                      
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~----------------------  161 (283)
T PHA02988        104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYK----------------------  161 (283)
T ss_pred             CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCc----------------------
Confidence                        1346777889999999999999998 59999999999999976554                      


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                           +||+|||++...........|+..|+|||++.+  ..++.++|||||||++|||++|..||.+.+..+....+..
T Consensus       162 -----~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~  236 (283)
T PHA02988        162 -----LKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN  236 (283)
T ss_pred             -----EEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence                 566666665543333334468899999999976  5799999999999999999999999988766554443322


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ....+                      .                          .....++.+.+|+.+||+.||++|||
T Consensus       237 ~~~~~----------------------~--------------------------~~~~~~~~l~~li~~cl~~dp~~Rps  268 (283)
T PHA02988        237 KNNSL----------------------K--------------------------LPLDCPLEIKCIVEACTSHDSIKRPN  268 (283)
T ss_pred             cCCCC----------------------C--------------------------CCCcCcHHHHHHHHHHhcCCcccCcC
Confidence            11100                      0                          11134668999999999999999999


Q ss_pred             HHHHHc
Q 015532          380 AREALR  385 (405)
Q Consensus       380 a~elL~  385 (405)
                      ++|+++
T Consensus       269 ~~ell~  274 (283)
T PHA02988        269 IKEILY  274 (283)
T ss_pred             HHHHHH
Confidence            999985

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=4e-35  Score=271.54  Aligned_cols=216  Identities=19%  Similarity=0.276  Sum_probs=163.0

Q ss_pred             EEEeeeecccceeEEEEEecCCCc--EEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           95 RILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~~~~~--~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .+.++||+|+||.||+|++..++.  .||+|.++..   ....+.+..|+.+++.++|+++....               
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            467899999999999999877765  6999988643   23356678899999999998874311               


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++..+..++.||+.||.|||++||+||||||+|||++.++.           
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-----------  150 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMN-----------  150 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCC-----------
Confidence                                    012567888999999999999999999999999999999976654           


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  284 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~p  284 (405)
                                      ++|+|||++.......     ....+++.|+|||.+.+..++.++|||||||++|+|++ |+.|
T Consensus       151 ----------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p  214 (272)
T cd05075         151 ----------------VCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP  214 (272)
T ss_pred             ----------------EEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence                            4555555554332211     11245678999999998889999999999999999999 8999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       285 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      |.+....+....+...  .                     ..                          ......+..+.+
T Consensus       215 ~~~~~~~~~~~~~~~~--~---------------------~~--------------------------~~~~~~~~~~~~  245 (272)
T cd05075         215 YPGVENSEIYDYLRQG--N---------------------RL--------------------------KQPPDCLDGLYS  245 (272)
T ss_pred             CCCCCHHHHHHHHHcC--C---------------------CC--------------------------CCCCCCCHHHHH
Confidence            9876654433322210  0                     00                          011234567899


Q ss_pred             HHHHccccCCCCCCCHHHHHcC
Q 015532          365 LLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      +|.+||+.||++|||+.+++++
T Consensus       246 li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         246 LMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.5e-35  Score=275.18  Aligned_cols=237  Identities=27%  Similarity=0.436  Sum_probs=183.2

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +...+.|++.+.||+|+||.||+|.+..+++.||+|+++......+.+..|+++++.+.|+++....             
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            3456779999999999999999999998899999999976544456788899999999998763211             


Q ss_pred             --------------cc-cCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 --------------YR-SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 --------------~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                    .. .+++..+..++.|++.||.|||+.||+|+||||+||+++.++.+++                 
T Consensus        95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l-----------------  157 (286)
T cd06614          95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKL-----------------  157 (286)
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEE-----------------
Confidence                          11 6788899999999999999999999999999999999987665544                 


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                                +|||.+......   .....++..|++||++.+..++.++|+|||||++|+|++|..||...........
T Consensus       158 ----------~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~  227 (286)
T cd06614         158 ----------ADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFL  227 (286)
T ss_pred             ----------CccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                      455443322111   1223578899999999888899999999999999999999999987655443332


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +...  ..+.                                             ......++..+.+||.+||+.+|.+
T Consensus       228 ~~~~--~~~~---------------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~  260 (286)
T cd06614         228 ITTK--GIPP---------------------------------------------LKNPEKWSPEFKDFLNKCLVKDPEK  260 (286)
T ss_pred             HHhc--CCCC---------------------------------------------CcchhhCCHHHHHHHHHHhccChhh
Confidence            2110  0000                                             0001124568899999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCCCCcc
Q 015532          377 RLKAREALRHPFFTRDVRRPTL  398 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~~~~~  398 (405)
                      |||+.++++|+||++...++.+
T Consensus       261 Rpt~~~il~~~~~~~~~~~~~~  282 (286)
T cd06614         261 RPSAEELLQHPFLKKACPKEEF  282 (286)
T ss_pred             CcCHHHHhhChHhhccCchHhh
Confidence            9999999999999996665543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-35  Score=267.02  Aligned_cols=221  Identities=31%  Similarity=0.472  Sum_probs=174.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||+|++|.||++++..+++.||+|.+....   ...+.+.+|++++.++.|+++....               
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            5899999999999999999999899999999996544   3456788999999999998763211               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.|++.||.|||++||+||||||+||+++.++.                       
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~-----------------------  137 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGV-----------------------  137 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCC-----------------------
Confidence                        135788899999999999999999999999999999999976554                       


Q ss_pred             CCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                          ++|+|||.+.......   ....++..|+|||.+.+..++.++||||||+++|+|++|..||...........+..
T Consensus       138 ----~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~  213 (254)
T cd06627         138 ----VKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ  213 (254)
T ss_pred             ----EEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence                5555665554433222   224678899999999887889999999999999999999999976554333222211


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                        ...                                               .......+..+.+++.+||..+|++|||
T Consensus       214 --~~~-----------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~  244 (254)
T cd06627         214 --DDH-----------------------------------------------PPLPEGISPELKDFLMQCFQKDPNLRPT  244 (254)
T ss_pred             --cCC-----------------------------------------------CCCCCCCCHHHHHHHHHHHhCChhhCcC
Confidence              000                                               0111234668899999999999999999


Q ss_pred             HHHHHcCCCC
Q 015532          380 AREALRHPFF  389 (405)
Q Consensus       380 a~elL~hp~f  389 (405)
                      +.+++.||||
T Consensus       245 ~~~~l~~~~~  254 (254)
T cd06627         245 AKQLLKHPWI  254 (254)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=7.9e-35  Score=266.64  Aligned_cols=221  Identities=30%  Similarity=0.513  Sum_probs=174.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.+.||.|+||.||++.+..+++.||+|++....   .....+..|+++++.+.|+++....               
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            5899999999999999999999899999999986532   3456678899999999998863211               


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.                   
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~-------------------  141 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGL-------------------  141 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCc-------------------
Confidence                            145788899999999999999999999999999999999976654                   


Q ss_pred             cCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              ++|+|||.+......   .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+..+...
T Consensus       142 --------~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~  213 (258)
T cd08215         142 --------VKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELAL  213 (258)
T ss_pred             --------EEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHH
Confidence                    455555555433222   122468889999999988889999999999999999999999997765444333


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.+..  .                                               .......+..+.+++.+||..||+
T Consensus       214 ~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~  244 (258)
T cd08215         214 KILKGQ--Y-----------------------------------------------PPIPSQYSSELRNLVSSLLQKDPE  244 (258)
T ss_pred             HHhcCC--C-----------------------------------------------CCCCCCCCHHHHHHHHHHcCCChh
Confidence            221110  0                                               001123456889999999999999


Q ss_pred             CCCCHHHHHcCCCC
Q 015532          376 ERLKAREALRHPFF  389 (405)
Q Consensus       376 ~Rpta~elL~hp~f  389 (405)
                      +|||+.++|+||||
T Consensus       245 ~Rp~~~~ll~~~~~  258 (258)
T cd08215         245 ERPSIAQILQSPFI  258 (258)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.1e-35  Score=274.63  Aligned_cols=218  Identities=20%  Similarity=0.318  Sum_probs=167.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      +.|.+.+.||+|+||.||+|.+..     +++.||||+++....  ..+.+.+|+++++.+.|+++....          
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            468999999999999999998753     357899999865432  356788999999999998863211          


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++++
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~  164 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG  164 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence                                           1235778889999999999999999999999999999999876655555


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                      ||                           |++......     .....++..|+|||++.+..++.++|||||||++|+|
T Consensus       165 d~---------------------------g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~  217 (280)
T cd05049         165 DF---------------------------GMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEI  217 (280)
T ss_pred             Cc---------------------------ccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHH
Confidence            55                           444322111     1122456789999999998999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC
Q 015532          279 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  357 (405)
Q Consensus       279 lt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (405)
                      ++ |..||.+.+..+....+.+....                                                 .....
T Consensus       218 ~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~  248 (280)
T cd05049         218 FTYGKQPWYGLSNEEVIECITQGRLL-------------------------------------------------QRPRT  248 (280)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------CCCCC
Confidence            98 99999877665544433211000                                                 00123


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          358 SAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       358 ~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .+..+.+|+.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         249 CPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            4668999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.9e-35  Score=275.81  Aligned_cols=228  Identities=26%  Similarity=0.415  Sum_probs=175.4

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      |....+||+|+||.||++....+++.||||.+.... .....+.+|+.+++.+.|+++....                  
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  101 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  101 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence            444578999999999999999999999999985422 3455678899999999998863221                  


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.+                          
T Consensus       102 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~--------------------------  155 (292)
T cd06657         102 GALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRV--------------------------  155 (292)
T ss_pred             CcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCE--------------------------
Confidence                    1346888999999999999999999999999999999999876655                          


Q ss_pred             ceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 015532          227 IKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP  303 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~  303 (405)
                       +|+|||.+......   .....|+..|+|||.+.+..++.++|+||+||++|+|++|..||.+....+....+..... 
T Consensus       156 -~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-  233 (292)
T cd06657         156 -KLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-  233 (292)
T ss_pred             -EEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-
Confidence             45555544322111   1224688899999999888889999999999999999999999987665544433322110 


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHH
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA  383 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el  383 (405)
                        .                                            ........+..+.+++.+||+.||.+||++.++
T Consensus       234 --~--------------------------------------------~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~l  267 (292)
T cd06657         234 --P--------------------------------------------KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL  267 (292)
T ss_pred             --c--------------------------------------------ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHH
Confidence              0                                            000112345678899999999999999999999


Q ss_pred             HcCCCCCCCCCC
Q 015532          384 LRHPFFTRDVRR  395 (405)
Q Consensus       384 L~hp~f~~~~~~  395 (405)
                      ++||||......
T Consensus       268 l~~~~~~~~~~~  279 (292)
T cd06657         268 LKHPFLAKAGPP  279 (292)
T ss_pred             hcChHHhccCCC
Confidence            999999987653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=4.1e-35  Score=302.31  Aligned_cols=241  Identities=21%  Similarity=0.259  Sum_probs=171.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.++||+|+||.||+|++..+++.||||+++..    ....+.+.+|+++++.+.|+++....             
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5799999999999999999999999999999998642    23456788999999999999874321             


Q ss_pred             -------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          155 -------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 -------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                               ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++++|||++.
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence                                     0112345667889999999999999999999999999999998888888888775


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                      .........      .......-+............+||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus       162 ~i~~~~~~~------~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~  235 (932)
T PRK13184        162 FKKLEEEDL------LDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK  235 (932)
T ss_pred             ecccccccc------cccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence            442211100      00000000000000011123579999999999999999999999999999999999999997644


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      .......  ..... |.                                            .......+++.+.+++.+|
T Consensus       236 ~~ki~~~--~~i~~-P~--------------------------------------------~~~p~~~iP~~L~~LI~rc  268 (932)
T PRK13184        236 GRKISYR--DVILS-PI--------------------------------------------EVAPYREIPPFLSQIAMKA  268 (932)
T ss_pred             hhhhhhh--hhccC-hh--------------------------------------------hccccccCCHHHHHHHHHH
Confidence            3222111  00000 00                                            0000123466889999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |+.||++|++..+.+.
T Consensus       269 L~~DP~kR~ss~eeLl  284 (932)
T PRK13184        269 LAVDPAERYSSVQELK  284 (932)
T ss_pred             ccCChhhCcCHHHHHH
Confidence            9999999987655553

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=4.4e-35  Score=277.25  Aligned_cols=229  Identities=25%  Similarity=0.371  Sum_probs=176.0

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..+.|...++||+|+||+||+|++..+++.||+|++....    .....+..|+++++.+.|+++....           
T Consensus        19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   98 (313)
T cd06633          19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWL   98 (313)
T ss_pred             HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            3345888899999999999999999999999999986422    2234567899999999998873211           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++.++..++.||+.||.|||++||+|+||||+||+++.++.                   
T Consensus        99 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~-------------------  159 (313)
T cd06633          99 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ-------------------  159 (313)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCC-------------------
Confidence                            234678889999999999999999999999999999999976554                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              ++|+|||.+..... .....|+..|+|||++.   +..++.++|||||||++|+|++|..||...+......
T Consensus       160 --------~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~  230 (313)
T cd06633         160 --------VKLADFGSASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY  230 (313)
T ss_pred             --------EEEeecCCCcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                    56666665543222 22346888999999985   3458889999999999999999999998766544443


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+...  ..|.                                              .....++..+.+|+.+||+.+|+
T Consensus       231 ~~~~~--~~~~----------------------------------------------~~~~~~~~~l~~li~~~l~~~P~  262 (313)
T cd06633         231 HIAQN--DSPT----------------------------------------------LQSNEWTDSFRGFVDYCLQKIPQ  262 (313)
T ss_pred             HHHhc--CCCC----------------------------------------------CCccccCHHHHHHHHHHccCChh
Confidence            33211  0000                                              00122345789999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~  394 (405)
                      +||++.++++||||+....
T Consensus       263 ~Rp~~~~~l~~~~~~~~~~  281 (313)
T cd06633         263 ERPASAELLRHDFVRRDRP  281 (313)
T ss_pred             hCcCHHHHhcCcccCCCch
Confidence            9999999999999998543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=5.4e-35  Score=269.94  Aligned_cols=219  Identities=27%  Similarity=0.417  Sum_probs=167.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||||.++..    ......+..|+.+++.+.|+++....             
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4699999999999999999999999999999987532    23345678899999999999873211             


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.                 
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~-----------------  144 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV-----------------  144 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCC-----------------
Confidence                              123677888999999999999999999999999999999976654                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh--H
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN--L  291 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~--~  291 (405)
                                ++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||.....  .
T Consensus       145 ----------~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~  214 (267)
T cd08228         145 ----------VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF  214 (267)
T ss_pred             ----------EEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence                      5566666554432211   124688899999999988899999999999999999999999965432  1


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+.. .+..|                                               ......+..+.++|.+||.
T Consensus       215 ~~~~~~~~-~~~~~-----------------------------------------------~~~~~~~~~~~~li~~cl~  246 (267)
T cd08228         215 SLCQKIEQ-CDYPP-----------------------------------------------LPTEHYSEKLRELVSMCIY  246 (267)
T ss_pred             HHHHHHhc-CCCCC-----------------------------------------------CChhhcCHHHHHHHHHHCC
Confidence            21111111 00000                                               0011235678999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .+|++|||+.++++
T Consensus       247 ~~p~~Rp~~~~vl~  260 (267)
T cd08228         247 PDPDQRPDIGYVHQ  260 (267)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=6.6e-35  Score=266.02  Aligned_cols=221  Identities=29%  Similarity=0.511  Sum_probs=175.3

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-hhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      |++.+.||+|++|.||++.+..+++.|++|++..... ....+.+|+++++.+.|+++....                  
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            7889999999999999999998999999999976443 456788899999999988762110                  


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++                          
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~--------------------------  135 (253)
T cd05122          82 GSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--------------------------  135 (253)
T ss_pred             CcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC--------------------------
Confidence                      13578899999999999999999999999999999999997654                          


Q ss_pred             CCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          225 SAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       .++|+|||.+.......  ....++..|++||.+.+..++.++|+||||+++|+|++|..||...+.......+...  
T Consensus       136 -~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--  212 (253)
T cd05122         136 -EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--  212 (253)
T ss_pred             -eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc--
Confidence             46677777665544332  3457889999999999888899999999999999999999999876544433322210  


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                      ..+.                     .                        .....++..+.++|.+||+.||++|||+.|
T Consensus       213 ~~~~---------------------~------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~  247 (253)
T cd05122         213 GPPG---------------------L------------------------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQ  247 (253)
T ss_pred             CCCC---------------------c------------------------CcccccCHHHHHHHHHHccCChhhCCCHHH
Confidence            0000                     0                        000112568899999999999999999999


Q ss_pred             HHcCCC
Q 015532          383 ALRHPF  388 (405)
Q Consensus       383 lL~hp~  388 (405)
                      +++|||
T Consensus       248 ~l~~~~  253 (253)
T cd05122         248 LLKHPF  253 (253)
T ss_pred             HhcCCC
Confidence            999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=5.1e-35  Score=268.59  Aligned_cols=217  Identities=23%  Similarity=0.328  Sum_probs=167.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      +.|++.+.||+|+||.||++..+. +..+|+|.++......+.+..|+++++++.|+++....                 
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            358999999999999999998754 45799999876555556788899999999999873211                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.|++.||.|||++||+||||||+||+++.++.+                       
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~-----------------------  139 (256)
T cd05114          83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVV-----------------------  139 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeE-----------------------
Confidence                       1246788899999999999999999999999999999999766544                       


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                          +|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+.+..+.
T Consensus       140 ----kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~  215 (256)
T cd05114         140 ----KVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMIS  215 (256)
T ss_pred             ----EECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence                555555544322111    11234567999999988889999999999999999999 999998877655554443


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +...                       ..                          .....+..+.+|+.+||..||++||
T Consensus       216 ~~~~-----------------------~~--------------------------~~~~~~~~~~~li~~c~~~~p~~Rp  246 (256)
T cd05114         216 RGFR-----------------------LY--------------------------RPKLASMTVYEVMYSCWHEKPEGRP  246 (256)
T ss_pred             CCCC-----------------------CC--------------------------CCCCCCHHHHHHHHHHccCCcccCc
Confidence            2100                       00                          0112345789999999999999999


Q ss_pred             CHHHHHc
Q 015532          379 KAREALR  385 (405)
Q Consensus       379 ta~elL~  385 (405)
                      |++++++
T Consensus       247 s~~~l~~  253 (256)
T cd05114         247 TFAELLR  253 (256)
T ss_pred             CHHHHHH
Confidence            9999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=7.7e-35  Score=268.09  Aligned_cols=217  Identities=24%  Similarity=0.337  Sum_probs=167.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||.||+|.+..++ .||+|.+.......+.+.+|+++++.+.|+++....                 
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK   84 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence            57999999999999999999986554 599999876555567788999999999998863210                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.                        
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~------------------------  140 (260)
T cd05069          85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLV------------------------  140 (260)
T ss_pred             CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCe------------------------
Confidence                       123577888999999999999999999999999999999976654                        


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                         ++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+....+.
T Consensus       141 ---~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~  217 (260)
T cd05069         141 ---CKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE  217 (260)
T ss_pred             ---EEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence               4555555554332111    11245678999999988889999999999999999999 999998776655444332


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ... ..                                                ......+..+.+++.+||..||++||
T Consensus       218 ~~~-~~------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp  248 (260)
T cd05069         218 RGY-RM------------------------------------------------PCPQGCPESLHELMKLCWKKDPDERP  248 (260)
T ss_pred             cCC-CC------------------------------------------------CCCcccCHHHHHHHHHHccCCcccCc
Confidence            210 00                                                00123456889999999999999999


Q ss_pred             CHHHHHc
Q 015532          379 KAREALR  385 (405)
Q Consensus       379 ta~elL~  385 (405)
                      +++++++
T Consensus       249 ~~~~i~~  255 (260)
T cd05069         249 TFEYIQS  255 (260)
T ss_pred             CHHHHHH
Confidence            9999986

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-35  Score=269.68  Aligned_cols=222  Identities=27%  Similarity=0.457  Sum_probs=164.3

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHH-HHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQ-RLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~-~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|.+..+++.||||++++...    .......|..++. ...|+++....                  
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            579999999999999999999999999865321    1122334444433 34666653211                  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.                          
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~--------------------------  135 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGH--------------------------  135 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc--------------------------
Confidence                     135788999999999999999999999999999999999976554                          


Q ss_pred             CceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 015532          226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP  305 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p  305 (405)
                       ++|+|||++..... .....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+.......+....    
T Consensus       136 -~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----  209 (260)
T cd05611         136 -LKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR----  209 (260)
T ss_pred             -EEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc----
Confidence             56666665543322 223468889999999998888999999999999999999999998766554433322110    


Q ss_pred             hHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH---HH
Q 015532          306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA---RE  382 (405)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta---~e  382 (405)
                                          ..++.                      .....++..+.++|.+||+.||++|||+   +|
T Consensus       210 --------------------~~~~~----------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~  247 (260)
T cd05611         210 --------------------INWPE----------------------EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE  247 (260)
T ss_pred             --------------------cCCCC----------------------cccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence                                01110                      0112346789999999999999999954   79


Q ss_pred             HHcCCCCCCCC
Q 015532          383 ALRHPFFTRDV  393 (405)
Q Consensus       383 lL~hp~f~~~~  393 (405)
                      +|+||||+...
T Consensus       248 ~l~~~~~~~~~  258 (260)
T cd05611         248 IKSHPFFKSIN  258 (260)
T ss_pred             HHcChHhhcCC
Confidence            99999998743

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=6.9e-35  Score=276.42  Aligned_cols=234  Identities=25%  Similarity=0.378  Sum_probs=178.9

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      +.....|...+.||+|+||.||+|++..+++.||+|++....    .....+..|+++++.+.|+++....         
T Consensus        21 ~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  100 (317)
T cd06635          21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTA  100 (317)
T ss_pred             CCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeE
Confidence            334455889999999999999999999999999999986422    2234677899999999998763211         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.                 
T Consensus       101 ~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~-----------------  163 (317)
T cd06635         101 WLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ-----------------  163 (317)
T ss_pred             EEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCC-----------------
Confidence                              234678889999999999999999999999999999999976554                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                                ++|+|||++..... .....|+..|+|||++.   +..++.++|||||||++|+|++|..||........
T Consensus       164 ----------~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~  232 (317)
T cd06635         164 ----------VKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA  232 (317)
T ss_pred             ----------EEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                      56666665543322 22346888999999984   34688999999999999999999999977655444


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.....+.                                                ......++.+.+||.+||+.+
T Consensus       233 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~l~~~  264 (317)
T cd06635         233 LYHIAQNESPT------------------------------------------------LQSNEWSDYFRNFVDSCLQKI  264 (317)
T ss_pred             HHHHHhccCCC------------------------------------------------CCCccccHHHHHHHHHHccCC
Confidence            43332211000                                                001234567899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCCCCc
Q 015532          374 PAERLKAREALRHPFFTRDVRRPT  397 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~~~~  397 (405)
                      |++|||+.++++|+|+........
T Consensus       265 p~~Rpt~~~il~~~~~~~~~~~~~  288 (317)
T cd06635         265 PQDRPTSEELLKHMFVLRERPETV  288 (317)
T ss_pred             cccCcCHHHHHhChhhhccCcccc
Confidence            999999999999999988655443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=8e-35  Score=267.83  Aligned_cols=220  Identities=30%  Similarity=0.492  Sum_probs=168.7

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------hhhHHHHHHHHHHHHHhhcCCCCC-------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGT-------------  153 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~il~~l~~~~~~~~-------------  153 (405)
                      ||.+.++||+|+||.||++++..++..+++|+++...      .....+..|+.+++.+.|+++...             
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            6999999999999999999998877777788775321      223346678999999999886211             


Q ss_pred             ------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          154 ------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       154 ------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                        ....+++..++.++.|++.||.|||++|++|+||||+||+++. +                 
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~-----------------  142 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-N-----------------  142 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-C-----------------
Confidence                              1134778899999999999999999999999999999999963 2                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                                .++|+|||.+......   .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus       143 ----------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~  212 (260)
T cd08222         143 ----------LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS  212 (260)
T ss_pred             ----------CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                      2566676665443221   122457889999999988888999999999999999999999997655443


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+..  +..|.                                               .....+.++.++|.+||+.
T Consensus       213 ~~~~~~~--~~~~~-----------------------------------------------~~~~~~~~~~~li~~~l~~  243 (260)
T cd08222         213 VVLRIVE--GPTPS-----------------------------------------------LPETYSRQLNSIMQSMLNK  243 (260)
T ss_pred             HHHHHHc--CCCCC-----------------------------------------------CcchhcHHHHHHHHHHhcC
Confidence            3322211  11110                                               0123456889999999999


Q ss_pred             CCCCCCCHHHHHcCCCC
Q 015532          373 DPAERLKAREALRHPFF  389 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f  389 (405)
                      ||++||++.|+++||||
T Consensus       244 ~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         244 DPSLRPSAAEILRNPFI  260 (260)
T ss_pred             ChhhCcCHHHHhhCCCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.4e-35  Score=274.87  Aligned_cols=219  Identities=20%  Similarity=0.248  Sum_probs=166.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..|++.++||+|+||.||+|.+..+     ++.||||+++...  ...+.+..|+.++..+.|+++....          
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            3588899999999999999987543     5789999987432  2345677899999999999874211          


Q ss_pred             ---------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          155 ---------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       155 ---------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                                                       ...+++..+..++.|++.||.|||++||+||||||+||+++.++.  
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~--  162 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN--  162 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCc--
Confidence                                             123677788899999999999999999999999999999976554  


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHH
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  276 (405)
                                               +||+|||++.......     ....+++.|+|||++.+..++.++|||||||++|
T Consensus       163 -------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~  217 (283)
T cd05091         163 -------------------------VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLW  217 (283)
T ss_pred             -------------------------eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHH
Confidence                                     4555555544322111     1124567899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcc
Q 015532          277 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  355 (405)
Q Consensus       277 ~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
                      ||++ |..||.+....+....+......                                                 ...
T Consensus       218 el~~~g~~p~~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~  248 (283)
T cd05091         218 EVFSYGLQPYCGYSNQDVIEMIRNRQVL-------------------------------------------------PCP  248 (283)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------CCC
Confidence            9998 89999887665554443321100                                                 011


Q ss_pred             cCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ...+..+.+|+.+||+.||++||++.++++.
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         249 DDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            3456688999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=4.6e-35  Score=269.43  Aligned_cols=228  Identities=29%  Similarity=0.489  Sum_probs=170.7

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      ||.|+||.||+|++..+++.||+|++....    ...+.+.+|+++++++.|+++....                     
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999999899999999986532    2445677899999999998873211                     


Q ss_pred             ------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          155 ------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       155 ------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                            ...+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++++|||++.........          .
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------~  150 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI----------N  150 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccc----------c
Confidence                  135788899999999999999999999999999999999987776666665543322111000          0


Q ss_pred             eccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHH
Q 015532          229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM  308 (405)
Q Consensus       229 l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~  308 (405)
                      .      ...........++..|+|||.+.+..++.++|+||||+++|+|++|..||......+....+...        
T Consensus       151 ~------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--------  216 (265)
T cd05579         151 L------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG--------  216 (265)
T ss_pred             c------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------
Confidence            0      00000112346788999999998888899999999999999999999999877655544333220        


Q ss_pred             HHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH---HHHHc
Q 015532          309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA---REALR  385 (405)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta---~elL~  385 (405)
                                      ...++.                        ....+..+.+|+.+||+.+|++|||+   .++|+
T Consensus       217 ----------------~~~~~~------------------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         217 ----------------KIEWPE------------------------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             ----------------CcCCCc------------------------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence                            011111                        01135688999999999999999999   99999


Q ss_pred             CCCCCC
Q 015532          386 HPFFTR  391 (405)
Q Consensus       386 hp~f~~  391 (405)
                      ||||+.
T Consensus       257 ~~~~~~  262 (265)
T cd05579         257 HPFFKG  262 (265)
T ss_pred             CccccC
Confidence            999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-36  Score=309.53  Aligned_cols=231  Identities=30%  Similarity=0.433  Sum_probs=179.6

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .++-|++...+||.|.||.||-|.+..+|+..|+|-++-..   +......+|..+|..+.|+|++...           
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence            34567888999999999999999999999999999885432   2334566899999999999986543           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      .+..++...+.+..|++.||.|||++|||||||||+||+++.+|.+                  
T Consensus      1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~i------------------ 1373 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLI------------------ 1373 (1509)
T ss_pred             HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcE------------------
Confidence                            1234566777889999999999999999999999999999887754                  


Q ss_pred             cCCCCCCCceeccCCCCccccCCc-------cceecCCCcchhHHHhCC---CCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                               |+.|||.|.......       ...+||+.|||||++.+.   +...++|||||||++.||+||+.||...
T Consensus      1374 ---------K~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1374 ---------KYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred             ---------EeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc
Confidence                     555555554433322       236899999999999864   4668999999999999999999999776


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ++.-++..-. ..|..|                     .                          .++..+.+.+|||..
T Consensus      1445 dne~aIMy~V-~~gh~P---------------------q--------------------------~P~~ls~~g~dFle~ 1476 (1509)
T KOG4645|consen 1445 DNEWAIMYHV-AAGHKP---------------------Q--------------------------IPERLSSEGRDFLEH 1476 (1509)
T ss_pred             cchhHHHhHH-hccCCC---------------------C--------------------------CchhhhHhHHHHHHH
Confidence            5543332111 112111                     1                          123357789999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      ||+.||++|+++.|+|+|-|-+....
T Consensus      1477 Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1477 CLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred             HHhcCchhhhHHHHHHHhhccccccc
Confidence            99999999999999999999876543

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-34  Score=267.15  Aligned_cols=218  Identities=22%  Similarity=0.343  Sum_probs=167.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.+.||+|+||.||+|.+.. ++.||||.++......+.+.+|+.+++++.|+++....                
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            3679999999999999999999754 56799999976555566788999999999998873211                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+                     
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~---------------------  142 (261)
T cd05068          84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNIC---------------------  142 (261)
T ss_pred             cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCE---------------------
Confidence                         1247788999999999999999999999999999999999876655                     


Q ss_pred             CCCCCceeccCCCCccccCCc-cc---eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH-SY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~-~~---~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                            +|+|||++....... ..   ...+..|+|||++.+..++.++|||||||++|+|++ |+.||.+......+..
T Consensus       143 ------~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  216 (261)
T cd05068         143 ------KVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQ  216 (261)
T ss_pred             ------EECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence                  455555443322111 01   122457999999998889999999999999999999 9999988766554443


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+... .                                                ......+..+.+++.+||+.||++
T Consensus       217 ~~~~~~-~------------------------------------------------~~~~~~~~~~~~li~~~l~~~P~~  247 (261)
T cd05068         217 VDQGYR-M------------------------------------------------PCPPGCPKELYDIMLDCWKEDPDD  247 (261)
T ss_pred             HHcCCC-C------------------------------------------------CCCCcCCHHHHHHHHHHhhcCccc
Confidence            322110 0                                                011234568899999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      ||++.++++
T Consensus       248 Rp~~~~l~~  256 (261)
T cd05068         248 RPTFETLQW  256 (261)
T ss_pred             CCCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.8e-35  Score=269.93  Aligned_cols=217  Identities=19%  Similarity=0.278  Sum_probs=163.7

Q ss_pred             eEEEeeeecccceeEEEEEecCC---CcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      |++.+.||+|+||.||+|....+   +..||||+++...   ...+.+..|+.+++.+.|+++....             
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            56789999999999999987653   4789999986432   2345678899999999999863210             


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  208 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~  208 (405)
                                                ...+++..+..++.|++.||.|||++||+||||||+||+++.++.+        
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~--------  152 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTV--------  152 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeE--------
Confidence                                      0246778889999999999999999999999999999999766554        


Q ss_pred             ccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CC
Q 015532          209 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  282 (405)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~  282 (405)
                                         +|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|||++ |.
T Consensus       153 -------------------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~  213 (273)
T cd05035         153 -------------------CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQ  213 (273)
T ss_pred             -------------------EECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCC
Confidence                               555555544322111     11234667999999988889999999999999999999 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||.+....+....+...  .                     ..                          ......+..+
T Consensus       214 ~p~~~~~~~~~~~~~~~~--~---------------------~~--------------------------~~~~~~~~~~  244 (273)
T cd05035         214 TPYPGVENHEIYDYLRHG--N---------------------RL--------------------------KQPEDCLDEL  244 (273)
T ss_pred             CCCCCCCHHHHHHHHHcC--C---------------------CC--------------------------CCCcCCCHHH
Confidence            999876654443322110  0                     00                          0112346689


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+++.+||+.||++|||+.|++++
T Consensus       245 ~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         245 YDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.3e-34  Score=270.66  Aligned_cols=226  Identities=22%  Similarity=0.350  Sum_probs=168.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      .++|++.++||+|+||.||+|.++.     .+..||+|.++...  .....+.+|+.+++.+.|+++....         
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            4689999999999999999997652     34579999886433  2334567899999999998873211         


Q ss_pred             ----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcc
Q 015532          155 ----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       155 ----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                                                  ...++...+..++.||+.||.|||++||+||||||+||+++.++.       
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~-------  157 (288)
T cd05061          85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT-------  157 (288)
T ss_pred             EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCc-------
Confidence                                        011234567889999999999999999999999999999977654       


Q ss_pred             ccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-
Q 015532          207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-  280 (405)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-  280 (405)
                                          ++|+|||+++......     ....++..|+|||.+.+..++.++|||||||++|+|++ 
T Consensus       158 --------------------~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~  217 (288)
T cd05061         158 --------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL  217 (288)
T ss_pred             --------------------EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhC
Confidence                                4555555554322111     11235677999999998889999999999999999998 


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+....+....+..  +.                     ..                          ......++
T Consensus       218 ~~~p~~~~~~~~~~~~~~~--~~---------------------~~--------------------------~~~~~~~~  248 (288)
T cd05061         218 AEQPYQGLSNEQVLKFVMD--GG---------------------YL--------------------------DQPDNCPE  248 (288)
T ss_pred             CCCCCCCCCHHHHHHHHHc--CC---------------------CC--------------------------CCCCCCCH
Confidence            7899987665443332211  00                     00                          01123356


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHc------CCCCCCC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALR------HPFFTRD  392 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~------hp~f~~~  392 (405)
                      .+.+++.+||+.||++|||+.++++      ||||+.-
T Consensus       249 ~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         249 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            8999999999999999999999987      9999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=4.9e-35  Score=272.25  Aligned_cols=222  Identities=27%  Similarity=0.361  Sum_probs=159.2

Q ss_pred             eeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHH---HhhcCCCCCc-----------------
Q 015532           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQR---LARHDIGGTR-----------------  154 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~---l~~~~~~~~~-----------------  154 (405)
                      .||+|+||.||+|.+..+++.||||++....    ........|..+++.   ..|+++....                 
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999999999999999986432    111223344444433   3455552110                 


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..++.++.|++.||.|||+++|+||||||+||+++.++.                         
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~-------------------------  135 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH-------------------------  135 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCC-------------------------
Confidence                      134788999999999999999999999999999999999976654                         


Q ss_pred             CCceeccCCCCccccC-CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          225 SAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                        ++|+|||.+..... ......|+..|+|||++.+. .++.++||||+||++|+|++|..||.................
T Consensus       136 --~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  213 (278)
T cd05606         136 --VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT  213 (278)
T ss_pred             --EEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc
Confidence              45555555432221 11234689999999999754 689999999999999999999999976532211110000000


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC----
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL----  378 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp----  378 (405)
                      .                     .                          ...+...+.++.+++.+||..||++|+    
T Consensus       214 ~---------------------~--------------------------~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~  246 (278)
T cd05606         214 M---------------------A--------------------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLG  246 (278)
T ss_pred             c---------------------C--------------------------CCCCCcCCHHHHHHHHHHhhcCHHhccCCCC
Confidence            0                     0                          011123467899999999999999999    


Q ss_pred             -CHHHHHcCCCCCCCCC
Q 015532          379 -KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 -ta~elL~hp~f~~~~~  394 (405)
                       ++.++++||||+....
T Consensus       247 ~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         247 RGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             CCHHHHHhCccccCCCc
Confidence             9999999999988643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=6.2e-35  Score=275.62  Aligned_cols=227  Identities=26%  Similarity=0.381  Sum_probs=174.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ....|...+.||+|+||.||+|++..+++.||||.+...    ......+..|+++++.+.|+++....           
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence            345688899999999999999999999999999998532    22334567899999999998863321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.|++.||.|||++|++||||||+||+++.++.                   
T Consensus        93 v~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~-------------------  153 (308)
T cd06634          93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL-------------------  153 (308)
T ss_pred             EEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCc-------------------
Confidence                            124678889999999999999999999999999999999976554                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              ++|+|||++...... ....|+..|+|||.+.+   ..++.++|||||||++|+|++|..||...+..+...
T Consensus       154 --------~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  224 (308)
T cd06634         154 --------VKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY  224 (308)
T ss_pred             --------EEECCcccceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH
Confidence                    556666655433222 23468889999999853   457889999999999999999999997655443333


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.+..  .|.                                              ......+..+.+||.+||..+|+
T Consensus       225 ~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~li~~cl~~~P~  256 (308)
T cd06634         225 HIAQNE--SPA----------------------------------------------LQSGHWSEYFRNFVDSCLQKIPQ  256 (308)
T ss_pred             HHhhcC--CCC----------------------------------------------cCcccccHHHHHHHHHHhhCCcc
Confidence            222110  000                                              00123456789999999999999


Q ss_pred             CCCCHHHHHcCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRD  392 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~  392 (405)
                      +||+++++++|||+...
T Consensus       257 ~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         257 DRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             cCCCHHHHhhCcccccc
Confidence            99999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8.4e-35  Score=267.31  Aligned_cols=218  Identities=21%  Similarity=0.308  Sum_probs=167.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      +.|++.+.||+|+||+||+|.+.. +..||||.++......+.+.+|+.+++.+.|+++....                 
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            358999999999999999998754 44599999876555556788999999999998873211                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+                       
T Consensus        83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~-----------------------  139 (256)
T cd05113          83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCV-----------------------  139 (256)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCE-----------------------
Confidence                       1247888999999999999999999999999999999999766544                       


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                          +|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+.
T Consensus       140 ----kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~  215 (256)
T cd05113         140 ----KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS  215 (256)
T ss_pred             ----EECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh
Confidence                555555443322111    11234567999999998889999999999999999998 999998766554443332


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +....                                                 ......+..+.+++.+||+.||++||
T Consensus       216 ~~~~~-------------------------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp  246 (256)
T cd05113         216 QGLRL-------------------------------------------------YRPHLASEKVYAIMYSCWHEKAEERP  246 (256)
T ss_pred             cCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcCCCcccCC
Confidence            21100                                                 00112356889999999999999999


Q ss_pred             CHHHHHcC
Q 015532          379 KAREALRH  386 (405)
Q Consensus       379 ta~elL~h  386 (405)
                      |+.+++++
T Consensus       247 ~~~~ll~~  254 (256)
T cd05113         247 TFQQLLSS  254 (256)
T ss_pred             CHHHHHHh
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.3e-34  Score=263.74  Aligned_cols=221  Identities=28%  Similarity=0.463  Sum_probs=172.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|++.++||+|+||.||++.+..+++.||+|.+....   .....+..|+.+++.+.|+++....               
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            5899999999999999999999999999999986432   3345667899999999998873211               


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.                   
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~-------------------  141 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDL-------------------  141 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCc-------------------
Confidence                            134677888999999999999999999999999999999987654                   


Q ss_pred             cCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                              ++|+|||++...... .....++..|++||.+.+..++.++|+||||+++|+|++|..||...+..+....+
T Consensus       142 --------~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~  213 (256)
T cd08530         142 --------VKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKV  213 (256)
T ss_pred             --------EEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                    455555555433222 11235788999999999888999999999999999999999999876654433222


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ...  ..+                                               ......+.++.++|.+||+.+|++|
T Consensus       214 ~~~--~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R  244 (256)
T cd08530         214 QRG--KYP-----------------------------------------------PIPPIYSQDLQNFIRSMLQVKPKLR  244 (256)
T ss_pred             hcC--CCC-----------------------------------------------CCchhhCHHHHHHHHHHcCCCcccC
Confidence            110  000                                               0011235678999999999999999


Q ss_pred             CCHHHHHcCCCC
Q 015532          378 LKAREALRHPFF  389 (405)
Q Consensus       378 pta~elL~hp~f  389 (405)
                      ||+.++++||++
T Consensus       245 p~~~~~l~~p~~  256 (256)
T cd08530         245 PNCDKILASPAV  256 (256)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.2e-34  Score=269.31  Aligned_cols=221  Identities=20%  Similarity=0.310  Sum_probs=165.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      ..++|++.+.||+|+||.||+|.+..     ++..||||+++...  .....+.+|+.+++.+.|+++....        
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            45789999999999999999998753     35679999986432  2345678899999999999873211        


Q ss_pred             -----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCc
Q 015532          155 -----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       155 -----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df  205 (405)
                                                   ...+++..+..++.|++.||.|||+.|++||||||+||+++.++.      
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~------  157 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT------  157 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC------
Confidence                                         011345677889999999999999999999999999999986654      


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                                           ++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++
T Consensus       158 ---------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~  216 (277)
T cd05062         158 ---------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT  216 (277)
T ss_pred             ---------------------EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHc
Confidence                                 4555555544322111     11245678999999998889999999999999999999


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          281 -GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       281 -g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                       |..||.+....+....+...  ..+                                               ......+
T Consensus       217 ~~~~p~~~~~~~~~~~~~~~~--~~~-----------------------------------------------~~~~~~~  247 (277)
T cd05062         217 LAEQPYQGMSNEQVLRFVMEG--GLL-----------------------------------------------DKPDNCP  247 (277)
T ss_pred             CCCCCCCCCCHHHHHHHHHcC--CcC-----------------------------------------------CCCCCCC
Confidence             78999876655444332211  000                                               0112345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ..+.+++.+||+.||++|||+.|++++
T Consensus       248 ~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         248 DMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            688999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.6e-34  Score=264.62  Aligned_cols=223  Identities=31%  Similarity=0.480  Sum_probs=173.1

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +|.+.+.||+|++|.||+|.+..+++.|++|++....   ...+.+.+|+.+++++.|+++....               
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4888999999999999999999899999999986544   3456788899999999998763211               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+                    
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~--------------------  140 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVV--------------------  140 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCE--------------------
Confidence                          1256788899999999999999999999999999999999876544                    


Q ss_pred             CCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                             +|+|||.+......     .....++..|+|||.+.+..++.++||||||+++|+|++|..||....+...  
T Consensus       141 -------~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--  211 (260)
T cd06606         141 -------KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA--  211 (260)
T ss_pred             -------EEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--
Confidence                   55555554433222     1234688899999999888899999999999999999999999987652111  


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.....                                             ...........+..+.+||.+||+.||+
T Consensus       212 ~~~~~~~---------------------------------------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~  246 (260)
T cd06606         212 ALYKIGS---------------------------------------------SGEPPEIPEHLSEEAKDFLRKCLRRDPK  246 (260)
T ss_pred             HHHhccc---------------------------------------------cCCCcCCCcccCHHHHHHHHHhCcCChh
Confidence            1111000                                             0000011223366899999999999999


Q ss_pred             CCCCHHHHHcCCCC
Q 015532          376 ERLKAREALRHPFF  389 (405)
Q Consensus       376 ~Rpta~elL~hp~f  389 (405)
                      +||++.++++||||
T Consensus       247 ~Rp~~~~ll~~~~~  260 (260)
T cd06606         247 KRPTADELLQHPFL  260 (260)
T ss_pred             hCCCHHHHhhCCCC
Confidence            99999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=9.3e-35  Score=272.78  Aligned_cols=229  Identities=26%  Similarity=0.396  Sum_probs=168.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHh-hcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~-~~~~~~~~--------------  154 (405)
                      +.|++.+.||+|+||.||+|.+..+++.||||+++...  .....+..|+.++..+. |+++....              
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            56999999999999999999999889999999996532  23344566777666665 66652211              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                   ...+++..+..++.||+.||.|||+ +||+||||+|+||+++.++.                     
T Consensus        95 ~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~---------------------  153 (296)
T cd06618          95 LMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGN---------------------  153 (296)
T ss_pred             ccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCC---------------------
Confidence                         1347788889999999999999997 69999999999999976654                     


Q ss_pred             CCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCC----CCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALFQTHEN-LEH  293 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~~lltg~~pf~~~~~-~~~  293 (405)
                            ++|+|||.+......  .....++..|+|||.+.+..    ++.++|||||||++|+|++|..||..... .+.
T Consensus       154 ------~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  227 (296)
T cd06618         154 ------VKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEV  227 (296)
T ss_pred             ------EEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHH
Confidence                  455555555432211  11235778899999987653    78899999999999999999999965322 122


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+   .....                    ..+                        .....++.++.+|+.+||..|
T Consensus       228 ~~~~---~~~~~--------------------~~~------------------------~~~~~~~~~l~~li~~~l~~~  260 (296)
T cd06618         228 LTKI---LQEEP--------------------PSL------------------------PPNEGFSPDFCSFVDLCLTKD  260 (296)
T ss_pred             HHHH---hcCCC--------------------CCC------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            2111   11000                    000                        001124568899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~  394 (405)
                      |++|||++++++||||+...+
T Consensus       261 p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         261 HRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             hhhCCCHHHHhcChhhhccch
Confidence            999999999999999998544

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.6e-34  Score=271.40  Aligned_cols=219  Identities=20%  Similarity=0.265  Sum_probs=163.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc--EEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..++.  .+|+|.++..  ....+.+..|+.++.++ .|+++....            
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            469999999999999999999877664  4788888642  23345678899999999 577653210            


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..+..++.||+.||+|||++||+||||||+|||++.++.    
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~----  157 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLA----  157 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCe----
Confidence                                           013677888999999999999999999999999999999976554    


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccc--eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-  280 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-  280 (405)
                                             +||+|||++.........  ...+..|+|||++.+..++.++|||||||++|+|++ 
T Consensus       158 -----------------------~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~  214 (297)
T cd05089         158 -----------------------SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSL  214 (297)
T ss_pred             -----------------------EEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcC
Confidence                                   555666655432211111  123457999999998889999999999999999997 


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||......+....+.+...                                                 ......++.
T Consensus       215 g~~pf~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~  245 (297)
T cd05089         215 GGTPYCGMTCAELYEKLPQGYR-------------------------------------------------MEKPRNCDD  245 (297)
T ss_pred             CCCCCCCCCHHHHHHHHhcCCC-------------------------------------------------CCCCCCCCH
Confidence            9999987765554433221100                                                 001123466


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+.+|+.+||+.||.+|||++++++.
T Consensus       246 ~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         246 EVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            89999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.4e-34  Score=265.68  Aligned_cols=215  Identities=20%  Similarity=0.292  Sum_probs=165.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      .+|++.+.||+|+||.||++...  +..||+|.++... ..+.+.+|+.+++.+.|+++....                 
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            46899999999999999999864  6779999986533 345688899999999998763211                 


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                      
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~----------------------  140 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNV----------------------  140 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCc----------------------
Confidence                         113677888999999999999999999999999999999976654                      


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                           ++|+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+.+.
T Consensus       141 -----~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~  215 (256)
T cd05082         141 -----AKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG  215 (256)
T ss_pred             -----EEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence                 566666655443333333345668999999988889999999999999999997 99999766554433332211


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      ..                                                 .......++.+.+++.+||+.||++|||+
T Consensus       216 ~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  246 (256)
T cd05082         216 YK-------------------------------------------------MDAPDGCPPVVYDVMKQCWHLDAATRPSF  246 (256)
T ss_pred             CC-------------------------------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence            00                                                 01112346789999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      .++++
T Consensus       247 ~~l~~  251 (256)
T cd05082         247 LQLRE  251 (256)
T ss_pred             HHHHH
Confidence            99975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=2.2e-34  Score=269.20  Aligned_cols=218  Identities=22%  Similarity=0.322  Sum_probs=166.5

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|.+.+.||+|+||.||++.+.     .++..||+|.++... ...+.+.+|+.+++++.|+++....           
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            46999999999999999999853     345679999986533 3455688999999999998873211           


Q ss_pred             -----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCc
Q 015532          155 -----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       155 -----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df  205 (405)
                                                   ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+     
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~-----  159 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV-----  159 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE-----
Confidence                                         0137888999999999999999999999999999999999876654     


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                                            +|+|||.+.......     ....++..|+|||++.+..++.++|||||||++|+|++
T Consensus       160 ----------------------kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t  217 (288)
T cd05093         160 ----------------------KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT  217 (288)
T ss_pred             ----------------------EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence                                  555555444322111     11245678999999998889999999999999999998


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          281 -GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       281 -g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                       |..||......+.+..+...  ..+                                               ......+
T Consensus       218 ~g~~p~~~~~~~~~~~~i~~~--~~~-----------------------------------------------~~~~~~~  248 (288)
T cd05093         218 YGKQPWYQLSNNEVIECITQG--RVL-----------------------------------------------QRPRTCP  248 (288)
T ss_pred             CCCCCCCCCCHHHHHHHHHcC--CcC-----------------------------------------------CCCCCCC
Confidence             99999877655544333221  000                                               0012345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .++.+|+.+||+.||.+|||+.++++
T Consensus       249 ~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         249 KEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHH
Confidence            68999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-36  Score=284.99  Aligned_cols=207  Identities=26%  Similarity=0.359  Sum_probs=165.3

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------------
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------------  154 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------------  154 (405)
                      ++-||+|+.|.||+|+..  ++.||||.++.      .-..+|+-|++|.|+||+...                      
T Consensus       129 LeWlGSGaQGAVF~Grl~--netVAVKKV~e------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~  200 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH--NETVAVKKVRE------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY  200 (904)
T ss_pred             hhhhccCcccceeeeecc--CceehhHHHhh------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence            677999999999999975  78899997753      233588999999999995432                      


Q ss_pred             -----cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCcee
Q 015532          155 -----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL  229 (405)
Q Consensus       155 -----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl  229 (405)
                           ...+.......+..+|+.|+.|||.+.|||||||.-||||..+.                           .|||
T Consensus       201 ~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d---------------------------~VKI  253 (904)
T KOG4721|consen  201 EVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD---------------------------VVKI  253 (904)
T ss_pred             HHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc---------------------------eEEe
Confidence                 23456677788999999999999999999999999999997654                           4677


Q ss_pred             ccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChH
Q 015532          230 IDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHH  307 (405)
Q Consensus       230 ~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~  307 (405)
                      +|||.++......  ..++||..|||||+|.+.+.+.|+|||||||+|||||||..||..-+...++.-+    |     
T Consensus       254 sDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV----G-----  324 (904)
T KOG4721|consen  254 SDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV----G-----  324 (904)
T ss_pred             ccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec----c-----
Confidence            7777776554432  3479999999999999999999999999999999999999999765432222111    0     


Q ss_pred             HHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          308 MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                                                             ...+....+..+++-|+=||++||+-.|..||++.++|.|
T Consensus       325 ---------------------------------------sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  325 ---------------------------------------SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             ---------------------------------------CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence                                                   0112223345667789999999999999999999999998

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.2e-34  Score=265.39  Aligned_cols=212  Identities=19%  Similarity=0.301  Sum_probs=160.4

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      +.||+|+||.||+|++..+++.||+|.+...  ......+.+|+++++.+.|+++....                     
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4699999999999999999999999987542  23456688999999999999873211                     


Q ss_pred             -------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCc
Q 015532          155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  227 (405)
Q Consensus       155 -------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  227 (405)
                             ...+++..++.++.|++.||.|||++||+||||||+||+++.++.++++|||                     
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg---------------------  139 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFG---------------------  139 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccc---------------------
Confidence                   1246788999999999999999999999999999999999876655555555                     


Q ss_pred             eeccCCCCccccCCcc-----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 015532          228 KLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       228 kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~  301 (405)
                            .+........     ...++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+....
T Consensus       140 ------~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~  213 (252)
T cd05084         140 ------MSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV  213 (252)
T ss_pred             ------cCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC
Confidence                  4332211110     0123456999999998889999999999999999998 999997655443322221100


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                                             ..                          ......+..+.+|+.+||+.||++|||+.
T Consensus       214 -----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~  244 (252)
T cd05084         214 -----------------------RL--------------------------PCPELCPDAVYRLMERCWEYDPGQRPSFS  244 (252)
T ss_pred             -----------------------CC--------------------------CCcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence                                   00                          01123466889999999999999999999


Q ss_pred             HHHc
Q 015532          382 EALR  385 (405)
Q Consensus       382 elL~  385 (405)
                      ++++
T Consensus       245 ~~~~  248 (252)
T cd05084         245 TVHQ  248 (252)
T ss_pred             HHHH
Confidence            9975

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3e-34  Score=264.05  Aligned_cols=218  Identities=23%  Similarity=0.318  Sum_probs=169.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.+.||+|+||.||+|.+. +++.||||.+.......+.+..|+.+++.+.|+++....                
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            468999999999999999999975 457799999976555567788999999999998873211                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+                     
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~---------------------  142 (261)
T cd05034          84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVC---------------------  142 (261)
T ss_pred             CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCE---------------------
Confidence                         1246788899999999999999999999999999999999876654                     


Q ss_pred             CCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                            +|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+......+..
T Consensus       143 ------~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~  216 (261)
T cd05034         143 ------KIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQ  216 (261)
T ss_pred             ------EECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence                  555555544322111    11234567999999998889999999999999999998 9999988766555544


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +......                                                 ......+..+.+++.+||+.||++
T Consensus       217 ~~~~~~~-------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~  247 (261)
T cd05034         217 VERGYRM-------------------------------------------------PRPPNCPEELYDLMLQCWDKDPEE  247 (261)
T ss_pred             HHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcccCccc
Confidence            3221100                                                 001123567899999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      ||+++++++
T Consensus       248 Rp~~~~l~~  256 (261)
T cd05034         248 RPTFEYLQS  256 (261)
T ss_pred             CCCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=2e-34  Score=266.16  Aligned_cols=219  Identities=22%  Similarity=0.281  Sum_probs=166.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC---CcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||+||+|.+..+   ...||||+++..  ......+..|+.+++.+.|+++....            
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            4699999999999999999998644   457999998643  23345678899999999999873311            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.++++||             
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~df-------------  150 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDF-------------  150 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECcc-------------
Confidence                            125788899999999999999999999999999999999987665555554             


Q ss_pred             cCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                                    |++.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||......+
T Consensus       151 --------------g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~  216 (266)
T cd05033         151 --------------GLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD  216 (266)
T ss_pred             --------------chhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH
Confidence                          4443332110     01234578999999998889999999999999999998 999997766554


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.+... .                                                ......+..+.+|+.+||+.
T Consensus       217 ~~~~~~~~~~-~------------------------------------------------~~~~~~~~~l~~li~~cl~~  247 (266)
T cd05033         217 VIKAVEDGYR-L------------------------------------------------PPPMDCPSALYQLMLDCWQK  247 (266)
T ss_pred             HHHHHHcCCC-C------------------------------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            4433322100 0                                                00123466889999999999


Q ss_pred             CCCCCCCHHHHHcC
Q 015532          373 DPAERLKAREALRH  386 (405)
Q Consensus       373 dP~~Rpta~elL~h  386 (405)
                      ||++||+++|++++
T Consensus       248 ~p~~Rp~~~ei~~~  261 (266)
T cd05033         248 DRNERPTFSQIVST  261 (266)
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1.7e-34  Score=266.63  Aligned_cols=219  Identities=28%  Similarity=0.431  Sum_probs=166.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||||.+...    ......+.+|+.+++.+.|+++....             
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4688999999999999999999989999999987542    23345678899999999998873211             


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.                 
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~-----------------  144 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV-----------------  144 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC-----------------
Confidence                              124678889999999999999999999999999999999977664                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH--
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL--  291 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~--  291 (405)
                                ++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||.+....  
T Consensus       145 ----------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  214 (267)
T cd08229         145 ----------VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY  214 (267)
T ss_pred             ----------EEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence                      4555555544322211   1246888999999999888999999999999999999999999754321  


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+...                          .++.                      ......+..+.+||.+||.
T Consensus       215 ~~~~~~~~~--------------------------~~~~----------------------~~~~~~~~~~~~li~~~l~  246 (267)
T cd08229         215 SLCKKIEQC--------------------------DYPP----------------------LPSDHYSEELRQLVNMCIN  246 (267)
T ss_pred             HHhhhhhcC--------------------------CCCC----------------------CCcccccHHHHHHHHHhcC
Confidence            111111100                          0000                      0012346689999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .||++|||+.++++
T Consensus       247 ~~p~~Rpt~~~i~~  260 (267)
T cd08229         247 PDPEKRPDITYVYD  260 (267)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.8e-34  Score=269.06  Aligned_cols=219  Identities=20%  Similarity=0.299  Sum_probs=165.3

Q ss_pred             CCeEEEeeeecccceeEEEEEec----CCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~----~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|++.+.||+|+||+||+|...    .+++.||+|.++...  .....+.+|+.+++.+.|+++....           
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            45899999999999999999853    456789999986422  2235677899999999998873211           


Q ss_pred             ---------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          155 ---------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       155 ---------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.  
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~--  162 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLH--  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCc--
Confidence                                             012567778889999999999999999999999999999987654  


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHH
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  276 (405)
                                               ++|+|||++......     .....++..|+|||++.+..++.++|||||||++|
T Consensus       163 -------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~  217 (283)
T cd05090         163 -------------------------VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLW  217 (283)
T ss_pred             -------------------------EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHH
Confidence                                     455555555432111     11234567799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcc
Q 015532          277 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  355 (405)
Q Consensus       277 ~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
                      +|++ |..||.+.........+.... .                      .                          ...
T Consensus       218 el~~~g~~p~~~~~~~~~~~~~~~~~-~----------------------~--------------------------~~~  248 (283)
T cd05090         218 EIFSFGLQPYYGFSNQEVIEMVRKRQ-L----------------------L--------------------------PCS  248 (283)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCC-c----------------------C--------------------------CCC
Confidence            9998 999998766544443332110 0                      0                          011


Q ss_pred             cCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ...++.+.+++.+||+.||++||++.+++++
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         249 EDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            2346688999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=2e-34  Score=264.86  Aligned_cols=211  Identities=24%  Similarity=0.358  Sum_probs=161.3

Q ss_pred             eeecccceeEEEEEe--cCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           99 KMGEGTFGQVVECFD--NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~--~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +||+|+||.||+|.+  ..++..||+|+++...   ...+.+..|+.+++.+.|+++....                   
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            699999999999965  4567899999986432   2356678899999999999874211                   


Q ss_pred             -------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCc
Q 015532          155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  227 (405)
Q Consensus       155 -------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  227 (405)
                             ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                           +
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~---------------------------~  134 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHY---------------------------A  134 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCe---------------------------E
Confidence                   134688899999999999999999999999999999999976554                           5


Q ss_pred             eeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          228 KLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       228 kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                      +|+|||.+.......      ....++..|+|||.+.+..++.++|||||||++|||++ |..||......+....+.+.
T Consensus       135 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~  214 (257)
T cd05116         135 KISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG  214 (257)
T ss_pred             EECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC
Confidence            556666554332211      11234578999999988889999999999999999998 99999876665544433221


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      .                       ..                          ..+...+.++.+||.+||+.||++||++
T Consensus       215 ~-----------------------~~--------------------------~~~~~~~~~l~~li~~~~~~~p~~Rp~~  245 (257)
T cd05116         215 E-----------------------RM--------------------------ECPQRCPPEMYDLMKLCWTYGVDERPGF  245 (257)
T ss_pred             C-----------------------CC--------------------------CCCCCCCHHHHHHHHHHhccCchhCcCH
Confidence            0                       00                          0112346789999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      ++|.+
T Consensus       246 ~~i~~  250 (257)
T cd05116         246 AVVEL  250 (257)
T ss_pred             HHHHH
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-34  Score=266.46  Aligned_cols=217  Identities=19%  Similarity=0.292  Sum_probs=166.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      .|++.+.||+|+||.||+|.++ ++..+|+|++.......+.+..|+++++.+.|+++....                  
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            4889999999999999999886 466799999876555556788899999999998873210                  


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                         
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~-------------------------  138 (256)
T cd05059          84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNV-------------------------  138 (256)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCc-------------------------
Confidence                      124678889999999999999999999999999999999987664                         


Q ss_pred             CCceeccCCCCccccCCcc----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 015532          225 SAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER  299 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~  299 (405)
                        ++|+|||.+........    ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+..
T Consensus       139 --~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~  216 (256)
T cd05059         139 --VKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA  216 (256)
T ss_pred             --EEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc
Confidence              45555555443222111    1123457999999998889999999999999999999 8999987666554433321


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ...                                                 .......+..+.+++.+||..+|++|||
T Consensus       217 ~~~-------------------------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt  247 (256)
T cd05059         217 GYR-------------------------------------------------LYRPKLAPTEVYTIMYSCWHEKPEDRPA  247 (256)
T ss_pred             CCc-------------------------------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            100                                                 0011234668999999999999999999


Q ss_pred             HHHHHcC
Q 015532          380 AREALRH  386 (405)
Q Consensus       380 a~elL~h  386 (405)
                      +.|+++.
T Consensus       248 ~~~~l~~  254 (256)
T cd05059         248 FKKLLSQ  254 (256)
T ss_pred             HHHHHHH
Confidence            9999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-35  Score=259.62  Aligned_cols=230  Identities=23%  Similarity=0.410  Sum_probs=175.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCC-CC--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDI-GG--------------  152 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~-~~--------------  152 (405)
                      +.|.++++||+|+|++|.++++++|.+.||+|++++.    +...+-.+.|-.+....+.+.+ ++              
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            5799999999999999999999999999999999753    2222334556666666544332 11              


Q ss_pred             -------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          153 -------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       153 -------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                   ...+.++++.++.+..+|+.||.|||++|||.||||.+|+|++..|++|++|||+.+....++    
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g----  405 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG----  405 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCC----
Confidence                         113578999999999999999999999999999999999999999988887777655433222    


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC-------CChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT-------HENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~-------~~~~~  292 (405)
                                          ...++++||+.|+|||++.|..|+..+|+|+||++++||+.|+.||.-       .+..+
T Consensus       406 --------------------d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nted  465 (593)
T KOG0695|consen  406 --------------------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTED  465 (593)
T ss_pred             --------------------cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhH
Confidence                                233567999999999999999999999999999999999999999952       11222


Q ss_pred             HHHH-HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          293 HLAM-MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       293 ~~~~-i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .+.+ |.+..-.+|                                                  ...+-.+..+++..|.
T Consensus       466 ylfqvilekqirip--------------------------------------------------rslsvkas~vlkgfln  495 (593)
T KOG0695|consen  466 YLFQVILEKQIRIP--------------------------------------------------RSLSVKASHVLKGFLN  495 (593)
T ss_pred             HHHHHHhhhccccc--------------------------------------------------ceeehhhHHHHHHhhc
Confidence            2222 111111111                                                  2234456688999999


Q ss_pred             cCCCCCC------CHHHHHcCCCCCCCCCC
Q 015532          372 YDPAERL------KAREALRHPFFTRDVRR  395 (405)
Q Consensus       372 ~dP~~Rp------ta~elL~hp~f~~~~~~  395 (405)
                      +||.+|.      ...++..|+||+.-.+.
T Consensus       496 kdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  496 KDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             CCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence            9999997      47899999999965443

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.1e-34  Score=268.36  Aligned_cols=222  Identities=27%  Similarity=0.394  Sum_probs=162.8

Q ss_pred             CCeEEEeee--ecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc--------------
Q 015532           92 PRYRILSKM--GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~L--G~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~--------------  154 (405)
                      +.|++.+.+  |+|+||.||+++++.+++.+|+|++.......    .|+.+...+ .|+++....              
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e   89 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD   89 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEE
Confidence            457776666  99999999999999999999999986532211    133232222 466552110              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++.++..++.||+.||.|||+.|++||||||+||+++.++                       
T Consensus        90 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-----------------------  146 (267)
T PHA03390         90 YIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-----------------------  146 (267)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-----------------------
Confidence                         13678999999999999999999999999999999999997654                       


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH-LAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~-~~~i~~~  300 (405)
                         ..++|+|||.+...... ....|+..|+|||++.+..++.++|||||||++|+|++|..||........ ...+...
T Consensus       147 ---~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  222 (267)
T PHA03390        147 ---DRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR  222 (267)
T ss_pred             ---CeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh
Confidence               14667777766544322 224688999999999988899999999999999999999999975433221 1111110


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC-
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK-  379 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt-  379 (405)
                      ...                                               ........+..+.+||.+||+.||++|++ 
T Consensus       223 ~~~-----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  255 (267)
T PHA03390        223 QQK-----------------------------------------------KLPFIKNVSKNANDFVQSMLKYNINYRLTN  255 (267)
T ss_pred             hcc-----------------------------------------------cCCcccccCHHHHHHHHHHhccChhhCCch
Confidence            000                                               00111245778999999999999999996 


Q ss_pred             HHHHHcCCCCCC
Q 015532          380 AREALRHPFFTR  391 (405)
Q Consensus       380 a~elL~hp~f~~  391 (405)
                      ++|+|+||||+.
T Consensus       256 ~~~~l~h~~~~~  267 (267)
T PHA03390        256 YNEIIKHPFLKI  267 (267)
T ss_pred             HHHHhcCCcccC
Confidence            599999999974

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-36  Score=280.77  Aligned_cols=227  Identities=26%  Similarity=0.404  Sum_probs=184.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCC---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGG---------------  152 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~---------------  152 (405)
                      ..++++..||-|+||.|-++..+.....+|+|++++..    +..+....|-+||.....+.|+.               
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            45788899999999999999887666679999997643    45566778889999887766522               


Q ss_pred             ------C------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          153 ------T------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       153 ------~------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                            .      ..+.|.+..++.++..+++|++|||++|||.|||||+|+|++.+|.+                    
T Consensus       500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~--------------------  559 (732)
T KOG0614|consen  500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYL--------------------  559 (732)
T ss_pred             HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCce--------------------
Confidence                  1      13678899999999999999999999999999999999999888765                    


Q ss_pred             CCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                             ||.|||+|+......  -+++||+.|.|||++.+.+++.++|.||||+++|||++|.+||.+.+.......|.
T Consensus       560 -------KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL  632 (732)
T KOG0614|consen  560 -------KLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL  632 (732)
T ss_pred             -------EEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence                   555555555444333  34799999999999999999999999999999999999999999999888777775


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +.+..                      +                          ..+..+...+.+||+++...+|.+|.
T Consensus       633 kGid~----------------------i--------------------------~~Pr~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  633 KGIDK----------------------I--------------------------EFPRRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             hhhhh----------------------h--------------------------hcccccchhHHHHHHHHHhcCcHhhh
Confidence            53211                      1                          12234466788999999999999998


Q ss_pred             C-----HHHHHcCCCCCCCC
Q 015532          379 K-----AREALRHPFFTRDV  393 (405)
Q Consensus       379 t-----a~elL~hp~f~~~~  393 (405)
                      .     +.+|-+|-||.+-.
T Consensus       665 G~~~~gI~DIkkH~Wf~gfd  684 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEGFD  684 (732)
T ss_pred             ccccCChHHHHhhhhhhcCC
Confidence            5     89999999998754

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1.7e-34  Score=272.05  Aligned_cols=219  Identities=21%  Similarity=0.259  Sum_probs=162.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc--EEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------------  154 (405)
                      +.|++.+.||+|+||.||+|.+..++.  .+|+|.++..  ......+.+|+.++.++ .|+++....            
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            469999999999999999999877765  4577776532  23345677899999999 777763211            


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..++.++.||+.||+|||++||+||||||+|||++.++.    
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~----  162 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV----  162 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCc----
Confidence                                           013678889999999999999999999999999999999976554    


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-  280 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-  280 (405)
                                             ++|+|||++.......  ....++..|+|||++.+..++.++|||||||++|+|++ 
T Consensus       163 -----------------------~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  219 (303)
T cd05088         163 -----------------------AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL  219 (303)
T ss_pred             -----------------------EEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhc
Confidence                                   5555555553221111  11123567999999988889999999999999999998 


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+.+..+....+....                       .                          .......+.
T Consensus       220 g~~p~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~  250 (303)
T cd05088         220 GGTPYCGMTCAELYEKLPQGY-----------------------R--------------------------LEKPLNCDD  250 (303)
T ss_pred             CCCCcccCChHHHHHHHhcCC-----------------------c--------------------------CCCCCCCCH
Confidence            999997765544332221100                       0                          001122456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+.+|+.+||+.||++|||+++++++
T Consensus       251 ~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         251 EVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            88999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.5e-34  Score=269.52  Aligned_cols=234  Identities=22%  Similarity=0.299  Sum_probs=163.5

Q ss_pred             CCCe-EEEeeeecccceeEEEEEe----cCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           91 TPRY-RILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        91 ~~~y-~~~~~LG~G~fg~V~~a~~----~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      .+|| ++.+.||+|+||+||++..    ..+++.||+|+++...  ...+.+.+|+++++.+.|+++....         
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK   81 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence            4566 9999999999999988653    3567889999987532  2456678899999999998863211         


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+++             
T Consensus        82 ~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l-------------  148 (283)
T cd05080          82 GLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKI-------------  148 (283)
T ss_pred             eEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEE-------------
Confidence                               124688899999999999999999999999999999999987665544             


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                    +|||++.......      ....++..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus       149 --------------~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~  214 (283)
T cd05080         149 --------------GDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP  214 (283)
T ss_pred             --------------eecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence                          4555443322111      11235667999999988889999999999999999999999986533


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ... ...+....+....                             .........    ..........+..+.+++.+|
T Consensus       215 ~~~-~~~~~~~~~~~~~-----------------------------~~~~~~~~~----~~~~~~~~~~~~~~~~li~~c  260 (283)
T cd05080         215 KKF-EEMIGPKQGQMTV-----------------------------VRLIELLER----GMRLPCPKNCPQEVYILMKNC  260 (283)
T ss_pred             chh-hhhhcccccccch-----------------------------hhhhhhhhc----CCCCCCCCCCCHHHHHHHHHH
Confidence            210 0000000000000                             000000000    000011234567899999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |+.||++|||++++++
T Consensus       261 l~~~p~~Rps~~~i~~  276 (283)
T cd05080         261 WETEAKFRPTFRSLIP  276 (283)
T ss_pred             hccChhhCCCHHHHHH
Confidence            9999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.3e-34  Score=266.43  Aligned_cols=218  Identities=22%  Similarity=0.327  Sum_probs=169.0

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-hhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ...|++.++||.|+||.||+|.+.. ++.+|+|++..... ..+.+..|+.+++.++|+++....               
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            3569999999999999999999977 88899999976543 456688899999999998873311               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++++|||              
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g--------------  149 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFG--------------  149 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEcccc--------------
Confidence                          1246788899999999999999999999999999999999876655555554              


Q ss_pred             CCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                                   .+.......   ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+.+..
T Consensus       150 -------------~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~  216 (261)
T cd05148         150 -------------LARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQ  216 (261)
T ss_pred             -------------chhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence                         443222111   11235667999999988889999999999999999998 8999987765555443


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.....                                                 .......+..+.+++.+||+.||++
T Consensus       217 ~~~~~~-------------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~  247 (261)
T cd05148         217 ITAGYR-------------------------------------------------MPCPAKCPQEIYKIMLECWAAEPED  247 (261)
T ss_pred             HHhCCc-------------------------------------------------CCCCCCCCHHHHHHHHHHcCCCchh
Confidence            322100                                                 0011234668899999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      |||+.++++
T Consensus       248 Rpt~~~l~~  256 (261)
T cd05148         248 RPSFKALRE  256 (261)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-34  Score=262.49  Aligned_cols=213  Identities=31%  Similarity=0.517  Sum_probs=167.9

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      ||.|+||.||++.+..+++.||+|+++....    ..+.+..|+.+++.+.|+++....                     
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            7999999999999988899999999865332    345678899999999998762210                     


Q ss_pred             ------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          155 ------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       155 ------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                            ...+++..+..++.||+.||.|||+++++|+||||+||+++.++                           .++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~---------------------------~~~  133 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG---------------------------HIK  133 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC---------------------------cEE
Confidence                  12578899999999999999999999999999999999997655                           456


Q ss_pred             eccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 015532          229 LIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP  305 (405)
Q Consensus       229 l~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p  305 (405)
                      |+|||.+......   .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+.+.     
T Consensus       134 l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----  208 (250)
T cd05123         134 LTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD-----  208 (250)
T ss_pred             EeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-----
Confidence            6666665543322   23346788999999998888899999999999999999999999776653333322210     


Q ss_pred             hHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH---HH
Q 015532          306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA---RE  382 (405)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta---~e  382 (405)
                                         ..                          ......+..+.++|.+||..||++|||+   ++
T Consensus       209 -------------------~~--------------------------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~  243 (250)
T cd05123         209 -------------------PL--------------------------RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEE  243 (250)
T ss_pred             -------------------CC--------------------------CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHH
Confidence                               00                          1112235688999999999999999999   99


Q ss_pred             HHcCCCC
Q 015532          383 ALRHPFF  389 (405)
Q Consensus       383 lL~hp~f  389 (405)
                      +++||||
T Consensus       244 l~~~~~f  250 (250)
T cd05123         244 IKAHPFF  250 (250)
T ss_pred             HHhCCCC
Confidence            9999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.5e-34  Score=262.93  Aligned_cols=216  Identities=19%  Similarity=0.304  Sum_probs=168.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      +.|++.+.||.|+||.||+|...  ++.||||.++......+.+..|+.+++.+.|+++....                 
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            46899999999999999999875  78899999976555566788999999999998863211                 


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.                       
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~-----------------------  140 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLV-----------------------  140 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCC-----------------------
Confidence                        114788899999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 015532          223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~  301 (405)
                          ++|+|||.+...........++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+....
T Consensus       141 ----~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~  216 (256)
T cd05039         141 ----AKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY  216 (256)
T ss_pred             ----EEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC
Confidence                566666655544332222334567999999988889999999999999999997 999997765544332221100


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                                             .                          .......++.+.++|.+||..+|++|||+.
T Consensus       217 -----------------------~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  247 (256)
T cd05039         217 -----------------------R--------------------------MEAPEGCPPEVYKVMKDCWELDPAKRPTFK  247 (256)
T ss_pred             -----------------------C--------------------------CCCccCCCHHHHHHHHHHhccChhhCcCHH
Confidence                                   0                          001123467899999999999999999999


Q ss_pred             HHHc
Q 015532          382 EALR  385 (405)
Q Consensus       382 elL~  385 (405)
                      ++++
T Consensus       248 ~l~~  251 (256)
T cd05039         248 QLRE  251 (256)
T ss_pred             HHHH
Confidence            9986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=3e-34  Score=267.09  Aligned_cols=218  Identities=22%  Similarity=0.265  Sum_probs=162.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc----EEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      +.|++.+.||+|+||+||+|.+..+++    .|++|.+....  .....+..|+.++..+.|+++....           
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            468999999999999999999877765    47777775322  2234566788889999999873311           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++|++||||||+|||++.++.                   
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~-------------------  147 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSI-------------------  147 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc-------------------
Confidence                            134678899999999999999999999999999999999976654                   


Q ss_pred             cCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                              +||+|||.+......     .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.....
T Consensus       148 --------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  219 (279)
T cd05111         148 --------VQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE  219 (279)
T ss_pred             --------EEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                    455555555432211     112346778999999998889999999999999999998 999998765443


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+..                       +....                          .....+.++.+++.+||..
T Consensus       220 ~~~~~~~-----------------------~~~~~--------------------------~~~~~~~~~~~li~~c~~~  250 (279)
T cd05111         220 VPDLLEK-----------------------GERLA--------------------------QPQICTIDVYMVMVKCWMI  250 (279)
T ss_pred             HHHHHHC-----------------------CCcCC--------------------------CCCCCCHHHHHHHHHHcCC
Confidence            3222211                       00000                          0112345778999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      ||++|||+.|+++
T Consensus       251 ~p~~Rps~~el~~  263 (279)
T cd05111         251 DENVRPTFKELAN  263 (279)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999986

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2.3e-34  Score=269.83  Aligned_cols=225  Identities=22%  Similarity=0.344  Sum_probs=166.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC----------------cEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCC
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK----------------ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~----------------~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~  153 (405)
                      ++|++.++||+|+||.||+|.+..++                ..||+|++....  ...+.+.+|+++++.+.|+++...
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            57999999999999999999876543                568999986532  345677889999999999986321


Q ss_pred             c---------------------------c-----------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe
Q 015532          154 R---------------------------Y-----------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  195 (405)
Q Consensus       154 ~---------------------------~-----------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~  195 (405)
                      .                           .           ..+++..++.++.|++.||.|||++||+||||||+||+++
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~  164 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVG  164 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeec
Confidence            0                           0           1478889999999999999999999999999999999998


Q ss_pred             cccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHH
Q 015532          196 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWS  270 (405)
Q Consensus       196 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  270 (405)
                      .++.+                           +|+|||.+......     .....++..|+|||++.+..++.++||||
T Consensus       165 ~~~~~---------------------------~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s  217 (296)
T cd05051         165 KNYTI---------------------------KIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWA  217 (296)
T ss_pred             CCCce---------------------------EEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhh
Confidence            76655                           45555544322111     11234577899999999888999999999


Q ss_pred             HHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccch
Q 015532          271 VGCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP  348 (405)
Q Consensus       271 lG~il~~llt--g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (405)
                      |||++|+|++  |..||......+.+..+......                   ...                       
T Consensus       218 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~-------------------~~~-----------------------  255 (296)
T cd05051         218 FGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRD-------------------DGR-----------------------  255 (296)
T ss_pred             hHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccc-------------------ccc-----------------------
Confidence            9999999998  77888766555544333221100                   000                       


Q ss_pred             hhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       349 ~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      ..........+.++.+|+.+||+.||++|||+.|+++
T Consensus       256 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         256 QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            0000011234568999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=6.4e-34  Score=261.95  Aligned_cols=219  Identities=24%  Similarity=0.359  Sum_probs=166.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..++|++.++||+|+||.||++.+. .+..||+|.+.......+.+.+|+++++.+.|+++....               
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~   82 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFM   82 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeC
Confidence            3578999999999999999999865 445699999876555567788999999999998873211               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||+.|++|+||||+||+++..+.++++|                 
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d-----------------  145 (260)
T cd05073          83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD-----------------  145 (260)
T ss_pred             CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECC-----------------
Confidence                         12356778889999999999999999999999999999997766555555                 


Q ss_pred             CCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                                ||.+.......    ....++..|+|||++.+..++.++|+|||||++|++++ |..||.+.+..+....
T Consensus       146 ----------~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~  215 (260)
T cd05073         146 ----------FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA  215 (260)
T ss_pred             ----------CcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence                      44443221111    11235567999999988889999999999999999998 9999987665444333


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+...                                                 .......+.++.+++.+||+.||++
T Consensus       216 ~~~~~~-------------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~  246 (260)
T cd05073         216 LERGYR-------------------------------------------------MPRPENCPEELYNIMMRCWKNRPEE  246 (260)
T ss_pred             HhCCCC-------------------------------------------------CCCcccCCHHHHHHHHHHcccCccc
Confidence            221100                                                 0011234568999999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      ||++.++++
T Consensus       247 Rp~~~~l~~  255 (260)
T cd05073         247 RPTFEYIQS  255 (260)
T ss_pred             CcCHHHHHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=4e-34  Score=262.59  Aligned_cols=213  Identities=22%  Similarity=0.335  Sum_probs=166.3

Q ss_pred             eeeecccceeEEEEEecCC---CcEEEEEEecchhhh--hHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~~~~--~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|.+...   +..||+|+++.....  .+.+..|+.++..+.|+++....                  
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4799999999999999865   889999999754332  56788899999999988763211                  


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~----------------  144 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVV----------------  144 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcE----------------
Confidence                              1557899999999999999999999999999999999999876654                


Q ss_pred             cccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~  290 (405)
                                 +|+|||.+......     .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.....
T Consensus       145 -----------~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~  213 (262)
T cd00192         145 -----------KISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN  213 (262)
T ss_pred             -----------EEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence                       55555554433221     122457888999999998889999999999999999999 6999988765


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+....+...  .                     .                          ......++.++.+++.+||
T Consensus       214 ~~~~~~~~~~--~---------------------~--------------------------~~~~~~~~~~~~~li~~~l  244 (262)
T cd00192         214 EEVLEYLRKG--Y---------------------R--------------------------LPKPEYCPDELYELMLSCW  244 (262)
T ss_pred             HHHHHHHHcC--C---------------------C--------------------------CCCCccCChHHHHHHHHHc
Confidence            5544433220  0                     0                          0112234678999999999


Q ss_pred             ccCCCCCCCHHHHHcC
Q 015532          371 RYDPAERLKAREALRH  386 (405)
Q Consensus       371 ~~dP~~Rpta~elL~h  386 (405)
                      ..||++|||+.|++++
T Consensus       245 ~~~p~~Rps~~~l~~~  260 (262)
T cd00192         245 QLDPEDRPTFSELVER  260 (262)
T ss_pred             cCCcccCcCHHHHHHh
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=4.9e-34  Score=270.06  Aligned_cols=262  Identities=20%  Similarity=0.249  Sum_probs=169.1

Q ss_pred             eeecc--cceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           99 KMGEG--TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        99 ~LG~G--~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +||+|  ++|.||++++..+++.||||+++..   ....+.+..|+++++.+.|+++....                   
T Consensus         5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            34444  4566677777778999999998653   23445688899999999999873211                   


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++..++.++.||+.||.|||++||+||||||+||+++.++.++++||+.+......+..       
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~-------  157 (314)
T cd08216          85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR-------  157 (314)
T ss_pred             CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc-------
Confidence                      124678889999999999999999999999999999999998887777777654322111000       


Q ss_pred             CCceeccCCCCccccCCccceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                       .         ...........++..|+|||++.+.  .++.++|||||||++|+|++|..||........+  +.+..+
T Consensus       158 -~---------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~--~~~~~~  225 (314)
T cd08216         158 -Q---------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML--LEKVRG  225 (314)
T ss_pred             -c---------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhc
Confidence             0         0000011223577889999999763  5889999999999999999999999876544332  222223


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                      ..+..+....      +......  ............      .............+.++.+|+.+||++||++|||++|
T Consensus       226 ~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  291 (314)
T cd08216         226 TVPCLLDKST------YPLYEDS--MSQSRSSNEHPN------NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQ  291 (314)
T ss_pred             cCccccccCc------hhhhcCC--cCcccccccccc------hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHH
Confidence            2221110000      0000000  000000000000      0000001111234668999999999999999999999


Q ss_pred             HHcCCCCCCCC
Q 015532          383 ALRHPFFTRDV  393 (405)
Q Consensus       383 lL~hp~f~~~~  393 (405)
                      +|+||||++..
T Consensus       292 ll~~p~~~~~~  302 (314)
T cd08216         292 LLNHSFFKQCK  302 (314)
T ss_pred             HhcCchHhhhc
Confidence            99999998754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.9e-34  Score=262.84  Aligned_cols=212  Identities=24%  Similarity=0.338  Sum_probs=161.4

Q ss_pred             eeeecccceeEEEEEecCCC---cEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKK---ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~---~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      ++||+|+||.||+|.+..++   ..||+|.+.....  ..+.+..|+++++.+.|+++....                  
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            47999999999999876554   7899999875443  456788899999999998863211                  


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..+..++.|++.||.|||.+|++|+||||+|||++.++.++++|||                    
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~--------------------  140 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFG--------------------  140 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEecccc--------------------
Confidence                    1247888999999999999999999999999999999999877655555554                    


Q ss_pred             ceeccCCCCccccCCcc------ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 015532          227 IKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER  299 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~  299 (405)
                             .+........      ...++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+.+
T Consensus       141 -------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~  213 (257)
T cd05060         141 -------MSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES  213 (257)
T ss_pred             -------ccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc
Confidence                   4432221111      1123567999999998889999999999999999998 9999987665444333321


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ..                       .                          .......+..+.++|.+||..||++|||
T Consensus       214 ~~-----------------------~--------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~  244 (257)
T cd05060         214 GE-----------------------R--------------------------LPRPEECPQEIYSIMLSCWKYRPEDRPT  244 (257)
T ss_pred             CC-----------------------c--------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            10                       0                          0111234668899999999999999999


Q ss_pred             HHHHHc
Q 015532          380 AREALR  385 (405)
Q Consensus       380 a~elL~  385 (405)
                      +.++++
T Consensus       245 ~~~l~~  250 (257)
T cd05060         245 FSELES  250 (257)
T ss_pred             HHHHHH
Confidence            999985

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=2e-35  Score=286.79  Aligned_cols=174  Identities=29%  Similarity=0.423  Sum_probs=149.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..+...+.||+|+||.||+++++.+|+.||||.++..  ....+...+|+++|++|+|+||+...               
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence            4477789999999999999999999999999999753  34568888999999999999984321               


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++.++..++.++..||.|||++|||||||||.||++-...               
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge---------------  157 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE---------------  157 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC---------------
Confidence                                 23579999999999999999999999999999999999985422               


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                              +.....||+|||.|+..+++.  .+++||..|.+||++.. ..|+..+|.|||||++|+++||..||...
T Consensus       158 --------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  158 --------DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             --------CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence                    234568999999999877665  45799999999999995 78999999999999999999999999643

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=3.8e-34  Score=268.05  Aligned_cols=219  Identities=20%  Similarity=0.335  Sum_probs=164.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCC----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGT----------  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~----------  153 (405)
                      ++|++.+.||+|+||.||++.+...     ...||+|+++...  .....+.+|+++++.+ .|+++...          
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   91 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL   91 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence            6799999999999999999998643     3789999986432  2335577899999999 68876321          


Q ss_pred             ---------------------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccc
Q 015532          154 ---------------------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       154 ---------------------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~  200 (405)
                                                       ....+++..++.++.||+.||.|||++||+||||||+||+++.++. 
T Consensus        92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~-  170 (293)
T cd05053          92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHV-  170 (293)
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCe-
Confidence                                             0134677888999999999999999999999999999999977664 


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHH
Q 015532          201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  275 (405)
Q Consensus       201 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  275 (405)
                                                ++|+|||.+.......     ....++..|+|||++.+..++.++|||||||++
T Consensus       171 --------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  224 (293)
T cd05053         171 --------------------------MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL  224 (293)
T ss_pred             --------------------------EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHH
Confidence                                      4555555554332211     112345679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhc
Q 015532          276 VELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  354 (405)
Q Consensus       276 ~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (405)
                      |+|++ |..||.+....+....+....                       ..                          ..
T Consensus       225 ~el~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~~--------------------------~~  255 (293)
T cd05053         225 WEIFTLGGSPYPGIPVEELFKLLKEGY-----------------------RM--------------------------EK  255 (293)
T ss_pred             HHHhcCCCCCCCCCCHHHHHHHHHcCC-----------------------cC--------------------------CC
Confidence            99997 999998766544433221100                       00                          01


Q ss_pred             ccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       355 ~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ....+..+.+|+.+||..||++|||+.|++++
T Consensus       256 ~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         256 PQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            12335688999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.3e-34  Score=264.22  Aligned_cols=219  Identities=22%  Similarity=0.343  Sum_probs=165.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      .++|++.+.||+|+||.||+|.+...     +..||+|.+....  .....+.+|+.+++.+.|+++....         
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            36799999999999999999998643     3789999986432  2345677899999999998873211         


Q ss_pred             ----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcc
Q 015532          155 ----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       155 ----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                                                  ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+      
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~------  158 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTV------  158 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCE------
Confidence                                        0124567888899999999999999999999999999999876655      


Q ss_pred             ccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-
Q 015532          207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-  280 (405)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-  280 (405)
                                           +|+|||++......     .....++..|+|||.+.+..++.++|||||||++|++++ 
T Consensus       159 ---------------------kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~  217 (277)
T cd05032         159 ---------------------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATL  217 (277)
T ss_pred             ---------------------EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhcc
Confidence                                 45555544322111     112346778999999988889999999999999999998 


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+.+..+....+..  +.                     ..                          ..+...+.
T Consensus       218 g~~p~~~~~~~~~~~~~~~--~~---------------------~~--------------------------~~~~~~~~  248 (277)
T cd05032         218 AEQPYQGLSNEEVLKFVID--GG---------------------HL--------------------------DLPENCPD  248 (277)
T ss_pred             CCCCCccCCHHHHHHHHhc--CC---------------------CC--------------------------CCCCCCCH
Confidence            9999987665554433221  00                     00                          01123356


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHc
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .+.+|+.+||+.+|++|||+.++++
T Consensus       249 ~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         249 KLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHH
Confidence            8899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3e-34  Score=275.04  Aligned_cols=220  Identities=23%  Similarity=0.350  Sum_probs=160.0

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh--hhhHHHHHHHHHHHHHh-hcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~-~~~~~~~~---------  154 (405)
                      ++|++.+.||+|+||.||+|.+.     .+++.||||+++...  .....+.+|+.++.++. |+++....         
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            67999999999999999999853     457889999996532  23456778999999995 45542110         


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence                                                                                            


Q ss_pred             ------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          155 ------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       155 ------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                            ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                           ++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~---------------------------~k  219 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNV---------------------------VK  219 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCc---------------------------EE
Confidence                  012456677889999999999999999999999999999976654                           45


Q ss_pred             eccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 015532          229 LIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       229 l~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g  302 (405)
                      |+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||........+.....   
T Consensus       220 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---  296 (343)
T cd05103         220 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK---  296 (343)
T ss_pred             EEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh---
Confidence            55555544321111     11235667999999998889999999999999999997 9999976543222111100   


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                                         .+....                          .....++.+.+++.+||+.||++|||+.|
T Consensus       297 -------------------~~~~~~--------------------------~~~~~~~~~~~~~~~cl~~~p~~Rps~~e  331 (343)
T cd05103         297 -------------------EGTRMR--------------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSE  331 (343)
T ss_pred             -------------------ccCCCC--------------------------CCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence                               000000                          01123557899999999999999999999


Q ss_pred             HHcC
Q 015532          383 ALRH  386 (405)
Q Consensus       383 lL~h  386 (405)
                      +++|
T Consensus       332 il~~  335 (343)
T cd05103         332 LVEH  335 (343)
T ss_pred             HHHH
Confidence            9976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=4.3e-34  Score=267.38  Aligned_cols=227  Identities=28%  Similarity=0.424  Sum_probs=167.5

Q ss_pred             CeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHh-hcCCCCCc---------
Q 015532           93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTR---------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~-~~~~~~~~---------  154 (405)
                      .|++.+.||+|+||.||+|++.   .+|+.||+|+++...     ...+.+..|+++++.+. |+++....         
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4889999999999999999875   478899999986432     23456778999999996 55542211         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++|++||||||+|||++.++.                 
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~-----------------  143 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGH-----------------  143 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCC-----------------
Confidence                              124678888999999999999999999999999999999976654                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                ++|+|||++......    .....|+..|+|||.+.+.  .++.++|||||||++|+|++|..||.....
T Consensus       144 ----------~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~  213 (290)
T cd05613         144 ----------VVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE  213 (290)
T ss_pred             ----------EEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc
Confidence                      455555554432211    1124688899999998753  467899999999999999999999964332


Q ss_pred             HHHHHHHHH-HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          291 LEHLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       291 ~~~~~~i~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ......+.+ .....                                               .......+..+.+|+.+|
T Consensus       214 ~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~ll~~~  246 (290)
T cd05613         214 KNSQAEISRRILKSE-----------------------------------------------PPYPQEMSALAKDIIQRL  246 (290)
T ss_pred             cccHHHHHHHhhccC-----------------------------------------------CCCCccCCHHHHHHHHHH
Confidence            211111111 00000                                               001123466889999999


Q ss_pred             cccCCCCCC-----CHHHHHcCCCCCCCC
Q 015532          370 LRYDPAERL-----KAREALRHPFFTRDV  393 (405)
Q Consensus       370 L~~dP~~Rp-----ta~elL~hp~f~~~~  393 (405)
                      |+.||++|+     +++++++||||+...
T Consensus       247 l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         247 LMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             hcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            999999997     899999999998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=7.6e-34  Score=264.27  Aligned_cols=219  Identities=20%  Similarity=0.266  Sum_probs=166.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC----CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~----~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .++|++.+.||+|+||.||+|.+..    ++..||+|+++..  ....+.+.+|+.+++.+.|+++....          
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            3679999999999999999999876    3578999988643  23356678899999999999873210          


Q ss_pred             ---------------------c-----ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccc
Q 015532          155 ---------------------Y-----RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  208 (405)
Q Consensus       155 ---------------------~-----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~  208 (405)
                                           .     ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+        
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~--------  156 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQV--------  156 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcE--------
Confidence                                 0     346788899999999999999999999999999999999766544        


Q ss_pred             ccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CC
Q 015532          209 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  282 (405)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~  282 (405)
                                         +|+|||+++......     ....++..|+|||++.+..++.++|||||||++|++++ |.
T Consensus       157 -------------------kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~  217 (280)
T cd05043         157 -------------------KITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQ  217 (280)
T ss_pred             -------------------EECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCC
Confidence                               555555544321111     11235667999999998889999999999999999999 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||...+..+....+....                       ..                          .....+++++
T Consensus       218 ~p~~~~~~~~~~~~~~~~~-----------------------~~--------------------------~~~~~~~~~~  248 (280)
T cd05043         218 TPYVEIDPFEMAAYLKDGY-----------------------RL--------------------------AQPINCPDEL  248 (280)
T ss_pred             CCcCcCCHHHHHHHHHcCC-----------------------CC--------------------------CCCCcCCHHH
Confidence            9998765544332221100                       00                          0112335688


Q ss_pred             HHHHHHccccCCCCCCCHHHHHc
Q 015532          363 IDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .+++.+||..||++|||+.++++
T Consensus       249 ~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         249 FAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HHHHHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.3e-34  Score=266.26  Aligned_cols=218  Identities=22%  Similarity=0.336  Sum_probs=165.4

Q ss_pred             eeeecccceeEEEEEecCCCc-------EEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKE-------LVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~-------~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.||+|+||.||+|.+...+.       .||+|.+.... ...+.+..|+.+++.+.|+++....               
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            469999999999999865543       48888875433 3345677899999999999873321               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+||+++.++..++.+++               
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~---------------  145 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPP---------------  145 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCc---------------
Confidence                         1246888899999999999999999999999999999999988766666554               


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG-EALFQTHENLEHLAMMER  299 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg-~~pf~~~~~~~~~~~i~~  299 (405)
                          .++++|||.+..... .....++..|+|||++.+. .++.++|||||||++|+|++| ..||...+..........
T Consensus       146 ----~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~  220 (258)
T cd05078         146 ----FIKLSDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED  220 (258)
T ss_pred             ----eEEecccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc
Confidence                378999998865443 2335788999999999874 578999999999999999998 566655443322111100


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                                               +.                          ..+...+.++.+||.+||+.||++|||
T Consensus       221 -------------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps  249 (258)
T cd05078         221 -------------------------RH--------------------------QLPAPKWTELANLINQCMDYEPDFRPS  249 (258)
T ss_pred             -------------------------cc--------------------------cCCCCCcHHHHHHHHHHhccChhhCCC
Confidence                                     00                          011122457889999999999999999


Q ss_pred             HHHHHcC
Q 015532          380 AREALRH  386 (405)
Q Consensus       380 a~elL~h  386 (405)
                      ++++++.
T Consensus       250 ~~~il~~  256 (258)
T cd05078         250 FRAIIRD  256 (258)
T ss_pred             HHHHHHh
Confidence            9999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.3e-34  Score=267.51  Aligned_cols=225  Identities=22%  Similarity=0.291  Sum_probs=165.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC--------------cEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK--------------ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~--------------~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-  154 (405)
                      ++|++.++||+|+||.||+|++..++              ..||||+++..  ....+.+.+|+++++++.|+++.... 
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            57999999999999999999875432              35999998653  23345688899999999999873211 


Q ss_pred             --------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEec
Q 015532          155 --------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  196 (405)
Q Consensus       155 --------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~  196 (405)
                                                            ...+++..+..++.|++.||.|||++|++||||||+||+++.
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~  164 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN  164 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence                                                  012567788899999999999999999999999999999976


Q ss_pred             ccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHH
Q 015532          197 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSV  271 (405)
Q Consensus       197 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  271 (405)
                      ++.                           +||+|||++.......     ....++..|+|||++.+..++.++|||||
T Consensus       165 ~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSl  217 (295)
T cd05097         165 HYT---------------------------IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAF  217 (295)
T ss_pred             CCc---------------------------EEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHH
Confidence            654                           4555555543321111     11245678999999998889999999999


Q ss_pred             HHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchh
Q 015532          272 GCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  349 (405)
Q Consensus       272 G~il~~llt--g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (405)
                      ||++|+|++  |..||...+..+.+..+.+....                   .....                      
T Consensus       218 G~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~~----------------------  256 (295)
T cd05097         218 GVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRN-------------------QGRQI----------------------  256 (295)
T ss_pred             HHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhh-------------------ccccc----------------------
Confidence            999999988  67888876665544433221100                   00000                      


Q ss_pred             hhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       350 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                       ........++.+.+|+.+||+.||++|||++++++
T Consensus       257 -~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         257 -YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             -cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence             00111234568999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=7.4e-34  Score=267.53  Aligned_cols=220  Identities=24%  Similarity=0.395  Sum_probs=164.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~--------  154 (405)
                      .++|++.+.||+|+||.||+|.+.     .++..||||+++..  ....+.+..|+++++++ .|+++....        
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            357999999999999999999853     34568999998653  23345678899999999 688874211        


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++.++..++.||+.||.|||++||+|+||||+|||++.++.+             
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~-------------  180 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIV-------------  180 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeE-------------
Confidence                                 1126888999999999999999999999999999999999766544             


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT  287 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~  287 (405)
                                    +|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus       181 --------------~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~  246 (302)
T cd05055         181 --------------KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG  246 (302)
T ss_pred             --------------EECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCC
Confidence                          555555544322111     11245678999999998889999999999999999998 9999977


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      ....+........                      +..                          .......++.+.+|+.
T Consensus       247 ~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~~~li~  278 (302)
T cd05055         247 MPVDSKFYKLIKE----------------------GYR--------------------------MAQPEHAPAEIYDIMK  278 (302)
T ss_pred             CCchHHHHHHHHc----------------------CCc--------------------------CCCCCCCCHHHHHHHH
Confidence            5543322211110                      000                          0011233568999999


Q ss_pred             HccccCCCCCCCHHHHHc
Q 015532          368 GLLRYDPAERLKAREALR  385 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~  385 (405)
                      +||..+|++|||+.|+++
T Consensus       279 ~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         279 TCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHcCCCchhCcCHHHHHH
Confidence            999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=6.2e-34  Score=261.21  Aligned_cols=218  Identities=22%  Similarity=0.329  Sum_probs=166.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ..|++.+.||+|+||.||+|.+. .+..+|+|+++........+..|+++++.+.|+++....                 
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            35899999999999999999885 466799999876554456788899999999998873211                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.|++.||.|||++|++|+||||+||+++.++.+                       
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~-----------------------  139 (256)
T cd05112          83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVV-----------------------  139 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeE-----------------------
Confidence                       1246788899999999999999999999999999999999766544                       


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                          +|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||........+..+.
T Consensus       140 ----~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  215 (256)
T cd05112         140 ----KVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN  215 (256)
T ss_pred             ----EECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHh
Confidence                555555443221111    11234568999999998889999999999999999998 999998766554443332


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .....                                                 ......+..+.+|+.+||+.+|++||
T Consensus       216 ~~~~~-------------------------------------------------~~~~~~~~~~~~l~~~~l~~~p~~Rp  246 (256)
T cd05112         216 AGFRL-------------------------------------------------YKPRLASQSVYELMQHCWKERPEDRP  246 (256)
T ss_pred             CCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcccChhhCC
Confidence            11000                                                 00112356889999999999999999


Q ss_pred             CHHHHHcC
Q 015532          379 KAREALRH  386 (405)
Q Consensus       379 ta~elL~h  386 (405)
                      |+.+++++
T Consensus       247 ~~~~~l~~  254 (256)
T cd05112         247 SFSLLLHQ  254 (256)
T ss_pred             CHHHHHHh
Confidence            99999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.3e-33  Score=260.45  Aligned_cols=219  Identities=28%  Similarity=0.445  Sum_probs=165.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..    ....+.+.+|+++++++.|+++....             
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5799999999999999999999989999999988532    22356678899999999998762211             


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~----------------  145 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVV----------------  145 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcE----------------
Confidence                              1236788899999999999999999999999999999999876654                


Q ss_pred             cccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH--
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL--  291 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~--  291 (405)
                                 +|+|||.+......   .....++..|+|||.+.+..++.++|+|||||++|+|++|..||......  
T Consensus       146 -----------~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  214 (267)
T cd08224         146 -----------KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY  214 (267)
T ss_pred             -----------EEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence                       55555544332211   12246788999999999888999999999999999999999999654311  


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+..  +..+                     ..                         .....+..+.++|.+||.
T Consensus       215 ~~~~~~~~--~~~~---------------------~~-------------------------~~~~~~~~~~~~i~~cl~  246 (267)
T cd08224         215 SLCKKIEK--CDYP---------------------PL-------------------------PADHYSEELRDLVSRCIN  246 (267)
T ss_pred             HHHhhhhc--CCCC---------------------CC-------------------------ChhhcCHHHHHHHHHHcC
Confidence            11111110  0000                     00                         001335678999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .+|++|||+.++++
T Consensus       247 ~~p~~Rp~~~~il~  260 (267)
T cd08224         247 PDPEKRPDISYVLQ  260 (267)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=5.5e-34  Score=261.43  Aligned_cols=215  Identities=20%  Similarity=0.299  Sum_probs=165.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      +.|++.+.||+|+||.||++..  +++.||+|+++.. ...+.+.+|+.+++.+.|+++....                 
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~   82 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD-VTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSK   82 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc-chHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCC
Confidence            4699999999999999999874  6778999998653 2346788899999999999873211                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.|++.||.|||++|++||||||+||+++.++.                        
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~------------------------  138 (254)
T cd05083          83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGV------------------------  138 (254)
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCc------------------------
Confidence                       123678888999999999999999999999999999999976554                        


Q ss_pred             CCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 015532          224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g  302 (405)
                         ++|+|||++............+..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+....+.+.. 
T Consensus       139 ---~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-  214 (254)
T cd05083         139 ---AKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY-  214 (254)
T ss_pred             ---EEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC-
Confidence               556666655433222222334567999999988889999999999999999997 999998766544333222110 


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                                            ..                          .....++..+.+|+.+||+.+|++||++++
T Consensus       215 ----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  246 (254)
T cd05083         215 ----------------------RM--------------------------EPPEGCPADVYVLMTSCWETEPKKRPSFHK  246 (254)
T ss_pred             ----------------------CC--------------------------CCCCcCCHHHHHHHHHHcCCChhhCcCHHH
Confidence                                  00                          011234668899999999999999999999


Q ss_pred             HHc
Q 015532          383 ALR  385 (405)
Q Consensus       383 lL~  385 (405)
                      +++
T Consensus       247 l~~  249 (254)
T cd05083         247 LRE  249 (254)
T ss_pred             HHH
Confidence            986

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=6.4e-34  Score=266.26  Aligned_cols=217  Identities=18%  Similarity=0.330  Sum_probs=163.3

Q ss_pred             CeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      +|++.+.||+|+||.||+|++..     ....+|+|.+....  .....+.+|+++++.+.|+++....           
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            47889999999999999998753     23579999886432  2345678899999999999873311           


Q ss_pred             ----------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEE
Q 015532          155 ----------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  194 (405)
Q Consensus       155 ----------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli  194 (405)
                                                              ...+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence                                                    0135677889999999999999999999999999999999


Q ss_pred             ecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHH
Q 015532          195 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLW  269 (405)
Q Consensus       195 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diw  269 (405)
                      +.++.                           ++|+|||++.......     ....++..|+|||.+.+..++.++|||
T Consensus       161 ~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  213 (290)
T cd05045         161 AEGRK---------------------------MKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVW  213 (290)
T ss_pred             cCCCc---------------------------EEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence            76554                           4555555554322111     112456789999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccch
Q 015532          270 SVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP  348 (405)
Q Consensus       270 SlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (405)
                      ||||++|+|++ |..||.+.........+.+..                       .                       
T Consensus       214 slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----------------------~-----------------------  247 (290)
T cd05045         214 SFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY-----------------------R-----------------------  247 (290)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-----------------------C-----------------------
Confidence            99999999998 999998765544333221100                       0                       


Q ss_pred             hhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       349 ~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                         .......+.++.+|+.+||+.||++||++.++++
T Consensus       248 ---~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         248 ---MERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             ---CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence               0011234668999999999999999999999985

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.1e-33  Score=261.42  Aligned_cols=218  Identities=22%  Similarity=0.312  Sum_probs=165.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc---EEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|+..+.||+|+||.||+|++..+++   .||+|.++..  ....+.+..|+++++.+.|+++....            
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            468999999999999999999876554   7999998643  23356678899999999999862211            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.|++.||+|||++||+||||||+||+++.++.+                  
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~------------------  146 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLEC------------------  146 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcE------------------
Confidence                            1346788999999999999999999999999999999999766554                  


Q ss_pred             cCCCCCCCceeccCCCCccccCCcc------ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  291 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~  291 (405)
                               +|+|||++........      ....+..|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus       147 ---------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~  217 (268)
T cd05063         147 ---------KVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH  217 (268)
T ss_pred             ---------EECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH
Confidence                     5555554433221110      0123457999999998889999999999999999997 99999876655


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+.... ..|                                                .....+..+.+|+.+||+
T Consensus       218 ~~~~~i~~~~-~~~------------------------------------------------~~~~~~~~~~~li~~c~~  248 (268)
T cd05063         218 EVMKAINDGF-RLP------------------------------------------------APMDCPSAVYQLMLQCWQ  248 (268)
T ss_pred             HHHHHHhcCC-CCC------------------------------------------------CCCCCCHHHHHHHHHHcC
Confidence            5444432210 100                                                012345688999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .||++||++.++++
T Consensus       249 ~~p~~Rp~~~~i~~  262 (268)
T cd05063         249 QDRARRPRFVDIVN  262 (268)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.6e-33  Score=264.35  Aligned_cols=226  Identities=22%  Similarity=0.307  Sum_probs=163.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC----------------CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCC
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG  152 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~  152 (405)
                      .++|++.++||+|+||.||+|.+..                ++..||+|+++..  ......+.+|+++++.+.|+++..
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3579999999999999999986532                3457999998643  234567889999999999998732


Q ss_pred             Cc--------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEE
Q 015532          153 TR--------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  194 (405)
Q Consensus       153 ~~--------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli  194 (405)
                      ..                                      ...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence            11                                      0124566899999999999999999999999999999999


Q ss_pred             ecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHH
Q 015532          195 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLW  269 (405)
Q Consensus       195 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diw  269 (405)
                      +.++.                           ++|+|||++.......     ....++..|++||...+..++.++|||
T Consensus       164 ~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw  216 (296)
T cd05095         164 GKNYT---------------------------IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVW  216 (296)
T ss_pred             cCCCC---------------------------EEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence            76554                           4555555554322111     112346789999999888899999999


Q ss_pred             HHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc
Q 015532          270 SVGCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  347 (405)
Q Consensus       270 SlG~il~~llt--g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (405)
                      ||||++|||++  |..||...+..+.........                  ........                    
T Consensus       217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~------------------~~~~~~~~--------------------  258 (296)
T cd05095         217 AFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFF------------------RDQGRQVY--------------------  258 (296)
T ss_pred             HHHHHHHHHHHhCCCCCccccChHHHHHHHHHHH------------------hhcccccc--------------------
Confidence            99999999998  778997665544433221110                  00000000                    


Q ss_pred             hhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       348 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                          ......+++.+.+|+.+||+.||++|||+.++++
T Consensus       259 ----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         259 ----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                0011234568899999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=8.1e-34  Score=267.86  Aligned_cols=220  Identities=20%  Similarity=0.317  Sum_probs=163.4

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC-------CCcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------  154 (405)
                      .++|.+.+.||+|+||.||+|++..       +...||+|+++..  ......+..|+++++.+ .|+++....      
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            3679999999999999999998643       2356999999753  23345677899999999 677752210      


Q ss_pred             -------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          155 -------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       155 -------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                                                           ...+++.++..++.||+.||+|||++|++||||||+||+++.+
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~  176 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED  176 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence                                                 0236778899999999999999999999999999999999766


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                      +.                           ++|+|||.+.......     ....++..|+|||++.+..++.++||||||
T Consensus       177 ~~---------------------------~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  229 (307)
T cd05098         177 NV---------------------------MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG  229 (307)
T ss_pred             Cc---------------------------EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHH
Confidence            54                           4555555554322111     111235679999999988899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|+|++ |..||.+....+....+....                       .                          
T Consensus       230 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~--------------------------  260 (307)
T cd05098         230 VLLWEIFTLGGSPYPGVPVEELFKLLKEGH-----------------------R--------------------------  260 (307)
T ss_pred             HHHHHHHcCCCCCCCcCCHHHHHHHHHcCC-----------------------C--------------------------
Confidence            99999998 899997765443333221100                       0                          


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .......+.++.+|+.+||..+|++|||+.+++++
T Consensus       261 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         261 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            01112346688999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.4e-33  Score=264.09  Aligned_cols=218  Identities=21%  Similarity=0.327  Sum_probs=165.3

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+|.+.+.||+|+||.||+|++.     .++..+++|.++... ...+.+.+|+++++++.|+++....           
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            45899999999999999999864     345679999986533 2345678899999999999873211           


Q ss_pred             --------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccccc
Q 015532          155 --------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       155 --------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~  202 (405)
                                                      ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+  
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~--  162 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLV--  162 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE--
Confidence                                            0226788899999999999999999999999999999999876654  


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHH
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE  277 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~  277 (405)
                                               +|+|||++......     .....++..|+|||++.+..++.++|||||||++|+
T Consensus       163 -------------------------~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  217 (291)
T cd05094         163 -------------------------KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE  217 (291)
T ss_pred             -------------------------EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHH
Confidence                                     55555554332211     112346788999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhccc
Q 015532          278 LCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  356 (405)
Q Consensus       278 llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (405)
                      |++ |..||......+....+...  ..+                                               ....
T Consensus       218 l~t~g~~p~~~~~~~~~~~~~~~~--~~~-----------------------------------------------~~~~  248 (291)
T cd05094         218 IFTYGKQPWFQLSNTEVIECITQG--RVL-----------------------------------------------ERPR  248 (291)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHhCC--CCC-----------------------------------------------CCCc
Confidence            998 99999776665543322110  000                                               0011


Q ss_pred             CchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          357 HSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       357 ~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      ..+..+.+|+.+||+.||++|||+.++++
T Consensus       249 ~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         249 VCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            23567899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.2e-33  Score=264.02  Aligned_cols=228  Identities=28%  Similarity=0.387  Sum_probs=165.9

Q ss_pred             CeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHh-hcCCCCCc---------
Q 015532           93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTR---------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~-~~~~~~~~---------  154 (405)
                      .|++.+.||+|+||.||+|++.   .+++.||||+++...     ...+.+..|+.++.++. |+++....         
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            3889999999999999999864   467889999986432     23345678999999995 55542110         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.|++.||.|||+.|++||||||+||+++.++.                 
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~-----------------  143 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGH-----------------  143 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC-----------------
Confidence                              134678889999999999999999999999999999999976554                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCC--CCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                ++|+|||++.......    ....|+..|+|||.+.+..  .+.++||||||+++|+|++|..||.....
T Consensus       144 ----------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~  213 (288)
T cd05583         144 ----------VVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE  213 (288)
T ss_pred             ----------EEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc
Confidence                      5556666554322111    1245888999999987754  78899999999999999999999964322


Q ss_pred             HHHHHHHHH-HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          291 LEHLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       291 ~~~~~~i~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ......+.+ ....                                               ........+..+.++|.+|
T Consensus       214 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~l~~li~~~  246 (288)
T cd05583         214 QNSQSEISRRILKS-----------------------------------------------KPPFPKTMSAEARDFIQKL  246 (288)
T ss_pred             cchHHHHHHHHHcc-----------------------------------------------CCCCCcccCHHHHHHHHHH
Confidence            111111111 0000                                               0001123456889999999


Q ss_pred             cccCCCCCCC---HHHHHcCCCCCCCCC
Q 015532          370 LRYDPAERLK---AREALRHPFFTRDVR  394 (405)
Q Consensus       370 L~~dP~~Rpt---a~elL~hp~f~~~~~  394 (405)
                      |+.||++|||   +.++|+||||+...+
T Consensus       247 l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         247 LEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             hcCCHhhccCcchHHHHhcCcccccCCH
Confidence            9999999998   577899999987543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1.2e-33  Score=263.17  Aligned_cols=218  Identities=21%  Similarity=0.328  Sum_probs=165.2

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+|.+.++||+|+||.||+|...     .++..+|+|.++... ...+.+.+|+++++.+.|+++....           
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            46889999999999999999753     356789999886433 3456788899999999999873211           


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+   
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~---  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV---  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE---
Confidence                                           0236788899999999999999999999999999999999766554   


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                                              +|+|||++......     .....+++.|+|||++.+..++.++|||||||++|+|
T Consensus       162 ------------------------kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  217 (280)
T cd05092         162 ------------------------KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEI  217 (280)
T ss_pred             ------------------------EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHH
Confidence                                    55555544322111     1122456789999999988999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC
Q 015532          279 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  357 (405)
Q Consensus       279 lt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (405)
                      ++ |.+||......+....+.....                                                 ......
T Consensus       218 ~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~  248 (280)
T cd05092         218 FTYGKQPWYQLSNTEAIECITQGRE-------------------------------------------------LERPRT  248 (280)
T ss_pred             HcCCCCCCccCCHHHHHHHHHcCcc-------------------------------------------------CCCCCC
Confidence            98 9999977665544332221100                                                 001123


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          358 SAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       358 ~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      +++.+.+||.+||+.||++||+++++++
T Consensus       249 ~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         249 CPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            4568899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.6e-33  Score=260.65  Aligned_cols=218  Identities=24%  Similarity=0.321  Sum_probs=166.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC---CcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+|.+.++||+|+||.||+|.+...   ...||||.....  ....+.+.+|+.+++.+.|+++....            
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            5689999999999999999987544   356999988643  33456788899999999999874321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||+|||++|++||||||+||+++.++.+                   
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~-------------------  146 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCV-------------------  146 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCe-------------------
Confidence                           1246888999999999999999999999999999999999876654                   


Q ss_pred             CCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  294 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~  294 (405)
                              +|+|||++.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+..
T Consensus       147 --------~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~  218 (270)
T cd05056         147 --------KLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI  218 (270)
T ss_pred             --------EEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence                    555555443322211    11234567999999988889999999999999999986 99999887665544


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.+..                       ..                          ......+..+.++|.+||..+|
T Consensus       219 ~~~~~~~-----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~P  249 (270)
T cd05056         219 GRIENGE-----------------------RL--------------------------PMPPNCPPTLYSLMTKCWAYDP  249 (270)
T ss_pred             HHHHcCC-----------------------cC--------------------------CCCCCCCHHHHHHHHHHcCCCh
Confidence            3332110                       00                          0112346689999999999999


Q ss_pred             CCCCCHHHHHc
Q 015532          375 AERLKAREALR  385 (405)
Q Consensus       375 ~~Rpta~elL~  385 (405)
                      ++|||+.++++
T Consensus       250 ~~Rpt~~~~~~  260 (270)
T cd05056         250 SKRPRFTELKA  260 (270)
T ss_pred             hhCcCHHHHHH
Confidence            99999999886

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.4e-33  Score=265.66  Aligned_cols=219  Identities=22%  Similarity=0.271  Sum_probs=164.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc----EEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|++.+.||+|+||.||+|.+..+++    .||+|++....  .....+.+|+.+++.+.|+++....           
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            568999999999999999999877775    57889886432  2234577899999999999874321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                   
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~-------------------  147 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-------------------  147 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCc-------------------
Confidence                            124677888999999999999999999999999999999976554                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                              +||+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       148 --------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~  219 (303)
T cd05110         148 --------VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE  219 (303)
T ss_pred             --------eEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                    4555555554332111     11235678999999998889999999999999999997 999997755433


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+... .                      ...                          .....+..+.+++.+||..
T Consensus       220 ~~~~~~~~-~----------------------~~~--------------------------~~~~~~~~~~~li~~c~~~  250 (303)
T cd05110         220 IPDLLEKG-E----------------------RLP--------------------------QPPICTIDVYMVMVKCWMI  250 (303)
T ss_pred             HHHHHHCC-C----------------------CCC--------------------------CCCCCCHHHHHHHHHHcCC
Confidence            32221110 0                      000                          0112345788999999999


Q ss_pred             CCCCCCCHHHHHcC
Q 015532          373 DPAERLKAREALRH  386 (405)
Q Consensus       373 dP~~Rpta~elL~h  386 (405)
                      ||++||++.++++.
T Consensus       251 ~p~~Rp~~~~l~~~  264 (303)
T cd05110         251 DADSRPKFKELAAE  264 (303)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.6e-33  Score=258.96  Aligned_cols=211  Identities=25%  Similarity=0.364  Sum_probs=159.1

Q ss_pred             eeecccceeEEEEEec--CCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCC---------------------
Q 015532           99 KMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT---------------------  153 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~---------------------  153 (405)
                      .||+|+||.||+|.+.  .++..||+|++....  ...+.+.+|+.+++++.|+++...                     
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            4899999999999765  445679999986532  334668899999999999887321                     


Q ss_pred             ------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCc
Q 015532          154 ------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  227 (405)
Q Consensus       154 ------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  227 (405)
                            ....+++..++.++.||+.||.|||++|++||||||+|||++.++.+                           
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~---------------------------  134 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYA---------------------------  134 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcE---------------------------
Confidence                  12357889999999999999999999999999999999999766544                           


Q ss_pred             eeccCCCCccccCCcc------ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          228 KLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       228 kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                      +|+|||++........      ...++..|+|||++.+..++.++|||||||++|++++ |..||......+....+.+.
T Consensus       135 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  214 (257)
T cd05115         135 KISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG  214 (257)
T ss_pred             EeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC
Confidence            5555555443221111      1123568999999988889999999999999999996 99999876655443332211


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                                             .+..                          .....++++.++|.+||..||++||++
T Consensus       215 -----------------------~~~~--------------------------~~~~~~~~l~~li~~c~~~~~~~Rp~~  245 (257)
T cd05115         215 -----------------------KRLD--------------------------CPAECPPEMYALMKDCWIYKWEDRPNF  245 (257)
T ss_pred             -----------------------CCCC--------------------------CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence                                   0000                          112346789999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      .++++
T Consensus       246 ~~i~~  250 (257)
T cd05115         246 AKVEE  250 (257)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.8e-33  Score=258.00  Aligned_cols=215  Identities=22%  Similarity=0.315  Sum_probs=165.1

Q ss_pred             EEEeeeecccceeEEEEEecCCC----cEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           95 RILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~~~~----~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++.+.||.|+||.||+|++...+    ..||+|+++....  ..+.+..|+.+++.+.|+++....              
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            56789999999999999998766    8999999975443  456788899999999888763211              


Q ss_pred             -------------cc-c-CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 -------------YR-S-FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 -------------~~-~-l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                   .. . +++..+..++.||+.||.|||++|++|+||||+||+++.++.++++|               
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~d---------------  146 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISD---------------  146 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcc---------------
Confidence                         01 1 78889999999999999999999999999999999998766555554               


Q ss_pred             CCCCCCCceeccCCCCccccCCcc----ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  294 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~  294 (405)
                                  ||.+........    ...++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+..
T Consensus       147 ------------fg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~  214 (258)
T smart00219      147 ------------FGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVL  214 (258)
T ss_pred             ------------cCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                        444433222111    1126788999999988889999999999999999998 89999876655544


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.....                       .                          ......+.++.+++.+||..||
T Consensus       215 ~~~~~~~~-----------------------~--------------------------~~~~~~~~~~~~~i~~~l~~~p  245 (258)
T smart00219      215 EYLKKGYR-----------------------L--------------------------PKPENCPPEIYKLMLQCWAEDP  245 (258)
T ss_pred             HHHhcCCC-----------------------C--------------------------CCCCcCCHHHHHHHHHHCcCCh
Confidence            43322100                       0                          0112246689999999999999


Q ss_pred             CCCCCHHHHHc
Q 015532          375 AERLKAREALR  385 (405)
Q Consensus       375 ~~Rpta~elL~  385 (405)
                      ++|||+.|+++
T Consensus       246 ~~Rpt~~~ll~  256 (258)
T smart00219      246 EDRPTFSELVE  256 (258)
T ss_pred             hhCcCHHHHHh
Confidence            99999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.1e-33  Score=264.61  Aligned_cols=220  Identities=18%  Similarity=0.298  Sum_probs=164.0

Q ss_pred             CCCeEEEeeeecccceeEEEEEec-------CCCcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~-------~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------  154 (405)
                      .++|.+.+.||+|+||.||+|++.       ..+..||+|.++..  ......+.+|+.+++.+ .|+++....      
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            467999999999999999999753       23457999998643  23345678899999999 788763211      


Q ss_pred             -------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          155 -------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       155 -------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                                                           ...+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~  173 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN  173 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence                                                 0135667788899999999999999999999999999999766


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                      +.                           ++|+|||.+......     .....++..|+|||++.+..++.++||||||
T Consensus       174 ~~---------------------------~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  226 (304)
T cd05101         174 NV---------------------------MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  226 (304)
T ss_pred             Cc---------------------------EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHH
Confidence            64                           455555555432211     1112356789999999988899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|+|++ |..||.+....+....+....                       .                          
T Consensus       227 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~--------------------------  257 (304)
T cd05101         227 VLMWEIFTLGGSPYPGIPVEELFKLLKEGH-----------------------R--------------------------  257 (304)
T ss_pred             HHHHHHHcCCCCCcccCCHHHHHHHHHcCC-----------------------c--------------------------
Confidence            99999998 889997766544443321100                       0                          


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .......+..+.+|+.+||..+|++|||+.|+++.
T Consensus       258 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         258 MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            00112346689999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.3e-33  Score=275.08  Aligned_cols=220  Identities=21%  Similarity=0.301  Sum_probs=162.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecchh--hhhHHHHHHHHHHHHHh-hcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~-~~~~~~~~--------  154 (405)
                      .++|++.++||+|+||.||+|.+...     +..||||+++...  ...+.+.+|+++|+++. |+++....        
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            35788999999999999999987533     3579999996432  33467889999999996 88873211        


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence                                                                                            


Q ss_pred             -----------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccc
Q 015532          155 -----------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  199 (405)
Q Consensus       155 -----------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~  199 (405)
                                                         ...+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~  275 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKI  275 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCE
Confidence                                               012566777889999999999999999999999999999987654


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHH
Q 015532          200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI  274 (405)
Q Consensus       200 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  274 (405)
                                                 ++|+|||++......     .....++..|+|||++.+..++.++|||||||+
T Consensus       276 ---------------------------~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvi  328 (400)
T cd05105         276 ---------------------------VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGIL  328 (400)
T ss_pred             ---------------------------EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHH
Confidence                                       455555555432211     112356778999999998889999999999999


Q ss_pred             HHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhh
Q 015532          275 LVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ  353 (405)
Q Consensus       275 l~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (405)
                      +|+|++ |..||........+......                      +...                          .
T Consensus       329 l~ellt~g~~P~~~~~~~~~~~~~~~~----------------------~~~~--------------------------~  360 (400)
T cd05105         329 LWEIFSLGGTPYPGMIVDSTFYNKIKS----------------------GYRM--------------------------A  360 (400)
T ss_pred             HHHHHHCCCCCCcccchhHHHHHHHhc----------------------CCCC--------------------------C
Confidence            999997 99999765432222111110                      0000                          0


Q ss_pred             cccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       354 ~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .....+..+.+++.+||+.||++|||+.++.+
T Consensus       361 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         361 KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            11234668899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.8e-33  Score=260.14  Aligned_cols=218  Identities=24%  Similarity=0.324  Sum_probs=165.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc---EEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.|++.+.||+|+||.||+|.+..+++   .||||+++..  ......+..|+.+++.+.|+++....            
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            358999999999999999999877654   6999998653  33456788999999999999873211            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.|++.||.|||++|++|+||||+||+++.++.+                  
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~------------------  145 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVC------------------  145 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcE------------------
Confidence                            1346788899999999999999999999999999999999766544                  


Q ss_pred             cCCCCCCCceeccCCCCccccCCcc------ce--ecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHS------YV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  289 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~------~~--~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~  289 (405)
                               +|+|||++........      ..  ..+..|+|||.+.+..++.++|||||||++|||++ |..||...+
T Consensus       146 ---------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~  216 (269)
T cd05065         146 ---------KVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS  216 (269)
T ss_pred             ---------EECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC
Confidence                     5555554433221110      01  12347999999998889999999999999999886 999998766


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+....+.... ..                                                ......+..+.+++.+|
T Consensus       217 ~~~~~~~i~~~~-~~------------------------------------------------~~~~~~~~~~~~li~~~  247 (269)
T cd05065         217 NQDVINAIEQDY-RL------------------------------------------------PPPMDCPTALHQLMLDC  247 (269)
T ss_pred             HHHHHHHHHcCC-cC------------------------------------------------CCcccCCHHHHHHHHHH
Confidence            554444332110 00                                                00123456788999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |..+|++||+++++++
T Consensus       248 l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         248 WQKDRNARPKFGQIVS  263 (269)
T ss_pred             cCCChhhCcCHHHHHH
Confidence            9999999999999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=3.4e-33  Score=264.47  Aligned_cols=218  Identities=21%  Similarity=0.320  Sum_probs=162.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-------CCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc-------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR-------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-------~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~-------  154 (405)
                      ++|.+.++||+|+||.||+|++..       ....||+|+++...  .....+..|+++++.+ .|+++....       
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            579999999999999999998642       34579999987432  2345577899999999 487762211       


Q ss_pred             ------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 ------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 ------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                                          ...+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~  171 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDN  171 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCC
Confidence                                                02367778889999999999999999999999999999997665


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHH
Q 015532          199 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  273 (405)
Q Consensus       199 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  273 (405)
                      .                           ++|+|||.++......     ....++..|+|||++.+..++.++|||||||
T Consensus       172 ~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~  224 (314)
T cd05099         172 V---------------------------MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGI  224 (314)
T ss_pred             c---------------------------EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHH
Confidence            4                           4555555554332111     1112345799999999888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhh
Q 015532          274 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  352 (405)
Q Consensus       274 il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (405)
                      ++|+|++ |..||.+....+....+....                       .                          .
T Consensus       225 ~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~--------------------------~  255 (314)
T cd05099         225 LMWEIFTLGGSPYPGIPVEELFKLLREGH-----------------------R--------------------------M  255 (314)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----------------------C--------------------------C
Confidence            9999999 899998766544443322100                       0                          0


Q ss_pred             hcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       353 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      ......+.++.+|+.+||..||++|||+.++++
T Consensus       256 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         256 DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            111234568899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.4e-33  Score=267.83  Aligned_cols=220  Identities=20%  Similarity=0.308  Sum_probs=163.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC-------CcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~-------~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------  154 (405)
                      ..+|++.+.||+|+||.||+|++...       +..||+|+++..  ....+.+.+|+++++++ .|+++....      
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   90 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence            35799999999999999999986432       236999988643  23345678899999999 688773211      


Q ss_pred             -------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          155 -------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       155 -------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                                                           ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~  170 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED  170 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC
Confidence                                                 0125567788899999999999999999999999999999776


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                      +.+                           +|+|||+++......     ....++..|+|||++.+..++.++||||||
T Consensus       171 ~~~---------------------------kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  223 (334)
T cd05100         171 NVM---------------------------KIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  223 (334)
T ss_pred             CcE---------------------------EECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHH
Confidence            644                           555555544322111     112345679999999998899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|+|++ |..||.+.+..+....+....                       .                          
T Consensus       224 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~--------------------------  254 (334)
T cd05100         224 VLLWEIFTLGGSPYPGIPVEELFKLLKEGH-----------------------R--------------------------  254 (334)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----------------------C--------------------------
Confidence            99999998 899998766554443322100                       0                          


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .......+..+.+|+.+||+.+|++|||+.|++++
T Consensus       255 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         255 MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            00112345688999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.6e-33  Score=261.80  Aligned_cols=218  Identities=19%  Similarity=0.257  Sum_probs=163.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++|++.+.||+|+||.||+|.+..     ++..||+|++....  .....+.+|+.+++.+.|+++....          
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            579999999999999999998753     57889999986432  3345678899999999998873211          


Q ss_pred             ---------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe
Q 015532          155 ---------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  195 (405)
Q Consensus       155 ---------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~  195 (405)
                                                             ...+++..++.++.||+.||.|||++|++||||||+||+++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~  164 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVG  164 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEec
Confidence                                                   01256777889999999999999999999999999999997


Q ss_pred             cccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHH
Q 015532          196 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWS  270 (405)
Q Consensus       196 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  270 (405)
                      .++.+                           +|+|||.+......     .....++..|+|||.+.+..++.++||||
T Consensus       165 ~~~~~---------------------------~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s  217 (288)
T cd05050         165 ENMVV---------------------------KIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWA  217 (288)
T ss_pred             CCCce---------------------------EECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHH
Confidence            76655                           45555544322111     11123456799999999889999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchh
Q 015532          271 VGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  349 (405)
Q Consensus       271 lG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (405)
                      |||++|+|++ |..||.+....+....+...  .                     ..                       
T Consensus       218 lG~il~el~~~~~~p~~~~~~~~~~~~~~~~--~---------------------~~-----------------------  251 (288)
T cd05050         218 YGVVLWEIFSYGMQPYYGMAHEEVIYYVRDG--N---------------------VL-----------------------  251 (288)
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC--C---------------------CC-----------------------
Confidence            9999999997 88899776554443322110  0                     00                       


Q ss_pred             hhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       350 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                         ......+.++.+||.+||+.||++|||+.|+++
T Consensus       252 ---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         252 ---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             ---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence               011234568899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.5e-33  Score=259.08  Aligned_cols=218  Identities=22%  Similarity=0.289  Sum_probs=165.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC---cEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~---~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||.||+|++..++   ..||+|.++..  ....+.+..|+.+++.+.|+++....            
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            57999999999999999999986444   37999998643  23456788899999999999874311            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++.++..++.|++.||.|||++|++||||||+|||++.++.+                  
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~------------------  145 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVC------------------  145 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeE------------------
Confidence                            1246788899999999999999999999999999999999766554                  


Q ss_pred             cCCCCCCCceeccCCCCccccCCcc------ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  291 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~  291 (405)
                               +|+|||.+........      ...++..|+|||.+.+..++.++|+|||||++|++++ |..||......
T Consensus       146 ---------~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~  216 (267)
T cd05066         146 ---------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ  216 (267)
T ss_pred             ---------EeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH
Confidence                     5555555443222111      1123467999999998889999999999999999886 99999876655


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+.+... .                                                ......++.+.+++.+||+
T Consensus       217 ~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~li~~~l~  247 (267)
T cd05066         217 DVIKAIEEGYR-L------------------------------------------------PAPMDCPAALHQLMLDCWQ  247 (267)
T ss_pred             HHHHHHhCCCc-C------------------------------------------------CCCCCCCHHHHHHHHHHcc
Confidence            44433322100 0                                                0012345688999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .+|++|||+.++++
T Consensus       248 ~~p~~Rp~~~~i~~  261 (267)
T cd05066         248 KDRNERPKFEQIVS  261 (267)
T ss_pred             cCchhCCCHHHHHH
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.1e-33  Score=260.17  Aligned_cols=217  Identities=17%  Similarity=0.244  Sum_probs=162.1

Q ss_pred             eEEEeeeecccceeEEEEEec---CCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           94 YRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      |.+.+.||+|+||.||+|.+.   .+++.||||++...   ....+.+.+|+++++.+.|+++....             
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            667889999999999999864   35789999998642   23345678899999999998862110             


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  208 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~  208 (405)
                                                ...+++..++.++.||+.||+|||++||+||||||+||+++.++.         
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~---------  151 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMT---------  151 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCC---------
Confidence                                      013566788999999999999999999999999999999976654         


Q ss_pred             ccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CC
Q 015532          209 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  282 (405)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~  282 (405)
                                        ++|+|||++.......     ....++..|++||.+.+..++.++|||||||++|+|++ |.
T Consensus       152 ------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~  213 (273)
T cd05074         152 ------------------VCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQ  213 (273)
T ss_pred             ------------------EEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCC
Confidence                              4555555554322111     11235678999999998889999999999999999999 89


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      +||.+.+..+....+...                       ....                          .....+..+
T Consensus       214 ~p~~~~~~~~~~~~~~~~-----------------------~~~~--------------------------~~~~~~~~~  244 (273)
T cd05074         214 TPYAGVENSEIYNYLIKG-----------------------NRLK--------------------------QPPDCLEDV  244 (273)
T ss_pred             CCCCCCCHHHHHHHHHcC-----------------------CcCC--------------------------CCCCCCHHH
Confidence            999876554333222110                       0000                          012345688


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+++.+||..+|++|||+.+++++
T Consensus       245 ~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         245 YELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.5e-33  Score=263.00  Aligned_cols=233  Identities=21%  Similarity=0.345  Sum_probs=162.8

Q ss_pred             CeEEEeeeecccceeEEEEEe----cCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~----~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .|++++.||+|+||.||+|+.    ..+++.||+|.++..  ....+.+.+|+++++.+.|+++....            
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            478999999999999999984    456889999998643  23345688899999999998863210            


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++               
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~---------------  149 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK---------------  149 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEE---------------
Confidence                              12367888999999999999999999999999999999998766554               


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                  |+|||++.......      ....++..|+|||++.+..++.++|||||||++|+|+++..|+.....
T Consensus       150 ------------l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~  217 (284)
T cd05079         150 ------------IGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT  217 (284)
T ss_pred             ------------ECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc
Confidence                        45555443322111      123467789999999888899999999999999999998776533111


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                        .   .....++........   ........+.                          .......++..+.+|+.+||
T Consensus       218 --~---~~~~~~~~~~~~~~~---~~~~~~~~~~--------------------------~~~~~~~~~~~~~~li~~~l  263 (284)
T cd05079         218 --L---FLKMIGPTHGQMTVT---RLVRVLEEGK--------------------------RLPRPPNCPEEVYQLMRKCW  263 (284)
T ss_pred             --h---hhhhcccccccccHH---HHHHHHHcCc--------------------------cCCCCCCCCHHHHHHHHHHc
Confidence              0   111111111100000   0000000000                          00112345778999999999


Q ss_pred             ccCCCCCCCHHHHHcC
Q 015532          371 RYDPAERLKAREALRH  386 (405)
Q Consensus       371 ~~dP~~Rpta~elL~h  386 (405)
                      +.||++|||+++++++
T Consensus       264 ~~~p~~Rpt~~~il~~  279 (284)
T cd05079         264 EFQPSKRTTFQNLIEG  279 (284)
T ss_pred             cCCcccCcCHHHHHHH
Confidence            9999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-35  Score=256.26  Aligned_cols=232  Identities=24%  Similarity=0.407  Sum_probs=174.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhh-cCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLAR-HDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~-~~~~~~~--------------  154 (405)
                      +..+-+..||.|+||+|++-.++.+|+..|||.++...  +.+.+++.|.+...+-+. ++|+...              
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            34566788999999999999999999999999997644  455667778776555433 3332111              


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                       ...++|..+-.+....+.||+||-. ..|||||+||+|||++..|                  
T Consensus       144 LMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G------------------  205 (361)
T KOG1006|consen  144 LMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG------------------  205 (361)
T ss_pred             HHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC------------------
Confidence                             2356777777788888999999995 6899999999999998766                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                               .+||||||++.......  +.-.|...|||||.+...  +|+.++|+||||++|||++||..|+.+.+.  
T Consensus       206 ---------~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--  274 (361)
T KOG1006|consen  206 ---------DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--  274 (361)
T ss_pred             ---------CEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--
Confidence                     56777777765443322  224788999999999743  599999999999999999999999987554  


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ++.++.++...-|+.+..                  +                       ..--+++..++.||.-||.+
T Consensus       275 vfeql~~Vv~gdpp~l~~------------------~-----------------------~~~~~~s~~~~~fintCl~K  313 (361)
T KOG1006|consen  275 VFEQLCQVVIGDPPILLF------------------D-----------------------KECVHYSFSMVRFINTCLIK  313 (361)
T ss_pred             HHHHHHHHHcCCCCeecC------------------c-----------------------ccccccCHHHHHHHHHHhhc
Confidence            566666654332221100                  0                       00023577899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~  393 (405)
                      |-.+||...+++++||++...
T Consensus       314 d~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  314 DRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             ccccCcchhhhhcCchhhhhh
Confidence            999999999999999998754

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=4.6e-33  Score=255.57  Aligned_cols=219  Identities=20%  Similarity=0.291  Sum_probs=162.8

Q ss_pred             eeeecccceeEEEEEecC-CC--cEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~-~~--~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|.+.. .+  ..||||.++....  ..+.+..|+.+++++.|+++....                  
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            468999999999999865 33  3699999975433  456788899999999998874321                  


Q ss_pred             ---------c-ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ---------Y-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ---------~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                               . ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+|++|||++.......         
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~---------  151 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE---------  151 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccc---------
Confidence                     1 246788999999999999999999999999999999999877766555555432221100         


Q ss_pred             CCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 015532          225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGP  303 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~  303 (405)
                              +.    ........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+......
T Consensus       152 --------~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~  219 (257)
T cd05040         152 --------DH----YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGER  219 (257)
T ss_pred             --------cc----eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCc
Confidence                    00    000112346778999999998889999999999999999998 99999876665544433221000


Q ss_pred             CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHH
Q 015532          304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA  383 (405)
Q Consensus       304 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el  383 (405)
                                                                      .......+..+.+++.+||+.+|++|||+.++
T Consensus       220 ------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~  251 (257)
T cd05040         220 ------------------------------------------------LERPEACPQDIYNVMLQCWAHNPADRPTFAAL  251 (257)
T ss_pred             ------------------------------------------------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence                                                            00112345688999999999999999999999


Q ss_pred             Hc
Q 015532          384 LR  385 (405)
Q Consensus       384 L~  385 (405)
                      ++
T Consensus       252 ~~  253 (257)
T cd05040         252 RE  253 (257)
T ss_pred             HH
Confidence            86

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-33  Score=259.38  Aligned_cols=218  Identities=22%  Similarity=0.285  Sum_probs=165.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc----EEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+|++.+.||+|+||.||+|.++.+++    .||+|.++...  .....+.+|+.+++.+.|+++....           
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            579999999999999999999876654    58999886543  3346678899999999999874221           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                  
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~------------------  148 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHV------------------  148 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeE------------------
Confidence                            1247788999999999999999999999999999999999766644                  


Q ss_pred             cCCCCCCCceeccCCCCccccCCccc-----eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                               +|+|||.+.........     ..++..|+|||.+.+..++.++|+|||||++|++++ |..||.+....+
T Consensus       149 ---------kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  219 (279)
T cd05057         149 ---------KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE  219 (279)
T ss_pred             ---------EECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence                     55555555433221111     123567999999988889999999999999999998 999998766544


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+... ...                                                ......+..+.+++.+||..
T Consensus       220 ~~~~~~~~-~~~------------------------------------------------~~~~~~~~~~~~~~~~~l~~  250 (279)
T cd05057         220 IPDLLEKG-ERL------------------------------------------------PQPPICTIDVYMVLVKCWMI  250 (279)
T ss_pred             HHHHHhCC-CCC------------------------------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            33322210 000                                                00112345788999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      ||++|||+.++++
T Consensus       251 ~p~~Rp~~~~l~~  263 (279)
T cd05057         251 DAESRPTFKELIN  263 (279)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1e-34  Score=277.37  Aligned_cols=254  Identities=26%  Similarity=0.391  Sum_probs=181.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhh----hHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      -|..++.||-|+||.|.+++...|...||+|.+++.+-.    ......|-.||.....+-++...              
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            488899999999999999999999999999999765432    22344577788776554432211              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC--CCCCccc
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS--KDGSYFK  219 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~--~~~~~~~  219 (405)
                                   .+.|+|+.++.++.++..|+++.|.+|+|||||||+||||+.+|++||+||||+.-+.  .+.+.+.
T Consensus       710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq  789 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  789 (1034)
T ss_pred             ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccccc
Confidence                         3568999999999999999999999999999999999999999999999999985332  1121111


Q ss_pred             CC---------------CCCCCceeccCCCCccccC-CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCC
Q 015532          220 NL---------------PKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       220 ~~---------------~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                      +-               +....+|+..+-..+.... ..-.++||+.|+|||++...+|+.-+|+||.|||||||+.|++
T Consensus       790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~  869 (1034)
T KOG0608|consen  790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQP  869 (1034)
T ss_pred             CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCC
Confidence            10               0011112111110000000 0123689999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      ||......+....+..                            |..                  .+......++++++.
T Consensus       870 pf~~~tp~~tq~kv~n----------------------------w~~------------------~l~~~~~~~ls~e~~  903 (1034)
T KOG0608|consen  870 PFLADTPGETQYKVIN----------------------------WRN------------------FLHIPYQGNLSKEAL  903 (1034)
T ss_pred             CccCCCCCcceeeeee----------------------------hhh------------------ccccccccccCHHHH
Confidence            9987665443322211                            100                  011122346688999


Q ss_pred             HHHHHccccCCCCCC---CHHHHHcCCCCCCCC
Q 015532          364 DLLQGLLRYDPAERL---KAREALRHPFFTRDV  393 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rp---ta~elL~hp~f~~~~  393 (405)
                      +||.+ |..++++|.   .++|+.+||||+.-.
T Consensus       904 ~li~k-Lc~sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  904 DLIQK-LCCSADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             HHHHH-HhcChhhhhcccchhhhhcCccccccc
Confidence            99988 456899998   488899999999754

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3.1e-33  Score=257.89  Aligned_cols=217  Identities=23%  Similarity=0.293  Sum_probs=159.1

Q ss_pred             eeeecccceeEEEEEecC------------CCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           98 SKMGEGTFGQVVECFDNE------------KKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~------------~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      +.||+|+||.||+|+...            ....||+|++.... .....+..|+.++..+.|+++....          
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            469999999999998532            22358999876433 2334667789999999999874321          


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+|||++.++..+               
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~---------------  145 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG---------------  145 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccC---------------
Confidence                              13478889999999999999999999999999999999997654211               


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHh-CCCCCCchhHHHHHHHHHHHH-hCCCCCCCCChHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELC-SGEALFQTHENLEHL  294 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~~ll-tg~~pf~~~~~~~~~  294 (405)
                           .....++++|||.+...... ....++..|+|||.+. +..++.++|||||||++|+|+ +|..||......+..
T Consensus       146 -----~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~  219 (262)
T cd05077         146 -----ECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE  219 (262)
T ss_pred             -----CCCceeEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH
Confidence                 11234789999987654322 2346788999999987 456889999999999999998 588888764432211


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      .....                       .                            .......+.++.+||.+||+.||
T Consensus       220 ~~~~~-----------------------~----------------------------~~~~~~~~~~~~~li~~cl~~dp  248 (262)
T cd05077         220 RFYEG-----------------------Q----------------------------CMLVTPSCKELADLMTHCMNYDP  248 (262)
T ss_pred             HHHhc-----------------------C----------------------------ccCCCCChHHHHHHHHHHcCCCh
Confidence            10000                       0                            00011224578899999999999


Q ss_pred             CCCCCHHHHHcC
Q 015532          375 AERLKAREALRH  386 (405)
Q Consensus       375 ~~Rpta~elL~h  386 (405)
                      ++||++.+|+++
T Consensus       249 ~~Rp~~~~il~~  260 (262)
T cd05077         249 NQRPFFRAIMRD  260 (262)
T ss_pred             hhCcCHHHHHHh
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=9.5e-34  Score=257.35  Aligned_cols=202  Identities=25%  Similarity=0.360  Sum_probs=150.4

Q ss_pred             ccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc---------------------------c
Q 015532          103 GTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------------------Y  155 (405)
Q Consensus       103 G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------------------~  155 (405)
                      |.||.||+|++..+++.||+|+++....    ...|...+....|+++....                           .
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   79 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF   79 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence            8899999999999999999999976432    22344444444566652211                           1


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCC
Q 015532          156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  235 (405)
Q Consensus       156 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  235 (405)
                      ..+++..+..++.|++.||+|||++||+||||||+||+++.++.                           ++++|||.+
T Consensus        80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~---------------------------~~l~df~~~  132 (237)
T cd05576          80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGH---------------------------IQLTYFSRW  132 (237)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC---------------------------EEEecccch
Confidence            24788899999999999999999999999999999999977654                           555666654


Q ss_pred             ccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHh
Q 015532          236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR  315 (405)
Q Consensus       236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~  315 (405)
                      ...........++..|+|||.+.+..++.++|+||+||++|+|++|..||........     .                
T Consensus       133 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~-----~----------------  191 (237)
T cd05576         133 SEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN-----T----------------  191 (237)
T ss_pred             hccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc-----c----------------
Confidence            4333332334567789999999888899999999999999999999988753211000     0                


Q ss_pred             hHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH-----HHHHcCCCC
Q 015532          316 AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA-----REALRHPFF  389 (405)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta-----~elL~hp~f  389 (405)
                             ...                          ...+...++.+.+||.+||+.||++|+|+     +++++||||
T Consensus       192 -------~~~--------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         192 -------HTT--------------------------LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             -------ccc--------------------------cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence                   000                          01112346688999999999999999986     999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=4e-33  Score=258.64  Aligned_cols=220  Identities=19%  Similarity=0.291  Sum_probs=166.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .+|++.+.||+|+||.||+|+.+.     +.+.||+|.+.....  ..+.+.+|+++++++.|+++....          
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            569999999999999999999753     346799998864332  356788999999999998763211          


Q ss_pred             -----------------cc---------cCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccc
Q 015532          155 -----------------YR---------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  208 (405)
Q Consensus       155 -----------------~~---------~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~  208 (405)
                                       ..         .+++..+..++.||+.||.|||++||+||||||+||+++.++.++++|||  
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~--  162 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS--  162 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc--
Confidence                             11         47889999999999999999999999999999999999877655555554  


Q ss_pred             ccCCCCCCcccCCCCCCCceeccCCCCccccC----CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCC
Q 015532          209 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA  283 (405)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~  283 (405)
                                               ++.....    ......++..|+|||.+.+..++.++|||||||++|+|++ |..
T Consensus       163 -------------------------~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~  217 (275)
T cd05046         163 -------------------------LSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGEL  217 (275)
T ss_pred             -------------------------cccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                                     4332111    1112345677999999988888999999999999999998 889


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      ||........+..+...                        ...|                        ......+..+.
T Consensus       218 p~~~~~~~~~~~~~~~~------------------------~~~~------------------------~~~~~~~~~l~  249 (275)
T cd05046         218 PFYGLSDEEVLNRLQAG------------------------KLEL------------------------PVPEGCPSRLY  249 (275)
T ss_pred             CccccchHHHHHHHHcC------------------------CcCC------------------------CCCCCCCHHHH
Confidence            99765544433322110                        0011                        11123466899


Q ss_pred             HHHHHccccCCCCCCCHHHHHcC
Q 015532          364 DLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      +++.+||+.||++|||+.|+++.
T Consensus       250 ~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         250 KLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHH
Confidence            99999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-33  Score=255.06  Aligned_cols=211  Identities=21%  Similarity=0.308  Sum_probs=159.4

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      ++||+|+||.||+|.+.. ++.||+|+++...  ...+.+..|+++++.+.|+++....                     
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            479999999999999977 8999999986532  2456788899999999998863210                     


Q ss_pred             -------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCc
Q 015532          155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  227 (405)
Q Consensus       155 -------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  227 (405)
                             ...+++..+..++.|++.||.|||++|++||||||+||+++.++.+                           
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~---------------------------  132 (251)
T cd05041          80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVL---------------------------  132 (251)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcE---------------------------
Confidence                   1246778889999999999999999999999999999999876655                           


Q ss_pred             eeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 015532          228 KLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       228 kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~  301 (405)
                      +|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+....
T Consensus       133 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~  212 (251)
T cd05041         133 KISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY  212 (251)
T ss_pred             EEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC
Confidence            555555443322111     01123557999999988889999999999999999999 899997765543332221100


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                      .                       .                          ......+..+.+++.+||+.+|++|||++
T Consensus       213 ~-----------------------~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  243 (251)
T cd05041         213 R-----------------------M--------------------------PAPQLCPEEIYRLMLQCWAYDPENRPSFS  243 (251)
T ss_pred             C-----------------------C--------------------------CCCccCCHHHHHHHHHHhccChhhCcCHH
Confidence            0                       0                          01123456899999999999999999999


Q ss_pred             HHHc
Q 015532          382 EALR  385 (405)
Q Consensus       382 elL~  385 (405)
                      |+++
T Consensus       244 ell~  247 (251)
T cd05041         244 EIYN  247 (251)
T ss_pred             HHHH
Confidence            9986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.1e-33  Score=258.54  Aligned_cols=215  Identities=27%  Similarity=0.416  Sum_probs=162.2

Q ss_pred             EEEeeeecccceeEEEEEec----CCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           95 RILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~----~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++.+.||.|.||.||+|...    ..+..|+||+++..  ....+.+.+|++++++++|+++....              
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            46789999999999999987    34678999999542  23367889999999999999873211              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||+++|+|+||+++||+++.++.+|++||              
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f--------------  147 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDF--------------  147 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEEST--------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------------
Confidence                           135788999999999999999999999999999999999987765555554              


Q ss_pred             CCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH  293 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~  293 (405)
                                   |++......     .....+...|+|||.+.+..++.++||||||+++|||++ |+.||...+..+.
T Consensus       148 -------------~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~  214 (259)
T PF07714_consen  148 -------------GLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI  214 (259)
T ss_dssp             -------------TTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred             -------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                         444333111     111346678999999998889999999999999999999 7899988776665


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.+..                       +                          ......++..+.++|.+||..|
T Consensus       215 ~~~~~~~~-----------------------~--------------------------~~~~~~~~~~~~~li~~C~~~~  245 (259)
T PF07714_consen  215 IEKLKQGQ-----------------------R--------------------------LPIPDNCPKDIYSLIQQCWSHD  245 (259)
T ss_dssp             HHHHHTTE-----------------------E--------------------------TTSBTTSBHHHHHHHHHHT-SS
T ss_pred             cccccccc-----------------------c--------------------------ceeccchhHHHHHHHHHHcCCC
Confidence            55442210                       0                          0112345678999999999999


Q ss_pred             CCCCCCHHHHHc
Q 015532          374 PAERLKAREALR  385 (405)
Q Consensus       374 P~~Rpta~elL~  385 (405)
                      |++|||+.++++
T Consensus       246 p~~RPs~~~i~~  257 (259)
T PF07714_consen  246 PEKRPSFQEILQ  257 (259)
T ss_dssp             GGGS--HHHHHH
T ss_pred             hhhCcCHHHHHh
Confidence            999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-34  Score=280.18  Aligned_cols=229  Identities=26%  Similarity=0.441  Sum_probs=189.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCC------------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG------------------  152 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~------------------  152 (405)
                      ++.|++.+.||.|.+|.||+++.+.+++.+|+|++.-.....++...|.+||+.+.+|....                  
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW   97 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW   97 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence            46799999999999999999999999999999999877777788888999999998876522                  


Q ss_pred             -----------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          153 -----------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       153 -----------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                       .+...+.|..+..|++.++.||.+||.+.++|||||-.|||++.+|                 
T Consensus        98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~-----------------  160 (953)
T KOG0587|consen   98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA-----------------  160 (953)
T ss_pred             EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC-----------------
Confidence                             1245678999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCC-----CCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                .|||+|||.+.....   ...+.+||+.|||||++...     .|+..+|+||||++..||.-|.+|+..
T Consensus       161 ----------~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~D  230 (953)
T KOG0587|consen  161 ----------EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCD  230 (953)
T ss_pred             ----------cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccC
Confidence                      567777777654332   34557999999999999753     478899999999999999999999977


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      ......+..                                               ..+.|.+....++..+.++.+||.
T Consensus       231 mHPmraLF~-----------------------------------------------IpRNPPPkLkrp~kWs~~FndFIs  263 (953)
T KOG0587|consen  231 MHPMRALFL-----------------------------------------------IPRNPPPKLKRPKKWSKKFNDFIS  263 (953)
T ss_pred             cchhhhhcc-----------------------------------------------CCCCCCccccchhhHHHHHHHHHH
Confidence            655433322                                               223333344445667889999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .||..|-++||+..++|+|||++...
T Consensus       264 ~cL~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  264 TCLVKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             HHHhhccccCcchhhhccCCcccccc
Confidence            99999999999999999999999554

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=6.2e-33  Score=258.66  Aligned_cols=234  Identities=21%  Similarity=0.283  Sum_probs=161.6

Q ss_pred             CCeEEEeeeecccceeEEEEEe----cCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~----~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+|++.+.||+|+||.||+|..    ..+++.||||.+.... ...+.+.+|+++++.+.|+++....            
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4699999999999999999974    4578899999986543 2345678899999999998863210            


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++++|||          
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg----------  153 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFG----------  153 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCc----------
Confidence                              1236778889999999999999999999999999999999876655555554          


Q ss_pred             cccCCCCCCCceeccCCCCccccCCcc------ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                       ++........      ...++..|+|||++.+..++.++|||||||++|||++|..++.....
T Consensus       154 -----------------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~  216 (284)
T cd05081         154 -----------------LTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA  216 (284)
T ss_pred             -----------------ccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch
Confidence                             4433221111      01234469999999988899999999999999999998877643221


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                       .....    .+.....                       .. ....+.......    .........+.++.+|+.+||
T Consensus       217 -~~~~~----~~~~~~~-----------------------~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~cl  263 (284)
T cd05081         217 -EFMRM----MGNDKQG-----------------------QM-IVYHLIELLKNN----GRLPAPPGCPAEIYAIMKECW  263 (284)
T ss_pred             -hhhhh----ccccccc-----------------------cc-chHHHHHHHhcC----CcCCCCCCCCHHHHHHHHHHc
Confidence             11111    1110000                       00 000000000000    000112345678999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 015532          371 RYDPAERLKAREALR  385 (405)
Q Consensus       371 ~~dP~~Rpta~elL~  385 (405)
                      ..+|++|||+.|+++
T Consensus       264 ~~~p~~Rpt~~ei~~  278 (284)
T cd05081         264 NNDPSQRPSFSELAL  278 (284)
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=5.7e-33  Score=256.70  Aligned_cols=217  Identities=20%  Similarity=0.316  Sum_probs=162.4

Q ss_pred             eeeecccceeEEEEEecCCC------cEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           98 SKMGEGTFGQVVECFDNEKK------ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~------~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.||+|+||.||+|++....      +.||||.+....  .....+.+|+++++.+.|+++....               
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36999999999999986543      789999886432  3456678899999999999873211               


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.||+.||.|||+++++|+||||+||+++.++.                
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~----------------  144 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGY----------------  144 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCC----------------
Confidence                               012566788889999999999999999999999999999986540                


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  289 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~  289 (405)
                            +....++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus       145 ------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~  218 (269)
T cd05044         145 ------DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN  218 (269)
T ss_pred             ------CCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC
Confidence                  112346777777665332211     11245678999999998889999999999999999998 999998766


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+....+....                       .                          .......+..+.+||.+|
T Consensus       219 ~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~~~~~li~~~  249 (269)
T cd05044         219 NQEVLQHVTAGG-----------------------R--------------------------LQKPENCPDKIYQLMTNC  249 (269)
T ss_pred             HHHHHHHHhcCC-----------------------c--------------------------cCCcccchHHHHHHHHHH
Confidence            655443321100                       0                          001123466889999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |+.+|++||+++++++
T Consensus       250 l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         250 WAQDPSERPTFDRIQE  265 (269)
T ss_pred             cCCCcccCCCHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=6.7e-33  Score=255.22  Aligned_cols=212  Identities=20%  Similarity=0.270  Sum_probs=154.2

Q ss_pred             eeeecccceeEEEEEecC---CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNE---KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~---~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|.+..   .+..||||.+...  ....+.+..|+.+++.+.|+++....                  
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998653   3467999988542  23345677899999999999873211                  


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+|++                    
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~--------------------  140 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVA--------------------  140 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEEC--------------------
Confidence                       1123566778889999999999999999999999999999876655444                    


Q ss_pred             CCCceeccCCCCccccCC-------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  295 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~  295 (405)
                             |||++......       .....++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+...
T Consensus       141 -------dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~  213 (262)
T cd05058         141 -------DFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITV  213 (262)
T ss_pred             -------CccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence                   55444322111       112245678999999988889999999999999999999 567776655433322


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+..                       +....                          .....++.+.+++.+||..+|+
T Consensus       214 ~~~~-----------------------~~~~~--------------------------~~~~~~~~~~~li~~cl~~~p~  244 (262)
T cd05058         214 YLLQ-----------------------GRRLL--------------------------QPEYCPDPLYEVMLSCWHPKPE  244 (262)
T ss_pred             HHhc-----------------------CCCCC--------------------------CCCcCCHHHHHHHHHHcCCChh
Confidence            2111                       00000                          0122356789999999999999


Q ss_pred             CCCCHHHHHc
Q 015532          376 ERLKAREALR  385 (405)
Q Consensus       376 ~Rpta~elL~  385 (405)
                      +||++.++++
T Consensus       245 ~Rp~~~~il~  254 (262)
T cd05058         245 MRPTFSELVS  254 (262)
T ss_pred             hCCCHHHHHH
Confidence            9999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.1e-32  Score=252.00  Aligned_cols=211  Identities=22%  Similarity=0.312  Sum_probs=159.0

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------------  154 (405)
                      +.||+|+||.||+|... ++..||+|+++..  ......+.+|+++++.+.|+++....                     
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence            46999999999999864 6778999998643  23345678899999999999873211                     


Q ss_pred             -------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCc
Q 015532          155 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  227 (405)
Q Consensus       155 -------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  227 (405)
                             ...+++..+..++.|++.||.|||++|++||||||+||+++.++.+                           
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~---------------------------  132 (250)
T cd05085          80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVL---------------------------  132 (250)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeE---------------------------
Confidence                   1246788999999999999999999999999999999999876654                           


Q ss_pred             eeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 015532          228 KLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       228 kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g  302 (405)
                      +|+|||++.......    ....++..|+|||++.+..++.++|||||||++|++++ |..||.+.........+.... 
T Consensus       133 ~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~-  211 (250)
T cd05085         133 KISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY-  211 (250)
T ss_pred             EECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-
Confidence            555555443222111    11234567999999988889999999999999999998 999998765544333221100 


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                                            .                          .......+..+.+|+.+||..+|++|||+.+
T Consensus       212 ----------------------~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  243 (250)
T cd05085         212 ----------------------R--------------------------MSCPQKCPDDVYKVMQRCWDYKPENRPKFSE  243 (250)
T ss_pred             ----------------------C--------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence                                  0                          0011234668999999999999999999999


Q ss_pred             HHc
Q 015532          383 ALR  385 (405)
Q Consensus       383 lL~  385 (405)
                      +++
T Consensus       244 l~~  246 (250)
T cd05085         244 LQK  246 (250)
T ss_pred             HHH
Confidence            986

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=2.1e-34  Score=264.88  Aligned_cols=295  Identities=27%  Similarity=0.411  Sum_probs=193.5

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecC---CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCC------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT------------  153 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~------------  153 (405)
                      .+.+.|.++++||+|+|++||++.+..   .++.||+|.+..... ......|+++|..+...+.+..            
T Consensus        33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~  111 (418)
T KOG1167|consen   33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA  111 (418)
T ss_pred             hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence            345679999999999999999999877   788999999865433 4558889999999877654221            


Q ss_pred             -------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc-cccccCCccccccCCCCC---C
Q 015532          154 -------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKFLSRSSKDG---S  216 (405)
Q Consensus       154 -------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~-~~~k~~df~~~~~~~~~~---~  216 (405)
                                   .+..++..+++.+++.++.||.++|.+|||||||||.|+|.+.. +.-.|.|||++.......   .
T Consensus       112 ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~  191 (418)
T KOG1167|consen  112 IVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEH  191 (418)
T ss_pred             EEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhh
Confidence                         14567888999999999999999999999999999999999854 666799999987311100   0


Q ss_pred             cc-----cCCC-------CCCCceecc-CCCCc--cc--cCCccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHH
Q 015532          217 YF-----KNLP-------KSSAIKLID-FGSTT--FE--HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVEL  278 (405)
Q Consensus       217 ~~-----~~~~-------~~~~~kl~D-fg~a~--~~--~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~l  278 (405)
                      ..     ....       ....+.... -|..+  ..  ........||++|+|||++...+ .+.++||||.|+|++.+
T Consensus       192 s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lsl  271 (418)
T KOG1167|consen  192 SRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSL  271 (418)
T ss_pred             hhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehh
Confidence            00     0000       000000000 00000  00  01112258999999999998764 78999999999999999


Q ss_pred             HhCCCCCC-CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCC-CCCCchhhHHHHHHhc--------cch
Q 015532          279 CSGEALFQ-THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLL--------RLP  348 (405)
Q Consensus       279 ltg~~pf~-~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~  348 (405)
                      +++..||- ..++.+.+..+..+.|...-.-.....         |...-|. +...........+...        +.+
T Consensus       272 ls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~---------g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~  342 (418)
T KOG1167|consen  272 LSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALP---------GRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP  342 (418)
T ss_pred             hccccccccCccccchHHHHHHHhChHHHHHHhhcC---------CceeeeccccccccHHHHhchhccChhhccccccc
Confidence            99999974 455667778888777753321111110         0000111 1100111111111111        001


Q ss_pred             hhhhh-cccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          349 NLIMQ-HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       349 ~~~~~-~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +.... ..+..+..+.||+.+||+.||.+|.||+++|+||||....
T Consensus       343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence            11122 2233455889999999999999999999999999999654

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=9.2e-33  Score=255.73  Aligned_cols=212  Identities=21%  Similarity=0.269  Sum_probs=156.4

Q ss_pred             eeeecccceeEEEEEecCCCc--EEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------------------  154 (405)
                      +.||+|+||.||+|++..++.  .+|+|.++..  ....+.+..|++++.++ .|+++....                  
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999987765  4688888642  23445678899999999 677663210                  


Q ss_pred             -------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          155 -------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 -------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                               ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+         
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~---------  151 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA---------  151 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeE---------
Confidence                                     0136788899999999999999999999999999999999876654         


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  286 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~  286 (405)
                                        +|+|||++.......  .....+..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       152 ------------------kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~  213 (270)
T cd05047         152 ------------------KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC  213 (270)
T ss_pred             ------------------EECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence                              555555443211110  11123567999999988889999999999999999997 999997


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +.+..+....+....                       .                          .......+.++.+|+
T Consensus       214 ~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~~~~~li  244 (270)
T cd05047         214 GMTCAELYEKLPQGY-----------------------R--------------------------LEKPLNCDDEVYDLM  244 (270)
T ss_pred             ccCHHHHHHHHhCCC-----------------------C--------------------------CCCCCcCCHHHHHHH
Confidence            765544333221100                       0                          001122356789999


Q ss_pred             HHccccCCCCCCCHHHHHc
Q 015532          367 QGLLRYDPAERLKAREALR  385 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~  385 (405)
                      .+||..||.+|||+.++++
T Consensus       245 ~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         245 RQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHcccChhhCCCHHHHHH
Confidence            9999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.3e-32  Score=271.48  Aligned_cols=238  Identities=23%  Similarity=0.388  Sum_probs=155.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEec----------------CCCcEEEEEEecchhh---------------hhHHHHHHH
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN----------------EKKELVAIKIVRSINK---------------YREAAMIEI  139 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~----------------~~~~~vAiK~~~~~~~---------------~~~~~~~E~  139 (405)
                      .++|++.++||+|+||+||+|.+.                ..++.||||.++....               ..+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            468999999999999999999752                2356799999854221               122334567


Q ss_pred             HHHHHHhhcCCCCC----------------------c------------------------------------------c
Q 015532          140 DVLQRLARHDIGGT----------------------R------------------------------------------Y  155 (405)
Q Consensus       140 ~il~~l~~~~~~~~----------------------~------------------------------------------~  155 (405)
                      .++.++.|+++...                      .                                          .
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            77777766543000                      0                                          0


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCC
Q 015532          156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  235 (405)
Q Consensus       156 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  235 (405)
                      ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.                           ++|+|||++
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~---------------------------~kL~DFGla  356 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ---------------------------VKIIDFGAA  356 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCc---------------------------EEEEeCcCc
Confidence            11245678889999999999999999999999999999976554                           556666655


Q ss_pred             ccccCCc----cceecCCCcchhHHHhCCC--------------------CC--CchhHHHHHHHHHHHHhCCC-CCCCC
Q 015532          236 TFEHQDH----SYVVSTRHYRAPEVILGLG--------------------WN--YPCDLWSVGCILVELCSGEA-LFQTH  288 (405)
Q Consensus       236 ~~~~~~~----~~~~gt~~y~aPE~~~~~~--------------------~~--~~~DiwSlG~il~~lltg~~-pf~~~  288 (405)
                      .......    ....+|+.|+|||++....                    |+  .+.||||+||++|+|++|.. ||...
T Consensus       357 ~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~  436 (507)
T PLN03224        357 VDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANI  436 (507)
T ss_pred             cccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccch
Confidence            4322111    1123478999999986422                    12  34799999999999999875 67543


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ......  +.. ...            .                      ...|.............+..++..+||+.+
T Consensus       437 ~~f~~~--~~~-~~~------------~----------------------~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~  479 (507)
T PLN03224        437 RLFNTE--LRQ-YDN------------D----------------------LNRWRMYKGQKYDFSLLDRNKEAGWDLACK  479 (507)
T ss_pred             hhhhhH--Hhh-ccc------------h----------------------HHHHHhhcccCCCcccccccChHHHHHHHH
Confidence            211110  000 000            0                      000100000111112234567889999999


Q ss_pred             ccccCC---CCCCCHHHHHcCCCCCCC
Q 015532          369 LLRYDP---AERLKAREALRHPFFTRD  392 (405)
Q Consensus       369 ~L~~dP---~~Rpta~elL~hp~f~~~  392 (405)
                      ||..+|   .+|+|++|+|+||||...
T Consensus       480 LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        480 LITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             HhccCCCCcccCCCHHHHhCCCCcCCC
Confidence            999876   689999999999999764

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-33  Score=266.71  Aligned_cols=183  Identities=25%  Similarity=0.329  Sum_probs=150.0

Q ss_pred             CCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhh-hHHHHHHHHHHHHHhhcCCCCCc--
Q 015532           78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTR--  154 (405)
Q Consensus        78 ~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~E~~il~~l~~~~~~~~~--  154 (405)
                      ....|++......+++|.-...||+|+||.||+|....+ ..||||.+...... ..++..|+.++.+++|+|++...  
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            334566666777889999999999999999999998544 88999988765443 45599999999999999983211  


Q ss_pred             ---------------------------cc-cCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCCCcEEEecccccccC
Q 015532          155 ---------------------------YR-SFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 ---------------------------~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                 .. .++|....+|+.+++.||+|||..   .|||||||++|||++.       
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~-------  212 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE-------  212 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC-------
Confidence                                       11 678999999999999999999974   3999999999999864       


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccC-Cccc--e-ecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHH
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSY--V-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~ll  279 (405)
                                          +...||+|||+|..... ....  . .||.+|+|||++.....+.|+||||||+++.||+
T Consensus       213 --------------------~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllEli  272 (361)
T KOG1187|consen  213 --------------------DFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELI  272 (361)
T ss_pred             --------------------CCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHH
Confidence                                45678888888865544 2222  2 7999999999999888999999999999999999


Q ss_pred             hCCCCCCCC
Q 015532          280 SGEALFQTH  288 (405)
Q Consensus       280 tg~~pf~~~  288 (405)
                      ||+.+.+..
T Consensus       273 tgr~~~d~~  281 (361)
T KOG1187|consen  273 TGRKAVDQS  281 (361)
T ss_pred             hCCcccCCC
Confidence            999888653

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.3e-32  Score=267.83  Aligned_cols=220  Identities=20%  Similarity=0.319  Sum_probs=162.4

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh--hhhHHHHHHHHHHHHHh-hcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~-~~~~~~~~---------  154 (405)
                      ++|.+.++||+|+||.||+|++.     .+++.||||+++...  ...+.+..|+.+|.++. |++++...         
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~  116 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI  116 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence            46888999999999999999864     345689999997532  22346788999999998 88762110         


Q ss_pred             --------------------------------------------------------------------------------
Q 015532          155 --------------------------------------------------------------------------------  154 (405)
Q Consensus       155 --------------------------------------------------------------------------------  154 (405)
                                                                                                      
T Consensus       117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (401)
T cd05107         117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK  196 (401)
T ss_pred             EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence                                                                                            


Q ss_pred             ------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 ------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 ------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                                          ...+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~  276 (401)
T cd05107         197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGK  276 (401)
T ss_pred             hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCC
Confidence                                                01245566788999999999999999999999999999998765


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCCCCchhHHHHHH
Q 015532          199 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  273 (405)
Q Consensus       199 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  273 (405)
                      .+                           +|+|||++.....     ......++..|+|||.+.+..++.++|||||||
T Consensus       277 ~~---------------------------kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv  329 (401)
T cd05107         277 LV---------------------------KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGI  329 (401)
T ss_pred             EE---------------------------EEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHH
Confidence            54                           5555555433211     111235678899999999888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhh
Q 015532          274 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  352 (405)
Q Consensus       274 il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (405)
                      ++|||++ |..||......+........                      +.+.                          
T Consensus       330 il~e~l~~g~~P~~~~~~~~~~~~~~~~----------------------~~~~--------------------------  361 (401)
T cd05107         330 LLWEIFTLGGTPYPELPMNEQFYNAIKR----------------------GYRM--------------------------  361 (401)
T ss_pred             HHHHHHHcCCCCCCCCCchHHHHHHHHc----------------------CCCC--------------------------
Confidence            9999998 89999765443332211110                      0000                          


Q ss_pred             hcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       353 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ..+...+.++.+|+.+||..||++||++.+|++.
T Consensus       362 ~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         362 AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            0112346789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.1e-32  Score=255.88  Aligned_cols=216  Identities=22%  Similarity=0.333  Sum_probs=158.4

Q ss_pred             eeecccceeEEEEEecCC------------------------CcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCC
Q 015532           99 KMGEGTFGQVVECFDNEK------------------------KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGT  153 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~~~------------------------~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~  153 (405)
                      .||+|+||.||+|....+                        ...||+|++.... .....+..|+.+++.+.|+++...
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            699999999999975321                        2358999886433 234567788999999999987321


Q ss_pred             c----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCc
Q 015532          154 R----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       154 ~----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df  205 (405)
                      .                            ...+++..+..++.||+.||+|||++||+||||||+|||++..+...    
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~----  157 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE----  157 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc----
Confidence            1                            23468889999999999999999999999999999999997644210    


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHH-hCCC
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELC-SGEA  283 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~ll-tg~~  283 (405)
                                      .....++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|+|+ +|..
T Consensus       158 ----------------~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~  220 (274)
T cd05076         158 ----------------GTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEV  220 (274)
T ss_pred             ----------------CccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                            12234789999987543222 22357888999999876 46889999999999999985 6999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      ||......+........ .                                                  ......+..+.
T Consensus       221 p~~~~~~~~~~~~~~~~-~--------------------------------------------------~~~~~~~~~~~  249 (274)
T cd05076         221 PLKERTPSEKERFYEKK-H--------------------------------------------------RLPEPSCKELA  249 (274)
T ss_pred             CccccChHHHHHHHHhc-c--------------------------------------------------CCCCCCChHHH
Confidence            99765443322111100 0                                                  00112245788


Q ss_pred             HHHHHccccCCCCCCCHHHHHcC
Q 015532          364 DLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ++|.+||+.+|++|||+.++|++
T Consensus       250 ~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         250 TLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHcccChhhCcCHHHHHHh
Confidence            99999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=9.5e-34  Score=281.13  Aligned_cols=217  Identities=20%  Similarity=0.306  Sum_probs=177.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..-+..++||+|+||+||+|+...     ....||||.++...  ..+.+|.+|+++|..|+|+||+..+          
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            446778999999999999998643     34689999997543  3678899999999999999984321          


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     -..++..+...|+.||+.|++||-++.+|||||-..|+||+..      
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~------  639 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN------  639 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc------
Confidence                                           1237888999999999999999999999999999999999754      


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccce-----ecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                                           ..|||+|||+++.......+.     .-...||+||.|...+|+.++||||+||+|||+
T Consensus       640 ---------------------l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEI  698 (774)
T KOG1026|consen  640 ---------------------LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEI  698 (774)
T ss_pred             ---------------------eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhh
Confidence                                 456777777766544333222     236789999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC
Q 015532          279 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  357 (405)
Q Consensus       279 lt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (405)
                      ++ |..||.+.++.+.++.|.+-                       .-                          ...++.
T Consensus       699 FsyG~QPy~glSn~EVIe~i~~g-----------------------~l--------------------------L~~Pe~  729 (774)
T KOG1026|consen  699 FSYGKQPYYGLSNQEVIECIRAG-----------------------QL--------------------------LSCPEN  729 (774)
T ss_pred             hccccCcccccchHHHHHHHHcC-----------------------Cc--------------------------ccCCCC
Confidence            98 99999999999988876541                       11                          233467


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHH
Q 015532          358 SAGDLIDLLQGLLRYDPAERLKAREAL  384 (405)
Q Consensus       358 ~~~~l~~ll~~~L~~dP~~Rpta~elL  384 (405)
                      ++.++.+||..||+.+|++||++.||=
T Consensus       730 CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  730 CPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             CCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            788999999999999999999999874

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.3e-32  Score=252.55  Aligned_cols=216  Identities=23%  Similarity=0.318  Sum_probs=161.5

Q ss_pred             eeeecccceeEEEEEecCCC----------cEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           98 SKMGEGTFGQVVECFDNEKK----------ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~----------~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.||+|+||.||+|.+..++          ..|++|++.........+.+|+.+++.+.|+++....             
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            47999999999999998766          3588888765444367788899999999999874321             


Q ss_pred             -------------cc-cCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 -------------YR-SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 -------------~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                   .. .+++..+..++.||+.||.|||++||+||||||+|||++.++..                    
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~--------------------  140 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN--------------------  140 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc--------------------
Confidence                         11 46788899999999999999999999999999999999865411                    


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                      ......++|+|||++..... .....++..|+|||++.+.  .++.++|||||||++|+|++ |..||...+..+.....
T Consensus       141 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~  219 (259)
T cd05037         141 EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY  219 (259)
T ss_pred             cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH
Confidence            01122578889988876443 2234577889999999876  68899999999999999999 57888654322211100


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      . .                      ....                            .......+.++|.+||..||++|
T Consensus       220 ~-~----------------------~~~~----------------------------~~~~~~~~~~li~~~l~~~p~~R  248 (259)
T cd05037         220 Q-D----------------------QHRL----------------------------PMPDCAELANLINQCWTYDPTKR  248 (259)
T ss_pred             h-c----------------------CCCC----------------------------CCCCchHHHHHHHHHhccChhhC
Confidence            0 0                      0000                            00112578899999999999999


Q ss_pred             CCHHHHHc
Q 015532          378 LKAREALR  385 (405)
Q Consensus       378 pta~elL~  385 (405)
                      ||+.++++
T Consensus       249 pt~~~il~  256 (259)
T cd05037         249 PSFRAILR  256 (259)
T ss_pred             CCHHHHHH
Confidence            99999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=3.9e-32  Score=251.28  Aligned_cols=216  Identities=19%  Similarity=0.265  Sum_probs=152.4

Q ss_pred             eeeecccceeEEEEEecC--CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           98 SKMGEGTFGQVVECFDNE--KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~--~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      ++||+|+||+||+|....  ....+|+|.+...  ......+.+|+.+++.+.|+++....                   
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            369999999999996533  3457889987533  22345677899999999999984321                   


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||+|||++||+||||||+|||++.++.                      
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~----------------------  138 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLS----------------------  138 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCc----------------------
Confidence                         012346677899999999999999999999999999999977664                      


Q ss_pred             CCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhC-------CCCCCchhHHHHHHHHHHHHh-CCCCCCCC
Q 015532          222 PKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGCILVELCS-GEALFQTH  288 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~~llt-g~~pf~~~  288 (405)
                           +||+|||++......     .....++..|+|||++..       ..++.++|||||||++|+|++ |..||...
T Consensus       139 -----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (269)
T cd05042         139 -----VKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL  213 (269)
T ss_pred             -----EEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence                 455555554322111     112245678999999753       346789999999999999999 88999877


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      .+.+.+..+.....                       ..++.                     .......+..+.+++..
T Consensus       214 ~~~~~~~~~~~~~~-----------------------~~~~~---------------------~~~~~~~~~~~~~~~~~  249 (269)
T cd05042         214 SDEQVLKQVVREQD-----------------------IKLPK---------------------PQLDLKYSDRWYEVMQF  249 (269)
T ss_pred             CHHHHHHHHhhccC-----------------------ccCCC---------------------CcccccCCHHHHHHHHH
Confidence            66554443322110                       00100                     00112345677889988


Q ss_pred             ccccCCCCCCCHHHHHc
Q 015532          369 LLRYDPAERLKAREALR  385 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~  385 (405)
                      |+ .||++|||++++++
T Consensus       250 ~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         250 CW-LDPETRPTAEEVHE  265 (269)
T ss_pred             Hh-cCcccccCHHHHHH
Confidence            88 59999999999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.4e-32  Score=252.59  Aligned_cols=219  Identities=22%  Similarity=0.398  Sum_probs=163.2

Q ss_pred             CeEEEeeeecccceeEEEEEecC-CCcEEEEEEecch-----------hhhhHHHHHHHHHHHH-HhhcCCCCCc-----
Q 015532           93 RYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI-----------NKYREAAMIEIDVLQR-LARHDIGGTR-----  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~-~~~~vAiK~~~~~-----------~~~~~~~~~E~~il~~-l~~~~~~~~~-----  154 (405)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+...           ......+..|+.++.+ +.|+++....     
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            38889999999999999999987 6789999988531           1223446678887765 6777762211     


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                                                ...+++..++.++.|++.||.|||+ .||+|+||||+||+++.++.        
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~--------  152 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDK--------  152 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCc--------
Confidence                                      1246788899999999999999996 78999999999999976654        


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                                         ++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||
T Consensus       153 -------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~  213 (269)
T cd08528         153 -------------------VTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPF  213 (269)
T ss_pred             -------------------EEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcc
Confidence                               555566655433222  12346888999999999888999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       286 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      ...........+.......                                                ......+..+.+|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~l  245 (269)
T cd08528         214 YSTNMLSLATKIVEAVYEP------------------------------------------------LPEGMYSEDVTDV  245 (269)
T ss_pred             cccCHHHHHHHHhhccCCc------------------------------------------------CCcccCCHHHHHH
Confidence            7655443333222110000                                                0011345689999


Q ss_pred             HHHccccCCCCCCCHHHHHcC
Q 015532          366 LQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~h  386 (405)
                      |.+||+.||++||++.|+.++
T Consensus       246 i~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         246 ITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHCCCCCccCCCHHHHHHH
Confidence            999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=8.1e-32  Score=249.23  Aligned_cols=216  Identities=19%  Similarity=0.246  Sum_probs=151.7

Q ss_pred             eeeecccceeEEEEEec--CCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-------------------
Q 015532           98 SKMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-------------------  154 (405)
                      +.||+|+||.||+|...  .++..+|+|.++...  .....+.+|+.+++.+.|+++....                   
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            36999999999999864  345679999886543  2334677899999999999873211                   


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ....++..+..++.|++.||.|||++|++||||||+||+++..+.+                     
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~---------------------  139 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTV---------------------  139 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcE---------------------
Confidence                         0123455677899999999999999999999999999999776554                     


Q ss_pred             CCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCC-------CCCCchhHHHHHHHHHHHHh-CCCCCCCC
Q 015532          222 PKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGL-------GWNYPCDLWSVGCILVELCS-GEALFQTH  288 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwSlG~il~~llt-g~~pf~~~  288 (405)
                            +|+|||.+......     .....++..|+|||++.+.       .++.++|||||||++|+|++ |..||...
T Consensus       140 ------kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~  213 (269)
T cd05087         140 ------KIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL  213 (269)
T ss_pred             ------EECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence                  55555544322111     1123567889999998642       35789999999999999996 99999776


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ...+.........                       ....+.                     .......+..+.+++.+
T Consensus       214 ~~~~~~~~~~~~~-----------------------~~~~~~---------------------~~~~~~~~~~~~~l~~~  249 (269)
T cd05087         214 SDEQVLTYTVREQ-----------------------QLKLPK---------------------PRLKLPLSDRWYEVMQF  249 (269)
T ss_pred             ChHHHHHHHhhcc-----------------------cCCCCC---------------------CccCCCCChHHHHHHHH
Confidence            5544332211100                       000000                     00011235578899999


Q ss_pred             ccccCCCCCCCHHHHHc
Q 015532          369 LLRYDPAERLKAREALR  385 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~  385 (405)
                      |+ .+|++|||++||+.
T Consensus       250 c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         250 CW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             Hh-cCcccCCCHHHHHH
Confidence            98 68999999999984

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.7e-32  Score=253.07  Aligned_cols=233  Identities=22%  Similarity=0.316  Sum_probs=163.6

Q ss_pred             CCeEEEeeeecccceeEEEEEec----CCCcEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~----~~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|++.+.||+|+||.||+|+..    .+++.||||+++....  ..+.+..|+++++.+.|+++....           
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            45888899999999999999864    3478999999975444  356788999999999998873211           


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.                
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~----------------  147 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDL----------------  147 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC----------------
Confidence                               113677888999999999999999999999999999999976654                


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCcc------ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                 ++|+|||.+........      ...++..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus       148 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~  216 (284)
T cd05038         148 -----------VKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP  216 (284)
T ss_pred             -----------EEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence                       45555555544331111      1234556999999988889999999999999999999999986532


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ...     ....+..+...                         ............    .........+.++.+|+.+|
T Consensus       217 ~~~-----~~~~~~~~~~~-------------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~c  262 (284)
T cd05038         217 AEF-----LRMIGIAQGQM-------------------------IVTRLLELLKEG----ERLPRPPSCPDEVYDLMKLC  262 (284)
T ss_pred             chh-----ccccccccccc-------------------------cHHHHHHHHHcC----CcCCCCccCCHHHHHHHHHH
Confidence            211     00011000000                         000000000000    00011123456899999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |+.||++|||+.|+++
T Consensus       263 l~~~p~~Rpt~~ei~~  278 (284)
T cd05038         263 WEAEPQDRPSFADLIL  278 (284)
T ss_pred             hccChhhCCCHHHHHH
Confidence            9999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.98  E-value=7.8e-32  Score=276.55  Aligned_cols=218  Identities=22%  Similarity=0.345  Sum_probs=175.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC-----cEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~-----~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .+-++.+.||+|+||.||.|....-.     ..||||.+++.  ....+.|++|..+|..++|+|++...          
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            45678899999999999999876432     34999999765  44567899999999999999984321          


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...++......++.||++|++||+++++|||||-..|+|++..             
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~-------------  838 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER-------------  838 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc-------------
Confidence                                    2346778899999999999999999999999999999998764             


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCccce-----ecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  284 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~p  284 (405)
                                    ..+||+|||+|+.......+.     .-...|||||.+....++.|+|||||||++||++| |..|
T Consensus       839 --------------r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~P  904 (1025)
T KOG1095|consen  839 --------------RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATP  904 (1025)
T ss_pred             --------------CcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCC
Confidence                          357777777777433332221     22457999999999999999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       285 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      |...++.+.+....                       .+++++.|.                          .+++.+.+
T Consensus       905 Y~~~~n~~v~~~~~-----------------------~ggRL~~P~--------------------------~CP~~ly~  935 (1025)
T KOG1095|consen  905 YPSRSNFEVLLDVL-----------------------EGGRLDPPS--------------------------YCPEKLYQ  935 (1025)
T ss_pred             CCCcchHHHHHHHH-----------------------hCCccCCCC--------------------------CCChHHHH
Confidence            99998887765332                       233554443                          44667889


Q ss_pred             HHHHccccCCCCCCCHHHHHc
Q 015532          365 LLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~  385 (405)
                      +|.+||+.+|++||++..|++
T Consensus       936 lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  936 LMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHHHHccCChhhCccHHHHHh
Confidence            999999999999999999987

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.98  E-value=3.3e-31  Score=245.06  Aligned_cols=215  Identities=20%  Similarity=0.243  Sum_probs=150.9

Q ss_pred             eeecccceeEEEEEecCC--CcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc--------------------
Q 015532           99 KMGEGTFGQVVECFDNEK--KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR--------------------  154 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~~~--~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~--------------------  154 (405)
                      .||+|+||.||+|....+  ...+++|.++...  ...+.+.+|+.+++.++|+++....                    
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            699999999999975433  3456777765432  3456788999999999999884321                    


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.                        
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~------------------------  137 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLT------------------------  137 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCcc------------------------
Confidence                       112345567789999999999999999999999999999976664                        


Q ss_pred             CCCceeccCCCCccccC-----CccceecCCCcchhHHHhC-------CCCCCchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 015532          224 SSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGCILVELCS-GEALFQTHEN  290 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~  290 (405)
                         ++|+|||++.....     ......++..|+|||++..       ..++.++|||||||++|+|++ |..||...+.
T Consensus       138 ---~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~  214 (268)
T cd05086         138 ---VKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD  214 (268)
T ss_pred             ---EEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH
Confidence               45555555432111     1122467889999999853       235789999999999999997 6788877666


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+.+..+.....                       ...+.                     .......++.+.+++..|+
T Consensus       215 ~~~~~~~~~~~~-----------------------~~~~~---------------------~~~~~~~~~~~~~l~~~c~  250 (268)
T cd05086         215 REVLNHVIKDQQ-----------------------VKLFK---------------------PQLELPYSERWYEVLQFCW  250 (268)
T ss_pred             HHHHHHHHhhcc-----------------------cccCC---------------------CccCCCCcHHHHHHHHHHh
Confidence            554443321100                       00000                     0011234567889999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 015532          371 RYDPAERLKAREALR  385 (405)
Q Consensus       371 ~~dP~~Rpta~elL~  385 (405)
                       .+|++|||++++++
T Consensus       251 -~~P~~Rp~~~~i~~  264 (268)
T cd05086         251 -LSPEKRATAEEVHR  264 (268)
T ss_pred             -hCcccCCCHHHHHH
Confidence             68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-33  Score=258.00  Aligned_cols=243  Identities=25%  Similarity=0.423  Sum_probs=181.3

Q ss_pred             EeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--------hhhhHHHHHHHHHHHHHhhcCCCCCc-
Q 015532           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--------NKYREAAMIEIDVLQRLARHDIGGTR-  154 (405)
Q Consensus        84 ~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--------~~~~~~~~~E~~il~~l~~~~~~~~~-  154 (405)
                      +.....+.+||-++..||+|+|+.||+|.|...+++||+|+-...        ..+.....+|..|.+.|.|+.|+... 
T Consensus       455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD  534 (775)
T KOG1151|consen  455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD  534 (775)
T ss_pred             hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence            334456788999999999999999999999999999999986432        23445677899999999999885432 


Q ss_pred             ---------------------------cccCCHHHHHHHHHHHHHHHHHHHHC--CcEecCCCCCcEEEecccccccCCc
Q 015532          155 ---------------------------YRSFPIDLVRELGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       155 ---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIli~~~~~~k~~df  205 (405)
                                                 ...+++.+++.|+.||+.||.||.+.  -|||-||||.|||+.+..       
T Consensus       535 yfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt-------  607 (775)
T KOG1151|consen  535 YFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT-------  607 (775)
T ss_pred             eeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc-------
Confidence                                       24568999999999999999999965  699999999999997532       


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCc----------cceecCCCcchhHHHhCC----CCCCchhHHHH
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGL----GWNYPCDLWSV  271 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~----~~~~~~DiwSl  271 (405)
                                       ..+.+||.|||+++....+.          +...||.+|++||.+.-.    ..+.|+||||+
T Consensus       608 -----------------acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSv  670 (775)
T KOG1151|consen  608 -----------------ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSV  670 (775)
T ss_pred             -----------------ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEee
Confidence                             22345555555554433221          225799999999988643    37889999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          272 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       272 G~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |||+|..+.|+.||......+.+.+-..++                    +.....+|                      
T Consensus       671 GVIFyQClYGrKPFGhnqsQQdILqeNTIl--------------------kAtEVqFP----------------------  708 (775)
T KOG1151|consen  671 GVIFYQCLYGRKPFGHNQSQQDILQENTIL--------------------KATEVQFP----------------------  708 (775)
T ss_pred             ehhhhhhhccCCCCCCchhHHHHHhhhchh--------------------cceeccCC----------------------
Confidence            999999999999997654332221111111                    00011111                      


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                        ..+-++.++++||++||++.-++|....++..||||.-...
T Consensus       709 --~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~r  749 (775)
T KOG1151|consen  709 --PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIR  749 (775)
T ss_pred             --CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchhh
Confidence              12345778999999999999999999999999999986443

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.8e-32  Score=260.09  Aligned_cols=216  Identities=22%  Similarity=0.307  Sum_probs=167.2

Q ss_pred             EEEeeeecccceeEEEEEecCCCc---E-EEEEEecc----hhhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           95 RILSKMGEGTFGQVVECFDNEKKE---L-VAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~~~~~---~-vAiK~~~~----~~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+.++||+|+||.||+|+.+..+.   . ||||..+.    .......+++|.++|+.++|+|++...            
T Consensus       160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv  239 (474)
T KOG0194|consen  160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV  239 (474)
T ss_pred             cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence            446899999999999999875422   3 89999874    244567889999999999999983221            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...++..+...++.+.+.||+|||++++|||||-.+|+|++.++.+                  
T Consensus       240 mEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~v------------------  301 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVV------------------  301 (474)
T ss_pred             EEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeE------------------
Confidence                            1248889999999999999999999999999999999999876644                  


Q ss_pred             cCCCCCCCceeccCCCCccccCCc--c-ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH--S-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  294 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~--~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~  294 (405)
                               ||+|||+++....-.  . ...-...|+|||.+....|+.++|||||||++||+++ |..||.+....+..
T Consensus       302 ---------KISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~  372 (474)
T KOG0194|consen  302 ---------KISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK  372 (474)
T ss_pred             ---------EeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH
Confidence                     555555544332100  0 1123568999999999899999999999999999998 89999999988777


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.....+.+                                                .+...+..+..++.+|+..||
T Consensus       373 ~kI~~~~~r~~------------------------------------------------~~~~~p~~~~~~~~~c~~~~p  404 (474)
T KOG0194|consen  373 AKIVKNGYRMP------------------------------------------------IPSKTPKELAKVMKQCWKKDP  404 (474)
T ss_pred             HHHHhcCccCC------------------------------------------------CCCCCHHHHHHHHHHhccCCh
Confidence            66633211111                                                112335678899999999999


Q ss_pred             CCCCCHHHHHc
Q 015532          375 AERLKAREALR  385 (405)
Q Consensus       375 ~~Rpta~elL~  385 (405)
                      ++|+|+.++.+
T Consensus       405 ~~R~tm~~i~~  415 (474)
T KOG0194|consen  405 EDRPTMSTIKK  415 (474)
T ss_pred             hhccCHHHHHH
Confidence            99999998875

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.97  E-value=8.1e-32  Score=225.73  Aligned_cols=181  Identities=20%  Similarity=0.412  Sum_probs=141.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc--hhhhhHHHHHHHHHHHHHhhcCCCC-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGG-----------------  152 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~--~~~~~~~~~~E~~il~~l~~~~~~~-----------------  152 (405)
                      +....+..||+|+||.|-+.++..+|...|+|.++.  .++.....++|+++..+...-....                 
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME  125 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME  125 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence            335567889999999999999999999999999964  3344566777887766543322210                 


Q ss_pred             --------------CccccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          153 --------------TRYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       153 --------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                    .....++|..+-+++..++.||.|||++ .|||||+||+||||+..|                   
T Consensus       126 ~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-------------------  186 (282)
T KOG0984|consen  126 LMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-------------------  186 (282)
T ss_pred             HhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC-------------------
Confidence                          1135678999999999999999999975 899999999999998766                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCCccc--eecCCCcchhHHHhC----CCCCCchhHHHHHHHHHHHHhCCCCCCC-CCh
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILG----LGWNYPCDLWSVGCILVELCSGEALFQT-HEN  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~~lltg~~pf~~-~~~  290 (405)
                              ++|+||||++....+....  -.|...|||||.+..    ..|+.++||||||+++.||.+++.||.. .++
T Consensus       187 --------qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp  258 (282)
T KOG0984|consen  187 --------QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP  258 (282)
T ss_pred             --------cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence                    5777888877665544322  468889999999864    3699999999999999999999999975 456


Q ss_pred             HHHHHHHHH
Q 015532          291 LEHLAMMER  299 (405)
Q Consensus       291 ~~~~~~i~~  299 (405)
                      .+++.++.+
T Consensus       259 F~qLkqvVe  267 (282)
T KOG0984|consen  259 FQQLKQVVE  267 (282)
T ss_pred             HHHHHHHhc
Confidence            666665544

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.97  E-value=4.9e-30  Score=243.64  Aligned_cols=225  Identities=23%  Similarity=0.293  Sum_probs=175.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCcc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRY-------------  155 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~~-------------  155 (405)
                      .++..+.++||+|.||.|.+|.-. .+..||||+++...  ..+..+..||++|.+|.|||++....             
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence            467889999999999999999864 46889999997543  34678999999999999999843220             


Q ss_pred             ----------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          156 ----------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       156 ----------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                      ..........++.||+.|+.||.+.++|||||.+.|+|++.                       
T Consensus       616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~-----------------------  672 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDG-----------------------  672 (807)
T ss_pred             HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecC-----------------------
Confidence                            11223345669999999999999999999999999999864                       


Q ss_pred             CCCCCCCceeccCCCCccccCCccc-----eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh--CCCCCCCCChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS--GEALFQTHENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt--g~~pf~~~~~~~  292 (405)
                          +.++||+|||+++.......+     .+-...|||+|.+.-++++.++|+|+||+++||+++  .+.||....+.+
T Consensus       673 ----e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~  748 (807)
T KOG1094|consen  673 ----EFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ  748 (807)
T ss_pred             ----cccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH
Confidence                456788888887754433332     345789999999999999999999999999999865  889998888877


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ........+...+...                                          ....+.-++..+.++|.+|+.+
T Consensus       749 vven~~~~~~~~~~~~------------------------------------------~l~~P~~cp~~lyelml~Cw~~  786 (807)
T KOG1094|consen  749 VVENAGEFFRDQGRQV------------------------------------------VLSRPPACPQGLYELMLRCWRR  786 (807)
T ss_pred             HHHhhhhhcCCCCcce------------------------------------------eccCCCcCcHHHHHHHHHHhch
Confidence            7766555443222110                                          1112234566888999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      |-++|||.+++-.
T Consensus       787 es~~RPsFe~lh~  799 (807)
T KOG1094|consen  787 ESEQRPSFEQLHL  799 (807)
T ss_pred             hhhcCCCHHHHHH
Confidence            9999999999854

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=3e-30  Score=233.56  Aligned_cols=212  Identities=36%  Similarity=0.547  Sum_probs=161.5

Q ss_pred             cceeEEEEEecCCCcEEEEEEecchhhh--hHHHHHHHHHHHHHhhcCCCCCc---------------------------
Q 015532          104 TFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTR---------------------------  154 (405)
Q Consensus       104 ~fg~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~E~~il~~l~~~~~~~~~---------------------------  154 (405)
                      +||.||+|.+..+++.||+|++......  .+.+..|++.++++.|+++....                           
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            5899999999988999999998654322  46788999999999888762110                           


Q ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCC
Q 015532          155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS  234 (405)
Q Consensus       155 ~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  234 (405)
                      ...+++..+..++.+++.+|.|||+.||+|+||+|+||+++.++                           .++|+|||.
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~---------------------------~~~l~d~~~  133 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDG---------------------------HVKLADFGL  133 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCC---------------------------cEEEccccc
Confidence            11267888999999999999999999999999999999997655                           456666666


Q ss_pred             CccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHHHH
Q 015532          235 TTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-HLAMMERVLGPLPHHMVIR  311 (405)
Q Consensus       235 a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~-~~~~i~~~~g~~p~~~~~~  311 (405)
                      +......  .....++..|++||.+.+..++.++||||||+++|+|++|..||......+ ....+.......       
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------  206 (244)
T smart00220      134 ARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-------  206 (244)
T ss_pred             eeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-------
Confidence            5544332  233467889999999988888999999999999999999999997733322 222111100000       


Q ss_pred             hhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCC
Q 015532          312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f  389 (405)
                                                              ......++..+.+++.+||..||++||++.++++||||
T Consensus       207 ----------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      207 ----------------------------------------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             ----------------------------------------ccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence                                                    00000145688999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-31  Score=264.14  Aligned_cols=225  Identities=24%  Similarity=0.302  Sum_probs=161.2

Q ss_pred             eEEEeeeeccccee-EEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc-CCCCCc---------c-------
Q 015532           94 YRILSKMGEGTFGQ-VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTR---------Y-------  155 (405)
Q Consensus        94 y~~~~~LG~G~fg~-V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~-~~~~~~---------~-------  155 (405)
                      |.-.+.+|.|+-|+ ||+|...  ++.||||.+-  ......+.+||..|+.-+.| |++...         |       
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll--~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLL--EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHh--hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            44457899998875 6999874  7899999873  23445678999999987654 442211         0       


Q ss_pred             --------c---cC---CHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          156 --------R---SF---PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       156 --------~---~l---~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                              .   .+   .....+.++.|++.||++||+.+||||||||.||||+...                      .
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~----------------------~  644 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS----------------------A  644 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC----------------------C
Confidence                    0   00   1123467889999999999999999999999999998632                      1


Q ss_pred             CCCCCceeccCCCCccccCCcc------ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHENLEHL  294 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg-~~pf~~~~~~~~~  294 (405)
                      +....++|+|||+++......+      ...||-+|+|||++....-+.++||+||||++|+.++| .+||......+  
T Consensus       645 ~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--  722 (903)
T KOG1027|consen  645 DGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--  722 (903)
T ss_pred             CcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--
Confidence            2345678888888876554432      35799999999999998888899999999999999885 99997543221  


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..|..-.                                              ..+ .........++.|||.+||.+||
T Consensus       723 ~NIl~~~----------------------------------------------~~L-~~L~~~~d~eA~dLI~~ml~~dP  755 (903)
T KOG1027|consen  723 ANILTGN----------------------------------------------YTL-VHLEPLPDCEAKDLISRMLNPDP  755 (903)
T ss_pred             hhhhcCc----------------------------------------------cce-eeeccCchHHHHHHHHHhcCCCc
Confidence            1111100                                              000 00001111278899999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDV  393 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~  393 (405)
                      ..||+|.++|.||||=...
T Consensus       756 ~~RPsa~~VL~HPlFW~~e  774 (903)
T KOG1027|consen  756 QLRPSATDVLNHPLFWDSE  774 (903)
T ss_pred             ccCCCHHHHhCCCccCChH
Confidence            9999999999999995543

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-30  Score=252.35  Aligned_cols=221  Identities=19%  Similarity=0.312  Sum_probs=174.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCC---CcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ...+.++||+|.||+||+|.+...   ...||||+++...  .....|++|+.+|.+|.|++++..+             
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~E  190 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFE  190 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhh
Confidence            345678999999999999998643   2469999997543  2467899999999999999974322             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...|.......|+.||+.|+.||.++++|||||-..|||+-...                     
T Consensus       191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr---------------------  249 (1039)
T KOG0199|consen  191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR---------------------  249 (1039)
T ss_pred             hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc---------------------
Confidence                           23456677788999999999999999999999999999986544                     


Q ss_pred             CCCCCCCceeccCCCCccccCCcccee------cCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                            .|||+|||+.+........++      -...|+|||.+....++.++|+|++||++|||++ |+.||.+....+
T Consensus       250 ------tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q  323 (1039)
T KOG0199|consen  250 ------TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ  323 (1039)
T ss_pred             ------eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH
Confidence                  467777777665544433221      2457999999999999999999999999999998 899999999988


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ++..|..-                       .++                          ..+..+++++.+++.+||..
T Consensus       324 IL~~iD~~-----------------------erL--------------------------pRPk~csedIY~imk~cWah  354 (1039)
T KOG0199|consen  324 ILKNIDAG-----------------------ERL--------------------------PRPKYCSEDIYQIMKNCWAH  354 (1039)
T ss_pred             HHHhcccc-----------------------ccC--------------------------CCCCCChHHHHHHHHHhccC
Confidence            88776421                       011                          12245678899999999999


Q ss_pred             CCCCCCCHHHHHcCCCC
Q 015532          373 DPAERLKAREALRHPFF  389 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f  389 (405)
                      +|++|||+..|.+.-+.
T Consensus       355 ~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  355 NPADRPTFSAIREDLVL  371 (1039)
T ss_pred             CccccccHHHHHHhHHH
Confidence            99999999988654443

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.97  E-value=8.4e-31  Score=250.35  Aligned_cols=213  Identities=25%  Similarity=0.404  Sum_probs=171.6

Q ss_pred             EEeeeecccceeEEEEEecCC----CcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           96 ILSKMGEGTFGQVVECFDNEK----KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~----~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.+.||.|.||.||+|....-    .--||||..+..  ....+.++.|..+|+.++|++|+...               
T Consensus       393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~  472 (974)
T KOG4257|consen  393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELA  472 (974)
T ss_pred             HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecc
Confidence            356799999999999987533    335999998763  34578899999999999999985422               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...++......++.||+.||.|||+..+|||||-..|||+.+..                        
T Consensus       473 ~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~------------------------  528 (974)
T KOG4257|consen  473 PLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ------------------------  528 (974)
T ss_pred             cchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc------------------------
Confidence                        24567778888999999999999999999999999999997643                        


Q ss_pred             CCCCceeccCCCCccccCCccc----eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDHSY----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                         .|||+|||++++.+....+    ..-...|||||.+.-..++.++|||-|||.+||++. |..||.+-.+.+.+..+
T Consensus       529 ---CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i  605 (974)
T KOG4257|consen  529 ---CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI  605 (974)
T ss_pred             ---eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe
Confidence               5788888888877665433    123567999999988899999999999999999987 99999998777665544


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ++                       |.+++.|                          +.+++.+..|+.+||.+||.+|
T Consensus       606 En-----------------------GeRlP~P--------------------------~nCPp~LYslmskcWayeP~kR  636 (974)
T KOG4257|consen  606 EN-----------------------GERLPCP--------------------------PNCPPALYSLMSKCWAYEPSKR  636 (974)
T ss_pred             cC-----------------------CCCCCCC--------------------------CCCChHHHHHHHHHhccCcccC
Confidence            32                       2233333                          4567789999999999999999


Q ss_pred             CCHHHHH
Q 015532          378 LKAREAL  384 (405)
Q Consensus       378 pta~elL  384 (405)
                      |+..|+.
T Consensus       637 Prftei~  643 (974)
T KOG4257|consen  637 PRFTEIK  643 (974)
T ss_pred             CcHHHHH
Confidence            9887765

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.97  E-value=2.8e-31  Score=259.44  Aligned_cols=217  Identities=22%  Similarity=0.311  Sum_probs=179.2

Q ss_pred             CeEEEeeeecccceeEEEEEecCCC---cEEEEEEecc--hhhhhHHHHHHHHHHHHHhhcCCCC---------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGG---------------  152 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~---~~vAiK~~~~--~~~~~~~~~~E~~il~~l~~~~~~~---------------  152 (405)
                      .-.|.++||.|.||.|++|+.+..+   ..||||.++.  .++.+.+|+.|..||-+++||||+.               
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            4578899999999999999988655   4799999975  4567788999999999999999832               


Q ss_pred             -------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          153 -------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       153 -------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                   ...+.|+..+...+++.|+.|++||-++|+|||||-..|||++++-                     
T Consensus       710 EyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL---------------------  768 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL---------------------  768 (996)
T ss_pred             hhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce---------------------
Confidence                         1235677888899999999999999999999999999999997654                     


Q ss_pred             CCCCCCCceeccCCCCccccCCccc----eec--CCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSY----VVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~----~~g--t~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                            ..|++|||+++..+++...    .-|  ...|.|||.+.-.+++.++||||+||+|||.++ |+.||...++.+
T Consensus       769 ------vCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd  842 (996)
T KOG0196|consen  769 ------VCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  842 (996)
T ss_pred             ------EEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence                  4566666666655443311    112  458999999999999999999999999999776 999999999999


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..|++...-+|+                                                 -+++..+.+|+..||++
T Consensus       843 VIkaIe~gyRLPpP-------------------------------------------------mDCP~aL~qLMldCWqk  873 (996)
T KOG0196|consen  843 VIKAIEQGYRLPPP-------------------------------------------------MDCPAALYQLMLDCWQK  873 (996)
T ss_pred             HHHHHHhccCCCCC-------------------------------------------------CCCcHHHHHHHHHHHHH
Confidence            99888776543332                                                 24567899999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      |-.+||+..||++
T Consensus       874 dR~~RP~F~qiV~  886 (996)
T KOG0196|consen  874 DRNRRPKFAQIVS  886 (996)
T ss_pred             HhhcCCCHHHHHH
Confidence            9999999999987

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-30  Score=246.23  Aligned_cols=215  Identities=20%  Similarity=0.350  Sum_probs=173.7

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------c-
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------Y-  155 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------~-  155 (405)
                      .....+||-|.||.||.|.++.-.-.||||.++......++|+.|..+|+.+.|+|++..+                 + 
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG  348 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG  348 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence            3456899999999999999999888999999998888889999999999999999974422                 1 


Q ss_pred             -----------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          156 -----------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       156 -----------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                 ..++.-...+++.||..|++||..+++|||||-..|+|++.+.                          
T Consensus       349 NLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh--------------------------  402 (1157)
T KOG4278|consen  349 NLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--------------------------  402 (1157)
T ss_pred             cHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc--------------------------
Confidence                       1234445677889999999999999999999999999997544                          


Q ss_pred             CCceeccCCCCccccCCccc-eec---CCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 015532          225 SAIKLIDFGSTTFEHQDHSY-VVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER  299 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~~-~~g---t~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~  299 (405)
                       .||++|||++++...+..+ ..|   .+.|.|||.+.-+.++.|+|||+|||+|||+.| |..||.+.+-.+....+.+
T Consensus       403 -iVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk  481 (1157)
T KOG4278|consen  403 -IVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK  481 (1157)
T ss_pred             -eEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc
Confidence             5677777777766554432 223   567999999998899999999999999999998 9999999776555443332


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                                             +-++                          +.++.+++.+.+|++.||+|+|.+||+
T Consensus       482 -----------------------gyRM--------------------------~~PeGCPpkVYeLMraCW~WsPsDRPs  512 (1157)
T KOG4278|consen  482 -----------------------GYRM--------------------------DGPEGCPPKVYELMRACWNWSPSDRPS  512 (1157)
T ss_pred             -----------------------cccc--------------------------cCCCCCCHHHHHHHHHHhcCCcccCcc
Confidence                                   2122                          233466778999999999999999999


Q ss_pred             HHHHH
Q 015532          380 AREAL  384 (405)
Q Consensus       380 a~elL  384 (405)
                      ..|+-
T Consensus       513 FaeiH  517 (1157)
T KOG4278|consen  513 FAEIH  517 (1157)
T ss_pred             HHHHH
Confidence            88764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=2.5e-30  Score=273.25  Aligned_cols=178  Identities=20%  Similarity=0.214  Sum_probs=137.0

Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCC
Q 015532          156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  235 (405)
Q Consensus       156 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  235 (405)
                      ..+++.+++.++.||+.||.|||++||+||||||+||||+..|.+|++|||++.....        +....+|++|||++
T Consensus        75 ~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~--------~~~~~~ki~DfG~a  146 (793)
T PLN00181         75 RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS--------DEDATTKSREIGSS  146 (793)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc--------cccCcccccccccc
Confidence            4588999999999999999999999999999999999999999999999998754322        23457899999998


Q ss_pred             ccccCC-------------------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          236 TFEHQD-------------------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       236 ~~~~~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                      +.....                   ....+||+.|||||++.+..|+.++|||||||++|||++|.+|+....  ..+..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~  224 (793)
T PLN00181        147 RREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSS  224 (793)
T ss_pred             cccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHH
Confidence            643210                   011468999999999999999999999999999999999988875321  11111


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +...  ..|...                                               ........+++.+||+.||.+
T Consensus       225 ~~~~--~~~~~~-----------------------------------------------~~~~~~~~~~~~~~L~~~P~~  255 (793)
T PLN00181        225 LRHR--VLPPQI-----------------------------------------------LLNWPKEASFCLWLLHPEPSC  255 (793)
T ss_pred             HHHh--hcChhh-----------------------------------------------hhcCHHHHHHHHHhCCCChhh
Confidence            1110  001000                                               001234568899999999999


Q ss_pred             CCCHHHHHcCCCCCCC
Q 015532          377 RLKAREALRHPFFTRD  392 (405)
Q Consensus       377 Rpta~elL~hp~f~~~  392 (405)
                      |||+.|+|+||||...
T Consensus       256 Rps~~eil~h~~~~~~  271 (793)
T PLN00181        256 RPSMSELLQSEFINEP  271 (793)
T ss_pred             CcChHHHhhchhhhhh
Confidence            9999999999999864

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.96  E-value=5e-30  Score=243.36  Aligned_cols=167  Identities=27%  Similarity=0.450  Sum_probs=143.7

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHH---------HHHHHHHHHh---hcCCCCCc------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM---------IEIDVLQRLA---RHDIGGTR------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~---------~E~~il~~l~---~~~~~~~~------  154 (405)
                      .|..++.||+|+||.|++|.++.....|+||.|.+.+...+.++         .||+||..|+   |+||.+.+      
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            49999999999999999999999999999999977554444443         4999999999   88874322      


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...++|.+++.|++||+.|+++||++||||||||-+|++++.+|              
T Consensus       642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g--------------  707 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG--------------  707 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC--------------
Confidence                                  35678999999999999999999999999999999999998766              


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCc-cceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCCCC
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                   .+||+|||.|....... ..++||..|.|||++.|.+|- ..-|||+||++||.++..+.||.
T Consensus       708 -------------~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  708 -------------FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             -------------eEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence                         47888889887665443 457999999999999999875 66899999999999999999985

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=1.9e-30  Score=249.84  Aligned_cols=231  Identities=25%  Similarity=0.393  Sum_probs=183.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-hhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .+.|+++.++|+|+||.||+|+++.+++..|+|+++.... .-.....|+-+++..+|+||+...               
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy   93 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY   93 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence            4679999999999999999999999999999999975332 234456799999999999983221               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  -+.+++.++..++++.+.||+|||++|-+|||||-.|||+++.|.                       
T Consensus        94 cgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gD-----------------------  150 (829)
T KOG0576|consen   94 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGD-----------------------  150 (829)
T ss_pred             cCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCc-----------------------
Confidence                        246789999999999999999999999999999999999987765                       


Q ss_pred             CCCCceeccCCCCccccC---CccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                          +|++|||.+..+..   ....+.||++|||||+..   ...|+..+|||++|++..|+..-++|.-.......+..
T Consensus       151 ----vklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L  226 (829)
T KOG0576|consen  151 ----VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL  226 (829)
T ss_pred             ----eeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH
Confidence                45555555433322   233468999999999874   45799999999999999999988888766666666665


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      |.+-...+|.                                             .+.....++.|.+|++.+|..+|.+
T Consensus       227 mTkS~~qpp~---------------------------------------------lkDk~kws~~fh~fvK~altknpKk  261 (829)
T KOG0576|consen  227 MTKSGFQPPT---------------------------------------------LKDKTKWSEFFHNFVKGALTKNPKK  261 (829)
T ss_pred             hhccCCCCCc---------------------------------------------ccCCccchHHHHHHHHHHhcCCCcc
Confidence            5443322221                                             1112345778999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDV  393 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~  393 (405)
                      |||++.+|.|||+++..
T Consensus       262 RptaeklL~h~fvs~~l  278 (829)
T KOG0576|consen  262 RPTAEKLLQHPFVSQTL  278 (829)
T ss_pred             CCChhhheeceeeccch
Confidence            99999999999999873

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-28  Score=227.00  Aligned_cols=176  Identities=24%  Similarity=0.326  Sum_probs=133.9

Q ss_pred             CceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHH--HhhcCCCCCc----
Q 015532           81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTR----  154 (405)
Q Consensus        81 ~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~--l~~~~~~~~~----  154 (405)
                      ..++-....+..+-.+.+.||+|.||.||+|.++  |+.||||++...++  ..+.+|.+|.+.  |+|+||.+..    
T Consensus       200 GlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE--~SWfrEtEIYqTvmLRHENILgFIaaD~  275 (513)
T KOG2052|consen  200 GLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE--RSWFRETEIYQTVMLRHENILGFIAADN  275 (513)
T ss_pred             CchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccch--hhhhhHHHHHHHHHhccchhhhhhhccc
Confidence            3444455677788999999999999999999987  88899999976443  445666666654  7899884422    


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHHHC--------CcEecCCCCCcEEEeccccc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~--------givHrDlkp~NIli~~~~~~  200 (405)
                                                ...++.+...+++..++.||.+||-.        .|.|||||..|||+..+|.+
T Consensus       276 ~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C  355 (513)
T KOG2052|consen  276 KDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  355 (513)
T ss_pred             cCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence                                      13467788999999999999999942        49999999999999999988


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCC----CC--CchhHHHHHHH
Q 015532          201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG----WN--YPCDLWSVGCI  274 (405)
Q Consensus       201 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~----~~--~~~DiwSlG~i  274 (405)
                      .|+|+||+.+...+.            ..+|.        .....+||..|||||++...-    +.  ..+||||||.+
T Consensus       356 ~IADLGLAv~h~~~t------------~~idi--------~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLV  415 (513)
T KOG2052|consen  356 CIADLGLAVRHDSDT------------DTIDI--------PPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLV  415 (513)
T ss_pred             EEeeceeeEEecccC------------CcccC--------CCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHH
Confidence            888888775543321            11221        223358999999999997531    21  45899999999


Q ss_pred             HHHHHh
Q 015532          275 LVELCS  280 (405)
Q Consensus       275 l~~llt  280 (405)
                      +||++.
T Consensus       416 lWEiar  421 (513)
T KOG2052|consen  416 LWEIAR  421 (513)
T ss_pred             HHHHHH
Confidence            999975

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.96  E-value=1.2e-28  Score=266.84  Aligned_cols=164  Identities=17%  Similarity=0.250  Sum_probs=129.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ..|...+.||+|+||.||+|++..+++.||||.++.....   ...|++++++++|++++...                 
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~  766 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIE  766 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCC
Confidence            3466778999999999999999889999999998653322   23468899999999984321                 


Q ss_pred             -------cccCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 -------YRSFPIDLVRELGRQLLESVAFMH---ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 -------~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                             ...+++..+..++.||+.||+|||   +.+|+||||||+||+++.++..++                      
T Consensus       767 ~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~----------------------  824 (968)
T PLN00113        767 GKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL----------------------  824 (968)
T ss_pred             CCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE----------------------
Confidence                   123678899999999999999999   669999999999999976543222                      


Q ss_pred             CCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                           . ||.+...... ....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       825 -----~-~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        825 -----R-LSLPGLLCTD-TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             -----E-eccccccccC-CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence                 1 3322221111 123678999999999988999999999999999999999999953

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=8.7e-29  Score=230.40  Aligned_cols=246  Identities=23%  Similarity=0.301  Sum_probs=157.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHH--HHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQ--RLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~--~l~~~~~~~~~---------------  154 (405)
                      ...++.+.||+|.||.||+|...  ++.||||++...+  .+.+..|-+|..  .+.|+||....               
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            44677899999999999999975  6899999996543  344666665554  46677763211               


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHH---------CCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHE---------LRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~---------~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                     ...+++....+++..|+.||+|||+         ..|+|||||..|||+.+++++.|+||||+.+
T Consensus       286 Vt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~  365 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR  365 (534)
T ss_pred             EeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence                           2356889999999999999999996         2699999999999999888776666665533


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCC-CC-----CchhHHHHHHHHHHHHhCCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WN-----YPCDLWSVGCILVELCSGEAL  284 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DiwSlG~il~~lltg~~p  284 (405)
                      ....                   ..   ..+...-+||..|||||++.|.- +.     .+.||||+|.++|||++.-.-
T Consensus       366 ~~p~-------------------~~---~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~  423 (534)
T KOG3653|consen  366 LEPG-------------------KP---QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTD  423 (534)
T ss_pred             ecCC-------------------CC---CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            2211                   00   01111258999999999998742 22     468999999999999987655


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       285 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      +......+...-....+|.-|..-     +.-.....+..+..|++          .|.         .+  .....+.+
T Consensus       424 ~~~~~vp~Yqlpfe~evG~hPt~e-----~mq~~VV~kK~RP~~p~----------~W~---------~h--~~~~~l~e  477 (534)
T KOG3653|consen  424 ADPGPVPEYQLPFEAEVGNHPTLE-----EMQELVVRKKQRPKIPD----------AWR---------KH--AGMAVLCE  477 (534)
T ss_pred             ccCCCCCcccCchhHHhcCCCCHH-----HHHHHHHhhccCCCChh----------hhh---------cC--ccHHHHHH
Confidence            432111111111222233333110     00011111122222222          111         11  22447899


Q ss_pred             HHHHccccCCCCCCCHHH------HHcCCCC
Q 015532          365 LLQGLLRYDPAERLKARE------ALRHPFF  389 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~e------lL~hp~f  389 (405)
                      .+..||..||+.|.||.=      .|.|.|=
T Consensus       478 t~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~  508 (534)
T KOG3653|consen  478 TIEECWDHDAEARLTAGCVEERMAELMMLWE  508 (534)
T ss_pred             HHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence            999999999999999853      3456663

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2.8e-27  Score=232.54  Aligned_cols=216  Identities=22%  Similarity=0.250  Sum_probs=164.3

Q ss_pred             eEEEeeeecccceeEEEEEecCCC----cEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~----~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .+..++||+|+||+||+|.+...|    -+||||++....  +...+++.|+-+|.+|.|+++.+.+             
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq  777 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQ  777 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHH
Confidence            445689999999999999986555    368999986543  3467789999999999999985432             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+-....+.+..||++|+.|||++++|||||-..|||+....++|+                  
T Consensus       778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvki------------------  839 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKI------------------  839 (1177)
T ss_pred             hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEE------------------
Confidence                          133445667789999999999999999999999999999987665555                  


Q ss_pred             CCCCCCceeccCCCCccccCCccc-----eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  294 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~  294 (405)
                               .|||+++........     -.-.+.|||-|.+....|+.++|||||||++||++| |..|+.+....++-
T Consensus       840 ---------tdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~  910 (1177)
T KOG1025|consen  840 ---------TDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP  910 (1177)
T ss_pred             ---------EecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh
Confidence                     455554433322211     123567999999999999999999999999999998 99999887654432


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                                             ++++.+-++.-|                          +..+-++.-++.+||..|+
T Consensus       911 -----------------------dlle~geRLsqP--------------------------piCtiDVy~~mvkCwmid~  941 (1177)
T KOG1025|consen  911 -----------------------DLLEKGERLSQP--------------------------PICTIDVYMVMVKCWMIDA  941 (1177)
T ss_pred             -----------------------HHHhccccCCCC--------------------------CCccHHHHHHHHHHhccCc
Confidence                                   233334333333                          2345577889999999999


Q ss_pred             CCCCCHHHHHc
Q 015532          375 AERLKAREALR  385 (405)
Q Consensus       375 ~~Rpta~elL~  385 (405)
                      ..||+++++.+
T Consensus       942 ~~rp~fkel~~  952 (1177)
T KOG1025|consen  942 DSRPTFKELAE  952 (1177)
T ss_pred             ccCccHHHHHH
Confidence            99999998764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5e-28  Score=210.80  Aligned_cols=234  Identities=24%  Similarity=0.309  Sum_probs=168.7

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC-CCCc-------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGTR-------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~-~~~~-------------  154 (405)
                      .+.+.|.|.+.||+|.||.+-+|+++.++..+++|.+........++.+|...--.|.+|.. +...             
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            35678999999999999999999999999999999997766666778888766555555433 1110             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+-|...+.++.|+++|++|+|++++||||||.+||||-..                       
T Consensus       101 qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-----------------------  157 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-----------------------  157 (378)
T ss_pred             eccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-----------------------
Confidence                          1235677889999999999999999999999999999999542                       


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-----CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQTHENLE-HL  294 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~-~~  294 (405)
                        +...+||||||..+..........-+..|.+||++...     ..++.+|+|.||+++|.++||.+||......+ -.
T Consensus       158 --df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y  235 (378)
T KOG1345|consen  158 --DFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPY  235 (378)
T ss_pred             --CccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchH
Confidence              23379999999987765544444456679999987642     24678999999999999999999997432211 11


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ....+..+                                          ...+ .........++.+..+.++-|..++
T Consensus       236 ~~~~~w~~------------------------------------------rk~~-~~P~~F~~fs~~a~r~Fkk~lt~~~  272 (378)
T KOG1345|consen  236 WEWEQWLK------------------------------------------RKNP-ALPKKFNPFSEKALRLFKKSLTPRF  272 (378)
T ss_pred             HHHHHHhc------------------------------------------ccCc-cCchhhcccCHHHHHHHHHhcCCcc
Confidence            11111110                                          0011 0111223456788889999999999


Q ss_pred             CCC---CCHHHHHcCCCCC
Q 015532          375 AER---LKAREALRHPFFT  390 (405)
Q Consensus       375 ~~R---pta~elL~hp~f~  390 (405)
                      ++|   .++......-|..
T Consensus       273 ~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  273 KDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             cccchhHHHHHHHHHHHHH
Confidence            999   5666655555653

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=3.4e-27  Score=204.15  Aligned_cols=156  Identities=23%  Similarity=0.263  Sum_probs=113.8

Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCC
Q 015532          156 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  235 (405)
Q Consensus       156 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  235 (405)
                      ..+++.+++.++.||+.||.|||+++      ||+|||++.++.+                           ++  ||++
T Consensus        12 ~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~---------------------------~~--fG~~   56 (176)
T smart00750       12 RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLL---------------------------KL--DGSV   56 (176)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccce---------------------------ee--ccce
Confidence            35899999999999999999999998      9999999766544                           44  5555


Q ss_pred             ccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHHHHhhH
Q 015532          236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-HLAMMERVLGPLPHHMVIRADR  314 (405)
Q Consensus       236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~-~~~~i~~~~g~~p~~~~~~~~~  314 (405)
                      .......  ..||+.|+|||++.+..++.++|||||||++|||++|..||....... .+..+.......          
T Consensus        57 ~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------  124 (176)
T smart00750       57 AFKTPEQ--SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD----------  124 (176)
T ss_pred             Eeecccc--CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC----------
Confidence            4433221  258899999999999999999999999999999999999996543321 122111111000          


Q ss_pred             hhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch--HHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          315 RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA--GDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                                  .... .                    ......+  ..+.++|.+||..||++|||+.|+++|+|+..
T Consensus       125 ------------~~~~-~--------------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      125 ------------DPRD-R--------------------SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             ------------Cccc-c--------------------ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence                        0000 0                    0000112  26899999999999999999999999999764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=5.4e-26  Score=231.85  Aligned_cols=217  Identities=24%  Similarity=0.449  Sum_probs=163.5

Q ss_pred             CeEEEeeeecccceeEEEEEecC-------CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhc-CCCCCc--------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARH-DIGGTR--------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~-~~~~~~--------  154 (405)
                      +..+.+.||+|.||.||+|....       ....||||.++..  ....+.+..|+++|+.+.+| |+....        
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~  376 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP  376 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence            34566799999999999997541       1457999998643  24567788999999999854 431100        


Q ss_pred             --------------------c---------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccc
Q 015532          155 --------------------Y---------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  199 (405)
Q Consensus       155 --------------------~---------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~  199 (405)
                                          .               ..++......++.||+.|++||++..+|||||-..|||+..+. 
T Consensus       377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~-  455 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK-  455 (609)
T ss_pred             eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC-
Confidence                                1               1278888999999999999999999999999999999997543 


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccce----ec--CCCcchhHHHhCCCCCCchhHHHHHH
Q 015532          200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV----VS--TRHYRAPEVILGLGWNYPCDLWSVGC  273 (405)
Q Consensus       200 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~----~g--t~~y~aPE~~~~~~~~~~~DiwSlG~  273 (405)
                                                .+||+|||+|+.......+.    .|  ...|||||.+....|+.++||||+||
T Consensus       456 --------------------------~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI  509 (609)
T KOG0200|consen  456 --------------------------VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGI  509 (609)
T ss_pred             --------------------------EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHH
Confidence                                      56777777776544333221    12  33599999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCC-hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          274 ILVELCS-GEALFQTHE-NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       274 il~~llt-g~~pf~~~~-~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      +|||+++ |..||.+.. ..+.+.                       +...|.++.-|                      
T Consensus       510 ~L~EifsLG~~PYp~~~~~~~l~~-----------------------~l~~G~r~~~P----------------------  544 (609)
T KOG0200|consen  510 LLWEIFTLGGTPYPGIPPTEELLE-----------------------FLKEGNRMEQP----------------------  544 (609)
T ss_pred             HHHHHhhCCCCCCCCCCcHHHHHH-----------------------HHhcCCCCCCC----------------------
Confidence            9999998 999998744 323222                       22233333333                      


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                          ..++.++.++++.|++.+|++||+..++.+
T Consensus       545 ----~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  545 ----EHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             ----CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence                345678889999999999999999998875

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.93  E-value=5.8e-26  Score=206.92  Aligned_cols=219  Identities=18%  Similarity=0.221  Sum_probs=164.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      ..|++....+-+|.||.||.|.+++.     .+.|-+|.++..  ......++.|--.|..+.|+|+....         
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            46788999999999999999976532     345667766532  23345567788888888898873211         


Q ss_pred             ---------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          155 ---------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       155 ---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                                                 -+.++..+...++.|++.|++|||++||||.||-..|++|++.-         
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~L---------  433 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQL---------  433 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhe---------
Confidence                                       12345567778899999999999999999999999999997644         


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccCCccce-----ecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-C
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G  281 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g  281 (405)
                                        ++||+|-.+++..-......     .....||+||.+.+..|+.++|+||||+++|||+| |
T Consensus       434 ------------------qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg  495 (563)
T KOG1024|consen  434 ------------------QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLG  495 (563)
T ss_pred             ------------------eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcC
Confidence                              45666655554332222111     23557999999999999999999999999999998 9


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      +.|+...++.+....+..                       |-++.-                          +-+++++
T Consensus       496 ~~PyaeIDPfEm~~ylkd-----------------------GyRlaQ--------------------------P~NCPDe  526 (563)
T KOG1024|consen  496 KLPYAEIDPFEMEHYLKD-----------------------GYRLAQ--------------------------PFNCPDE  526 (563)
T ss_pred             CCCccccCHHHHHHHHhc-----------------------cceecC--------------------------CCCCcHH
Confidence            999988887776544422                       222222                          2356789


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHc
Q 015532          362 LIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      +..++.-||..+|++||+.+|+..
T Consensus       527 Lf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  527 LFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHHHHHHHhcCcccCCCHHHHHH
Confidence            999999999999999999999864

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=4.5e-25  Score=194.75  Aligned_cols=180  Identities=38%  Similarity=0.591  Sum_probs=148.1

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc-----------------------
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR-----------------------  154 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~-----------------------  154 (405)
                      ||+|++|.||++.+..+++.+++|++.....  ..+.+.+|+++++.+.|+++....                       
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999988899999999976443  246788999999999987652211                       


Q ss_pred             ---c--ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEec-ccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          155 ---Y--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       155 ---~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~-~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                         .  ..+++..+..++.+++.+|.+||++|++|+||+|.||+++. .+                           .++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~---------------------------~~~  133 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNG---------------------------KVK  133 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCC---------------------------cEE
Confidence               0  24778889999999999999999999999999999999976 44                           466


Q ss_pred             eccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 015532          229 LIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL  304 (405)
Q Consensus       229 l~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~  304 (405)
                      |+|||.+......   .....+...|++||.+... .++.+.|+|++|+++++|             .            
T Consensus       134 l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------~------------  188 (215)
T cd00180         134 LADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------P------------  188 (215)
T ss_pred             EecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------H------------
Confidence            6777666544433   2334678889999999887 788999999999999998             0            


Q ss_pred             ChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHH
Q 015532          305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL  384 (405)
Q Consensus       305 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL  384 (405)
                                                                              .+.+++.+||..||++||++.+++
T Consensus       189 --------------------------------------------------------~~~~~l~~~l~~~p~~R~~~~~l~  212 (215)
T cd00180         189 --------------------------------------------------------ELKDLIRKMLQKDPEKRPSAKEIL  212 (215)
T ss_pred             --------------------------------------------------------HHHHHHHHHhhCCcccCcCHHHHh
Confidence                                                                    456899999999999999999999


Q ss_pred             cCC
Q 015532          385 RHP  387 (405)
Q Consensus       385 ~hp  387 (405)
                      +|+
T Consensus       213 ~~~  215 (215)
T cd00180         213 EHL  215 (215)
T ss_pred             hCC
Confidence            875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.92  E-value=2e-24  Score=193.47  Aligned_cols=171  Identities=39%  Similarity=0.581  Sum_probs=138.4

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      |.+.+.||.|++|.||++.+..+++.+|+|.+.....  ..+.+.+|++.++.+.|+++....                 
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            5678999999999999999998899999999975432  456788899999999888763211                 


Q ss_pred             ----------ccc-CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 ----------YRS-FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 ----------~~~-l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                ... +++..+..++.+++.+|.+||+++++|+||+|.||+++..+                         
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~-------------------------  135 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDG-------------------------  135 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------------------
Confidence                      122 77888999999999999999999999999999999997654                         


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHH-hCCCCCCchhHHHHHHHHHHHHhCCCCCCC-CChH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVI-LGLGWNYPCDLWSVGCILVELCSGEALFQT-HENL  291 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~~lltg~~pf~~-~~~~  291 (405)
                        .++|+|||.+.......    ....++..|++||.+ ....++.++|+|+||+++++|++|+.||.. .++.
T Consensus       136 --~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~  207 (225)
T smart00221      136 --LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT  207 (225)
T ss_pred             --CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence              46667777665444332    345778899999998 566788899999999999999999999976 3443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.92  E-value=1e-25  Score=227.76  Aligned_cols=232  Identities=26%  Similarity=0.412  Sum_probs=170.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc------cccCCHHHHHH
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR------YRSFPIDLVRE  165 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~------~~~l~~~~~~~  165 (405)
                      ..|..++.|..|+||.||+++|+.+.+.+|+|+ ++.+..    ++-  |+.....+..++..      .+.++.     
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li----lRn--ilt~a~npfvvgDc~tllk~~g~lPv-----  150 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI----LRN--ILTFAGNPFVVGDCATLLKNIGPLPV-----  150 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhcc-cccchh----hhc--cccccCCcceechhhhhcccCCCCcc-----
Confidence            468999999999999999999999999999964 332211    111  44444444443221      122222     


Q ss_pred             HHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccC-Cccc
Q 015532          166 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSY  244 (405)
Q Consensus       166 ~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~  244 (405)
                         +++.+++|||+.||+|||+||+|.+|..-|++|++|||+.+........        .++  .=++.....+ ....
T Consensus       151 ---dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at--------nl~--eg~I~k~t~Ef~dKq  217 (1205)
T KOG0606|consen  151 ---DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT--------NLK--EGHIEKDTHEFQDKQ  217 (1205)
T ss_pred             ---hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc--------hhh--hcchHHHHHHhhhcc
Confidence               3378999999999999999999999999999999999987654332211        000  0001111111 1123


Q ss_pred             eecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCC
Q 015532          245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA  324 (405)
Q Consensus       245 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~  324 (405)
                      ++||+.|+|||++...+|+..+|+|++|+|+|+.+.|..||.+++.++.+.++......                     
T Consensus       218 vcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~---------------------  276 (1205)
T KOG0606|consen  218 VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---------------------  276 (1205)
T ss_pred             ccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc---------------------
Confidence            68999999999999999999999999999999999999999999999888777654332                     


Q ss_pred             cccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC---CHHHHHcCCCCCCCCCC
Q 015532          325 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL---KAREALRHPFFTRDVRR  395 (405)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp---ta~elL~hp~f~~~~~~  395 (405)
                         |++.                       .+...++++++|.++|+.+|..|.   .+-++.+|+||+.-.+.
T Consensus       277 ---wpE~-----------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  277 ---WPEE-----------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             ---cccc-----------------------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence               3321                       134467899999999999999997   57888999999976554

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.90  E-value=8.2e-23  Score=183.06  Aligned_cols=176  Identities=24%  Similarity=0.328  Sum_probs=143.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCC------------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG------------------  152 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~------------------  152 (405)
                      .-.|++.++||+|+||+++.|...-+++.||||.-.. ....-++..|....+.|.+..-+.                  
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            3469999999999999999999999999999996532 223344566888777776532110                  


Q ss_pred             ----------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          153 ----------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       153 ----------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                ...+.|+..++..++.|++.-++|+|++.+|.|||||+|+||+..+.                      .
T Consensus       106 LGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~----------------------k  163 (449)
T KOG1165|consen  106 LGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGT----------------------K  163 (449)
T ss_pred             hCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCC----------------------C
Confidence                      11467899999999999999999999999999999999999987552                      2


Q ss_pred             CCCCceeccCCCCccccCCc----------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                      ....+.++|||+|+...+..          ....||..||+--...|...+.+.|+-|||-+++..|-|..||.+..
T Consensus       164 ~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  164 DANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             CCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence            34468899999998665433          23679999999999999999999999999999999999999998754

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1.2e-24  Score=219.49  Aligned_cols=232  Identities=22%  Similarity=0.326  Sum_probs=159.4

Q ss_pred             CCe-EEEeeeecccceeEEEEEecCCCcEEEEEEec----chhh---hhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           92 PRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINK---YREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        92 ~~y-~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~----~~~~---~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      ..| .....+|.|++|.|+.+......+.++.|..+    ....   .......|+-+-..|.|+++....         
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~  396 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI  396 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc
Confidence            445 45678999999988888887766666666543    2111   111133455555566666642211         


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+...++..++.|++.||+|||++||.|||||++|+++...|.+                 
T Consensus       397 ~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~l-----------------  459 (601)
T KOG0590|consen  397 LQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGIL-----------------  459 (601)
T ss_pred             hhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCce-----------------
Confidence                             1146667888899999999999999999999999999999887755                 


Q ss_pred             ccCCCCCCCceeccCCCCccccC-------CccceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                ||+|||.+.....       .....+|+..|+|||++.+..|+ ...||||.|++++.|.+|+.||....
T Consensus       460 ----------ki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~  529 (601)
T KOG0590|consen  460 ----------KIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAK  529 (601)
T ss_pred             ----------EEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccc
Confidence                      5555554432211       11235899999999999999998 56899999999999999999996543


Q ss_pred             hHHHHH-HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          290 NLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       290 ~~~~~~-~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ..+... .+                             ...........             .......++...+.+|.+
T Consensus       530 ~~~~~~~~~-----------------------------~~~~~~~~~~~-------------~~~~~~~lp~~~~~~~~~  567 (601)
T KOG0590|consen  530 KSDNSFKTN-----------------------------NYSDQRNIFEG-------------PNRLLSLLPRETRIIIYR  567 (601)
T ss_pred             ccccchhhh-----------------------------ccccccccccC-------------hHHHHHhchhhHHHHHHH
Confidence            322110 00                             00000000001             111122345678899999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ||++||.+|.|+++|++.+||+..
T Consensus       568 ~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  568 MLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HccCChhheecHHHHhhChHhhhc
Confidence            999999999999999999999874

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.90  E-value=2.3e-23  Score=178.92  Aligned_cols=177  Identities=25%  Similarity=0.344  Sum_probs=141.8

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCC-----------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-----------------  152 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~-----------------  152 (405)
                      +.++|.++++||+|+||.+|+|....+|+.||||+-++.. .......|..+...|.+..-..                 
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            3478999999999999999999999999999999865432 3445677888887776532100                 


Q ss_pred             -----------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          153 -----------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       153 -----------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                 ...+.|+..++.-++-|++.-++|+|.+++|||||||+|+|++-.-                       
T Consensus        92 LLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgr-----------------------  148 (341)
T KOG1163|consen   92 LLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGR-----------------------  148 (341)
T ss_pred             ccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeecccc-----------------------
Confidence                       0135678889999999999999999999999999999999987543                       


Q ss_pred             CCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                       ....+.|+|||+|+...+.          .....||..|.+--...+...+.+.|+-|+|.++..+.-|..||.+....
T Consensus       149 -h~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~  227 (341)
T KOG1163|consen  149 -HCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA  227 (341)
T ss_pred             -ccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence             2235788999988654332          22368999999988888878889999999999999999999999986544

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.89  E-value=6.2e-23  Score=207.96  Aligned_cols=225  Identities=22%  Similarity=0.329  Sum_probs=154.8

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHhhcCCCCC--------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGT--------------  153 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~~~~~~~~--------------  153 (405)
                      .|...+.||++.|=+|.+|++.+ |. |+||++-+..     ..-.+.+.|++ ...++++|....              
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR  100 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR  100 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence            58888999999999999999864 43 8899984322     11233444555 555566665321              


Q ss_pred             ------ccc------cCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          154 ------RYR------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       154 ------~~~------~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                            +|.      -+..-+.+.|+.||+.||.-||..||+|+|||.+||||++-+.+.++||.-.+....+.+     
T Consensus       101 qyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD-----  175 (1431)
T KOG1240|consen  101 QYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED-----  175 (1431)
T ss_pred             HHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCC-----
Confidence                  122      234567888999999999999999999999999999999999999999976554333221     


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC----------C-CCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL----------G-WNYPCDLWSVGCILVELCS-GEALFQTHE  289 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwSlG~il~~llt-g~~pf~~~~  289 (405)
                            --+||++-.......      ..|+|||.+...          . .+++.||||+||+++||++ |++||.-  
T Consensus       176 ------NPadf~fFFDTSrRR------tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--  241 (1431)
T KOG1240|consen  176 ------NPADFTFFFDTSRRR------TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--  241 (1431)
T ss_pred             ------CcccceEEEecCCce------eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--
Confidence                  235676543322222      259999998642          2 5678999999999999988 7999942  


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                        .++....+...                                           ..++...+..+  +..+++||..|
T Consensus       242 --SQL~aYr~~~~-------------------------------------------~~~e~~Le~Ie--d~~~Rnlil~M  274 (1431)
T KOG1240|consen  242 --SQLLAYRSGNA-------------------------------------------DDPEQLLEKIE--DVSLRNLILSM  274 (1431)
T ss_pred             --HHHHhHhccCc-------------------------------------------cCHHHHHHhCc--CccHHHHHHHH
Confidence              11111110000                                           00111111111  23689999999


Q ss_pred             cccCCCCCCCHHHHHcC
Q 015532          370 LRYDPAERLKAREALRH  386 (405)
Q Consensus       370 L~~dP~~Rpta~elL~h  386 (405)
                      ++.||++|.+|++.|+-
T Consensus       275 i~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  275 IQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HccCchhccCHHHHHHh
Confidence            99999999999999974

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.89  E-value=4.7e-22  Score=188.64  Aligned_cols=177  Identities=28%  Similarity=0.358  Sum_probs=138.3

Q ss_pred             CeEEEeeeecccceeEEEEEecCCC-cEEEEEEecchhhh-hHHHHHHHHHHHHHhh----cCC------CC--------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKY-REAAMIEIDVLQRLAR----HDI------GG--------  152 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~-~~vAiK~~~~~~~~-~~~~~~E~~il~~l~~----~~~------~~--------  152 (405)
                      +|.+.++||+|+||.||+|.+..++ ..+|+|+....... ...+..|+.++..+..    ..+      ..        
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            8999999999999999999998774 67899987653222 2257789999999984    111      10        


Q ss_pred             ---------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          153 ---------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       153 ---------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                     ...+.|+..++..++.|++.+|++||+.|++||||||+|++++..+.                  
T Consensus        99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~------------------  160 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSR------------------  160 (322)
T ss_pred             EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCC------------------
Confidence                           00256889999999999999999999999999999999999975420                  


Q ss_pred             ccCCCCCCCceeccCCCCc--cc---------cC-C-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCC
Q 015532          218 FKNLPKSSAIKLIDFGSTT--FE---------HQ-D-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  284 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~--~~---------~~-~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~p  284 (405)
                          .....+.|.|||+++  ..         .. . ...+.||..|.++.+..+...+.+.|+||++.++.+++.|..|
T Consensus       161 ----~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LP  236 (322)
T KOG1164|consen  161 ----SEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLP  236 (322)
T ss_pred             ----cccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCC
Confidence                012357777777776  21         01 1 1235699999999999999999999999999999999999999


Q ss_pred             CCCCChH
Q 015532          285 FQTHENL  291 (405)
Q Consensus       285 f~~~~~~  291 (405)
                      |.+....
T Consensus       237 W~~~~~~  243 (322)
T KOG1164|consen  237 WEALEMT  243 (322)
T ss_pred             Ccccccc
Confidence            9776543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.88  E-value=4.5e-22  Score=181.31  Aligned_cols=169  Identities=24%  Similarity=0.270  Sum_probs=105.8

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhh----------cCC--------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLAR----------HDI--------  150 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~----------~~~--------  150 (405)
                      .+...+.||.|+|+.||.+++..|++.+|||++....    ..-+.+.+|.-....+.+          -.+        
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            3567889999999999999999999999999984321    122333333322221111          000        


Q ss_pred             -CCC-----------cc------------------------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCC
Q 015532          151 -GGT-----------RY------------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLK  188 (405)
Q Consensus       151 -~~~-----------~~------------------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlk  188 (405)
                       .+.           .+                              ..+.......+..|+++.+++||+.||+|+|||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence             000           00                              001112224455899999999999999999999


Q ss_pred             CCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC--------
Q 015532          189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--------  260 (405)
Q Consensus       189 p~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--------  260 (405)
                      |+|++++.+|.+.++||+.+                           ............+..|.+||.....        
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~---------------------------~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~  225 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSL---------------------------VRAGTRYRCSEFPVAFTPPELESCAGQFGQNNA  225 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGE---------------------------EETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred             eeeEEEcCCCCEEEcChHHH---------------------------eecCceeeccCCCcccCChhhhhhhcccCcccc
Confidence            99999988886666665532                           2211111111335679999987542        


Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          261 GWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       261 ~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                      .++.+.|.|+||+++|.|++|..||...
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            4788999999999999999999999754

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=3.1e-22  Score=190.05  Aligned_cols=164  Identities=18%  Similarity=0.196  Sum_probs=110.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecC-CCcEEEEEEecch------hhhhHHHHHHHHHHHHHhhcCCCCCcc-------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRY-------  155 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~-~~~~vAiK~~~~~------~~~~~~~~~E~~il~~l~~~~~~~~~~-------  155 (405)
                      +.++|.+.+.||+|+||+||+|++.. +++.||||++...      ....+.+.+|+++|+.+.|+++....+       
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~L   95 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGL   95 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEE
Confidence            45789999999999999999999876 6788899986422      223566889999999999998753110       


Q ss_pred             -------ccCCH---HHHHHHHHHHHHHHHHHHHCCcEecCC-CCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          156 -------RSFPI---DLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       156 -------~~l~~---~~~~~~~~qi~~aL~~LH~~givHrDl-kp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                             ..+..   .....++.|++.||.|||++||+|||| ||+|||++.++.++|+|||++......+.        
T Consensus        96 VmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~--------  167 (365)
T PRK09188         96 VRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGA--------  167 (365)
T ss_pred             EEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcc--------
Confidence                   11111   012568899999999999999999999 99999997666555555544332211100        


Q ss_pred             CCceeccCCCCccccCCccceecCCCcchhHHHhCCC------CCCchhHH
Q 015532          225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG------WNYPCDLW  269 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Diw  269 (405)
                             .+.. ..........+++.|+|||.+....      .+...|-|
T Consensus       168 -------~~~~-~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        168 -------LYRI-AAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             -------hhhh-hhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence                   0000 0001113457888899999886421      23446666

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.87  E-value=6.6e-23  Score=198.30  Aligned_cols=211  Identities=23%  Similarity=0.344  Sum_probs=156.8

Q ss_pred             eeecccceeEEEEEec---CCCcEEEEEEecchh---hhhHHHHHHHHHHHHHh-hcCCCC-------------------
Q 015532           99 KMGEGTFGQVVECFDN---EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGG-------------------  152 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~-~~~~~~-------------------  152 (405)
                      .+|+|.||.|++++..   ..+..+|+|+.++..   ..+.....|-.++..++ ++.++.                   
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            4799999999887543   457789999886422   11223445777777776 333211                   


Q ss_pred             --------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          153 --------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       153 --------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                              .....+.+...+.+...++.+++++|+.||+|||+|++||+++.+|++++.|||+                 
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfgl-----------------  143 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGL-----------------  143 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchh-----------------
Confidence                    1134466778888999999999999999999999999999998888665555554                 


Q ss_pred             CCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 015532          225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL  304 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~  304 (405)
                                ++..-..... +||..|||||++.  ++...+|+||+|+++|+|++|..||.+    +...+|.+..-.+
T Consensus       144 ----------ske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~  206 (612)
T KOG0603|consen  144 ----------SKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEM  206 (612)
T ss_pred             ----------hhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCC
Confidence                      4332222222 8999999999998  577889999999999999999999987    5555555443344


Q ss_pred             ChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC-----
Q 015532          305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK-----  379 (405)
Q Consensus       305 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt-----  379 (405)
                      |..                                                  .+..+.+++..|+..+|.+|.-     
T Consensus       207 p~~--------------------------------------------------l~~~a~~~~~~l~~r~p~nrLg~~~~~  236 (612)
T KOG0603|consen  207 PRE--------------------------------------------------LSAEARSLFRQLFKRNPENRLGAGPDG  236 (612)
T ss_pred             chh--------------------------------------------------hhHHHHHHHHHHHhhCHHHHhccCcch
Confidence            433                                                  3557889999999999999984     


Q ss_pred             HHHHHcCCCCCCCC
Q 015532          380 AREALRHPFFTRDV  393 (405)
Q Consensus       380 a~elL~hp~f~~~~  393 (405)
                      +.|+++|+||+.-.
T Consensus       237 ~~eik~h~f~~~i~  250 (612)
T KOG0603|consen  237 VDEIKQHEFFQSID  250 (612)
T ss_pred             hHHHhccchheeee
Confidence            58999999998754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.86  E-value=1.6e-20  Score=176.77  Aligned_cols=229  Identities=33%  Similarity=0.461  Sum_probs=168.4

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcC-CCCCc--------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHD-IGGTR--------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~-~~~~~--------------  154 (405)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+.....    ....+.+|+.++..+.++. +....              
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            788999999999999999987   7789999865332    3567888999999999884 52110              


Q ss_pred             -------------c---ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 -------------Y---RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 -------------~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                   .   ..+....+..++.|++.++.|+|+.|++|||+||+||+++..+.                   
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~-------------------  139 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR-------------------  139 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC-------------------
Confidence                         1   15788899999999999999999999999999999999976541                   


Q ss_pred             cCCCCCCCceeccCCCCccccC---------CccceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQ---------DHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                             .++++|||.+.....         ......||..|++||.+.+   ..+....|+||+|++++++++|..||.
T Consensus       140 -------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~  212 (384)
T COG0515         140 -------VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFE  212 (384)
T ss_pred             -------eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence                   356666665543222         1244689999999999988   578899999999999999999999987


Q ss_pred             CCCh----HHHHHHHHHHhCC-CChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          287 THEN----LEHLAMMERVLGP-LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       287 ~~~~----~~~~~~i~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ....    ......+.....+ ...                    ....                      .........
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~----------------------~~~~~~~~~  250 (384)
T COG0515         213 GEKNSSATSQTLKIILELPTPSLAS--------------------PLSP----------------------SNPELISKA  250 (384)
T ss_pred             CCCccccHHHHHHHHHhcCCccccc--------------------ccCc----------------------cccchhhHH
Confidence            7653    2222222221111 000                    0000                      000112346


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +.+++.+++..+|..|.+..+...++|.....
T Consensus       251 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~  282 (384)
T COG0515         251 ASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK  282 (384)
T ss_pred             HHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence            78999999999999999999999887776543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=5.5e-20  Score=168.66  Aligned_cols=150  Identities=24%  Similarity=0.329  Sum_probs=107.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccc
Q 015532          159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE  238 (405)
Q Consensus       159 ~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  238 (405)
                      +.....-++.|+++|+.|||++||.|||+|.+|||+.-+.                       |.-..+.++|||++-..
T Consensus       339 s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eldd-----------------------D~~P~LVvaDFGCcLAd  395 (598)
T KOG4158|consen  339 SYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDD-----------------------DEIPQLVVADFGCCLAD  395 (598)
T ss_pred             chHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecC-----------------------CCCcEEEEcccceeeec
Confidence            4456677899999999999999999999999999996542                       23445788888876332


Q ss_pred             cC---------CccceecCCCcchhHHHhCCC-----CC-CchhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHh
Q 015532          239 HQ---------DHSYVVSTRHYRAPEVILGLG-----WN-YPCDLWSVGCILVELCSGEALFQTHENLEH--LAMMERVL  301 (405)
Q Consensus       239 ~~---------~~~~~~gt~~y~aPE~~~~~~-----~~-~~~DiwSlG~il~~lltg~~pf~~~~~~~~--~~~i~~~~  301 (405)
                      +.         .....-|.-..||||+....+     .+ .++|.|+.|.+.||+++...||.+......  -..-+..+
T Consensus       396 ~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL  475 (598)
T KOG4158|consen  396 DNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL  475 (598)
T ss_pred             cccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC
Confidence            21         112235788899999987532     12 579999999999999999999987332110  00001111


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                      .                                                  ..++.+++.+++|+..+|+.||.+|+++.
T Consensus       476 P--------------------------------------------------alp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  476 P--------------------------------------------------ALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             C--------------------------------------------------CCcccCChHHHHHHHHHhcCCccccCCcc
Confidence            1                                                  12345677899999999999999999853

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.80  E-value=2.4e-20  Score=177.31  Aligned_cols=157  Identities=30%  Similarity=0.472  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCcccc
Q 015532          160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  239 (405)
Q Consensus       160 ~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  239 (405)
                      ....+.++.|+..|++|   +|.+|||+||.||++..+..+||.|||++.......                  ......
T Consensus       358 ~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~------------------~~~~~~  416 (516)
T KOG1033|consen  358 LSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDE------------------TVAPAA  416 (516)
T ss_pred             hhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCC------------------cccchh
Confidence            34566788999999999   999999999999998777666666666543322111                  000001


Q ss_pred             CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHH-HhCCCChHHHHHhhHhhH
Q 015532          240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHENLEHLAMMER-VLGPLPHHMVIRADRRAE  317 (405)
Q Consensus       240 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg-~~pf~~~~~~~~~~~i~~-~~g~~p~~~~~~~~~~~~  317 (405)
                      ...+.-+||..||+||.+.+..|+.++||||||++++||+.- ...|      +....+.. .-|.+|+.++        
T Consensus       417 a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~------er~~t~~d~r~g~ip~~~~--------  482 (516)
T KOG1033|consen  417 ASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF------ERIATLTDIRDGIIPPEFL--------  482 (516)
T ss_pred             hhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH------HHHHhhhhhhcCCCChHHh--------
Confidence            122335899999999999999999999999999999999862 2222      11111111 0122222111        


Q ss_pred             HhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCC
Q 015532          318 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                                                            .+ .+.-.+|+.+||...|.+||++.+.--|+|.+
T Consensus       483 --------------------------------------~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  483 --------------------------------------QD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             --------------------------------------hc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence                                                  11 12445899999999999999888888888753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.79  E-value=3.1e-19  Score=158.06  Aligned_cols=153  Identities=10%  Similarity=0.114  Sum_probs=107.1

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhh----------HHHHHHHHHHHHHhhcCCCCCcc--
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----------EAAMIEIDVLQRLARHDIGGTRY--  155 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~----------~~~~~E~~il~~l~~~~~~~~~~--  155 (405)
                      +-+.++|++++.||.|+||.||++.+  ++..+|||+++......          +.+.+|++.+.++.|+++.....  
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~  104 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY  104 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence            34678999999999999999999765  36679999996432211          12578999999999988632110  


Q ss_pred             ---------------------ccCCHHHH----HHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          156 ---------------------RSFPIDLV----RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       156 ---------------------~~l~~~~~----~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                           ...+....    .....+++.+|..||+.|++|||+||+||+++.+|            
T Consensus       105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g------------  172 (232)
T PRK10359        105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG------------  172 (232)
T ss_pred             eecccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC------------
Confidence                                 00111111    23567999999999999999999999999997543            


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHH
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~ll  279 (405)
                                      ++|+|||..........         .-.++....|+.++|+||||+++..+.
T Consensus       173 ----------------i~liDfg~~~~~~e~~a---------~d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        173 ----------------LRIIDLSGKRCTAQRKA---------KDRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ----------------EEEEECCCcccccchhh---------HHHHHHHhHhcccccccceeEeehHHH
Confidence                            67777776654322111         111344556778999999999877653

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.78  E-value=1.5e-18  Score=151.63  Aligned_cols=98  Identities=26%  Similarity=0.258  Sum_probs=77.1

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhh---h------------------------hHHHHHHHHHHHHHhhcC
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---Y------------------------REAAMIEIDVLQRLARHD  149 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~------------------------~~~~~~E~~il~~l~~~~  149 (405)
                      .+.||+|+||.||+|.+. +|+.||||+++....   .                        ......|++++.++.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999999999999986 899999999964311   0                        112235999999998754


Q ss_pred             CCC------------------C-------ccccCCHHHHHHHHHHHHHHHHHH-HHCCcEecCCCCCcEEEe
Q 015532          150 IGG------------------T-------RYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLKPENILLV  195 (405)
Q Consensus       150 ~~~------------------~-------~~~~l~~~~~~~~~~qi~~aL~~L-H~~givHrDlkp~NIli~  195 (405)
                      +..                  .       ....+++..+..++.|++.+|.|+ |+.||+||||||+|||++
T Consensus        81 v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~  152 (190)
T cd05147          81 IPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH  152 (190)
T ss_pred             CCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE
Confidence            311                  0       023467788999999999999999 699999999999999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.76  E-value=6.1e-18  Score=146.80  Aligned_cols=165  Identities=15%  Similarity=0.060  Sum_probs=113.9

Q ss_pred             EEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhH-----HHHHHHHHHHHHhhcCCCCC----------------
Q 015532           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE-----AAMIEIDVLQRLARHDIGGT----------------  153 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~-----~~~~E~~il~~l~~~~~~~~----------------  153 (405)
                      .+...|++|+||+||++..  .+..++.+.+........     .+.+|+++|++|.|+.....                
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G   82 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAG   82 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecC
Confidence            3567899999999998775  567788777765443222     57789999999976432111                


Q ss_pred             --ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCC-CCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceec
Q 015532          154 --RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI  230 (405)
Q Consensus       154 --~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDl-kp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~  230 (405)
                        +....+. ....++.|++.+|.++|++||+|||| ||+|||++.+|.                           ++|+
T Consensus        83 ~~L~~~~~~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~---------------------------i~LI  134 (218)
T PRK12274         83 AAMYQRPPR-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGS---------------------------PAVI  134 (218)
T ss_pred             ccHHhhhhh-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCC---------------------------EEEE
Confidence              1111111 22457889999999999999999999 799999976664                           4555


Q ss_pred             cCCCCccccCCcc----------------ceecCCCcchhHHHhCC-CCC-CchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          231 DFGSTTFEHQDHS----------------YVVSTRHYRAPEVILGL-GWN-YPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       231 Dfg~a~~~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~-~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                      |||++........                ....++.|++|+...-. ..+ ...++++.|+-+|.++|+..++.++.
T Consensus       135 DFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        135 DFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             ECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            5555543222110                02357889999865433 233 55678899999999999998876543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.76  E-value=4.8e-18  Score=148.73  Aligned_cols=100  Identities=22%  Similarity=0.184  Sum_probs=78.6

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhh---------------------------hhHHHHHHHHHHHHHhhcC
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------------------------YREAAMIEIDVLQRLARHD  149 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------------------------~~~~~~~E~~il~~l~~~~  149 (405)
                      .+.||+|+||.||+|++. +|+.||||+++....                           .......|...+.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999987 899999999864311                           0122357889999998876


Q ss_pred             CCCC-------------------------ccccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEeccc
Q 015532          150 IGGT-------------------------RYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       150 ~~~~-------------------------~~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~  198 (405)
                      +...                         ....++...+..++.|++.+|.++|+ +||+||||||+|||++ ++
T Consensus        81 i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~  154 (190)
T cd05145          81 VPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG  154 (190)
T ss_pred             CCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence            5210                         01235667888999999999999999 9999999999999996 44

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=4.2e-18  Score=175.93  Aligned_cols=170  Identities=26%  Similarity=0.439  Sum_probs=125.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh--------h-------cC--C-C-
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA--------R-------HD--I-G-  151 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~--------~-------~~--~-~-  151 (405)
                      ...|.|.+.||+|+||+||+|.+.. |+.||||+-+....+.  +..=.+++.+|.        |       ++  + + 
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE--fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~  773 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE--FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS  773 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee--eeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence            4579999999999999999999976 9999999865432211  111111222221        1       00  0 0 


Q ss_pred             -----C------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          152 -----G------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       152 -----~------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                           +      .....+++..++.++.|++.-+++||.++|||+||||+|+||...-   ..|                
T Consensus       774 ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~---~~~----------------  834 (974)
T KOG1166|consen  774 EYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREI---CAD----------------  834 (974)
T ss_pred             eccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeeccc---CCC----------------
Confidence                 0      1235678899999999999999999999999999999999996431   111                


Q ss_pred             CCCCCCceeccCCCCccc---cCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCC
Q 015532          221 LPKSSAIKLIDFGSTTFE---HQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~---~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                       +.+.-++|+|||.+...   .+..  ...++|-.+-++|+..|.++++.+|.|.|+.+++.||.|+.
T Consensus       835 -~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  835 -SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             -CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence             12456899999988432   2221  23578899999999999999999999999999999999864

>smart00090 RIO RIO-like kinase

Probab=99.68  E-value=2e-16  Score=142.94  Aligned_cols=102  Identities=25%  Similarity=0.181  Sum_probs=79.3

Q ss_pred             eEEEeeeecccceeEEEEE-ecCCCcEEEEEEecchhh-------------------------hhHHHHHHHHHHHHHhh
Q 015532           94 YRILSKMGEGTFGQVVECF-DNEKKELVAIKIVRSINK-------------------------YREAAMIEIDVLQRLAR  147 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~-~~~~~~~vAiK~~~~~~~-------------------------~~~~~~~E~~il~~l~~  147 (405)
                      |.+.+.||+|+||.||+|. +..+|+.||||+++....                         ....+..|+.++.++.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            8899999999999999999 667899999999864311                         11234579999999986


Q ss_pred             cCCC------------------CC-------ccccCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCCCcEEEe
Q 015532          148 HDIG------------------GT-------RYRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPENILLV  195 (405)
Q Consensus       148 ~~~~------------------~~-------~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIli~  195 (405)
                      ..+.                  +.       ....+....+..++.||+.+|.+||++| |+||||||+||+++
T Consensus       110 ~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~  183 (237)
T smart00090      110 AGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH  183 (237)
T ss_pred             cCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence            4321                  00       0112344456789999999999999999 99999999999996

>PRK10345 hypothetical protein; Provisional

Probab=99.62  E-value=2.5e-15  Score=132.64  Aligned_cols=96  Identities=25%  Similarity=0.325  Sum_probs=70.7

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecch-hhhhHHHHHHHHHHHHHh-----hcCCCCCc------------c---
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLA-----RHDIGGTR------------Y---  155 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~-----~~~~~~~~------------~---  155 (405)
                      .+.||+|+||.||.  +..++.. +||++... ....+...+|+.+++.+.     |++|....            +   
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            46899999999995  6666665 69988643 224566889999999995     47663211            0   


Q ss_pred             -----------------ccCCHHHHHHHHHHHHHHH-HHHHHCCcEecCCCCCcEEEecc
Q 015532          156 -----------------RSFPIDLVRELGRQLLESV-AFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       156 -----------------~~l~~~~~~~~~~qi~~aL-~~LH~~givHrDlkp~NIli~~~  197 (405)
                                       ..+++.  ..++.|++.++ +|||+++|+||||||+|||++..
T Consensus        84 ~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~  141 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRI  141 (210)
T ss_pred             ecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEecc
Confidence                             012222  34578888888 99999999999999999999753

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.62  E-value=3.7e-16  Score=136.97  Aligned_cols=212  Identities=17%  Similarity=0.187  Sum_probs=147.6

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ..++-+|.+...|..|+|++.  |..+++|+++..+   .....|..|.-.|+-+.|||+...+                
T Consensus       192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m  269 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM  269 (448)
T ss_pred             hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence            456778999999999999986  3446678875322   2334577788888888998873221                


Q ss_pred             -----c--------ccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 -----Y--------RSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 -----~--------~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                           |        -.....++.+++.+|+.|+.|||+..  |..--|....++|+.+-+.                   
T Consensus       270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlta-------------------  330 (448)
T KOG0195|consen  270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTA-------------------  330 (448)
T ss_pred             cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhh-------------------
Confidence                 1        12345688999999999999999853  4444678888998765332                   


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCC---CchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                            .+.++|--++....    ...-.+.||+||.++..+-+   .++|+|||++++|||.|.+.||...++.+.-.+
T Consensus       331 ------rismad~kfsfqe~----gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk  400 (448)
T KOG0195|consen  331 ------RISMADTKFSFQEV----GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK  400 (448)
T ss_pred             ------heecccceeeeecc----ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh
Confidence                  23333422221111    11346789999999887543   679999999999999999999998877665443


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      |.-                      .|.+.                          ..+..++.....|+.-|+.-||.+
T Consensus       401 ial----------------------eglrv--------------------------~ippgis~hm~klm~icmnedpgk  432 (448)
T KOG0195|consen  401 IAL----------------------EGLRV--------------------------HIPPGISRHMNKLMNICMNEDPGK  432 (448)
T ss_pred             hhh----------------------ccccc--------------------------cCCCCccHHHHHHHHHHhcCCCCc
Confidence            311                      11111                          123455778889999999999999


Q ss_pred             CCCHHHHH
Q 015532          377 RLKAREAL  384 (405)
Q Consensus       377 Rpta~elL  384 (405)
                      ||..+.++
T Consensus       433 rpkfdmiv  440 (448)
T KOG0195|consen  433 RPKFDMIV  440 (448)
T ss_pred             CCCcceeh
Confidence            99887654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.62  E-value=2.6e-15  Score=132.34  Aligned_cols=104  Identities=24%  Similarity=0.216  Sum_probs=78.0

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-----------------------hhhHHHHHHHHHHHHHhhcCC
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------KYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----------------------~~~~~~~~E~~il~~l~~~~~  150 (405)
                      |.+.+.||+|+||.||+|... +|+.||||+++...                       ........|+.++..+.+.++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            888899999999999999874 78999999875321                       011235678999999977643


Q ss_pred             CC------------------CccccCCH-HHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          151 GG------------------TRYRSFPI-DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       151 ~~------------------~~~~~l~~-~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                      ..                  .....+.. .....++.+++.++.++|+.||+||||||+||+++.++
T Consensus        96 ~v~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~  162 (198)
T cd05144          96 PVPKPIDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE  162 (198)
T ss_pred             CCCceeecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence            10                  00011122 45667899999999999999999999999999997544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.56  E-value=1.5e-14  Score=126.16  Aligned_cols=100  Identities=29%  Similarity=0.300  Sum_probs=71.6

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhh---hH----------------------HHHHHHHHHHHHhhcCCC
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---RE----------------------AAMIEIDVLQRLARHDIG  151 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~----------------------~~~~E~~il~~l~~~~~~  151 (405)
                      .+.||+|+||+||+|.+. +++.||||+++.....   ..                      ....|...+..+.+..+.
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999986 7889999998642210   11                      113566677776655321


Q ss_pred             C-----------------------CccccCCH-HHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEeccc
Q 015532          152 G-----------------------TRYRSFPI-DLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       152 ~-----------------------~~~~~l~~-~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~  198 (405)
                      .                       ........ ..+..++.+++.++.++|. +||+||||||+||+++ ++
T Consensus        81 ~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~  151 (187)
T cd05119          81 VPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG  151 (187)
T ss_pred             CCceEecCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence            0                       00011111 5678899999999999999 9999999999999997 44

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=4.5e-16  Score=157.51  Aligned_cols=229  Identities=21%  Similarity=0.318  Sum_probs=160.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-CCcEEEEEEecchh---hhhHHHHHHHHHHHHHh-hcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~-~~~~~~~~------------  154 (405)
                      ..|.+.+.||+|+|+.|-.+.... ....+|+|.+....   ...+....|..+-+.+. |.++....            
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            347888889999999998887643 34567777764332   22233334666666666 66552211            


Q ss_pred             ----------------c-ccCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ----------------Y-RSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ----------------~-~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                      . ...+...+..++.|+..+|.|+| ..++.||||||+|.+++..+.                 
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~-----------------  162 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS-----------------  162 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC-----------------
Confidence                            1 13456678899999999999999 999999999999999877650                 


Q ss_pred             cccCCCCCCCceeccCCCCccccC-Cc-----cceec-CCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQ-DH-----SYVVS-TRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~-~~-----~~~~g-t~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                               .++++|||+|..... ..     ...+| ++.|+|||...+.. .....|+||+|+++..+++|..|+...
T Consensus       163 ---------~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~  233 (601)
T KOG0590|consen  163 ---------ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP  233 (601)
T ss_pred             ---------cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence                     355666665544333 11     12468 99999999998854 457899999999999999999998654


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ...+..                              ...|....               .......+...+....+++.+
T Consensus       234 ~~~~~~------------------------------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~k  268 (601)
T KOG0590|consen  234 SRKDGR------------------------------YSSWKSNK---------------GRFTQLPWNSISDQAHDLLHK  268 (601)
T ss_pred             cccccc------------------------------ceeecccc---------------cccccCccccCChhhhhcccc
Confidence            332200                              00011000               000112234556788899999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      +|..+|+.|.+.+++..++|+..
T Consensus       269 ~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  269 ILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccCCchhccccccccccccccc
Confidence            99999999999999999999998

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=1.8e-14  Score=140.00  Aligned_cols=232  Identities=22%  Similarity=0.289  Sum_probs=160.8

Q ss_pred             cCCCeEEEeeeec--ccceeEEEEEe--cCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCC-C----------
Q 015532           90 LTPRYRILSKMGE--GTFGQVVECFD--NEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDI-G----------  151 (405)
Q Consensus        90 ~~~~y~~~~~LG~--G~fg~V~~a~~--~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~-~----------  151 (405)
                      +..++.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+.-   ......-.+|+.-.+++..+.. .          
T Consensus       112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~  191 (524)
T KOG0601|consen  112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG  191 (524)
T ss_pred             hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence            4567888999999  99999999998  888999999973211   1111222334433333322211 0          


Q ss_pred             -----------------CCccccCCHHHHHHHHHHHHH----HHHHHHHCCcEecCCCCCcEEEecc-cccccCCccccc
Q 015532          152 -----------------GTRYRSFPIDLVRELGRQLLE----SVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKFLS  209 (405)
Q Consensus       152 -----------------~~~~~~l~~~~~~~~~~qi~~----aL~~LH~~givHrDlkp~NIli~~~-~~~k~~df~~~~  209 (405)
                                       ......++...++..+.+...    ||.++|+.+|+|-|+||+||++..+ ..++++||+++.
T Consensus       192 ~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  192 ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVS  271 (524)
T ss_pred             cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeE
Confidence                             011234678888999999999    9999999999999999999999988 888888888753


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-  288 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~-  288 (405)
                                        +|.|.+++...... ....|...|++||++.+ -++...||+|+|.++.+..++..++... 
T Consensus       272 ------------------~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~  331 (524)
T KOG0601|consen  272 ------------------KISDGNFSSVFKVS-KRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK  331 (524)
T ss_pred             ------------------EccCCccccceeee-ecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC
Confidence                              33444333322211 11246667999999876 6789999999999999999988776543 


Q ss_pred             -ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          289 -ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       289 -~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                       +....+.++.     +|                                              .+..+..+.++...+.
T Consensus       332 ~~~W~~~r~~~-----ip----------------------------------------------~e~~~~~s~~l~~~~~  360 (524)
T KOG0601|consen  332 NSSWSQLRQGY-----IP----------------------------------------------LEFCEGGSSSLRSVTS  360 (524)
T ss_pred             CCCcccccccc-----Cc----------------------------------------------hhhhcCcchhhhhHHH
Confidence             2222111100     11                                              1122233456667999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      .|++.+|-.|++++.+++|+++...
T Consensus       361 ~~~d~~~~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  361 QMLDEDPRLRLTAQILTALNVIHSK  385 (524)
T ss_pred             HhcCcchhhhhHHHHHhccccccch
Confidence            9999999999999999999999753

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.53  E-value=1.3e-13  Score=122.64  Aligned_cols=96  Identities=19%  Similarity=0.123  Sum_probs=72.0

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh---------hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +.||+|++|.||+|.+  .+..|+||+.....         .....+.+|+.++..+.++++....              
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            5799999999999987  56679999864311         1224567899999999887652211              


Q ss_pred             ---cccCCH------HHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe
Q 015532          155 ---YRSFPI------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  195 (405)
Q Consensus       155 ---~~~l~~------~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~  195 (405)
                         ...+..      .....++.+++.+|.++|+.|++|+|++|+|||++
T Consensus        80 ~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~  129 (211)
T PRK14879         80 YIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS  129 (211)
T ss_pred             EeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE
Confidence               001110      14568899999999999999999999999999996

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.51  E-value=2.3e-13  Score=119.97  Aligned_cols=95  Identities=19%  Similarity=0.135  Sum_probs=69.6

Q ss_pred             eeecccceeEEEEEecCCCcEEEEEEecchh---------hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .||+|+||.||+|..  ++..|++|+.....         ...+.+.+|++++..+.++++....               
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            489999999999985  46779999864211         1124566899999999887642110               


Q ss_pred             --cccCCHHHHH---HHHHHHHHHHHHHHHCCcEecCCCCCcEEEe
Q 015532          155 --YRSFPIDLVR---ELGRQLLESVAFMHELRLIHTDLKPENILLV  195 (405)
Q Consensus       155 --~~~l~~~~~~---~~~~qi~~aL~~LH~~givHrDlkp~NIli~  195 (405)
                        ...+......   .++.|++.+|.+||+.|++|+|++|+||+++
T Consensus        79 ~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~  124 (199)
T TIGR03724        79 IEGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR  124 (199)
T ss_pred             ECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE
Confidence              1111111111   7899999999999999999999999999996

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.45  E-value=3.2e-13  Score=136.87  Aligned_cols=110  Identities=19%  Similarity=0.132  Sum_probs=77.7

Q ss_pred             EeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEe-cch--------hhhhHHHHHHHHHHHHHhhcCCCCCc
Q 015532           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSI--------NKYREAAMIEIDVLQRLARHDIGGTR  154 (405)
Q Consensus        84 ~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~-~~~--------~~~~~~~~~E~~il~~l~~~~~~~~~  154 (405)
                      ....+.....|...+.||+|+||+||++.+....  +++|+. .+.        ....+.+.+|+++++.+.++++....
T Consensus       325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~  402 (535)
T PRK09605        325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV  402 (535)
T ss_pred             eccccccccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence            3334444566778899999999999999875443  444432 110        01235577899999999998764311


Q ss_pred             -----------------cccCCHH--HHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe
Q 015532          155 -----------------YRSFPID--LVRELGRQLLESVAFMHELRLIHTDLKPENILLV  195 (405)
Q Consensus       155 -----------------~~~l~~~--~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~  195 (405)
                                       ...+...  ....++.|++.+|.+||++||+||||||+|||++
T Consensus       403 ~~~~~~~~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~  462 (535)
T PRK09605        403 IYDVDPEEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR  462 (535)
T ss_pred             EEEEeCCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE
Confidence                             1112221  2567889999999999999999999999999993

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.39  E-value=1.4e-13  Score=140.63  Aligned_cols=256  Identities=21%  Similarity=0.263  Sum_probs=169.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHH----HHHHHHHHHHHhhcCCCC---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHDIGG---------------  152 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~----~~~E~~il~~l~~~~~~~---------------  152 (405)
                      +.+.+.+-+-+|.++.++.+.-..++...++|+.....+....    ...+-+++-...++....               
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~  883 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG  883 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence            4577888999999999999988888877777766543332211    111222222111111110               


Q ss_pred             C------c------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC-CCCccc
Q 015532          153 T------R------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK-DGSYFK  219 (405)
Q Consensus       153 ~------~------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~-~~~~~~  219 (405)
                      .      +      .+..+.+-++.++..+..+++|||...+.|||++|.|+++...|+.+++||+....... +.....
T Consensus       884 ~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~  963 (1205)
T KOG0606|consen  884 HYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDL  963 (1205)
T ss_pred             HHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCc
Confidence            0      0      01234556667788899999999999999999999999999999999999985443221 111000


Q ss_pred             CCCCCCCceeccCCCCccc---cC----CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFE---HQ----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~---~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                      . .....+..-+++.....   ..    .....+||+.|.+||.+.+......+|+|++|+++++.++|.+||......+
T Consensus       964 s-g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~ 1042 (1205)
T KOG0606|consen  964 S-GPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ 1042 (1205)
T ss_pred             c-cccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh
Confidence            0 00001111122211110   00    1122579999999999999999999999999999999999999998877766


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..|...                        ...|+..                       ....+..+++++...|..
T Consensus      1043 ~f~ni~~~------------------------~~~~p~g-----------------------~~~~s~~aq~~~~~ll~~ 1075 (1205)
T KOG0606|consen 1043 IFENILNR------------------------DIPWPEG-----------------------PEEGSYEAQDLINRLLTE 1075 (1205)
T ss_pred             hhhccccC------------------------CCCCCCC-----------------------ccccChhhhhhhhhhhcc
Confidence            55443221                        2334331                       234466889999999999


Q ss_pred             CCCCCCCHH---HHHcCCCCCCCCCC
Q 015532          373 DPAERLKAR---EALRHPFFTRDVRR  395 (405)
Q Consensus       373 dP~~Rpta~---elL~hp~f~~~~~~  395 (405)
                      +|.+|..+.   ++-.|+||+...+.
T Consensus      1076 ~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1076 EPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred             CchhccCcccccccccCCccCCCCcc
Confidence            999999887   88899999987543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.38  E-value=1.2e-12  Score=127.30  Aligned_cols=159  Identities=21%  Similarity=0.307  Sum_probs=106.4

Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCc-EecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCC
Q 015532          157 SFPIDLVRELGRQLLESVAFMHELRL-IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  235 (405)
Q Consensus       157 ~l~~~~~~~~~~qi~~aL~~LH~~gi-vHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  235 (405)
                      .+++.....++++|+.||.|||...| .|+.++..|++++..                           +.+||.|||+.
T Consensus        44 ~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~---------------------------w~lklt~~Gl~   96 (484)
T KOG1023|consen   44 KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSR---------------------------WVLKLTDFGLN   96 (484)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeee---------------------------EEEEechhhhc
Confidence            45566677889999999999997655 999999999999764                           45666666665


Q ss_pred             ccccC-----CccceecCCCcchhHHHhCCC-------CCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHH
Q 015532          236 TFEHQ-----DHSYVVSTRHYRAPEVILGLG-------WNYPCDLWSVGCILVELCSGEALFQTHEN----LEHLAMMER  299 (405)
Q Consensus       236 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~~DiwSlG~il~~lltg~~pf~~~~~----~~~~~~i~~  299 (405)
                      .....     ......-..-|.|||.+.+..       .+.+.||||+|++++|+++...||.....    .+.+..+..
T Consensus        97 ~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~  176 (484)
T KOG1023|consen   97 SLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK  176 (484)
T ss_pred             ccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence            44421     111112334689999998742       35679999999999999999999975322    222222222


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                       .+..+.                                        .|....  .....+++..++.+|+..+|++||+
T Consensus       177 -~~~~~~----------------------------------------rP~i~~--~~e~~~~l~~l~~~cw~e~P~~rPs  213 (484)
T KOG1023|consen  177 -GGSNPF----------------------------------------RPSIEL--LNELPPELLLLVARCWEEIPEKRPS  213 (484)
T ss_pred             -cCCCCc----------------------------------------Ccchhh--hhhcchHHHHHHHHhcccChhhCcc
Confidence             010000                                        000000  0122347889999999999999999


Q ss_pred             HHHHHc
Q 015532          380 AREALR  385 (405)
Q Consensus       380 a~elL~  385 (405)
                      ++++-.
T Consensus       214 ~~~i~~  219 (484)
T KOG1023|consen  214 IEQIRS  219 (484)
T ss_pred             HHHHHh
Confidence            988753

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.32  E-value=1.1e-11  Score=112.27  Aligned_cols=112  Identities=21%  Similarity=0.175  Sum_probs=77.9

Q ss_pred             eeee-cccceeEEEEEecCCCcEEEEEEecchh--------------hhhHHHHHHHHHHHHHhhcCCCC----------
Q 015532           98 SKMG-EGTFGQVVECFDNEKKELVAIKIVRSIN--------------KYREAAMIEIDVLQRLARHDIGG----------  152 (405)
Q Consensus        98 ~~LG-~G~fg~V~~a~~~~~~~~vAiK~~~~~~--------------~~~~~~~~E~~il~~l~~~~~~~----------  152 (405)
                      ..|| .|+.|+||.+...  +..++||.++...              .....+.+|++++..|.+.++..          
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            4677 7888889888764  6678999874311              12345678999999999876410          


Q ss_pred             --Ccc----------ccCCHHH-------HHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          153 --TRY----------RSFPIDL-------VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       153 --~~~----------~~l~~~~-------~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                        ..+          +.-+...       ....+.||+.+|.+||++||+||||||+|||++.++               
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~---------------  179 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDG---------------  179 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC---------------
Confidence              000          0001111       123467899999999999999999999999996533               


Q ss_pred             CCCcccCCCCCCCceeccCCCCccc
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFE  238 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~  238 (405)
                                  .++|+|||.+...
T Consensus       180 ------------~v~LIDfg~~~~~  192 (239)
T PRK01723        180 ------------KFWLIDFDRGELR  192 (239)
T ss_pred             ------------CEEEEECCCcccC
Confidence                        5788888877653

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.31  E-value=1.6e-11  Score=102.45  Aligned_cols=100  Identities=27%  Similarity=0.300  Sum_probs=76.4

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc--CCCCC---------c----------
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--DIGGT---------R----------  154 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~--~~~~~---------~----------  154 (405)
                      +++.||+|.++.||++....  ..++||+...... ...+..|+.+++.+.+.  .+...         .          
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            45789999999999999854  6799999865433 45688899999999885  22110         0          


Q ss_pred             -cccCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCCCcEEEeccc
Q 015532          155 -YRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 -~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIli~~~~  198 (405)
                       ...++......++.+++.+|.++|..   +++|+|++|+||+++..+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~  126 (155)
T cd05120          79 TLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK  126 (155)
T ss_pred             ecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc
Confidence             01113366778899999999999984   799999999999997544

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.20  E-value=1.4e-11  Score=121.63  Aligned_cols=236  Identities=19%  Similarity=0.224  Sum_probs=145.2

Q ss_pred             CCccCCCeEEEeeeecccc---eeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCccccCCHHHH
Q 015532           87 GENLTPRYRILSKMGEGTF---GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLV  163 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~f---g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~~~~l~~~~~  163 (405)
                      +....++|++.+.+|..+-   +.+|.++....+.....|-. .....+    ....-++++.|-.-     -...-+..
T Consensus        32 ~~~~~~~~~~~~~~~~~g~g~~~~ly~~~~~~sk~~~~~~s~-~~~~ld----~~~~~~~~lr~~~~-----vs~aTe~~  101 (700)
T KOG2137|consen   32 GPKESQSYRSLNQVGSAGPGDAWKLYAGKKSGSKAPTLKKSA-VVWMLD----KRASSLQQLRGLDG-----VSKATEDG  101 (700)
T ss_pred             CcccccccccccceeecCCCchhhhhhhhccCccCcccccee-eeeecC----hhhhHHHHHhcccc-----hhhcccHh
Confidence            3344567888887776554   45666665555443311111 000001    11223344444111     01111222


Q ss_pred             HHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc
Q 015532          164 RELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH  242 (405)
Q Consensus       164 ~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~  242 (405)
                      ..=+.+++.||.|+|. .++||+.|.|++|.++..|.+|++.|+++.....+.        +.....-|+++....    
T Consensus       102 f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~--------~~p~~~yd~~lp~~~----  169 (700)
T KOG2137|consen  102 FANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPT--------EYPFSEYDPPLPLLL----  169 (700)
T ss_pred             hhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCC--------ccccccCCCCCChhh----
Confidence            2233456699999994 699999999999999999999999998765443221        122333444433222    


Q ss_pred             cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhh
Q 015532          243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR  321 (405)
Q Consensus       243 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~ll-tg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~  321 (405)
                         .-...|.|||++.+...+.++|++|+||++|.+. .|+..+.......... .....+.                  
T Consensus       170 ---~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~------------------  227 (700)
T KOG2137|consen  170 ---QPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLN------------------  227 (700)
T ss_pred             ---ccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhcccc------------------
Confidence               2345799999999988889999999999999998 5666665443221111 1000000                  


Q ss_pred             cCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          322 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                                                 .........++.++++=|.++|..|+..||++.+++..|||++..
T Consensus       228 ---------------------------~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  228 ---------------------------AGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             ---------------------------cccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence                                       000111245677899999999999999999999999999999864

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.08  E-value=5.5e-10  Score=95.56  Aligned_cols=97  Identities=18%  Similarity=0.070  Sum_probs=70.4

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------cccCC-
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------YRSFP-  159 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------~~~l~-  159 (405)
                      ++.|+.|.++.||+++..  ++.|++|+.............|+.+++.+.+..+....                ...+. 
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLT   80 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccc
Confidence            467899999999999864  67799998755432233467899999998775542111                01111 


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHCCc-----EecCCCCCcEEEe
Q 015532          160 -IDLVRELGRQLLESVAFMHELRL-----IHTDLKPENILLV  195 (405)
Q Consensus       160 -~~~~~~~~~qi~~aL~~LH~~gi-----vHrDlkp~NIli~  195 (405)
                       ......++.+++.+|..||+.++     +|+|++|.||+++
T Consensus        81 ~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          81 EDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             ccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence             11234567899999999999885     9999999999996

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.08  E-value=2e-10  Score=111.98  Aligned_cols=223  Identities=22%  Similarity=0.201  Sum_probs=144.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEec-CCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhh-cCCCCCc----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLAR-HDIGGTR----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~-~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~-~~~~~~~----------  154 (405)
                      ...+|..+..||.|.|+.|+.+... .++..|++|.+.+.-   ......+.|+.+...+.. .+..+..          
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence            4567899999999999999998765 677889999775321   122223345555544433 2222210          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+.+...+.+..|++.++.++|+..++|+|+||+||++..+|                   
T Consensus       343 ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~-------------------  403 (524)
T KOG0601|consen  343 IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG-------------------  403 (524)
T ss_pred             CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch-------------------
Confidence                             11245567788899999999999999999999999999997752                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCCcccee-cCCCc-chhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVV-STRHY-RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-gt~~y-~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                             ...++.|||......-...... ++..| .+++......+..+.|++|||..+.+.+++...-........  
T Consensus       404 -------~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~--  474 (524)
T KOG0601|consen  404 -------FFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLT--  474 (524)
T ss_pred             -------hhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCccccccee--
Confidence                   1235555555542111111122 23334 355555556788999999999999999998765432221110  


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                       +.+  |.                                                .........++..+...|+..|+.
T Consensus       475 -i~~--~~------------------------------------------------~p~~~~~~~~~q~~~kv~~~~~~~  503 (524)
T KOG0601|consen  475 -IRS--GD------------------------------------------------TPNLPGLKLQLQVLLKVMINPDRK  503 (524)
T ss_pred             -eec--cc------------------------------------------------ccCCCchHHhhhhhhhhhcCCccc
Confidence             000  00                                                000112235778899999999999


Q ss_pred             CCCCHHHHHcCCCCCC
Q 015532          376 ERLKAREALRHPFFTR  391 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~  391 (405)
                      .|+.+.++..|.=|-.
T Consensus       504 ~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  504 RRPSAVELSLHSEFYR  519 (524)
T ss_pred             cchhhhhhcccchhhh
Confidence            9999999998876654

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.06  E-value=1.6e-09  Score=94.20  Aligned_cols=98  Identities=21%  Similarity=0.261  Sum_probs=70.8

Q ss_pred             eeeecccceeEEEEEecC------CCcEEEEEEecch-----------------------hhhhHH----HHHHHHHHHH
Q 015532           98 SKMGEGTFGQVVECFDNE------KKELVAIKIVRSI-----------------------NKYREA----AMIEIDVLQR  144 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~------~~~~vAiK~~~~~-----------------------~~~~~~----~~~E~~il~~  144 (405)
                      ..||.|-=+.||.|....      .+..+|||+.+..                       ...+..    ..+|+..|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            578999999999998653      3578999987420                       011222    2379999999


Q ss_pred             HhhcCCC-----------------CC------c--cccCCHHHHHHHHHHHHHHHHHH-HHCCcEecCCCCCcEEEe
Q 015532          145 LARHDIG-----------------GT------R--YRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLKPENILLV  195 (405)
Q Consensus       145 l~~~~~~-----------------~~------~--~~~l~~~~~~~~~~qi~~aL~~L-H~~givHrDlkp~NIli~  195 (405)
                      +....+.                 +.      .  ...+++.....+..|++.+|..| |+.||||+||++.|||+.
T Consensus        83 l~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~  159 (197)
T cd05146          83 MQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH  159 (197)
T ss_pred             HHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE
Confidence            8876431                 10      0  01234456677889999999998 899999999999999995

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.99  E-value=2.2e-09  Score=105.67  Aligned_cols=37  Identities=22%  Similarity=0.378  Sum_probs=28.9

Q ss_pred             HHHHHHHHH-HHHHHHHCCcEecCCCCCcEEEeccccc
Q 015532          164 RELGRQLLE-SVAFMHELRLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       164 ~~~~~qi~~-aL~~LH~~givHrDlkp~NIli~~~~~~  200 (405)
                      ..++.+++. .+..+|..|++|+|+||.||++..+|.+
T Consensus       259 ~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i  296 (437)
T TIGR01982       259 KALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKI  296 (437)
T ss_pred             HHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcE
Confidence            345666665 4788999999999999999999765543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.93  E-value=2e-09  Score=107.49  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=30.0

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecc
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS  127 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~  127 (405)
                      .|.. +.||+|++|.||+|+.+.+|+.||||+++.
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP  154 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRP  154 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence            4665 789999999999999988899999999863

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.88  E-value=1e-08  Score=101.42  Aligned_cols=160  Identities=18%  Similarity=0.278  Sum_probs=108.8

Q ss_pred             eEEEeeeecccceeEE-EEEecCCCcEEEEEEecchhh-hhHHHHHHHHHHHHHhhcCCCCCcc----------------
Q 015532           94 YRILSKMGEGTFGQVV-ECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRY----------------  155 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~-~a~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~il~~l~~~~~~~~~~----------------  155 (405)
                      |.+ ....-++.+ +| .|..+.++.+|.|...+.... ..+...+-++-|+.|+||+|...+.                
T Consensus        15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~   92 (690)
T KOG1243|consen   15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR   92 (690)
T ss_pred             ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc
Confidence            444 334444444 34 466677888899998865443 3345667889999999999955431                


Q ss_pred             ------ccCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          156 ------RSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       156 ------~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                            ..+....+..-+.||+.||.||| +++++|++|.-+.|+++..|.+||.+|.++....                
T Consensus        93 Pl~~~lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~----------------  156 (690)
T KOG1243|consen   93 PLETVLKELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS----------------  156 (690)
T ss_pred             cHHHHHHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc----------------
Confidence                  12334556667899999999998 6799999999999999999999888887643221                


Q ss_pred             eccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       229 l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                        +|+-      ......--..|..|+.+....  ...|.|-|||++++++.|
T Consensus       157 --~~~~------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  157 --GFNA------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             --cCCc------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence              1111      000111122356676554333  457999999999999999

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=4.2e-09  Score=95.56  Aligned_cols=164  Identities=18%  Similarity=0.206  Sum_probs=103.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHC--CcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCC
Q 015532          158 FPIDLVRELGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  235 (405)
Q Consensus       158 l~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  235 (405)
                      +.....++++.||+.||.|||+.  -|+|+++..+-|++..+|.+|+.--....             -...++.++    
T Consensus       173 ~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s-------------~h~s~~~~~----  235 (458)
T KOG1266|consen  173 LFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-------------THPSVNSTR----  235 (458)
T ss_pred             hhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccc-------------cchhhhhhh----
Confidence            45566778999999999999987  59999999999999887765542110000             000000000    


Q ss_pred             ccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCChHHHHHhhH
Q 015532          236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL-FQTHENLEHLAMMERVLGPLPHHMVIRADR  314 (405)
Q Consensus       236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~p-f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~  314 (405)
                         ......-.+-++|.|||.-.....+.++|||++|....+|..+..- -.+.+....-..+....-.+          
T Consensus       236 ---~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l----------  302 (458)
T KOG1266|consen  236 ---EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL----------  302 (458)
T ss_pred             ---HhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec----------
Confidence               0011112466789999876555677899999999999999877643 21211111111111110000          


Q ss_pred             hhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          315 RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                                                                 ...--++++.+||+-.|..||+|.++|.||-+-.-+.
T Consensus       303 -------------------------------------------en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVhs  339 (458)
T KOG1266|consen  303 -------------------------------------------ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVHS  339 (458)
T ss_pred             -------------------------------------------cCccccCcCcccccCCCCCCcchhhhhcCceeeecch
Confidence                                                       0011247899999999999999999999998766543

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.74  E-value=1.6e-07  Score=88.31  Aligned_cols=109  Identities=18%  Similarity=0.302  Sum_probs=83.9

Q ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCC
Q 015532          155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS  234 (405)
Q Consensus       155 ~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  234 (405)
                      +..+.|....+.++.|+.+..-||.+|.+-+|+.++|+|+++++.+.+.|-.                   ...|++-|.
T Consensus       111 ~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsD-------------------sfqi~~ng~  171 (637)
T COG4248         111 YPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSD-------------------SFQINANGT  171 (637)
T ss_pred             CCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccc-------------------ceeeccCCc
Confidence            4567789999999999999999999999999999999999988776665521                   122222221


Q ss_pred             CccccCCccceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhC-CCCCCCC
Q 015532          235 TTFEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG-EALFQTH  288 (405)
Q Consensus       235 a~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg-~~pf~~~  288 (405)
                      -      ....+|...|.+||.-.     +..-+...|.|.||+++|+++.| ++||.+.
T Consensus       172 ~------~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         172 L------HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             e------EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            1      11237888999999764     33456789999999999999986 9999874

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.61  E-value=4e-07  Score=76.71  Aligned_cols=117  Identities=25%  Similarity=0.222  Sum_probs=83.2

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEec-c--------hhhhhHHHHHHHHHHHHHhhcCCCCC-----------c-
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVR-S--------INKYREAAMIEIDVLQRLARHDIGGT-----------R-  154 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~-~--------~~~~~~~~~~E~~il~~l~~~~~~~~-----------~-  154 (405)
                      .+..|-+|+-+.|+++.+.  |+.+.||.-- +        ..-.+....+|+.+|.++..-.|..-           . 
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            5678999999999999874  7777788421 1        11234556789999998876544110           0 


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...........++++|-..+.-||.++|||+||..+||++.++|                  
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~------------------  150 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG------------------  150 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC------------------
Confidence                              01111222367888999999999999999999999999998765                  


Q ss_pred             cccCCCCCCCceeccCCCCccc
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFE  238 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~  238 (405)
                            ....+.++|||++...
T Consensus       151 ------~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  151 ------NQITPILIDFGLSSVS  166 (229)
T ss_pred             ------CcCceEEEeecchhcc
Confidence                  3445689999987543

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=4.3e-07  Score=76.78  Aligned_cols=112  Identities=21%  Similarity=0.194  Sum_probs=74.9

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEe-cc--------hhhhhHHHHHHHHHHHHHhhcCCCCCc------------cc
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIV-RS--------INKYREAAMIEIDVLQRLARHDIGGTR------------YR  156 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~-~~--------~~~~~~~~~~E~~il~~l~~~~~~~~~------------~~  156 (405)
                      ..+++|+=+.+|.+...  |..+.+|.= .+        ..-..+...+|..++.++..-.+..-.            ..
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            35789999999998653  444666642 11        112345667899999998775442110            00


Q ss_pred             cCCHHH--------HHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          157 SFPIDL--------VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       157 ~l~~~~--------~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                      .+.-..        ...++..+-.-+.-||..||||+||.++||++...                            .+.
T Consensus        80 ~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~----------------------------~i~  131 (204)
T COG3642          80 YIEGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG----------------------------RIY  131 (204)
T ss_pred             EeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC----------------------------cEE
Confidence            111111        23467777788889999999999999999998653                            378


Q ss_pred             eccCCCCcccc
Q 015532          229 LIDFGSTTFEH  239 (405)
Q Consensus       229 l~Dfg~a~~~~  239 (405)
                      ++|||++....
T Consensus       132 ~IDfGLg~~s~  142 (204)
T COG3642         132 FIDFGLGEFSD  142 (204)
T ss_pred             EEECCcccccc
Confidence            89999886543

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.46  E-value=8e-07  Score=76.98  Aligned_cols=90  Identities=30%  Similarity=0.360  Sum_probs=59.0

Q ss_pred             eEEEEEecCCCcEEEEEEecch---------------------------hhhhHHHHHHHHHHHHHhhcCCC--------
Q 015532          107 QVVECFDNEKKELVAIKIVRSI---------------------------NKYREAAMIEIDVLQRLARHDIG--------  151 (405)
Q Consensus       107 ~V~~a~~~~~~~~vAiK~~~~~---------------------------~~~~~~~~~E~~il~~l~~~~~~--------  151 (405)
                      .||.|.. ..++.+|||+.+..                           ........+|.+.|.++....+.        
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            3899987 45778999987421                           01234456799999998776431        


Q ss_pred             ------------CCcccc-----CCHHHHHHHHHHHHHHHHH-HHHCCcEecCCCCCcEEEecc
Q 015532          152 ------------GTRYRS-----FPIDLVRELGRQLLESVAF-MHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       152 ------------~~~~~~-----l~~~~~~~~~~qi~~aL~~-LH~~givHrDlkp~NIli~~~  197 (405)
                                  +.....     ++......++.+++..+.. +|..||+|+||.+.|||++.+
T Consensus        80 ~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~  143 (188)
T PF01163_consen   80 RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG  143 (188)
T ss_dssp             TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT
T ss_pred             CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc
Confidence                        111111     1134567788888886655 579999999999999999753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.40  E-value=2.1e-06  Score=76.58  Aligned_cols=81  Identities=16%  Similarity=0.132  Sum_probs=56.9

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCC--C-------C-----Cc-------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDI--G-------G-----TR-------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~--~-------~-----~~-------  154 (405)
                      +.|+.|.++.||++.... |+.+++|+......  .......|+++++.+.+..+  .       .     ..       
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            578999999999998743 57899999765332  34567889999999876432  0       0     00       


Q ss_pred             -----c-----ccCCHHHHHHHHHHHHHHHHHHHH
Q 015532          155 -----Y-----RSFPIDLVRELGRQLLESVAFMHE  179 (405)
Q Consensus       155 -----~-----~~l~~~~~~~~~~qi~~aL~~LH~  179 (405)
                           .     ..+++.....++.+++.+|..||+
T Consensus        83 ~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          83 DGRVLRDRLLRPELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             CCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence                 0     124556677788888888888883

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.23  E-value=9.6e-06  Score=72.81  Aligned_cols=108  Identities=29%  Similarity=0.288  Sum_probs=77.5

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecc----------h-------------hhhhHHHHHHHHHHHHHhhcCC
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----------I-------------NKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~----------~-------------~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      +.+...||-|-=|.||.|.+. .|..+|||.=+.          .             .-.+..+.+|.++|++|.....
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            567789999999999999985 677899996421          0             1124556789999999976521


Q ss_pred             --C----------------CCccccC--CHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccccc
Q 015532          151 --G----------------GTRYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       151 --~----------------~~~~~~l--~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~  202 (405)
                        .                +.....+  ..+....++..|+.-+.-+-..||||+|+.+=||+++.+|.+.+
T Consensus       172 ~VP~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~v  243 (304)
T COG0478         172 KVPKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVV  243 (304)
T ss_pred             CCCCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEE
Confidence              0                1111122  35666777778887777777999999999999999987664333

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.19  E-value=4.7e-05  Score=73.85  Aligned_cols=138  Identities=16%  Similarity=0.190  Sum_probs=95.8

Q ss_pred             ceeEEEEEecCCCcEEEEEEecchhh-hhHHHHHHHHHHHHHhhcCCCCCc-----------------------------
Q 015532          105 FGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTR-----------------------------  154 (405)
Q Consensus       105 fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~il~~l~~~~~~~~~-----------------------------  154 (405)
                      -.+.|+|....+|..|++|++.-.+. .......-++.++++.|.|++...                             
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            35779999999999999999832111 111122346788888888863211                             


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ....+|..+|.++.||..||.++|+.|..-+-|.+.+||++.+.                  
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~------------------  430 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKM------------------  430 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcc------------------
Confidence                              13457899999999999999999999999999999999986432                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCC
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                               +++|+..|.......+..           |.+.+   -.+-|.=.||.+++.|.||..
T Consensus       431 ---------RIriS~C~i~Dvl~~d~~-----------~~le~---~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  431 ---------RIRISGCGIMDVLQEDPT-----------EPLES---QQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             ---------eEEEecccceeeecCCCC-----------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence                     456655555443332220           11111   135688899999999999853

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.14  E-value=2.2e-05  Score=72.14  Aligned_cols=56  Identities=21%  Similarity=0.134  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCc
Q 015532          161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT  236 (405)
Q Consensus       161 ~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  236 (405)
                      .....++.+++..+.-||..||+|+|+++.|||++.+...                    -.....+.++||+.+.
T Consensus       138 ~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~--------------------~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        138 RLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPG--------------------REEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccC--------------------CCCCceEEEEECCccc
Confidence            4566788999999999999999999999999999741000                    0123468899998764

>PRK09902 hypothetical protein; Provisional

Probab=98.04  E-value=4.5e-05  Score=66.74  Aligned_cols=96  Identities=13%  Similarity=0.080  Sum_probs=69.4

Q ss_pred             ecccceeEEEEEecCCCcEEEEEEecc----h---hhhhHHHHHHHHHHHHHhhcCCCCC--------------------
Q 015532          101 GEGTFGQVVECFDNEKKELVAIKIVRS----I---NKYREAAMIEIDVLQRLARHDIGGT--------------------  153 (405)
Q Consensus       101 G~G~fg~V~~a~~~~~~~~vAiK~~~~----~---~~~~~~~~~E~~il~~l~~~~~~~~--------------------  153 (405)
                      |+||.+-|+.....  |+.+-+|.-..    .   ......+.+|+..|+.|....+...                    
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            56888888887654  33577886531    0   2245778999999999988665110                    


Q ss_pred             --c--------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          154 --R--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       154 --~--------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                        .              ....+......++.+++..+.-||+.|+.|+|+-+.||+++..|
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g  165 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG  165 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC
Confidence              0              01123445568999999999999999999999999999997543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.96  E-value=2.7e-06  Score=84.21  Aligned_cols=218  Identities=16%  Similarity=0.053  Sum_probs=146.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC-CCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~-~~~~----------------  154 (405)
                      ..|....-+++|+++++++.+...+...+ .+++...    .....++++|.+++|++. ....                
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~  316 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRIC  316 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhh
Confidence            34666788999999999999987776655 7776543    334568999999999983 1111                


Q ss_pred             --c-----------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 --Y-----------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 --~-----------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                        .           -.+.+.+...+.+.-.++|+++|+..=+|+|    ||+..+                         
T Consensus       317 s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-------------------------  367 (829)
T KOG0576|consen  317 STGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-------------------------  367 (829)
T ss_pred             cCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-------------------------
Confidence              0           0122234445666777889999988778998    887543                         


Q ss_pred             CCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                         ...+..||+........  ..+..+|+.++|||+..+..+....|.|++|.-..++.-|.+|-..-           
T Consensus       368 ---~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P-----------  433 (829)
T KOG0576|consen  368 ---EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSP-----------  433 (829)
T ss_pred             ---cccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCC-----------
Confidence               34677888877665554  45578999999999999999999999999998777887787776430           


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH-HHHHHHccccCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERL  378 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ll~~~L~~dP~~Rp  378 (405)
                           |..                 ......+..+.....+               ...+..+ .++...|+..-|..|+
T Consensus       434 -----~~~-----------------~~~~g~~p~s~~L~~~---------------~aw~~~~~~~~~~~~~~g~P~~pk  476 (829)
T KOG0576|consen  434 -----PAV-----------------LPMIGNGPNSPMLTDK---------------SAWSPVFHRDFPAPCLNGLPPTPK  476 (829)
T ss_pred             -----ccc-----------------cCCCCCCCCccccchh---------------hhcCcccccCCcccccCCCCCCCc
Confidence                 000                 0000000000000000               0001111 2577899999999999


Q ss_pred             CHHHHHcCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 ta~elL~hp~f~~~~~  394 (405)
                      ++..++.|.+|.+..-
T Consensus       477 v~mgacfsKvfngCpl  492 (829)
T KOG0576|consen  477 VHMGACFSKVFNGCPL  492 (829)
T ss_pred             chhhHHHHHHhccCcc
Confidence            9999999999988753

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.94  E-value=0.0002  Score=63.72  Aligned_cols=97  Identities=22%  Similarity=0.211  Sum_probs=66.6

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhh-------------------------hhHHHHHHHHHHHHHhhcCCC-
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------------------------YREAAMIEIDVLQRLARHDIG-  151 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------------------------~~~~~~~E~~il~~l~~~~~~-  151 (405)
                      ..|.+|--+.||+|.. .++..||||+++....                         ...-...|...|+++....+- 
T Consensus        54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv  132 (268)
T COG1718          54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV  132 (268)
T ss_pred             eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            3566677778999986 5678999999853110                         011223578888887664330 


Q ss_pred             ----------------CC---ccc-----cCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEe
Q 015532          152 ----------------GT---RYR-----SFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV  195 (405)
Q Consensus       152 ----------------~~---~~~-----~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~  195 (405)
                                      +.   ...     .+..+++..+..+++..+.-|-. .|+||+||..=|||+.
T Consensus       133 P~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~  201 (268)
T COG1718         133 PEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH  201 (268)
T ss_pred             CCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence                            10   111     22334688888999999988876 9999999999999997

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.83  E-value=0.0003  Score=61.91  Aligned_cols=107  Identities=16%  Similarity=0.164  Sum_probs=67.9

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhH----------HHHHHHHHHHHHhhcCCCCCc-----
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----------AAMIEIDVLQRLARHDIGGTR-----  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~----------~~~~E~~il~~l~~~~~~~~~-----  154 (405)
                      +.+.|.+.+.+-......|.+..-  .|+.+.+|..+......+          ...+++..+.++....+....     
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            467899999999998888877764  467789998764332222          223344545555443221100     


Q ss_pred             --------------------cccCCHH-HH-HHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 --------------------YRSFPID-LV-RELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 --------------------~~~l~~~-~~-~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                          ...+.+- .+ -.+...|..++.-||+.|+.|+|.+|.|+++..++
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~  172 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG  172 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchhcCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc
Confidence                                0111110 01 13456778889999999999999999999987543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.77  E-value=4.6e-05  Score=75.96  Aligned_cols=28  Identities=25%  Similarity=0.316  Sum_probs=24.9

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEec
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVR  126 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~  126 (405)
                      ..|+.++-|.||+|+.+ +|+.||||+.+
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqr  158 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVKVQR  158 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEEecC
Confidence            57999999999999986 48999999975

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.77  E-value=0.00039  Score=60.47  Aligned_cols=100  Identities=22%  Similarity=0.305  Sum_probs=69.5

Q ss_pred             CCeEEEeeeecccc-eeEEEEEecCCCcEEEEEEecc------------hh----------hhhHHHHHHHHHHHHHhhc
Q 015532           92 PRYRILSKMGEGTF-GQVVECFDNEKKELVAIKIVRS------------IN----------KYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        92 ~~y~~~~~LG~G~f-g~V~~a~~~~~~~~vAiK~~~~------------~~----------~~~~~~~~E~~il~~l~~~  148 (405)
                      ..++.++.||.|.- |.||+++..  |+.||||+++.            ..          ...+.+..|.....+|.+.
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            56899999999999 999999874  77999999421            00          1223456677777777665


Q ss_pred             CCCCC----c--cccCC-HHH------------------------------HHHHHHHHHHHHHHHHHCCcEecCCCCCc
Q 015532          149 DIGGT----R--YRSFP-IDL------------------------------VRELGRQLLESVAFMHELRLIHTDLKPEN  191 (405)
Q Consensus       149 ~~~~~----~--~~~l~-~~~------------------------------~~~~~~qi~~aL~~LH~~givHrDlkp~N  191 (405)
                      +-.+.    .  +-.++ +.+                              ...-+.+|++-|..+|..||+-+|+|+.|
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~~~~~~~~~~~~~dl~~~~k~gI~~~Dv~~~n  194 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDPPLQIRDIPQMLRDLKILHKLGIVPRDVKPRN  194 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCccccchhHHHHHHHHHHHHHHCCeeeccCcccc
Confidence            44221    1  11112 111                              22346788999999999999999999999


Q ss_pred             EE
Q 015532          192 IL  193 (405)
Q Consensus       192 Il  193 (405)
                      ..
T Consensus       195 y~  196 (207)
T PF13095_consen  195 YR  196 (207)
T ss_pred             cc
Confidence            97

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.72  E-value=0.00021  Score=60.26  Aligned_cols=98  Identities=23%  Similarity=0.222  Sum_probs=67.5

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCcc--------------ccCC
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY--------------RSFP  159 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~~--------------~~l~  159 (405)
                      -++.+.|++|++|.||+|.+.  |..+|+|+-+ .+..+..+..|.++|..+....+....+              ..|.
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr-~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~  100 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRR-RDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLG  100 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc--CceEEEEEec-CCcchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchh
Confidence            355788999999999999975  5689999754 4556777889999999998877644332              1222


Q ss_pred             HHHH---HHHHHHHHHHHHHHHHCCcEecCCCC-C-cEEE
Q 015532          160 IDLV---RELGRQLLESVAFMHELRLIHTDLKP-E-NILL  194 (405)
Q Consensus       160 ~~~~---~~~~~qi~~aL~~LH~~givHrDlkp-~-NIli  194 (405)
                      .-..   ++-+..++++---|-..||-|+.|.- . ||++
T Consensus       101 ~~~~~~~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv  140 (201)
T COG2112         101 KLEIGGDRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLV  140 (201)
T ss_pred             hhhhcccHHHHHHHHHHHHHHHHhccchhhhcCCceeEEe
Confidence            2222   34445566665556678999999863 3 5554

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.69  E-value=4.8e-05  Score=67.30  Aligned_cols=40  Identities=35%  Similarity=0.471  Sum_probs=35.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       159 ~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                      +......++.+++..+.-||.+||+|+|+++.|||++.++
T Consensus       116 ~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  116 DPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             chhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC
Confidence            3456678999999999999999999999999999997653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.62  E-value=0.00095  Score=70.95  Aligned_cols=180  Identities=27%  Similarity=0.420  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHhhcCCCCCc-------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcE
Q 015532          135 AMIEIDVLQRLARHDIGGTR-------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLI  183 (405)
Q Consensus       135 ~~~E~~il~~l~~~~~~~~~-------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~giv  183 (405)
                      ...|+..+.++.|.+.++..                               ....+.+.++.+..+++.||.|+|+... 
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l-  307 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSL-  307 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcc-
Confidence            34567788888888875533                               1345677888899999999999999843 


Q ss_pred             ecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce--eccCCCCccccCCccc--eecCCCcchhHHHhC
Q 015532          184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK--LIDFGSTTFEHQDHSY--VVSTRHYRAPEVILG  259 (405)
Q Consensus       184 HrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k--l~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~  259 (405)
                            .|+.+.......                 ...+....+.  +.||+...........  ...+..+.++|....
T Consensus       308 ------~~v~L~~s~~~~-----------------~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~  364 (1351)
T KOG1035|consen  308 ------EHVVLSASSSKE-----------------STVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKE  364 (1351)
T ss_pred             ------ceeEEecccccc-----------------cccCccceeecchhhhcccccCCCcccchhhcCcccccccccccc
Confidence                  444443221000                 0011222233  3377766554433322  234556778888776


Q ss_pred             CCCCC--chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhh
Q 015532          260 LGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS  337 (405)
Q Consensus       260 ~~~~~--~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (405)
                      ..+..  ..|+|.+|.....+..|..+-....      .+..+++                                   
T Consensus       365 ~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~------~~~~~l~-----------------------------------  403 (1351)
T KOG1035|consen  365 NTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA------VPVSLLD-----------------------------------  403 (1351)
T ss_pred             ccchhhhhhHHHHHHHHHhhhhhcCccccccc------chhhhhc-----------------------------------
Confidence            65554  4799999999999887765432110      0000000                                   


Q ss_pred             HHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCCCc
Q 015532          338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT  397 (405)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~~~  397 (405)
                                        ........+++.+|+.-++++|+++.+++.|+|.+.+...+.
T Consensus       404 ------------------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~~~  445 (1351)
T KOG1035|consen  404 ------------------VLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPTDNES  445 (1351)
T ss_pred             ------------------cccchhhhhhhhhhcchhhhhccchhhhhhchhccccccccc
Confidence                              000114568899999999999999999999999987765444

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.18  E-value=0.0039  Score=55.67  Aligned_cols=51  Identities=24%  Similarity=0.282  Sum_probs=40.3

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      ++.|+.|..+.||++....  ..+++|+.... ........|..+++.+....+
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~   52 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGI   52 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTS
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCC
Confidence            4689999999999999764  47899998665 445667789999998877644

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.92  E-value=0.0089  Score=53.62  Aligned_cols=47  Identities=17%  Similarity=0.142  Sum_probs=33.5

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcC
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD  149 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~  149 (405)
                      ..||+|..+.||+..    +..+++|+..... ......+|.++++.+....
T Consensus         7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~g   53 (226)
T TIGR02172         7 TQTGEGGNGESYTHK----TGKWMLKLYNPGF-DKETIKREFDASRKVFSLG   53 (226)
T ss_pred             eeecCCCCcceeEec----CCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcC
Confidence            578999999999842    3357789875422 3345678999998887543

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.77  E-value=0.012  Score=52.83  Aligned_cols=52  Identities=13%  Similarity=0.282  Sum_probs=32.3

Q ss_pred             EeeeecccceeEEEEEecC-CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           97 LSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      ++.|..|-...+|++.... .++.|++|+........-...+|+.+++.+...
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~   55 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH   55 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC
Confidence            4567788888999887543 345688887653222112233577777777553

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.68  E-value=0.0063  Score=60.85  Aligned_cols=28  Identities=21%  Similarity=0.233  Sum_probs=24.8

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEec
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVR  126 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~  126 (405)
                      +.||.-+.|.||+|+.+. |+.||||+-+
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~  194 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQH  194 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecC
Confidence            579999999999999876 9999999854

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.46  E-value=0.017  Score=51.99  Aligned_cols=44  Identities=16%  Similarity=0.165  Sum_probs=27.5

Q ss_pred             eeeecccce-eEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhh
Q 015532           98 SKMGEGTFG-QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        98 ~~LG~G~fg-~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~  147 (405)
                      +.|+.|+.. .||+..     ..+++|+.+. ........+|.+++..|..
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~   47 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAP   47 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhc
Confidence            467766666 488752     2366787544 2234467778888887764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK05231 homoserine kinase; Provisional

Probab=96.34  E-value=0.016  Score=54.81  Aligned_cols=48  Identities=15%  Similarity=0.107  Sum_probs=29.8

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      ++.|+.|....+|+.... +| .+++|++..  ...+....|+.++..|...
T Consensus        27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~   74 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--LTAEDLPFFLGLMQHLAAR   74 (319)
T ss_pred             cchhccccccceEEEEeC-CC-cEEEEEecc--CChHHhHHHHHHHHHHHHC
Confidence            356777777888988753 33 578898752  2233444566777776543

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.12  E-value=0.065  Score=50.83  Aligned_cols=100  Identities=26%  Similarity=0.270  Sum_probs=70.5

Q ss_pred             EEEeeeecccceeEEEEEecCCCcEEEEEEecch---------------------------hhhhHHHHHHHHHHHHHhh
Q 015532           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---------------------------NKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---------------------------~~~~~~~~~E~~il~~l~~  147 (405)
                      .+-..|..|--+.||.|.. .+|..+|||+++..                           ....--+..|+..|++|..
T Consensus       147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            3455677888889999986 56777999987521                           1112234468889999877


Q ss_pred             cCCCC-----------------C--------ccccCCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCCCcEEEe
Q 015532          148 HDIGG-----------------T--------RYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLV  195 (405)
Q Consensus       148 ~~~~~-----------------~--------~~~~l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIli~  195 (405)
                      ..|..                 .        ....++...+..+-.|++.-+.-|- .+++||.||.-=|+|+-
T Consensus       226 aGIP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh  299 (520)
T KOG2270|consen  226 AGIPCPEPILLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH  299 (520)
T ss_pred             cCCCCCCceeeecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE
Confidence            55411                 0        0234566778888888888777665 67999999999999984

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.06  E-value=0.011  Score=54.83  Aligned_cols=114  Identities=18%  Similarity=0.220  Sum_probs=77.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecc----------hh-------------hhhHHHHHHHHHHHHHhhcC
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----------IN-------------KYREAAMIEIDVLQRLARHD  149 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~----------~~-------------~~~~~~~~E~~il~~l~~~~  149 (405)
                      -|.+.+.||-|--+-||.+-+. .|+..++|+-+.          ..             -.+-...+|...|+.|..+.
T Consensus        93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            3778899999999999999884 566788995321          00             01234567899999987754


Q ss_pred             CCC-------------CccccCC------HHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          150 IGG-------------TRYRSFP------IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       150 ~~~-------------~~~~~l~------~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                      ...             .+...+|      ...+..+...++.-+.-|-.+|+||+|..-=||++..++.++++||.-
T Consensus       172 fpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFPQ  248 (465)
T KOG2268|consen  172 FPVPKPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFPQ  248 (465)
T ss_pred             CCCCCcccccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEEEeechH
Confidence            311             0111122      223334555666666778899999999999999999887777777753

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.98  E-value=0.053  Score=50.85  Aligned_cols=51  Identities=18%  Similarity=0.156  Sum_probs=29.9

Q ss_pred             eeeecccceeEEEEEecC------CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           98 SKMGEGTFGQVVECFDNE------KKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~------~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      +.|..|-...||++....      .++.|++|+............+|..++..+...
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~   60 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER   60 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC
Confidence            456666666788776533      246788888654322223345566666666543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.96  E-value=0.019  Score=53.62  Aligned_cols=49  Identities=10%  Similarity=0.083  Sum_probs=34.0

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcC
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD  149 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~  149 (405)
                      ++.|..|....+|+....  +..+++|+...  ...+....|+.++..|.+..
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g   67 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEK--VSAEELPFFLALLDHLAERG   67 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCC--CChHhccHHHHHHHHHHHCC
Confidence            567888888899988643  33588898764  23445667888888886644

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=95.95  E-value=0.083  Score=46.23  Aligned_cols=98  Identities=16%  Similarity=0.235  Sum_probs=59.4

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchh-----------------hhhHHHHHHHHHHHHHh-hcCCCCCc-----
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------KYREAAMIEIDVLQRLA-RHDIGGTR-----  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----------------~~~~~~~~E~~il~~l~-~~~~~~~~-----  154 (405)
                      ..||+|+.-.||.--   ......||+++...                 .......+|+.....+. ........     
T Consensus         7 ~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            479999999998633   23346789986544                 22355677888777777 43321100     


Q ss_pred             -------------------cccC--CHHHHH-------HHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 -------------------YRSF--PIDLVR-------ELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 -------------------~~~l--~~~~~~-------~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                         .+.+  +.....       .+...+-.-.+||-+++|+.+||+|.||++...+
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTEELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccHHHHHHHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence                               1111  111111       2233333445588899999999999999997643

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02721 ycfN_thiK thiamine kinase

Probab=95.87  E-value=0.039  Score=50.38  Aligned_cols=48  Identities=13%  Similarity=0.002  Sum_probs=28.5

Q ss_pred             eecccceeEEEEEecCCCcEEEEEEecchhhhh-HHHHHHHHHHHHHhhcC
Q 015532          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHD  149 (405)
Q Consensus       100 LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~-~~~~~E~~il~~l~~~~  149 (405)
                      +..|-.+.+|+..  .+++.+++|+........ -...+|..+++.+....
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g   52 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALG   52 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcC
Confidence            4556677888776  345567788754322111 12456888888876543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.80  E-value=0.04  Score=49.89  Aligned_cols=46  Identities=22%  Similarity=0.112  Sum_probs=28.8

Q ss_pred             eeecccc-eeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           99 KMGEGTF-GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        99 ~LG~G~f-g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      .|-.|.. +.||++...  +..+.||+.....  .....+|+.+++.+...
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~   51 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK   51 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc
Confidence            4455555 778888653  3567788765432  23456788888877653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.80  E-value=0.013  Score=64.59  Aligned_cols=96  Identities=16%  Similarity=0.099  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHHHHHHC-----CcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCcc
Q 015532          163 VRELGRQLLESVAFMHEL-----RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF  237 (405)
Q Consensus       163 ~~~~~~qi~~aL~~LH~~-----givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  237 (405)
                      +.....+.+.+..-+|+.     -.+|++||+-|.+|..+-                           .+++.++|+.+.
T Consensus      1337 v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny---------------------------~v~~gk~gLdKI 1389 (2724)
T KOG1826|consen 1337 VHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNY---------------------------NVKLGKGGLDKI 1389 (2724)
T ss_pred             HHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCC---------------------------cccccccccccc
Confidence            333334446666777743     268999999999987644                           456666666663


Q ss_pred             ccCCcc---ceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          238 EHQDHS---YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       238 ~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                      ......   ..++++.|+++++.....++.++|+|+.|+.+|+...|..+|
T Consensus      1390 knp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1390 KNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             cCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            322222   246788999999998888998899999999999998887766

>PLN02876 acyl-CoA dehydrogenase

Probab=95.57  E-value=0.16  Score=54.67  Aligned_cols=50  Identities=16%  Similarity=0.108  Sum_probs=35.1

Q ss_pred             EeeeecccceeEEEEEecCCC--cEEEEEEecchh--hhhHHHHHHHHHHHHHh
Q 015532           97 LSKMGEGTFGQVVECFDNEKK--ELVAIKIVRSIN--KYREAAMIEIDVLQRLA  146 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~--~~vAiK~~~~~~--~~~~~~~~E~~il~~l~  146 (405)
                      ++.|+.|.++.+|+......+  ..+++|+.....  .....+.+|+.+|+.+.
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~   96 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG   96 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh
Confidence            577899999999998765432  357777754322  12345778999999986

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.41  E-value=0.14  Score=48.08  Aligned_cols=50  Identities=12%  Similarity=0.016  Sum_probs=31.7

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      .++.++.|....+|++.. .++ .+++|+..... ..+....|++++..|...
T Consensus        26 ~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~   75 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KAEELPFFLALTTHLAAR   75 (307)
T ss_pred             eccccCCccccceEEEEe-CCC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHC
Confidence            356778887788998864 344 46788875421 123445677777777543

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02236 choline kinase

Probab=95.29  E-value=0.11  Score=49.64  Aligned_cols=54  Identities=13%  Similarity=0.010  Sum_probs=31.8

Q ss_pred             EeeeecccceeEEEEEecC----CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           97 LSKMGEGTFGQVVECFDNE----KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~----~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      +..|-.|-...+|++....    .++.|++|+........-....|..+++.+....+
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl   98 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQ   98 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCC
Confidence            4456557778888886432    24678888775432211122457777777766544

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=95.27  E-value=0.12  Score=49.11  Aligned_cols=53  Identities=11%  Similarity=0.205  Sum_probs=28.1

Q ss_pred             eeeecccceeEEEEEecCC---CcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           98 SKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      +.|..|-...+|++.....   +..|++|+........-...+|..+++.+....+
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl   75 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGF   75 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCC
Confidence            4454566667787764322   2367788764322211122356667766665443

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.20  E-value=0.02  Score=56.40  Aligned_cols=96  Identities=22%  Similarity=0.216  Sum_probs=66.6

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHH
Q 015532          264 YPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK  343 (405)
Q Consensus       264 ~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (405)
                      +|+||||+|.++.++.-|...+......+.+..+.+.. ..+.....-.++.                            
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~-~~d~~~~~~a~e~----------------------------  160 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYY-TDDQELLSTAMEH----------------------------  160 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHH----------------------------
Confidence            59999999999999999998887766666666555432 2222211111100                            


Q ss_pred             hccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCCCc
Q 015532          344 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT  397 (405)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~~~  397 (405)
                               ...-..+..+.+++.+|+-..|..||...++.+++-|......++
T Consensus       161 ---------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev~~~~t  205 (725)
T KOG1093|consen  161 ---------LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEVYKDLT  205 (725)
T ss_pred             ---------HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHHHhhhh
Confidence                     000123456789999999999999999999999998877655444

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=95.11  E-value=0.18  Score=49.01  Aligned_cols=51  Identities=24%  Similarity=0.268  Sum_probs=36.4

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecc------h--hhhhHHHHHHHHHHHHHhh
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRS------I--NKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~------~--~~~~~~~~~E~~il~~l~~  147 (405)
                      .+.||.|.+..||++.+..+++.|.||.-..      .  ....+....|.+.|+.+..
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~   89 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAK   89 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHh
Confidence            4689999999999999865446799997421      0  1234566778888887643

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=94.76  E-value=0.3  Score=45.20  Aligned_cols=47  Identities=26%  Similarity=0.111  Sum_probs=30.1

Q ss_pred             eeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhh
Q 015532           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~  147 (405)
                      ..++|-...|+.+.+ ..|+.+++|+-+. ........+|..+|..|..
T Consensus        18 ~~~~g~~~~v~~i~~-~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~   64 (276)
T cd05152          18 LNESGLDFQVVFAKD-TDGVPWVLRIPRR-PDVSERAAAEKRVLALVRK   64 (276)
T ss_pred             ecCCcceeEEEEEEc-CCCCeEEEEecCC-HHHHHHHHHHHHHHHHHHh
Confidence            345555556666643 3466788887653 2234557889999998875

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PHA03111 Ser/Thr kinase; Provisional

Probab=93.87  E-value=0.093  Score=49.01  Aligned_cols=66  Identities=21%  Similarity=0.336  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHHHHHHH----CCcEecCCCCCcEEEecccc---cccCCccccccCCCCCCcccCCCCCCCceeccCC
Q 015532          161 DLVRELGRQLLESVAFMHE----LRLIHTDLKPENILLVSAEY---VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG  233 (405)
Q Consensus       161 ~~~~~~~~qi~~aL~~LH~----~givHrDlkp~NIli~~~~~---~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  233 (405)
                      +-++.++.||+.-.-.+-+    .+.+|-||||+|||+-+...   +++.|-.++            ..+....+|-||.
T Consensus       279 ~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~v------------F~Epi~~~LnDFD  346 (444)
T PHA03111        279 EYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYV------------FNEPIKACLNDFD  346 (444)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEE------------eccchhhhhcccC
Confidence            3456678888765544432    46899999999999865432   222222111            2234456788888


Q ss_pred             CCccc
Q 015532          234 STTFE  238 (405)
Q Consensus       234 ~a~~~  238 (405)
                      ++...
T Consensus       347 fSqv~  351 (444)
T PHA03111        347 FSQVA  351 (444)
T ss_pred             HHHHc
Confidence            77543

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.84  E-value=0.16  Score=48.96  Aligned_cols=41  Identities=24%  Similarity=0.390  Sum_probs=28.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCCCcEEEeccc
Q 015532          158 FPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       158 l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIli~~~~  198 (405)
                      .++...++++.-...||.-+- -.+.+|.|+.|.||++.-+.
T Consensus       341 ~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  341 QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            345566666665566654433 56899999999999997544

>PRK11768 serine/threonine protein kinase; Provisional

Probab=93.83  E-value=1  Score=42.79  Aligned_cols=43  Identities=21%  Similarity=0.069  Sum_probs=28.5

Q ss_pred             ceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532          105 FGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus       105 fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      -..||+... .++..+++|+.+...........|+.++..|...
T Consensus        38 eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~   80 (325)
T PRK11768         38 ENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEA   80 (325)
T ss_pred             cceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC
Confidence            356888765 3455688998764433455666788888877654

>PRK12396 5-methylribose kinase; Reviewed

Probab=93.79  E-value=0.55  Score=45.52  Aligned_cols=51  Identities=27%  Similarity=0.341  Sum_probs=34.7

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEe----cch---hhhhHHHHHHHHHHHHHhh
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSI---NKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~----~~~---~~~~~~~~~E~~il~~l~~  147 (405)
                      .+.||-|.-..||++.+...++.|+||.-    +..   ....++...|.++|+.+..
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~   91 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEE   91 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHh
Confidence            57899999999999998544567999964    211   2234555667777776543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=93.60  E-value=0.093  Score=45.54  Aligned_cols=52  Identities=19%  Similarity=0.195  Sum_probs=44.5

Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCCCcEEEecccccccCCcccc
Q 015532          157 SFPIDLVRELGRQLLESVAFMHE---LRLIHTDLKPENILLVSAEYVKVPDYKFL  208 (405)
Q Consensus       157 ~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIli~~~~~~k~~df~~~  208 (405)
                      .-+|..+.+++.+++..+++|+.   ..+.-.|++++|+-++.+|.+|+.|...+
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v  109 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDV  109 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhc
Confidence            46889999999999999999997   45778999999999998888877776543

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=93.31  E-value=0.53  Score=45.03  Aligned_cols=48  Identities=23%  Similarity=0.302  Sum_probs=32.3

Q ss_pred             eeecccceeEEEEEecCCCcEEEEEEec----c----hhhhhHHHHHHHHHHHHHh
Q 015532           99 KMGEGTFGQVVECFDNEKKELVAIKIVR----S----INKYREAAMIEIDVLQRLA  146 (405)
Q Consensus        99 ~LG~G~fg~V~~a~~~~~~~~vAiK~~~----~----~~~~~~~~~~E~~il~~l~  146 (405)
                      .||-|....||++.+..+++.|+||.-.    .    .....++...|...|+...
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~   57 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQG   57 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhh
Confidence            5899999999999986444679999642    1    1223344556777776643

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=92.50  E-value=0.079  Score=42.26  Aligned_cols=79  Identities=27%  Similarity=0.378  Sum_probs=46.7

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCccccCCH-HHHHHHHHHHHHHHHH
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPI-DLVRELGRQLLESVAF  176 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~~~~l~~-~~~~~~~~qi~~aL~~  176 (405)
                      +.||.|+.|.||+|+.+. |+.||||+.+.  ...+.+...+.+|+.+..---.-.....++. ..+..+..++..=|+|
T Consensus        17 ~PlasASiaQVh~a~l~~-g~~VaVKV~rP--~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf   93 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKD-GEEVAVKVQRP--GIEEQIEADLRILRRLARLLERLPPFRRLDLEEIVDEFRDSLLEELDF   93 (119)
T ss_pred             chhhheehhhheeeeecc-cchhhhhhcch--HHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHHHHHHHHHHHHhCH
Confidence            579999999999999854 88999999764  2334444555555544321100000002333 3444555666666777


Q ss_pred             HHH
Q 015532          177 MHE  179 (405)
Q Consensus       177 LH~  179 (405)
                      .++
T Consensus        94 ~~E   96 (119)
T PF03109_consen   94 RRE   96 (119)
T ss_pred             HHH
Confidence            664

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PTZ00384 choline kinase; Provisional

Probab=92.47  E-value=1.5  Score=42.55  Aligned_cols=55  Identities=20%  Similarity=0.228  Sum_probs=28.3

Q ss_pred             EEeeeecccceeEEEEEecCC-Cc-----EEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           96 ILSKMGEGTFGQVVECFDNEK-KE-----LVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~-~~-----~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      .++.|..|-...+|++..... +.     .|.+++........-...+|+++++.+....+
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~gl  114 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNF  114 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCC
Confidence            345666687888888865332 11     24444321111111122457777777766554

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=91.62  E-value=0.27  Score=46.20  Aligned_cols=17  Identities=35%  Similarity=0.391  Sum_probs=15.3

Q ss_pred             CCcEecCCCCCcEEEec
Q 015532          180 LRLIHTDLKPENILLVS  196 (405)
Q Consensus       180 ~givHrDlkp~NIli~~  196 (405)
                      .+++|+|+.+.||+++.
T Consensus       187 ~~liHgD~~~~Nil~~~  203 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD  203 (313)
T ss_pred             CceEcCCCCcccEEEeC
Confidence            58999999999999865

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=91.55  E-value=0.17  Score=47.51  Aligned_cols=68  Identities=19%  Similarity=0.157  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHHHHH----HCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCcc
Q 015532          162 LVRELGRQLLESVAFMH----ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF  237 (405)
Q Consensus       162 ~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  237 (405)
                      -++.++.||+.-.--+-    ..+.+|-||||+|||+-+....-...++-..         -...+....+|-||.++..
T Consensus       276 YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~---------~vF~Epi~~~LnDFDfSqv  346 (434)
T PF05445_consen  276 YVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRN---------YVFKEPIRCCLNDFDFSQV  346 (434)
T ss_pred             HHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeE---------EEecccceeeecccCHHHh
Confidence            34556677654332122    3468999999999998654322111111000         0022344568888887754


Q ss_pred             c
Q 015532          238 E  238 (405)
Q Consensus       238 ~  238 (405)
                      .
T Consensus       347 ~  347 (434)
T PF05445_consen  347 A  347 (434)
T ss_pred             c
Confidence            4

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=91.15  E-value=1.3  Score=42.07  Aligned_cols=49  Identities=20%  Similarity=0.182  Sum_probs=33.2

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      ..|.+ .-..||+.... .|+ +++|+.+.. ....+...|+..|..|....+
T Consensus        32 ~~l~s-~eN~~f~~~~~-~g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i   80 (331)
T COG2334          32 RGLNS-EENSNFRVQTE-DGR-YILKIYRPG-WTRAEIPFELALLQHLAERGI   80 (331)
T ss_pred             ccccc-ccCceEEEEec-CCC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCC
Confidence            34455 45578888764 344 389998776 556667778888888876544

>PRK10271 thiK thiamine kinase; Provisional

Probab=90.00  E-value=0.26  Score=42.53  Aligned_cols=17  Identities=18%  Similarity=0.382  Sum_probs=14.6

Q ss_pred             cEecCCCCCcEEEeccc
Q 015532          182 LIHTDLKPENILLVSAE  198 (405)
Q Consensus       182 ivHrDlkp~NIli~~~~  198 (405)
                      .+|+|+.|.||+++.+|
T Consensus        79 p~H~D~~~~N~~~~~~~   95 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG   95 (188)
T ss_pred             eecCCCCCccEEEECCC
Confidence            59999999999987654

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=89.45  E-value=0.23  Score=43.84  Aligned_cols=36  Identities=25%  Similarity=0.411  Sum_probs=29.0

Q ss_pred             HHHHHHHHH--CCcEecCCCCCcEEEecccccccCCcc
Q 015532          171 LESVAFMHE--LRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       171 ~~aL~~LH~--~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                      +.+|.-.|+  .+.+|+|..|+|||.+..|.+|+.|=+
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCCCCEEecChh
Confidence            566788883  579999999999999888877666644

The function of this family is unknown.

>PTZ00296 choline kinase; Provisional

Probab=89.17  E-value=2.6  Score=41.82  Aligned_cols=55  Identities=16%  Similarity=0.146  Sum_probs=31.6

Q ss_pred             EEeeeecccceeEEEEEecC--------CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           96 ILSKMGEGTFGQVVECFDNE--------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~--------~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      -++.|..|-...+|++....        .++.|.+++.-......-....|..+++.+....+
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi  171 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRI  171 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCC
Confidence            45667777777888886532        14578888764322211223446666666665444

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=86.46  E-value=0.7  Score=43.46  Aligned_cols=25  Identities=16%  Similarity=0.167  Sum_probs=18.8

Q ss_pred             CcEecCCCCCcEEEecccccccCCc
Q 015532          181 RLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       181 givHrDlkp~NIli~~~~~~k~~df  205 (405)
                      ++||+|+.+.|||++.++.+.+.||
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDf  221 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINF  221 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEh
Confidence            7999999999999976554333333

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=85.91  E-value=0.72  Score=42.47  Aligned_cols=35  Identities=23%  Similarity=0.248  Sum_probs=23.1

Q ss_pred             HHHHHHHHHHHHHHC--CcEecCCCCCcEEEeccccc
Q 015532          166 LGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       166 ~~~qi~~aL~~LH~~--givHrDlkp~NIli~~~~~~  200 (405)
                      .+..+-.++.-.+..  -++|+|+.|+|+|.+..|.+
T Consensus       137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l  173 (269)
T COG0510         137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGL  173 (269)
T ss_pred             HHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcE
Confidence            344444445544433  58999999999998764433

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=85.04  E-value=1.5  Score=41.82  Aligned_cols=48  Identities=17%  Similarity=0.219  Sum_probs=34.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccc
Q 015532          159 PIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       159 ~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                      ..+++..++.+.+.-+.-+..+ ..-|||+.-.||||+ +|.+.++||.+
T Consensus       319 ~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfkl  367 (488)
T COG5072         319 RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKL  367 (488)
T ss_pred             cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeee
Confidence            3567777877777666666643 688999999999998 66554444443

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=85.00  E-value=0.38  Score=42.40  Aligned_cols=18  Identities=39%  Similarity=0.613  Sum_probs=11.9

Q ss_pred             CcEecCCCCCcEEE-eccc
Q 015532          181 RLIHTDLKPENILL-VSAE  198 (405)
Q Consensus       181 givHrDlkp~NIli-~~~~  198 (405)
                      .++|+|+.+.|||+ ..++
T Consensus       144 v~cHnDl~~~Nil~~~~~~  162 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDG  162 (211)
T ss_dssp             EEE-S--SGGGEEETSSSS
T ss_pred             eEeeccCccccEEeccCCC
Confidence            58999999999999 4444

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	405
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		1e-73
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		1e-70
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		1e-70
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		2e-70
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-65
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		3e-64
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		1e-52
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-40
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-40
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-39
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		2e-37
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		3e-37
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-36
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		5e-34
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		6e-34
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		1e-32
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		4e-25
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		4e-25
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		8e-24
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-21
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-21
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-21
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-21
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-21
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		4e-21
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		4e-21
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-21
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-21
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-21
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		5e-21
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-21
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-21
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		5e-21
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		5e-21
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		5e-21
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		5e-21
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		5e-21
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		5e-21
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		5e-21
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-21
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-21
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-21
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-21
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-21
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-21
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		6e-21
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-21
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		6e-21
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-21
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		6e-21
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		7e-21
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		7e-21
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-21
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-21
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-21
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		9e-21
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		1e-20
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-20
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-20
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-20
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-20
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-20
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-20
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-20
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-20
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-20
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-20
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-20
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-20
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-20
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-20
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-20
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-20
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-20
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-20
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-20
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-20
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-20
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-20
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-20
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-20
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-20
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-20
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-20
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-20
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-20
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-20
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-20
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-20
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-20
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-20
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-20
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-20
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-20
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-20
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-20
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-20
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-20
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-20
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-20
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-20
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-20
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-20
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-20
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-20
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-20
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-20
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-20
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-20
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-20
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-20
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-20
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-20
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-20
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-20
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-20
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-20
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-20
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-20
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-20
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-20
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-20
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-20
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-20
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-20
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-20
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-20
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-20
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-20
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-20
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-20
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		4e-20
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-20
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-20
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		6e-20
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-19
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-19
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-19
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-19
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-19
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-19
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-19
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-19
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		7e-19
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		8e-19
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-18
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		4e-18
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		5e-18
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-18
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		9e-18
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-17
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-17
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-17
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-17
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-17
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-17
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-17
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-17
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		3e-17
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-17
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-17
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-17
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-17
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-17
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-17
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-17
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-17
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-17
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-17
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		3e-17
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-17
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		4e-17
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-17
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-17
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-17
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-17
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		5e-17
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-17
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		5e-17
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		5e-17
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		5e-17
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		5e-17
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		5e-17
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-17
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		5e-17
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		5e-17
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-17
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		5e-17
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-17
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-17
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		6e-17
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-17
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		6e-17
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		6e-17
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		7e-17
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		7e-17
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		7e-17
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		7e-17
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		9e-17
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		9e-17
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-16
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-16
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-16
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		1e-16
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		1e-16
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-16
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		1e-16
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		1e-16
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		1e-16
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-16
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		1e-16
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		1e-16
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-16
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-16
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-16
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-16
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-16
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-16
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		2e-16
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-16
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-16
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		3e-16
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		3e-16
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-16
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		3e-16
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-16
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		4e-16
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-16
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-16
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		7e-16
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		8e-16
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		8e-16
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		8e-16
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		8e-16
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		8e-16
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		9e-16
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		9e-16
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		9e-16
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		9e-16
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		9e-16
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		9e-16
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		9e-16
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-15
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-15
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-15
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		2e-15
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-15
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-15
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-15
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		3e-15
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		4e-15
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		4e-15
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		4e-15
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-15
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-14
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		3e-14
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		4e-14
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		4e-14
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		4e-14
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		4e-14
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		4e-14
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		4e-14
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		4e-14
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		4e-14
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		5e-14
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		2e-13
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		3e-13
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		3e-13
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		5e-13
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		7e-13
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		8e-13
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-12
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		2e-12
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-12
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-11
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		4e-11
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-11
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		6e-11
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		6e-11
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		7e-11
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-11
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		8e-11
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		1e-10
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-10
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-10
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-10
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-10
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-10
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-10
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-10
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-10
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-10
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-10
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-10
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		2e-10
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-10
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-10
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-10
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-10
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-10
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-10
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-10
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-10
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-10
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-10
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-10
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-10
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-10
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-10
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		5e-10
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-10
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		5e-10
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		6e-10
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		6e-10
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		6e-10
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-10
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-10
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-10
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		6e-10
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		7e-10
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		7e-10
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		7e-10
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		7e-10
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		7e-10
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		7e-10
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		7e-10
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		8e-10
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		8e-10
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-10
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		8e-10
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		8e-10
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		8e-10
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		9e-10
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-09
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-09
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-09
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-09
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-09
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-09
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-09
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-09
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-09
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-09
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-09
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-09
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-09
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-09
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-09
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-09
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-09
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		4e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-09
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-09
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		4e-09
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		4e-09
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		4e-09
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-09
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		4e-09
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-09
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-09
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		4e-09
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		4e-09
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		5e-09
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-09
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-09
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		5e-09
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-09
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		5e-09
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		5e-09
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		5e-09
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-09
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-09
4fie_A	423	Full-Length Human Pak4 Length = 423		5e-09
3a7f_A	303	Human Mst3 Kinase Length = 303		5e-09
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		6e-09
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		6e-09
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		6e-09
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		6e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-09
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		6e-09
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		6e-09
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-09
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		6e-09
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		6e-09
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		6e-09
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		6e-09
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		6e-09
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		6e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-09
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		6e-09
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		6e-09
2oza_A	356	Structure Of P38alpha Complex Length = 356		7e-09
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		7e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		7e-09
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-09
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-09
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-09
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		7e-09
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		7e-09
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		7e-09
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		7e-09
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-09
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-09
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		7e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		7e-09
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		7e-09
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		7e-09
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		7e-09
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		7e-09
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		7e-09
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-09
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		7e-09
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-09
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		8e-09
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		8e-09
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		8e-09
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		8e-09
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-09
4ae9_A	343	Structure And Function Of The Human Sperm-specific		8e-09
4ae6_A	343	Structure And Function Of The Human Sperm-specific		8e-09
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		9e-09
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		9e-09
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		9e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-08
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-08
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-08
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-08
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-08
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-08
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-08
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-08
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-08
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-08
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-08
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-08
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-08
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-08
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-08
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		3e-08
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-08
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-08
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		4e-08
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		4e-08
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		4e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-08
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		4e-08
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		4e-08
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-08
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-08
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		4e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-08
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-08
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-08
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-08
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		5e-08
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		5e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		5e-08
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		5e-08
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		5e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-08
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		5e-08
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		5e-08
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		6e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		6e-08
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		6e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		6e-08
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		7e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		7e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		7e-08
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		7e-08
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		7e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		8e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		8e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		8e-08
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		8e-08
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-08
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		8e-08
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		8e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		9e-08
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-07
3soa_A	444	Full-Length Human Camkii Length = 444		1e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-07
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-07
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-07
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-07
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-07
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-07
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-07
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-07
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-07
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-07
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-07
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-07
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		3e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-07
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-07
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-07
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		4e-07
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-07
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		4e-07
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-07
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		4e-07
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-07
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		4e-07
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-07
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-07
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-07
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-07
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-07
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		5e-07
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		5e-07
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		5e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		5e-07
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		5e-07
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		5e-07
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-07
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		6e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		6e-07
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		6e-07
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		6e-07
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		6e-07
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		7e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		8e-07
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		8e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		8e-07
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		8e-07
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		9e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		9e-07
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		9e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		9e-07
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		9e-07
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-06
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-06
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-06
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-06
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-06
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-06
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-06
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-06
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-06
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-06
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		3e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-06
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-06
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		3e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-06
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-06
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		5e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-06
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		5e-06
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		6e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		6e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-06
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		8e-06
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		9e-06
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		9e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		9e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		9e-06
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		1e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-05
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-05
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-05
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-05
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-05
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-05
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		3e-05
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		3e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-05
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		3e-05
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-05
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-05
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		4e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		5e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		5e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		5e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		6e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		6e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		6e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		6e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		6e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-05
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		7e-05
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		7e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		7e-05
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		7e-05
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		8e-05
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		8e-05
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		8e-05
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		8e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		9e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		9e-05
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		9e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		9e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-04
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-04
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		1e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-04
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		1e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-04
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-04
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-04
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		3e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		3e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		3e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		4e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		4e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		4e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		4e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		4e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		4e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		5e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		5e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		5e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		5e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		5e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		6e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		6e-04
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		7e-04
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		7e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-04
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		7e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/351 (42%), Positives = 215/351 (61%), Gaps = 49/351 (13%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 17  DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 76
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    Y  +PI
Sbjct: 77  ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y    +   L +   + S    
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERSV--- 190
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct: 191 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R 
Sbjct: 249 GFTLFQTHDNREHLAMMERILGPIPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 305
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
             K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct: 306 NCKPLR-RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  263 bits (672), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 35  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    ++ +P+
Sbjct: 95  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH---KSCEEKSV--- 208
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 209 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 266
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 323
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 324 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  263 bits (672), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 12  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    ++ +P+
Sbjct: 72  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 185
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 186 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 243
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 300
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 301 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  263 bits (671), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 143/350 (40%), Positives = 211/350 (60%), Gaps = 49/350 (14%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    ++ +P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 176
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 177 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 291
Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 292 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  246 bits (628), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/344 (40%), Positives = 201/344 (58%), Gaps = 49/344 (14%)
Query: 81  HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
           H +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT----------------------------------RYRSFPIDLVRE 165
            VL+ L   D   T                                   +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 166 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
           +  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K      +D     N     
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
            TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +    K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           +   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  242 bits (617), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/344 (40%), Positives = 199/344 (57%), Gaps = 49/344 (14%)
Query: 81  HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
           H +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT----------------------------------RYRSFPIDLVRE 165
            VL+ L   D   T                                   +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 166 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
           +  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K      +D     N     
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            IK++DFGS T++ + HS +V  RHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
            TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +    K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           +   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 187/353 (52%), Gaps = 45/353 (12%)
Query: 73  WRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           ++ DD+  H+ +  G  L   + ++ KMG+GTFG+V+ C   + K+  A+K+VR+I KY 
Sbjct: 16  FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 133 EAAMIEIDVLQRLARHD---------------------------------IGGTRYRSFP 159
            +A IE D+L+++   D                                 I    Y  F 
Sbjct: 76  RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
           I+ ++    ++L+++ ++ ++ L HTDLKPENILL    + K        R   DG   +
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSL---ITVRRVTDGKKIQ 192
Query: 220 NL-PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
               KS+ IKLIDFG  TF+   H  +++TR YRAPEVIL LGW+   D+WS GC+L EL
Sbjct: 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252
Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-RAEKYFRRGA-RLDWPDGATSRD 336
            +G  LF+THE++EHLAMME ++ P+P +M+  A +    KY  +   +L WP+ A+S +
Sbjct: 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSIN 312
Query: 337 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           S++ V K L L  +I   +        D L  +L+ DP  R    E L+H F 
Sbjct: 313 SIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 172/365 (47%), Gaps = 70/365 (19%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
             EI +L+ L + D                                  I   +++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 335
             L    +  + LA M  +LG +P   ++ A +RA+       Y R        DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 392 DVRRP 396
            + +P
Sbjct: 415 RLPKP 419

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 174/373 (46%), Gaps = 74/373 (19%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
             EI +L+ L + D                                  I   +++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 335
             L    +  + LA M  +LG +P   ++ A +RA+       Y R        DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 392 DVRRPTLLVATGE 404
            + +P     TGE
Sbjct: 415 RLPKP----PTGE 423

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 169/360 (46%), Gaps = 70/360 (19%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
             EI +L+ L + D                                  I   +++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 335
             L    +  + LA M  +LG +P   ++ A +RA+       Y R        DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 170/367 (46%), Gaps = 87/367 (23%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 30  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 147 RHD----------------------------------IGGTRYRSFPIDLVRELGRQLLE 172
           +HD                                  +  T +R   ++L R+  +Q+  
Sbjct: 90  KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 173 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           ++ F+   EL +IH DLKPENILL +                         PK SAIK++
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 184
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
           DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ +GE LF     
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
           ++ +  +  VLG  P H++ +A  +A K+F +      PDG  +    +   +  + P  
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 298
Query: 351 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 390
              H                   H+  D +   DL+  +L YDP  R++   AL+H FF 
Sbjct: 299 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358
Query: 391 RDVRRPT 397
           +     T
Sbjct: 359 KTADEGT 365

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 87/361 (24%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHD----------------------------------IGGTRYRSFPIDLVRELGRQLLE 172
           +HD                                  +  T +R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 173 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           ++ F+   EL +IH DLKPENILL +                         PK SAIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 203
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
           DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ +GE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA----TSRDSMRAVW--KL 344
           ++ +  +  VLG  P H++ +A  +A K+F +      PDG      ++D  R       
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 345 LRLPNLI-----------MQHVDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 390
            +L N++                H+  D +   DL+  +L YDP  R++   AL+H FF 
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 391 R 391
           +
Sbjct: 378 K 378

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 168/361 (46%), Gaps = 87/361 (24%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHD----------------------------------IGGTRYRSFPIDLVRELGRQLLE 172
           +HD                                  +  T +R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 173 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           ++ F+   EL +IH DLKPENILL +                         PK  AIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRXAIKIV 203
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
           DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ +GE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
           ++ +  +  VLG  P H++ +A  +A K+F +      PDG  +    +   +  + P  
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 351 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 390
              H                   H+  D +   DL+  +L YDP  R++   AL+H FF 
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 391 R 391
           +
Sbjct: 378 K 378

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 79/387 (20%)
Query: 75  PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           P+D  K G+++  IG+    RY ++ K+G G F  V   +D + K+ VA+K+V+S   Y 
Sbjct: 2   PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 61
Query: 133 EAAMIEIDVLQRLARHD--------------------IGGT------------------- 153
           E A+ EI +L+ +   D                    + GT                   
Sbjct: 62  ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 121
Query: 154 -RYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 205
             Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++       ++
Sbjct: 122 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 181
Query: 206 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 249
           +        GS     P ++                 +K+ D G+  + H+  +  + TR
Sbjct: 182 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 241
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 303
            YR+ EV++G G+N P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG 
Sbjct: 242 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 301
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
           +P  +++ A + ++++F +        G     +    W L  +     +     A    
Sbjct: 302 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 353
Query: 364 DLLQGLLRYDPAERLKAREALRHPFFT 390
           D L  +L   P +R  A E LRHP+  
Sbjct: 354 DFLLPMLELIPEKRATAAECLRHPWLN 380

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  141 bits (356), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 79/387 (20%)
Query: 75  PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           P+D  K G+++  IG+    RY ++ K+G G F  V   +D + K+ VA+K+V+S   Y 
Sbjct: 18  PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 77
Query: 133 EAAMIEIDVLQRLARHD--------------------IGGT------------------- 153
           E A+ EI +L+ +   D                    + GT                   
Sbjct: 78  ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 137
Query: 154 -RYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 205
             Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++       ++
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 197
Query: 206 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 249
           +        GS     P ++                 +K+ D G+  + H+  +  + TR
Sbjct: 198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 257
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 303
            YR+ EV++G G+N P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG 
Sbjct: 258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 317
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
           +P  +++ A + ++++F +        G     +    W L  +     +     A    
Sbjct: 318 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 369
Query: 364 DLLQGLLRYDPAERLKAREALRHPFFT 390
           D L  +L   P +R  A E LRHP+  
Sbjct: 370 DFLLPMLELIPEKRATAAECLRHPWLN 396

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 85/385 (22%)
Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K G++   IG+    RY ++ K+G G F  V  C+D + K  VA+K+V+S   Y E A+ 
Sbjct: 17  KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 138 EIDVLQRLARHD-----------------IGG-----------------------TRYRS 157
           EI +L+ +   D                 I G                       + Y+ 
Sbjct: 77  EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 158 FPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDYKFLSR 210
            P+  V+ + RQ+L+ + ++H + ++IHTD+KPENIL+ V   YV+       +++    
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 211 SSKDGSYFKNLPKSSA--------------IKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 256
               GS     P +                +K+ D G+  + H+  +  + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 257 ILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVI 310
           ++G G++ P D+WS  C+  EL +G+ LF+ H       + +H+A +  +LG +P H  +
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 311 RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL--LRLPNLIMQHVD---HSAGDLIDL 365
                 E + RRG              +R + KL    L +++++        A    D 
Sbjct: 317 SGKYSREFFNRRG-------------ELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDF 363
Query: 366 LQGLLRYDPAERLKAREALRHPFFT 390
           L  +L   P +R  A E LRHP+  
Sbjct: 364 LIPMLEMVPEKRASAGECLRHPWLN 388

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 154/352 (43%), Gaps = 89/352 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
           RY ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR+   D   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ----------------------------------------IGGTRYRSFPIDLVRELGRQ 169
                                                   I    +R  P+  V+++ +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 170 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           LL  + +MH    +IHTD+KPEN+L+   E V  P+               NL +   IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           + D G+  +  + ++  + TR YR+PEV+LG  W    D+WS  C++ EL +G+ LF+  
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 289 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           E      + +H+A +  +LG LP ++ +R  +    +F             SR  +R + 
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 343 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           KL   P  +++ +    S   A ++ D L  +L+ DP +R  A   + HP+ 
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 154/352 (43%), Gaps = 89/352 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
           RY ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR+   D   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ----------------------------------------IGGTRYRSFPIDLVRELGRQ 169
                                                   I    +R  P+  V+++ +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 170 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           LL  + +MH    +IHTD+KPEN+L+   E V  P+               NL +   IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           + D G+  +  + ++  + TR YR+PEV+LG  W    D+WS  C++ EL +G+ LF+  
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 289 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           E      + +H+A +  +LG LP ++ +R  +    +F             SR  +R + 
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 343 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           KL   P  +++ +    S   A ++ D L  +L+ DP +R  A   + HP+ 
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 82/332 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---------IVRSINKYREAAMIE----- 138
           +Y  + K+GEG++G V +C + +  ++VAIK         +++ I   RE  M++     
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI-ALREIRMLKQLKHP 62
Query: 139 -----IDVLQRLAR-------------HDIGGTRY-RSFPIDLVRELGRQLLESVAFMHE 179
                ++V +R  R             H++   RY R  P  LV+ +  Q L++V F H+
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYCDHTVLHELD--RYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
              IH D+KPENIL+     +K+ D+ F    +    Y+ +                   
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD------------------- 161
Query: 240 QDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
                 V+TR YR+PE+++G   +  P D+W++GC+  EL SG  L+    +++ L ++ 
Sbjct: 162 -----EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216
Query: 299 RVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
           + LG L P H  + +     +YF  G ++  P+     +        L+ PN+       
Sbjct: 217 KTLGDLIPRHQQVFS---TNQYF-SGVKIPDPEDMEPLE--------LKFPNI------- 257
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            +   + LL+G L  DP ERL   + L HP+F
Sbjct: 258 -SYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 66  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 142/342 (41%), Gaps = 90/342 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
           +H DLKP+N LL++ E                           AIKL DFG   +     
Sbjct: 132 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 164
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
           + +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + 
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 299 RVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           R LG  P  +V         Y   F + AR D+       D                   
Sbjct: 225 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------ 265
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 266 -----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 121 AIKIVRSINKYREAAMIEI-DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
           ++ +  S NKY    M  + D L ++ +  I   R  S P++L+     QL  +V F+H 
Sbjct: 102 SVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGR--SIPMNLISIYIYQLFRAVGFIHS 159
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--F 237
           L + H D+KP+N+L+ S                          K + +KL DFGS     
Sbjct: 160 LGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGSAKKLI 193
Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPC-DLWSVGCILVELCSGEALFQTHENLEHLAM 296
             +     + +R YRAPE++LG     P  DLWS+GC+  EL  G+ LF    +++ L  
Sbjct: 194 PSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVR 253
Query: 297 MERVLG-PLPHHMVIRADRRAEKYFRRGARLDW----PDGATSRDSMRAVWKLLRLPNLI 351
           + +++G P    M+       E  F      DW    P+G  S                 
Sbjct: 254 IIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL---------------- 297
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                      IDLL+ +LRY+P  R+   EA+ HPFF
Sbjct: 298 ----------AIDLLEQILRYEPDLRINPYEAMAHPFF 325

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 167
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 228 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 265
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 266 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 161
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 222 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 259
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 162
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 64  VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 164
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 224
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 225 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 262
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 263 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 167
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 168 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 223 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 262
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 263 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 85  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + + S +K++DFG     
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 68  VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 166
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 222 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 261
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 67  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 165
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 221 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 260
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   +D +    +A+K        I+ +   YRE  +++      
Sbjct: 52  RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+ +                            +   +K++DFG     
Sbjct: 172 SADIIHRDLKPSNLAV---------------------------NEDCELKILDFGLARHT 204
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   +++  L  +
Sbjct: 205 DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R+ G  P  ++ R                      S ++   +  L ++P      V  
Sbjct: 265 MRLTGTPPASVISR--------------------MPSHEARNYINSLPQMPKRNFADVFI 304
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A EAL HP+F++
Sbjct: 305 GANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + + S +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLCRHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 89  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + + S +K++DFG     
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDSELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 162
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 164
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 144/341 (42%), Gaps = 88/341 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 140/349 (40%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQR-------------------------LARHDIGGTRYRSFPI-----DLVRELGRQL 170
           +L R                         L  H +G   Y+         D +     Q+
Sbjct: 94  ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQI 153
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 186
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 247 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 295
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 296 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 79  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 162 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 194
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 255 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 294
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 295 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 163 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 195
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 256 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 295
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 296 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 79  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 94  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 153
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 186
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 247 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 295
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 296 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 76  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 135
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 168
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 229 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 277
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 278 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 142/342 (41%), Gaps = 90/342 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ ++F H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
           +H DLKP+N LL++ E                           AIKL DFG   +     
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
           + +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 299 RVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           R LG  P  +V         Y   F + AR D+       D                   
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------ 258
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 -----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 26  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 81
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 82  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 141
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 174
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 235 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 283
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 284 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L      +I G     R+  I+      +V++L                        Q+
Sbjct: 76  ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 135
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +S +K+ 
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TSDLKIC 168
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 229 IFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYL-----LSLPHKN------KVPW 277
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 278 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 89  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 79  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       +      D V+ L  Q+L  + ++H
Sbjct: 79  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 139 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 171
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 232 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 271
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 21  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 81  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 140
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 141 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 173
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 234 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 273
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 274 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIX 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 79  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 138
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 171
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 232 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 280
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 281 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 133
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 166
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 227 IFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------KVPW 275
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 276 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 95  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 155 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 187
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 248 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 287
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 288 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 80  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 140 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 172
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 233 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 272
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 273 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 80  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 140 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 172
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 233 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 272
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 273 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 72  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 131
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 164
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 225 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 273
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 274 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 79  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 138
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 171
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 232 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 280
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 281 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 94  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 154 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 186
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 247 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 286
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 287 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 24  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 79
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 80  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 139
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 172
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 233 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 281
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 282 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 15  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 70
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 71  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 130
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 163
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 224 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 272
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 273 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 28  RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 88  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 95  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 155 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 187
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 248 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 287
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 288 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 95  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 155 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 187
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 248 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 287
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 288 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 85  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 88  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 89  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 163 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 195
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             +    V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 196 DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 256 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 295
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 296 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 94  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 154 SADIIHRDLKPSNL---------------------------AVNEDXELKILDFGLARHT 186
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 247 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 286
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 287 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 166 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 198
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 259 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 298
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 299 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 162 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 194
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 255 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 294
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 295 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 143/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+  +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 160
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 221 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 258
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 143/339 (42%), Gaps = 84/339 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+  +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG      + +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---RTY 159
Query: 243 SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           ++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 302 GPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           G  P  +V         Y   F + AR D+       D                      
Sbjct: 220 G-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE--------------------- 257
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 88  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 72  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 131
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 164
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 225 IFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYL-----LSLPHKN------KVPW 273
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 274 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 22  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 82  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 142 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 174
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 235 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 274
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 275 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 88  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 148 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 180
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 241 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 280
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 281 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 85  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 163 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 195
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 256 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 295
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 296 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 85  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 145 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 238 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 277
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 278 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 90  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 90  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 90  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 90  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 150 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 182
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 243 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 282
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 89  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 149 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 242 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 281
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 282 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ L+ +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 33  RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 93  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 153 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 185
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 186 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 246 LRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMPKMNFANVFI 285
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 286 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 166 SADIIHRDLKPSNL---------------------------AVNEDCELKILDFGLARHT 198
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             +    V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 199 DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 259 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 298
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 299 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 77/335 (22%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + +++ L K+G GT+  V +  +      VA+K V+  S       A+ EI +++ L   
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 149 DIG--------------------------------GTRYRSFPIDLVRELGRQLLESVAF 176
           +I                                 G   R   ++LV+    QLL+ +AF
Sbjct: 64  NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
            HE +++H DLKP+N+L+     +K+ D+               L ++  I +  F S  
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDF--------------GLARAFGIPVNTFSSE- 168
Query: 237 FEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
                    V T  YRAP+V++G   ++   D+WS GCIL E+ +G+ LF    + E L 
Sbjct: 169 ---------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK 219
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           ++  ++G  P+  +  +  +  KY     +         RD          L  ++  H 
Sbjct: 220 LIFDIMGT-PNESLWPSVTKLPKYNPNIQQ------RPPRD----------LRQVLQPHT 262
Query: 356 DHSA-GDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                G+L+D L GLL+ +P  RL A++AL HP+F
Sbjct: 263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 140/351 (39%), Gaps = 88/351 (25%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEI----- 139
           GE     Y     +G G+FG V +    E  E VAIK V    ++  RE  ++ I     
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPN 93
Query: 140 ----------------DVLQRLARHDIGGTRYR----------SFPIDLVRELGRQLLES 173
                           +V   L    +  T YR          + P+ L++    QLL S
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           +A++H + + H D+KP+N+LL                           P S  +KLIDFG
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLD--------------------------PPSGVLKLIDFG 187
Query: 234 STTF--EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
           S       + +   + +R+YRAPE+I G   +    D+WS GC++ EL  G+ LF     
Sbjct: 188 SAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
           ++ L  + +VLG  P    I+                      + + M   +  +R    
Sbjct: 248 IDQLVEIIKVLG-TPSREQIK--------------------TMNPNYMEHKFPQIRPHPF 286
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF----TRDVRRPT 397
                  +  D IDL+  LL Y P+ RL A EAL HPFF    T + R P 
Sbjct: 287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPN 337

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 146/335 (43%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+ +     +K+ D+ +L+R + D                        
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF-YLARHTDD------------------------ 177
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 178 --EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 144/349 (41%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAI+ +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L R    +I G     R+  I+      +V++L                        Q+
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 170
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 279
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 280 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 143/349 (40%), Gaps = 91/349 (26%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTR--YRSFPID------LVRELGR----------------------QL 170
           +L      +I G     R+  I+      +V++L                        Q+
Sbjct: 76  ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 135
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           L  + ++H   ++H DLKP N+LL +                           +  +K+ 
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDLKIC 168
Query: 231 DFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 283
           DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           +F     L+ L  +  +LG P    +    + +A  Y      L  P         +  W
Sbjct: 229 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------KVPW 277
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                 N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 278 ------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 143/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++D+G     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDYGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 139/333 (41%), Gaps = 87/333 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 ----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                         +     P+ L++    QLL+ +AF H  R+
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEHQ 240
           +H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ H+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYXHE 163
Query: 241 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 300 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLGT-PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               D   LL  +L YDP +R+ A+ AL HPFF
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 138/343 (40%), Gaps = 87/343 (25%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA 146
           ++ PRY  L  +GEG +G V   +D+ +K  VAIK +       Y +  + EI +L R  
Sbjct: 40  DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 147 RHDIGGTR--YRSFPIDLVRELG----------------------------RQLLESVAF 176
             ++ G R   R+  ++ +R++                              Q+L  + +
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H   ++H DLKP N+L+ +                           +  +K+ DFG   
Sbjct: 160 IHSANVLHRDLKPSNLLINT---------------------------TCDLKICDFGLAR 192
Query: 237 FEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 289
               +H +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   +F    
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 290 NLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
            L+ L  +  +LG P    +    + +A  Y +           +     +  W  L   
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-----------SLPSKTKVAWAKL--- 298
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                    S    +DLL  +L ++P +R+   EAL HP+  +
Sbjct: 299 ------FPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++ FG     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILGFGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++D G     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDAGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 153/340 (45%), Gaps = 58/340 (17%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
           +Y ++ K+G+G +G V +  D    E+VA+K I  +     +A     EI +L  L+ H+
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 150 IGGTRYRSFPIDLVREL----------------------------GRQLLESVAFMHELR 181
                      D  R++                              QL++ + ++H   
Sbjct: 70  NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           L+H D+KP NILL +  +VKV D+  LSRS      F N+ + +    +     T    D
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFG-LSRS------FVNIRRVTNNIPLSINENTENFDD 182
Query: 242 HSYV----VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
              +    V+TR YRAPE++LG   +    D+WS+GCIL E+  G+ +F     +  L  
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL-- 240
Query: 297 MERVLGPL--PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR----AVWKLLRLPNL 350
            ER++G +  P +  + +    +  F +       +    R S +      WK L L   
Sbjct: 241 -ERIIGVIDFPSNEDVES---IQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK-- 294
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           I    D +  + +DLL  LL+++P +R+ A +AL+HPF +
Sbjct: 295 INPKADCNE-EALDLLDKLLQFNPNKRISANDALKHPFVS 333

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 147/335 (43%), Gaps = 78/335 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---REAAMIE-----------I 139
           Y+++ K+G G + +V E  +    E V +KI++ + K    RE  ++E            
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITLA 98
Query: 140 DVLQ-------RLARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
           D+++        L    +  T ++     L    +R    ++L+++ + H + ++H D+K
Sbjct: 99  DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N++ +  E+ K                         ++LID+G   F H  Q+++  V
Sbjct: 159 PHNVM-IDHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRV 192
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG  
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                     I  D R      R +R  W     S +                QH+   +
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VS 294
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
            + +D L  LLRYD   RL AREA+ HP+F   V+
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++D G     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDGGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 83/335 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIE------ 138
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  +++      
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 139 ----IDVLQ-----------RLARHDIGG-----TRYRSFPIDLVRELGRQLLESVAFMH 178
               +DV              L  H +G       + +    D V+ L  Q+L  + ++H
Sbjct: 83  VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   +K++D G     
Sbjct: 143 SADIIHRDLKPSNL---------------------------AVNEDCELKILDRGLARHT 175
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
             + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   ++++ L ++
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R++G                    GA L      +S  +   +  L ++P +   +V  
Sbjct: 236 LRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMPKMNFANVFI 275
Query: 358 SAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
            A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 276 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 146/347 (42%), Gaps = 97/347 (27%)
Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMI------ 137
           +Y  ++++GEG +G+V +  D       VA+K VR         ++  RE A++      
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 138 ---------EIDVLQRLARH----------DIGGTRYR------SFPIDLVRELGRQLLE 172
                    ++  + R  R           D   T Y         P + ++++  QLL 
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            + F+H  R++H DLKP+NIL+ S                           S  IKL DF
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADF 164
Query: 233 GST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
           G     +F+    S VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   
Sbjct: 165 GLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 348
           +++ L  +  V+G LP                     DWP D A  R +  +  K  +  
Sbjct: 224 DVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPI 262
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
              +  +D       DLL   L ++PA+R+ A  AL HP+F +D+ R
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 142/341 (41%), Gaps = 96/341 (28%)
Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMI------ 137
           +Y  ++++GEG +G+V +  D       VA+K VR         ++  RE A++      
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 138 ---------EIDVLQRLARH----------DIGGTRYR------SFPIDLVRELGRQLLE 172
                    ++  + R  R           D   T Y         P + ++++  QLL 
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            + F+H  R++H DLKP+NIL+ S                           S  IKL DF
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADF 164
Query: 233 GST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
           G     +F+    S VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   
Sbjct: 165 GLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 348
           +++ L  +  V+G LP                     DWP D A  R +  +  K  +  
Sbjct: 224 DVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPI 262
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
              +  +D       DLL   L ++PA+R+ A  AL HP+F
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 146/347 (42%), Gaps = 97/347 (27%)
Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMI------ 137
           +Y  ++++GEG +G+V +  D       VA+K VR         ++  RE A++      
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 138 ---------EIDVLQRLARH----------DIGGTRYR------SFPIDLVRELGRQLLE 172
                    ++  + R  R           D   T Y         P + ++++  QLL 
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            + F+H  R++H DLKP+NIL+ S                           S  IKL DF
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADF 164
Query: 233 GST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
           G     +F+    S VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   
Sbjct: 165 GLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 348
           +++ L  +  V+G LP                     DWP D A  R +  +  K  +  
Sbjct: 224 DVDQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPI 262
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
              +  +D       DLL   L ++PA+R+ A  AL HP+F +D+ R
Sbjct: 263 EKFVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 141/314 (44%), Gaps = 44/314 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLA 146
           RY  L  +GEG F  V +  D    ++VAIK ++      + +     A+ EI +LQ L+
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 147 RHDIGGTR----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL-LVSAEYVK 201
             +I G      ++S  I LV +     LE +   + L L  + +K   ++ L   EY+ 
Sbjct: 71  HPNIIGLLDAFGHKS-NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSYV--VSTRHYRAPEVIL 258
              +  L R  K  +    L ++  +KL DFG + +F   + +Y   V TR YRAPE++ 
Sbjct: 130 --QHWILHRDLKPNNLL--LDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 259 GL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 317
           G   +    D+W+VGCIL EL           +L+ L  +   LG               
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLG--------------- 230
Query: 318 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLLRYDPAE 376
                     WPD  +  D +         P + + H+  +AG DL+DL+QGL  ++P  
Sbjct: 231 ----TPTEEQWPDMCSLPDYV----TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA 282
Query: 377 RLKAREALRHPFFT 390
           R+ A +AL+  +F+
Sbjct: 283 RITATQALKMKYFS 296

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 85/336 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMI------- 137
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE  ++       
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 138 ------------------EIDVLQRLARHDIGG-TRYRSFPIDLVRELGRQLLESVAFMH 178
                             E+ ++  L   D+    + ++   + V+ L  QLL  + ++H
Sbjct: 89  VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + + S ++++DFG     
Sbjct: 149 SAGIIHRDLKPSNV---------------------------AVNEDSELRILDFGLARQA 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M 296
            ++ +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF   + ++ L  +
Sbjct: 182 DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           ME V  P P  +   +   A  Y +                      L  +P   +  + 
Sbjct: 242 MEVVGTPSPEVLAKISSEHARTYIQ---------------------SLPPMPQKDLSSIF 280
Query: 357 HSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
             A  L IDLL  +L  D  +R+ A EAL H +F++
Sbjct: 281 RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 85/336 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMI------- 137
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE  ++       
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 138 ------------------EIDVLQRLARHDIGG-TRYRSFPIDLVRELGRQLLESVAFMH 178
                             E+ ++  L   D+    + ++   + V+ L  QLL  + ++H
Sbjct: 89  VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + + S ++++DFG     
Sbjct: 149 SAGIIHRDLKPSNV---------------------------AVNEDSELRILDFGLARQA 181
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M 296
            ++ +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF   + ++ L  +
Sbjct: 182 DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           ME V  P P  +   +   A  Y +                      L  +P   +  + 
Sbjct: 242 MEVVGTPSPEVLAKISSEHARTYIQ---------------------SLPPMPQKDLSSIF 280
Query: 357 HSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
             A  L IDLL  +L  D  +R+ A EAL H +F++
Sbjct: 281 RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 130/346 (37%), Gaps = 89/346 (25%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMI----- 137
           T RY  ++++G G +G V +  D      VA+K VR         I+  RE A++     
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 138 --------------------EIDVLQRLARHDIGGTRY------RSFPIDLVRELGRQLL 171
                               EI V       D     Y         P + +++L RQ L
Sbjct: 63  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
             + F+H   ++H DLKPENIL+ S   VK+ D+      S   + F             
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP------------ 170
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
                        VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   
Sbjct: 171 -------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 217
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 350
           + L  +  ++G  P                     DWP D +  R +        R P  
Sbjct: 218 DQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGPRP 253
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
           +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 254 VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 135/332 (40%), Gaps = 83/332 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDI 150
           YR L  +G G +G V    D      VAIK + R      + + A  E+ +L+ +   ++
Sbjct: 27  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 151 GG-------------------------------TRYRSFPIDLVRELGRQLLESVAFMHE 179
            G                                ++     D ++ L  Q+L+ + ++H 
Sbjct: 87  IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA 146
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             +IH DLKP N+                            + +   +K++DFG      
Sbjct: 147 AGIIHRDLKPGNL---------------------------AVNEDCELKILDFGLARQAD 179
Query: 240 QDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
            +    V TR YRAPEVIL  + +    D+WSVGCI+ E+ +G+ LF+  ++L+ L  + 
Sbjct: 180 SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239
Query: 299 RVLGPLPHHMVIRADRRAEKYFRRG-ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
           +V G  P   V R      K + +G   L+  D A+                 I+ +   
Sbjct: 240 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS-----------------ILTNASP 282
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            A   ++LL+ +L  D  +R+ A EAL HP+F
Sbjct: 283 LA---VNLLEKMLVLDAEQRVTAGEALAHPYF 311

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 135/354 (38%), Gaps = 92/354 (25%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-----------SINKYREA 134
           +G   T RY  ++++G G +G V +  D      VA+K VR            I+  RE 
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 135 AMI-------------------------EIDVLQRLARHDIGGTRY------RSFPIDLV 163
           A++                         EI V       D     Y         P + +
Sbjct: 63  ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
           ++L RQ L  + F+H   ++H DLKPENIL+ S   VK+ D+      ++  SY   L  
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL-- 176
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                              + VV T  YRAPEV+L   +  P D+WSVGCI  E+   + 
Sbjct: 177 -------------------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVW 342
           LF  +   + L  +  ++G  P                     DWP D +  R +     
Sbjct: 218 LFCGNSEADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-- 256
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
              R P  +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 257 ---RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 154/370 (41%), Gaps = 87/370 (23%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
           RY I   +G G++G V E +D  +K +VAIK I+R      +   I  EI +L RL  HD
Sbjct: 54  RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHD 112
Query: 150 -------------------------IGGTRYRSF---PIDL----VRELGRQLLESVAFM 177
                                    I  + ++     P+ L    ++ L   LL  V ++
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
           H   ++H DLKP N L+     VKV D+   + +       S     P+   + L+ F  
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLE 292
           T    +  +  V TR YRAPE+IL L  NY    D+WS+GCI  EL     L    EN+ 
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELIL-LQENYTEAIDVWSIGCIFAEL-----LNMIKENVA 286
Query: 293 HLAMMERVLGPL---PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 349
           + A      GPL        +  D++A   F+   R        +RD +  ++ +L  P+
Sbjct: 287 YHADR----GPLFPGSSCFPLSPDQKAGNDFKFHTR-------GNRDQLNVIFNILGTPS 335
Query: 350 L-------------------------IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
                                     + +    S+ D I LL+ +L ++P +R+   E L
Sbjct: 336 EEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECL 395
Query: 385 RHPFFTRDVR 394
            HPFF ++VR
Sbjct: 396 AHPFF-KEVR 404

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 143/365 (39%), Gaps = 88/365 (24%)
Query: 63  GAIPRTGSPPWRPDDKDGHY---VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL 119
           G +PR      R   K G Y   V      L   Y   + +G G +G V    D    E 
Sbjct: 13  GLVPRGSMSLIR---KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEK 69
Query: 120 VAIKI--------VRSINKYREAAMIE----------IDV---------------LQRLA 146
           VAIK         + +   YRE  +++          +DV               +    
Sbjct: 70  VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM 129
Query: 147 RHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 206
           + D+       F  + ++ L  Q+L+ + ++H   ++H DLKP N+              
Sbjct: 130 QTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL-------------- 175
Query: 207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYP 265
                         + +   +K++DFG       + +  V TR YRAPEVIL  + +N  
Sbjct: 176 -------------AVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 266 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 325
            D+WSVGCI+ E+ +G+ LF+  + L+ L  + +V G      V + + +A K +     
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY----- 277
Query: 326 LDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
                          +  L + P     Q    ++    DLL+ +L  D  +RL A +AL
Sbjct: 278 ---------------IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322
Query: 385 RHPFF 389
            HPFF
Sbjct: 323 THPFF 327

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 85/336 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMI------- 137
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE  ++       
Sbjct: 21  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 138 ------------------EIDVLQRLARHDIGG-TRYRSFPIDLVRELGRQLLESVAFMH 178
                             E+ ++  L   D+    + ++   + V+ L  QLL  + ++H
Sbjct: 81  VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              +IH DLKP N+                            + +   ++++DFG     
Sbjct: 141 SAGIIHRDLKPSNV---------------------------AVNEDCELRILDFGLARQA 173
Query: 239 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA-M 296
            ++ +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF   + ++ L  +
Sbjct: 174 DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           ME V  P P  +   +   A  Y +                      L  +P   +  + 
Sbjct: 234 MEVVGTPSPEVLAKISSEHARTYIQ---------------------SLPPMPQKDLSSIF 272
Query: 357 HSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 391
             A  L IDLL  +L  D  +R+ A EAL H +F++
Sbjct: 273 RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 133/346 (38%), Gaps = 89/346 (25%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMI----- 137
           T RY  ++++G G +G V +  D      VA+K VR         I+  RE A++     
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 138 --------------------EIDVLQRLARHDIGGTRY------RSFPIDLVRELGRQLL 171
                               EI V       D     Y         P + +++L RQ L
Sbjct: 63  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
             + F+H   ++H DLKPENIL+ S   VK+ D+      ++  SY   L          
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL---------- 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
                      + VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   
Sbjct: 169 -----------APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 217
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 350
           + L  +  ++G  P                     DWP D +  R +        R P  
Sbjct: 218 DQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGPRP 253
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
           +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 254 VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 83/355 (23%)
Query: 79  DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
           +  Y   IG++   +  RY+ L  +G G  G V   +D   +  VAIK +         +
Sbjct: 8   NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFPIDLVR 164
              YRE  ++++                       DV   +   D   ++     +D  R
Sbjct: 68  KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 165 E--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
              L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP 184
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
                                YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+  G 
Sbjct: 185 ---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 283 ALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSR 335
            LF   ++++    ++E++  P P  M      V        KY        +PD     
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           DS               +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 283 DS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 135/327 (41%), Gaps = 82/327 (25%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-- 152
           + +G G +G V    D    E VAIK + R      + + A  E+ +L+ +   ++ G  
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 153 ------TRYRSF----------PIDLVRELG------------RQLLESVAFMHELRLIH 184
                 +  R+F            DL + +G             Q+L+ + ++H   ++H
Sbjct: 90  DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DLKP N+                            + +   +K++DFG       + + 
Sbjct: 150 RDLKPGNL---------------------------AVNEDCELKILDFGLARHADAEMTG 182
Query: 245 VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
            V TR YRAPEVIL  + +N   D+WSVGCI+ E+ +G+ LF+  + L+ L  + +V G 
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 242
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDL 362
                V + + +A K +                    +  L + P     Q    ++   
Sbjct: 243 PGTEFVQKLNDKAAKSY--------------------IQSLPQTPRKDFTQLFPRASPQA 282
Query: 363 IDLLQGLLRYDPAERLKAREALRHPFF 389
            DLL+ +L  D  +RL A +AL HPFF
Sbjct: 283 ADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 79/332 (23%)
Query: 93  RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--- 147
           +Y  L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L     
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 ---HDIGGTRYRSFPI------DLVRELG---------------RQLLESVAFMHELRLI 183
              +D+  T+ R   +      DL + L                 QLL  +A+ H+ R++
Sbjct: 63  VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKP+N+L+     +K+ D+  L+R+                    FG      + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFG-LARA--------------------FGIPV---RKYT 158
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           + V T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + L  + R+LG
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILG 218
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLIMQHVDHSAG 360
             P+                    +WP+       D    V++ L   +  ++ +D S  
Sbjct: 219 T-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF-LKGLDESG- 257
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
             IDLL  +L+ DP +R+ A++AL H +F  +
Sbjct: 258 --IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 79/332 (23%)
Query: 93  RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--- 147
           +Y  L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L     
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 ---HDIGGTRYRSFPI------DLVRELG---------------RQLLESVAFMHELRLI 183
              +D+  T+ R   +      DL + L                 QLL  +A+ H+ R++
Sbjct: 63  VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKP+N+L+     +K+ D+  L+R+                    FG      + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFG-LARA--------------------FGIPV---RKYT 158
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           + V T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + L  + R+LG
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLIMQHVDHSAG 360
             P+                    +WP+       D    V++ L   +  ++ +D S  
Sbjct: 219 T-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF-LKGLDESG- 257
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
             IDLL  +L+ DP +R+ A++AL H +F  +
Sbjct: 258 --IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 71/337 (21%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDI----GGTRYRSFP-------------IDLVRELGRQLLE-------------SVAF 176
             +I       R  SF               DL R +  Q+L              +V  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           +H   +IH DLKP N+L+ S   +KV D+   + +  S+ D S     P      +++F 
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE----PTGQQSGMVEF- 182
Query: 234 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                       V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +   
Sbjct: 183 ------------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            L ++  ++G  PH                   L   +   +R+ ++++      P   M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               +  G  IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 147/360 (40%), Gaps = 83/360 (23%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----- 125
           R    +  Y   IG++   +  RY+ L  +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 126 ---RSINKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFP 159
               +   YRE  ++++                       DV   +   D   ++     
Sbjct: 63  NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 160 IDLVRE--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           +D  R   L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ 
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTS 179
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
           F   P                     YVV TR+YRAPEVILG+G+    D+WSVGCI+ E
Sbjct: 180 FMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 278 LCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPD 330
           +  G  LF   ++++    ++E++  P P  M      V        KY        +PD
Sbjct: 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 277
Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                DS               +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 278 VLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 112
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 113 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 172
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
           H D+KP+N+LL                           P ++ +KL DFGS         
Sbjct: 173 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 206
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +
Sbjct: 207 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG  P    IR        F+       P            W  +  P         + 
Sbjct: 266 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 304
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
            + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 305 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 347

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 122
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 123 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 182
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
           H D+KP+N+LL                           P ++ +KL DFGS         
Sbjct: 183 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 216
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +
Sbjct: 217 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG  P    IR        F+       P            W  +  P         + 
Sbjct: 276 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 314
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
            + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 315 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 357

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 132/346 (38%), Gaps = 89/346 (25%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMI----- 137
           T RY  ++++G G +G V +  D      VA+K VR         I+  RE A++     
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 138 --------------------EIDVLQRLARHDIGGTRY------RSFPIDLVRELGRQLL 171
                               EI V       D     Y         P + +++L RQ L
Sbjct: 63  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
             + F+H   ++H DLKPENIL+ S   VK+ D+      ++  SY   L          
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL---------- 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
                        VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   
Sbjct: 169 -----------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 217
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 350
           + L  +  ++G  P                     DWP D +  R +        R P  
Sbjct: 218 DQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGPRP 253
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
           +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 254 VQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 79/332 (23%)
Query: 93  RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--- 147
           +Y  L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L     
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 148 ---HDIGGTRYRSFPI------DLVRELG---------------RQLLESVAFMHELRLI 183
              +D+  T+ R   +      DL + L                 QLL  +A+ H+ R++
Sbjct: 63  VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKP+N+L+     +K+ D+  L+R+                    FG      + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFG-LARA--------------------FGIPV---RKYT 158
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           + + T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + L  + R+LG
Sbjct: 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLIMQHVDHSAG 360
             P+                    +WP+       D    V++ L   +  ++ +D S  
Sbjct: 219 T-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF-LKGLDESG- 257
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
             IDLL  +L+ DP +R+ A++AL H +F  +
Sbjct: 258 --IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 120
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 121 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 180
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
           H D+KP+N+LL                           P ++ +KL DFGS         
Sbjct: 181 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 214
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +
Sbjct: 215 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG  P    IR        F+       P            W  +  P         + 
Sbjct: 274 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 312
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
            + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 313 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 355

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 177
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 118
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 178
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
           H D+KP+N+LL                           P ++ +KL DFGS         
Sbjct: 179 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 212
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +
Sbjct: 213 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG  P    IR        F+       P            W  +  P         + 
Sbjct: 272 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 310
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
            + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 311 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 118
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 178
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 179 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 212
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 273 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 311
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 312 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 163
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 164 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 223
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
           H D+KP+N+LL                           P ++ +KL DFGS         
Sbjct: 224 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 257
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +
Sbjct: 258 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG  P    IR        F+       P            W  +  P         + 
Sbjct: 317 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 355
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
            + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 356 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 398

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 88/339 (25%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
           + L  +Y+ L K+GEGT+G V +  D++ + +VA+K +R           A+ EI +L+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGT------------RYRSFPIDLVRELGR---------------QLLESVAFM 177
           L   +I                +     DL + L                 QLL  VA  
Sbjct: 76  LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 234
           H+ R++H DLKP+N+L+ S                 DG          A+KL DFG   +
Sbjct: 136 HQHRILHRDLKPQNLLINS-----------------DG----------ALKLADFGLARA 168
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                + +++ V T  YRAP+V++G   ++   D+WS+GCI  E+ +G+ LF    + + 
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 294 LAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
           L  +  +LG P P     V       ++ F+   +  W                  +P  
Sbjct: 229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS---------------IIPGF 273
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             +         IDLL  +L +DP +R+ AR+A+ HP+F
Sbjct: 274 CQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 88/339 (25%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
           + L  +Y+ L K+GEGT+G V +  D++ + +VA+K +R           A+ EI +L+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGT------------RYRSFPIDLVRELGR---------------QLLESVAFM 177
           L   +I                +     DL + L                 QLL  VA  
Sbjct: 76  LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 234
           H+ R++H DLKP+N+L+ S                 DG          A+KL DFG   +
Sbjct: 136 HQHRILHRDLKPQNLLINS-----------------DG----------ALKLADFGLARA 168
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                + +++ V T  YRAP+V++G   ++   D+WS+GCI  E+ +G+ LF    + + 
Sbjct: 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 294 LAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
           L  +  +LG P P     V       ++ F+   +  W                  +P  
Sbjct: 229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS---------------IIPGF 273
Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             +         IDLL  +L +DP +R+ AR+A+ HP+F
Sbjct: 274 CQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 96
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 97  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 156
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 157 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 190
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 251 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 289
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 290 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 103
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 104 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 163
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 164 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 197
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 258 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 296
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 297 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 338

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 89
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 90  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 149
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
           H D+KP+N+LL                           P ++ +KL DFGS         
Sbjct: 150 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 183
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +
Sbjct: 184 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG  P    IR        F+       P            W  +  P         + 
Sbjct: 243 VLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTP 281
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
            + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 282 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 324

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 96
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 97  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 156
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 157 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 190
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 251 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 289
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 290 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F  +P      
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMVP------ 186
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                            V TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   
Sbjct: 187 ----------------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           ++++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 231 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 286
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 287 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 92
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 93  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 152
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 153 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 186
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 247 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 285
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 286 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 327

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           ++++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 97
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 98  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 157
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 158 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 191
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 251
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 252 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 290
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 291 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 332

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 71/337 (21%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDI----GGTRYRSFP-------------IDLVRELGRQLLE-------------SVAF 176
             +I       R  SF               DL R +  Q+L              +V  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           +H   +IH DLKP N+L+ S   +KV D+   + +  S+ D S                 
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------- 170
Query: 234 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
             T +    +  V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +   
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            L ++  ++G  PH                   L   +   +R+ ++++      P   M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               +  G  IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 85
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 86  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 145
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 146 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 179
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 239
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 240 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 278
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 279 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 320

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           ++++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 71/337 (21%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDI----GGTRYRSFP-------------IDLVRELGRQLLE-------------SVAF 176
             +I       R  SF               DL R +  Q+L              +V  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           +H   +IH DLKP N+L+ S   +KV D+   + +  S+ D S                 
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------- 170
Query: 234 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
             T +    +  V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +   
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            L ++  ++G  PH                   L   +   +R+ ++++      P   M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               +  G  IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 85  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           ++++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 230 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 285
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 85  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 88
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 89  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 148
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 149 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 182
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 243 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 281
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 282 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 323

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 85  SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I   RY    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 85  SGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG      +            R    ++ + A  +       K+ R           +  
Sbjct: 239 LGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR---------PRTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 83/355 (23%)
Query: 79  DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
           +  Y   IG++   +  RY+ L  +G G  G VV  +D   +  VAIK +         +
Sbjct: 8   NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFPIDLVR 164
              YRE  ++++                       DV   +   D   ++     +D  R
Sbjct: 68  KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 165 E--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
              L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP 184
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
                                YVV TR+YRAPEVILG+G+    D+WSVG I+ E+  G 
Sbjct: 185 ---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 283 ALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSR 335
            LF   ++++    ++E++  P P  M      V        KY        +PD     
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           DS               +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 283 DS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   RY    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 85  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 92/344 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I   RY    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 85  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQ 240
           H D+KP+N+LL                           P ++ +KL DFGS         
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 241 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +
Sbjct: 179 NVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           VLG      +            R    ++ + A  +       K+ R           + 
Sbjct: 238 VLGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR---------PRTP 276
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
            + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 277 PEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 97/229 (42%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+     +S +   F   P      
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTP------ 182
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  
Sbjct: 183 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMRAV 341
           ++++    +   LG      +         Y        G   +  +PD     +S R  
Sbjct: 227 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDK 286
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
            K                    DLL  +L  DP +R+   EALRHP+ T
Sbjct: 287 IK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           ++++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           ++++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 222
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 223 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 322
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 323 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P+     
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTPE----- 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                            V TR+YRAPEVILG+G+    D+WSVGCI+ E+  G  LF   
Sbjct: 186 -----------------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           ++++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 285 -----------EHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 132/343 (38%), Gaps = 90/343 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---- 155
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I   RY    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYS 84
Query: 156 --------------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                           ++ P+  V+    QL  S+A++H   + 
Sbjct: 85  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQD 241
           H D+KP+N+LL                           P ++ +KL DFGS       + 
Sbjct: 145 HRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQLVRGEP 178
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L  + +V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG  P    IR        F+       P            W  +  P         +  
Sbjct: 239 LG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP--------RTPP 277
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 403
           + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 183
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 184 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 283
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 284 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 222
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 223 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 322
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 323 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 285
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 285
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 278
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 177
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVSA 197
           D L R  R+     R  + P  L++    QL+ S+  +H   + + H D+KP N+L+  A
Sbjct: 110 DTLHRCCRNYY--RRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA 167
Query: 198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFEHQDHSYVVSTRHYRAP 254
                           DG+          +KL DFGS    +    + +Y+ S R+YRAP
Sbjct: 168 ----------------DGT----------LKLCDFGSAKKLSPSEPNVAYICS-RYYRAP 200
Query: 255 EVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR-- 311
           E+I G   +    D+WSVGCI  E+  GE +F+   +   L  + RVLG  P   V+R  
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG-CPSREVLRKL 259
Query: 312 --ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL 369
             +    + Y  +G  + W                    N+   H    A +  DLL  L
Sbjct: 260 NPSHTDVDLYNSKG--IPW-------------------SNVFSDHSLKDAKEAYDLLSAL 298
Query: 370 LRYDPAERLKAREALRHPFF 389
           L+Y P ER+K  EAL HP+F
Sbjct: 299 LQYLPEERMKPYEALCHPYF 318

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 278
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++                
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA---------------- 176
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
             +F  T +        V TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  
Sbjct: 177 CTNFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMRAV 341
           ++++    +   LG      +         Y        G + +  +PD     +S R  
Sbjct: 229 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDK 288
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
            K                    DLL  +L  DP +R+   EALRHP+ T
Sbjct: 289 IK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 88/338 (26%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
           +Y  L  +GEG++G V++C + +   +VAIK     +     ++ AM EI +L++L RH+
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHE 84
Query: 150 -------IGGTRYRSFPI---------------------DLVRELGRQLLESVAFMHELR 181
                  +   + R + +                      +V++   Q++  + F H   
Sbjct: 85  NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +IH D+KPENIL+  +  VK+ D+ F    +  G  + +                     
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD--------------------- 183
Query: 242 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
               V+TR YRAPE+++G + +    D+W++GC++ E+  GE LF    +++ L  +   
Sbjct: 184 ---EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
Query: 301 LGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-----IMQH 354
           LG L P H         ++ F +                  V+  +RLP +     + + 
Sbjct: 241 LGNLIPRH---------QELFNKN----------------PVFAGVRLPEIKEREPLERR 275
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
               +  +IDL +  L  DP +R    E L H FF  D
Sbjct: 276 YPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 103/335 (30%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               RY I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMH 178
              +I                     GG  +      + F       + +Q+   + +MH
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H DLKPENILL S E                        K   IK+IDFG +T  
Sbjct: 139 KHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCF 174
Query: 239 HQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG   F      + L  
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           +E                   KY       D P   T  D                    
Sbjct: 234 VE-----------------TGKY-----AFDLPQWRTISD-------------------- 251
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
               D  DL++ +L + P+ R+ A + L HP+  +
Sbjct: 252 ----DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 103/335 (30%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               RY I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMH 178
              +I                     GG  +      + F       + +Q+   + +MH
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H DLKPENILL S E                        K   IK+IDFG +T  
Sbjct: 139 KHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCF 174
Query: 239 HQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG   F      + L  
Sbjct: 175 QQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           +E                   KY       D P   T  D                    
Sbjct: 234 VE-----------------TGKY-----AFDLPQWRTISD-------------------- 251
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
               D  DL++ +L + P+ R+ A + L HP+  +
Sbjct: 252 ----DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 138/330 (41%), Gaps = 69/330 (20%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHD 149
           RYR ++K+GEGT+G+V +  D    E VAIK +R  ++       A+ E+ +L+ L   +
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 150 I---GGTRYRSFPIDLVRELGR-----------------------QLLESVAFMHELRLI 183
           I       + +  + L+ E                          QL+  V F H  R +
Sbjct: 95  IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL 154
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKP+N+LL  ++  + P  K        G +   L ++  I +  F          +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKI-------GDF--GLARAFGIPIRQF----------T 195
Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           + + T  YR PE++LG   ++   D+WS+ CI  E+     LF     ++ L  +  VLG
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG 255
Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 362
            LP                      WP G T+    +  +   R   L          + 
Sbjct: 256 -LPDDTT------------------WP-GVTALPDWKQSFPKFRGKTLKRVLGALLDDEG 295
Query: 363 IDLLQGLLRYDPAERLKAREALRHPFFTRD 392
           +DLL  +L  DP +R+ A+ AL HP+F+ +
Sbjct: 296 LDLLTAMLEMDPVKRISAKNALEHPYFSHN 325

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 78/335 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVA------------------IKIVRSINKYREAA 135
           Y+++ K+G G + +V E  +    E VA                  ++ +R        A
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 136 MIEIDVLQR---LARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
            I  D + R   L    +  T ++     L    +R    ++L+++ + H + ++H D+K
Sbjct: 99  DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+L +  E+ K                         ++LID+G   F H  Q+++  V
Sbjct: 159 PHNVL-IDHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRV 192
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 304
           ++R+++ PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG  
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 305 PHH-----MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
             +       I  D R      R +R  W     S +                QH+   +
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VS 294
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
            + +D L  LLRYD   RL AREA+ HP+F   V+
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 145/355 (40%), Gaps = 83/355 (23%)
Query: 79  DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
           +  Y   IG++   +  RY+ L  +G G  G V   +D   +  VAIK +         +
Sbjct: 8   NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEI-----------------------DVLQRLARHDIGGTRYRSFPIDLVR 164
              YRE  ++++                       DV   +   D   ++     +D  R
Sbjct: 68  KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 165 E--LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
              L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA--GTSFMMTP 184
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
                                YVV TR+YRAPEVILG+G+    D+WSVG I+ E+  G 
Sbjct: 185 ---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 283 ALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSR 335
            LF   ++++    ++E++  P P  M      V        KY        +PD     
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           DS               +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 283 DS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 85/349 (24%)
Query: 84  FAIGENLTPRYRILSKMGEGTFG-----------------QVVECFD---NEKKELVAIK 123
           F +  ++   Y I+  +G G +G                 ++   FD   N K+ L  +K
Sbjct: 47  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 124 IVRSINKYREAAMIEI-------------DVLQRLARHDIGGTRYRSFPIDL--VRELGR 168
           I++        A+ +I              V+  L   D+    + S P+ L  VR    
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 166
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSS 225
           QLL  + +MH  ++IH DLKP N+L+     +K+ D+   + L  S  +  YF       
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM------ 220
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL 284
                            +  V+TR YRAPE++L L  +    DLWSVGCI  E+ +   L
Sbjct: 221 -----------------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F     +  L ++  VLG  P   VI+                    A   + +RA  + 
Sbjct: 264 FPGKNYVHQLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAYIQS 302
Query: 345 LRLPNLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           L     +     +   D   + LL  +LR++P+ R+ A  ALRHPF  +
Sbjct: 303 LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 112/337 (33%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 47  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
              +I                     GG       +R R   +D  R + RQ+L  + +M
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 165
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H+ +++H DLKPEN+LL S               SKD +          I++IDFG ST 
Sbjct: 166 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 201
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           FE  +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F          
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 250
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
                                             +GA   D ++ V K      LP    
Sbjct: 251 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 274
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           + V  SA DLI   + +L Y P+ R+ AR+AL H + 
Sbjct: 275 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 308

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 112/337 (33%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 48  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
              +I                     GG       +R R   +D  R + RQ+L  + +M
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 166
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H+ +++H DLKPEN+LL S               SKD +          I++IDFG ST 
Sbjct: 167 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 202
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           FE  +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F          
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 251
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
                                             +GA   D ++ V K      LP    
Sbjct: 252 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 275
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           + V  SA DLI   + +L Y P+ R+ AR+AL H + 
Sbjct: 276 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 309

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 57/224 (25%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLA 146
              RY I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L 
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 147 RHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMHE 179
             +I                     GG  +      + F       + +Q+   + +MH+
Sbjct: 80  HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             ++H DLKPENILL S E                        K   IK+IDFG +T   
Sbjct: 140 HNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGLSTCFQ 175
Query: 240 QDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 189
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    DLWSVGCI+ E+   + LF   
Sbjct: 190 ---------------YVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 234 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 289
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 290 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 142/336 (42%), Gaps = 112/336 (33%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 30  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
              +I                     GG       +R R   +D  R + RQ+L  + +M
Sbjct: 90  DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 148
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H+ +++H DLKPEN+LL S               SKD +          I++IDFG ST 
Sbjct: 149 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 184
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           FE  +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F          
Sbjct: 185 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 233
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
                                             +GA   D ++ V K      LP    
Sbjct: 234 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 257
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
           + V  SA DLI   + +L Y P+ R+ AR+AL H +
Sbjct: 258 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEW 290

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                          YVV TR+YRAPEVILG+G+    DLWSVGCI+ E+   + LF   
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 222
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 278
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 112/337 (33%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
              +I                     GG       +R R   +D  R + RQ+L  + +M
Sbjct: 84  DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYM 142
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H+ +++H DLKPEN+LL S               SKD +          I++IDFG ST 
Sbjct: 143 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 178
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           FE  +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F          
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 227
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
                                             +GA   D ++ V K      LP    
Sbjct: 228 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 251
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           + V  SA DLI   + +L Y P+ R+ AR+AL H + 
Sbjct: 252 KKVSESAKDLI---RKMLTYVPSMRISARDALDHEWI 285

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 85/349 (24%)
Query: 84  FAIGENLTPRYRILSKMGEGTFG-----------------QVVECFD---NEKKELVAIK 123
           F +  ++   Y I+  +G G +G                 ++   FD   N K+ L  +K
Sbjct: 46  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 124 IVRSINKYREAAMIEI-------------DVLQRLARHDIGGTRYRSFPIDL--VRELGR 168
           I++        A+ +I              V+  L   D+    + S P+ L  VR    
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 165
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSS 225
           QLL  + +MH  ++IH DLKP N+L+     +K+ D+   + L  S  +  YF       
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM------ 219
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL 284
                            +  V+TR YRAPE++L L  +    DLWSVGCI  E+ +   L
Sbjct: 220 -----------------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F     +  L ++  VLG  P   VI+                    A   + +RA  + 
Sbjct: 263 FPGKNYVHQLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAYIQS 301
Query: 345 LRLPNLIMQHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           L     +     +   D   + LL  +LR++P+ R+ A  ALRHPF  +
Sbjct: 302 LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P+     
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMEPE----- 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                            V TR+YRAPEVILG+G+    DLWSVGCI+ E+   + LF   
Sbjct: 186 -----------------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
           +
Sbjct: 329 K 329

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
           +
Sbjct: 329 K 329

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 168
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 169 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 224
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 225 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 284
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 285 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326
Query: 394 R 394
           +
Sbjct: 327 K 327

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGP-----LPHHMVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG            I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
           +
Sbjct: 329 K 329

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 169
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 170 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 226 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 286 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327
Query: 394 R 394
           +
Sbjct: 328 K 328

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
           +
Sbjct: 329 K 329

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 169
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 170 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 226 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 286 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327
Query: 394 R 394
           +
Sbjct: 328 K 328

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 53/230 (23%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           ++L+++ + H + ++H D+KP N++ +  E+ K                         ++
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK-------------------------LR 172
Query: 229 LIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEAL 284
           LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  +    E  
Sbjct: 173 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Query: 285 FQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           F  H+N + L  + +VLG    +       I  D R      R +R  W     S +   
Sbjct: 233 FHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN--- 289
Query: 340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                        QH+   + + +D L  LLRYD   RL AREA+ HP+F
Sbjct: 290 -------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
           +
Sbjct: 329 K 329

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
           +
Sbjct: 329 K 329

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 175
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 176 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 231
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 232 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 291
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 292 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 333
Query: 394 R 394
           +
Sbjct: 334 K 334

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 53/241 (21%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F   V
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
Query: 394 R 394
           +
Sbjct: 329 K 329

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 53/236 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    ++L+++ + H + ++H D+KP N++ +  E+ K                     
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRK--------------------- 170
Query: 223 KSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
               ++LID+G   F H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  + 
Sbjct: 171 ----LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
Query: 280 -SGEALFQTHENLEHLAMMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGAT 333
              E  F  H+N + L  + +VLG    +       I  D R      R +R  W     
Sbjct: 227 FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           S +                QH+   + + +D L  LLRYD   RL AREA+ HP+F
Sbjct: 287 SEN----------------QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 83/333 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLAR-- 147
           +Y  L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L    
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 148 ----HDIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHELRL 182
               HD+  +  +                         ++V+    QLL+ + F H   +
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
           +H DLKP+N+L                           + ++  +KL +FG   +     
Sbjct: 123 LHRDLKPQNLL---------------------------INRNGELKLANFGLARAFGIPV 155
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMM 297
           + +S  V T  YR P+V+ G   ++   D+WS GCI  EL  +G  LF  ++  + L  +
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 215
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R+LG                         WP      D     + +      ++  V  
Sbjct: 216 FRLLG-------------------TPTEEQWPSMTKLPDY--KPYPMYPATTSLVNVVPK 254
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                 DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 47/229 (20%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P+     
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMEPE----- 185
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                            V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 186 -----------------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
Query: 289 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADS---- 284
Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 135/333 (40%), Gaps = 83/333 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLAR-- 147
           +Y  L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L    
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 148 ----HDIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHELRL 182
               HD+  +  +                         ++V+    QLL+ + F H   +
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
           +H DLKP+N+L                           + ++  +KL DFG   +     
Sbjct: 123 LHRDLKPQNLL---------------------------INRNGELKLADFGLARAFGIPV 155
Query: 240 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMM 297
           + +S  V T  YR P+V+ G   ++   D+WS GCI  EL  +   LF  ++  + L  +
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRI 215
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R+LG                         WP      D     + +      ++  V  
Sbjct: 216 FRLLG-------------------TPTEEQWPSMTKLPDY--KPYPMYPATTSLVNVVPK 254
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                 DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 74/326 (22%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRLAR---- 147
           Y  L K+GEGT+  V +        LVA+K +R  ++      A+ E+ +L+ L      
Sbjct: 4   YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 148 --HDIGGTR------YRSFPIDL---------------VRELGRQLLESVAFMHELRLIH 184
             HDI  T       +     DL               V+    QLL  +A+ H  +++H
Sbjct: 64  TLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DLKP+N+L+     +K+ D+  L+R+       K++P           + T++++    
Sbjct: 124 RDLKPQNLLINERGELKLADFG-LARA-------KSIP-----------TKTYDNE---- 160
Query: 245 VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
            V T  YR P+++LG   ++   D+W VGCI  E+ +G  LF      E L  + R+LG 
Sbjct: 161 -VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGT 219
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
                                   WP G  S +  +           ++ H      D  
Sbjct: 220 PTEET-------------------WP-GILSNEEFKTYNYPKYRAEALLSHAPRLDSDGA 259
Query: 364 DLLQGLLRYDPAERLKAREALRHPFF 389
           DLL  LL+++   R+ A +A++HPFF
Sbjct: 260 DLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L    
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
                                         HD+ G        F +  ++ + + LL  +
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
            ++H  +++H D+K  N+L+                 ++DG           +KL DFG 
Sbjct: 139 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 171
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
               S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q
Sbjct: 172 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
            +     LA++ ++ G +   +    D      +    +L+   G     +D ++A  + 
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 285
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                      D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 286 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 140/337 (41%), Gaps = 112/337 (33%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFM 177
              +I                     GG       +R R   +D  R + RQ+L  + + 
Sbjct: 84  DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII-RQVLSGITYX 142
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
           H+ +++H DLKPEN+LL S               SKD +          I++IDFG ST 
Sbjct: 143 HKNKIVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTH 178
Query: 237 FE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           FE  +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F          
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF---------- 227
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIM 352
                                             +GA   D ++ V K      LP    
Sbjct: 228 ----------------------------------NGANEYDILKKVEKGKYTFELPQ--W 251
Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           + V  SA DLI   +  L Y P+ R+ AR+AL H + 
Sbjct: 252 KKVSESAKDLI---RKXLTYVPSXRISARDALDHEWI 285

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L    
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
                                         HD+ G        F +  ++ + + LL  +
Sbjct: 78  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
            ++H  +++H D+K  N+L+                 ++DG           +KL DFG 
Sbjct: 138 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 170
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
               S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q
Sbjct: 171 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
            +     LA++ ++ G +   +    D      +    +L+   G     +D ++A  + 
Sbjct: 231 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 284
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                      D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 285 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 318

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L    
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
                                         HD+ G        F +  ++ + + LL  +
Sbjct: 79  VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
            ++H  +++H D+K  N+L+                 ++DG           +KL DFG 
Sbjct: 139 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 171
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
               S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q
Sbjct: 172 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
            +     LA++ ++ G +   +    D      +    +L+   G     +D ++A  + 
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 285
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                      D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 286 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 95/348 (27%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRL---- 145
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L    
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 146 ----------------------------ARHDIGGTRYR---SFPIDLVRELGRQLLESV 174
                                         HD+ G        F +  ++ + + LL  +
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
            ++H  +++H D+K  N+L+                 ++DG           +KL DFG 
Sbjct: 139 YYIHRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGL 171
Query: 234 ----STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 286
               S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q
Sbjct: 172 ARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKL 344
            +     LA++ ++ G +   +    D      +    +L+   G     +D ++A  + 
Sbjct: 232 GNTEQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR- 285
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                      D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 286 -----------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 159/362 (43%), Gaps = 71/362 (19%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARH- 148
            Y I   +G G++G V   +D   ++ VAIK V R      +   I  EI +L RL    
Sbjct: 27  NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 149 -----------------------DIGGTRYRSF---PIDLVRELGRQLLESV----AFMH 178
                                  +I  +  +     PI L  E  + +L ++     F+H
Sbjct: 87  IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKLIDFGST 235
           E  +IH DLKP N LL     VKV D+  L+R   S KD +   +L ++         + 
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFG-LARTINSEKDTNIVNDLEENEEPGP---HNK 202
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEH 293
             + Q  S+VV TR YRAPE+IL L  NY    D+WS GCI  EL +   + Q+H N   
Sbjct: 203 NLKKQLTSHVV-TRWYRAPELIL-LQENYTKSIDIWSTGCIFAELLN---MLQSHIN--- 254
Query: 294 LAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPD------GATSRDSMR-----AV 341
                R  L P      +  DR ++K   +  R D  +      G  + D ++      V
Sbjct: 255 -DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNR-DQLNIIFNIIGTPTEDDLKNINKPEV 312
Query: 342 WKLLRL-----PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            K ++L     P  + Q     + D I+LL+ +L+++P +R+   +AL HP+  +DVR+ 
Sbjct: 313 IKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL-KDVRKK 371
Query: 397 TL 398
            L
Sbjct: 372 KL 373

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 144/343 (41%), Gaps = 105/343 (30%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI 137
           G ++ +   +L+  Y+ + K+G G +G+V+ C D       AIKI+R  S++    + ++
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 138 E-IDVLQRLARHDI---------------------GGT-------RYRSFPIDLVRELGR 168
           E + VL+ L   +I                     GG        R +   +D    + +
Sbjct: 85  EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-IIK 143
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  V ++H+  ++H DLKPEN+LL S E                        K + IK
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKE------------------------KDALIK 179
Query: 229 LIDFG-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
           ++DFG S  FE+Q      + T +Y APEV L   ++  CD+WS+G IL  L +G   F 
Sbjct: 180 IVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFG 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
              + E L                   R+ EK            G  + DS    WK   
Sbjct: 239 GQTDQEIL-------------------RKVEK------------GKYTFDSPE--WK--- 262
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                  +V   A DLI   + +L++D   R+ A++AL HP+ 
Sbjct: 263 -------NVSEGAKDLI---KQMLQFDSQRRISAQQALEHPWI 295

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 54  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 113
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 114 DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 173
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 174 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 207
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLG-- 302
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 208 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 267
Query: 303 ---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 268 GLNAYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 309
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 310 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKE-------------------------LVAIKIVRSI 128
           Y ++ K+G G + +V E  +    E                         +    IV+ +
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 93  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 93  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 34  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 93
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 94  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 34  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 93
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 94  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 35  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 94
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 95  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 154
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 155 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 188
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 189 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 248
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 249 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 290
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 291 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 93  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 93  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 93  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 78/332 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAI-------------------------KIVRSI 128
           Y ++ K+G G + +V E  +    E   I                          IV+ +
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 129 NKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
           +  R+       ++     +      Y +     +R    +LL+++ + H   ++H D+K
Sbjct: 93  DIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 247 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 303
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 304 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 125/309 (40%), Gaps = 92/309 (29%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEI---------------DV 141
           +GEG+F    +C   +  +  A+KI+      N  +E   +++               D 
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 142 LQRLARHDI--GGTRY------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL 193
           L      ++  GG  +      + F       + R+L+ +V+ MH++ ++H DLKPEN+L
Sbjct: 79  LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138
Query: 194 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS---TRH 250
                                   F +   +  IK+IDFG    +  D+  + +   T H
Sbjct: 139 ------------------------FTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH 174
Query: 251 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVI 310
           Y APE++   G++  CDLWS+G IL  + SG+  FQ+H         +R L       ++
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH---------DRSLTCTSAVEIM 225
Query: 311 RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL 370
           +  ++ +  F   A                 WK          +V   A DLI   QGLL
Sbjct: 226 KKIKKGDFSFEGEA-----------------WK----------NVSQEAKDLI---QGLL 255
Query: 371 RYDPAERLK 379
             DP +RLK
Sbjct: 256 TVDPNKRLK 264

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 47/250 (18%)
Query: 157 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
             P  +V+ L  Q+L+ + ++H   ++H DLKP NIL++                     
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG------------------ 165
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLW 269
                P+   +K+ D G     +       D   VV T  YRAPE++LG   +    D+W
Sbjct: 166 -----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 270 SVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG 323
           ++GCI  EL + E +F   +      N  H   ++R+       M   AD+  E   +  
Sbjct: 221 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV----MGFPADKDWEDIKKM- 275
Query: 324 ARLDWPDGAT-SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 382
                P+ +T  +D  R  +    L   + +H          LLQ LL  DP +R+ + +
Sbjct: 276 -----PEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330
Query: 383 ALRHPFFTRD 392
           A++ P+F  D
Sbjct: 331 AMQDPYFLED 340

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 70/326 (21%)
Query: 94  YRILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAAMIE-----------I 139
           Y+++ K+G G + +V E     +NE+  +  +K V+     RE  ++E           I
Sbjct: 40  YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLI 99
Query: 140 DVLQ-------RLARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
           D ++        L    I  T ++     L    +R    +LL+++ + H   ++H D+K
Sbjct: 100 DTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVK 159
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++                            +   ++LID+G   F H  Q+++  V
Sbjct: 160 PHNVMIDH--------------------------QQKKLRLIDWGLAEFYHPAQEYNVRV 193
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 304
           ++R+++ PE+++    ++Y  D+WS+GC+L  +    E  F   +N + L  + +VLG  
Sbjct: 194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 253
Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLI 363
             +  ++         +    LD           R  W+     N I     H    + +
Sbjct: 254 ELYGYLK---------KYHIDLDPHFNDILGQHSRKRWE-----NFIHSENRHLVSPEAL 299
Query: 364 DLLQGLLRYDPAERLKAREALRHPFF 389
           DLL  LLRYD  +RL A+EA+ HP+F
Sbjct: 300 DLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 70/326 (21%)
Query: 94  YRILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAAMIE-----------I 139
           Y+++ K+G G + +V E     +NE+  +  +K V+     RE  ++E           I
Sbjct: 45  YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLI 104
Query: 140 DVLQ-------RLARHDIGGTRYRSFPIDL----VRELGRQLLESVAFMHELRLIHTDLK 188
           D ++        L    I  T ++     L    +R    +LL+++ + H   ++H D+K
Sbjct: 105 DTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVK 164
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 246
           P N+++                            +   ++LID+G   F H  Q+++  V
Sbjct: 165 PHNVMIDH--------------------------QQKKLRLIDWGLAEFYHPAQEYNVRV 198
Query: 247 STRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPL 304
           ++R+++ PE+++    ++Y  D+WS+GC+L  +    E  F   +N + L  + +VLG  
Sbjct: 199 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 258
Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLI 363
             +  ++         +    LD           R  W+     N I     H    + +
Sbjct: 259 ELYGYLK---------KYHIDLDPHFNDILGQHSRKRWE-----NFIHSENRHLVSPEAL 304
Query: 364 DLLQGLLRYDPAERLKAREALRHPFF 389
           DLL  LLRYD  +RL A+EA+ HP+F
Sbjct: 305 DLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 146/374 (39%), Gaps = 92/374 (24%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARHD 149
            Y I   +G G++G V   +D    + VAIK V R      +   I  EI +L RL    
Sbjct: 29  NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 150 IGGTRYRSFPIDL-------------------------------VRELGRQLLESVAFMH 178
           I        P DL                               V+ +   LL    F+H
Sbjct: 89  IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKLIDFGST 235
           E  +IH DLKP N LL     VK+ D+  L+R   S KD     +L +    +     + 
Sbjct: 149 ESGIIHRDLKPANCLLNQDCSVKICDFG-LARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCS------------- 280
             + Q  S+VV TR YRAPE+IL L  NY    D+WS GCI  EL +             
Sbjct: 208 NLKKQLTSHVV-TRWYRAPELIL-LQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRF 265
Query: 281 ----GEALF---------QTHE--NLEHLAMMERVLGPLPHH-MVIRADRRAEKYFRRGA 324
               G + F         + HE  N + L ++  V+G  P   +     +   KY +   
Sbjct: 266 PLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFP 325
Query: 325 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
             D  D +    S+                    + + IDLL+ +LR++  +R+   +AL
Sbjct: 326 TRDGIDLSKKYSSI--------------------SKEGIDLLESMLRFNAQKRITIDKAL 365
Query: 385 RHPFFTRDVRRPTL 398
            HP+  +DVR+  L
Sbjct: 366 SHPYL-KDVRKENL 378

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 131/337 (38%), Gaps = 104/337 (30%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
           + L+ RY+ + K+G G +G+V+ C D       AIKI++    +      A + E+ VL+
Sbjct: 17  QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 144 RLARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAF 176
           +L   +I                     GG  +      + F       + +Q+L    +
Sbjct: 77  QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 235
           +H+  ++H DLKPEN+LL S               S+D          + IK++DFG S 
Sbjct: 137 LHKHNIVHRDLKPENLLLES--------------KSRD----------ALIKIVDFGLSA 172
Query: 236 TFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
            FE        + T +Y APEV L   ++  CD+WS G IL  L  G   F    + E L
Sbjct: 173 HFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL 231
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
             +E+  G                        D PD     D  + + KL          
Sbjct: 232 KRVEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL---------- 259
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                         +L Y+P++R+ A EAL HP+  +
Sbjct: 260 --------------MLTYEPSKRISAEEALNHPWIVK 282

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 63/336 (18%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRL 145
           G +L  RY  L  +G G  G V    DN+  + VAIK IV +  +  + A+ EI +++RL
Sbjct: 6   GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 146 ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH-------TDLKPENILL---V 195
              +I          +++   G QL + V  + EL  ++       TDL   N+L    +
Sbjct: 66  DHDNIVKV------FEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA--NVLEQGPL 117
Query: 196 SAEYVKVPDYKFL------------SRSSKDGSYFKNLPKSSAIKLIDFG-----STTFE 238
             E+ ++  Y+ L             R  K  + F N  +   +K+ DFG        + 
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN-TEDLVLKIGDFGLARIMDPHYS 176
Query: 239 HQDH-SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           H+ H S  + T+ YR+P ++L    +    D+W+ GCI  E+ +G+ LF     LE    
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--- 233
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR--LPNLIMQH 354
           M+ +L  +P   V+  + R E        +        R+ M    K L   LP +    
Sbjct: 234 MQLILESIP---VVHEEDRQELLSVIPVYI--------RNDMTEPHKPLTQLLPGI---- 278
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
               + + +D L+ +L + P +RL A EAL HP+ +
Sbjct: 279 ----SREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 134/354 (37%), Gaps = 111/354 (31%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRL 145
           L+ RY+ + K+G G +G+V+ C D       AIKI++    +      A + E+ VL++L
Sbjct: 2   LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 146 ARHDI---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMH 178
              +I                     GG  +      + F       + +Q+L    ++H
Sbjct: 62  DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 237
           +  ++H DLKPEN+LL S                          + + IK++DFG S  F
Sbjct: 122 KHNIVHRDLKPENLLLESK------------------------SRDALIKIVDFGLSAHF 157
Query: 238 E-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           E        + T +Y APEV L   ++  CD+WS G IL  L  G   F    + E L  
Sbjct: 158 EVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR 216
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           +E+  G                        D PD     D  + + KL            
Sbjct: 217 VEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL------------ 242
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR-------DVRRPTLLVATG 403
                       +L Y+P++R+ A EAL HP+  +       DV +  L  A G
Sbjct: 243 ------------MLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALG 284

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 49/264 (18%)
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRSFPI---DLVRELGRQLLESVAFMHELRLIHTDL 187
           + E AM ++ ++  L R D+    +    +     ++     +L  +  +HE  ++H DL
Sbjct: 101 FEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDL 160
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
            P NILL     + + D+      + D                          + ++ V+
Sbjct: 161 HPGNILLADNNDITICDFNLAREDTADA-------------------------NKTHYVT 195
Query: 248 TRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLP 305
            R YRAPE+++   G+    D+WS GC++ E+ + +ALF+       L  +  V+G P  
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
             +V+ +   A  Y R          + S    RA W        ++   D  A   +DL
Sbjct: 256 EDVVMFSSPSARDYLR---------NSLSNVPARA-W------TAVVPTADPVA---LDL 296
Query: 366 LQGLLRYDPAERLKAREALRHPFF 389
           +  +L ++P  R+   +ALRHP+F
Sbjct: 297 IAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 49/264 (18%)
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRSFPI---DLVRELGRQLLESVAFMHELRLIHTDL 187
           + E AM ++ ++  L R D+    +    +     ++     +L  +  +HE  ++H DL
Sbjct: 101 FEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDL 160
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
            P NILL     + + D+      + D                          + ++ V+
Sbjct: 161 HPGNILLADNNDITICDFNLAREDTADA-------------------------NKTHYVT 195
Query: 248 TRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLP 305
            R YRAPE+++   G+    D+WS GC++ E+ + +ALF+       L  +  V+G P  
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 306 HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 365
             +V+ +   A  Y R          + S    RA W        ++   D  A   +DL
Sbjct: 256 EDVVMFSSPSARDYLR---------NSLSNVPARA-W------TAVVPTADPVA---LDL 296
Query: 366 LQGLLRYDPAERLKAREALRHPFF 389
           +  +L ++P  R+   +ALRHP+F
Sbjct: 297 IAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 53/217 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-------- 145
           + +L K+GEG++G V +    E  ++VAIK V   +  +E  + EI ++Q+         
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI-IKEISIMQQCDSPHVVKY 89
Query: 146 --------------------ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
                               +  DI   R ++   D +  + +  L+ + ++H +R IH 
Sbjct: 90  YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR 149
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           D+K  NILL +  + K+ D+                           G  T      + V
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXMAKRNXV 185
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
           + T  + APEVI  +G+N   D+WS+G   +E+  G+
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 123/333 (36%), Gaps = 108/333 (32%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLAR--- 147
           Y IL ++G G FG V  C +     +   K + +   ++KY      EI ++ +L     
Sbjct: 53  YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHPKL 110
Query: 148 ---HD-----------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELR 181
              HD                       I    Y+    +++  + RQ  E +  MHE  
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKHMHEHS 169
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H D+KPENI+  +                          K+S++K+IDFG  T  + D
Sbjct: 170 IVHLDIKPENIMCETK-------------------------KASSVKIIDFGLATKLNPD 204
Query: 242 H--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                  +T  + APE++      +  D+W++G +   L SG + F   ++LE L  ++R
Sbjct: 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR 264
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                                      DW       D+  +V                 +
Sbjct: 265 C--------------------------DW---EFDEDAFSSV-----------------S 278
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
            +  D ++ LL+ +P +RL   +AL HP+   D
Sbjct: 279 PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 123/338 (36%), Gaps = 115/338 (34%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------REAAMIEI-- 139
           Y +   +G+G F  V  C + E  +  A+KIV  + K+            REA++  +  
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 140 --DVLQRLARHDIGGTRYRSFPI----DLVREL------------------GRQLLESVA 175
              +++ L  +   G  Y  F      DL  E+                   RQ+LE++ 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           + H+  +IH D+KPEN+LL S E                         S+ +KL DFG  
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKE------------------------NSAPVKLGDFG-V 179
Query: 236 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
             +  +   V    V T H+ APEV+    +  P D+W  G IL  L S           
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 228
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
                     G LP +                       G   R     +    ++    
Sbjct: 229 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 255
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             H+  SA DL+   + +L  DPAER+   EAL HP+ 
Sbjct: 256 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 129/334 (38%), Gaps = 103/334 (30%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L+  + + S++G G    V  C     ++  A+K+++     ++    EI VL RL+ 
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSH 107
Query: 148 HDIGGTRY---RSFPIDLVRELG------------------------RQLLESVAFMHEL 180
            +I   +        I LV EL                         +Q+LE+VA++HE 
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
            ++H DLKPEN+L  +      PD                    + +K+ DFG S   EH
Sbjct: 168 GIVHRDLKPENLLYATP----APD--------------------APLKIADFGLSKIVEH 203
Query: 240 QD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMM 297
           Q     V  T  Y APE++ G  +    D+WSVG I  + LC  E  +            
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY------------ 251
Query: 298 ERVLGPLPHHMVIRADRRAEKY-FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                          D R +++ FRR    ++                      I    D
Sbjct: 252 ---------------DERGDQFMFRRILNCEY--------------------YFISPWWD 276
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             + +  DL++ L+  DP +RL   +AL+HP+ T
Sbjct: 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 11  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 65
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 66  QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 126 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 157
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D + V     V T +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 218 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 244
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 245 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 289
Query: 403 GET 405
           G T
Sbjct: 290 GTT 292

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 58  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 173 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 204
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D + V     V T +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 265 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 291
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 292 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 336
Query: 403 GET 405
           G T
Sbjct: 337 GTT 339

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 58  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 173 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 204
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D + V     V T +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 265 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 291
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 292 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 336
Query: 403 GET 405
           G T
Sbjct: 337 GTT 339

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 121/307 (39%), Gaps = 70/307 (22%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------------- 126
           G YV      +   Y  + K+G G +G+V+ C +       AIK+++             
Sbjct: 24  GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 127 -SINKYREAAMIEIDVLQRLARHDI---------------------GG-------TRYRS 157
            +I K+ E    EI +L+ L   +I                     GG        R++ 
Sbjct: 84  KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
              D    + +Q+L  + ++H+  ++H D+KPENILL                       
Sbjct: 144 DECDAAN-IMKQILSGICYLHKHNIVHRDIKPENILL----------------------- 179
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 275
            +N      IK++DFG ++F  +D+     + T +Y APEV L   +N  CD+WS G I+
Sbjct: 180 -ENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIM 237
Query: 276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 335
             L  G   F    + + +  +E+       +        A++  +     D+    T+ 
Sbjct: 238 YILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAE 297
Query: 336 DSMRAVW 342
           +++ + W
Sbjct: 298 EALNSRW 304

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 14  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 68
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 69  QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 128
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 129 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 160
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D + V     V T +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 161 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 221 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 247
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 248 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 292
Query: 403 GET 405
           G T
Sbjct: 293 GTT 295

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 66/221 (29%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-----EAAMIEIDVLQRLARHDI--- 150
           K+G G FG V      E++     +++++INK R     E    EI+VL+ L   +I   
Sbjct: 29  KLGSGAFGDVHLV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 151 ------------------GG----------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                             GG           R ++     V EL +Q++ ++A+ H   +
Sbjct: 86  FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 241
           +H DLKPENIL                        F++    S IK+IDFG +  F+  +
Sbjct: 146 VHKDLKPENIL------------------------FQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 242 HSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           HS     T  Y APEV       + CD+WS G ++  L +G
Sbjct: 182 HSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 30  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 85  QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 145 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 176
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D + V     V T +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 237 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 263
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 264 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 308
Query: 403 GET 405
           G T
Sbjct: 309 GTT 311

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
               I   +  + +    +V EL                          Q+L +V ++HE
Sbjct: 73  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
             +IH DLKPEN+LL S E                        +   IK+ DFG +    
Sbjct: 133 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 168
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  H      
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 224
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
                        + ++    + KY                + +  VW            
Sbjct: 225 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 246
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
           V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 247 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 52/214 (24%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L ++G+G+FG+V +  DN  KE+VAIKI+         E    EI VL +     I    
Sbjct: 24  LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 152 GTRYRSFPIDLVRE-LG----------------------RQLLESVAFMHELRLIHTDLK 188
           G+  +S  + ++ E LG                      R++L+ + ++H  R IH D+K
Sbjct: 84  GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+LL     VK+ D+                           G  T      +  V T
Sbjct: 144 AANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKRNXFVGT 179
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
             + APEVI    +++  D+WS+G   +EL  GE
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 130/360 (36%), Gaps = 116/360 (32%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA- 134
           G ++    + L   Y +   +G G  G+V   F+ +  + VAIKI+     +I   REA 
Sbjct: 4   GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 135 ----AMIEIDVLQRLAR-----------------------------HDIGGTRYRSFPID 161
                  EI++L++L                                 +G  R +     
Sbjct: 64  PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK 123
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           L      Q+L +V ++HE  +IH DLKPEN+LL S E                       
Sbjct: 124 LYF---YQMLLAVQYLHENGIIHRDLKPENVLLSSQE----------------------- 157
Query: 222 PKSSAIKLIDFGSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILV 276
            +   IK+ DFG +    E      +  T  Y APEV++ +   G+N   D WS+G IL 
Sbjct: 158 -EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
Query: 277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 336
              SG   F  H                   + ++    + KY                +
Sbjct: 217 ICLSGYPPFSEHRT----------------QVSLKDQITSGKY----------------N 244
Query: 337 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
            +  VW            V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 245 FIPEVW----------AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 291

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
               I   +  + +    +V EL                          Q+L +V ++HE
Sbjct: 73  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
             +IH DLKPEN+LL S E                        +   IK+ DFG +    
Sbjct: 133 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 168
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  H      
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 224
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
                        + ++    + KY                + +  VW            
Sbjct: 225 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 246
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
           V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 247 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
               I   +  + +    +V EL                          Q+L +V ++HE
Sbjct: 73  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
             +IH DLKPEN+LL S E                        +   IK+ DFG +    
Sbjct: 133 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 168
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  H      
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 224
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
                        + ++    + KY                + +  VW            
Sbjct: 225 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 246
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
           V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 247 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 61/236 (25%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDV 141
           +G N    +RI  K+G G F +V           VA+K V+  +    K R   + EID+
Sbjct: 26  MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 142 LQRLARHDIGGTRYRSF----PIDLVRELGR----------------------------Q 169
           L++L   ++    Y SF     +++V EL                              Q
Sbjct: 86  LKQLNHPNVI-KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           L  ++  MH  R++H D+KP N+ + +   VK+ D          G +F +         
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS--------- 188
Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
                TT  H     +V T +Y +PE I   G+N+  D+WS+GC+L E+ + ++ F
Sbjct: 189 ----KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 130/342 (38%), Gaps = 111/342 (32%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 12  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 71
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
               I   +  + +    +V EL                          Q+L +V ++HE
Sbjct: 72  NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
             +IH DLKPEN+LL S E                        +   IK+ DFG +    
Sbjct: 132 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 167
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  H      
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 223
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
                        + ++    + KY                + +  VW            
Sbjct: 224 ------------QVSLKDQITSGKY----------------NFIPEVW----------AE 245
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
           V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 246 VSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 284

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 133/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 30  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 85  QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 145 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 176
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D   V     V T +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 177 QPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 237 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 263
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 264 ----IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 308
Query: 403 GET 405
           G T
Sbjct: 309 GTT 311

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 134/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 10  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 64
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 65  QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 124
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 125 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 156
Query: 239 HQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D + V     V T +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 157 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 217 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 243
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 244 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 288
Query: 403 GET 405
           G T
Sbjct: 289 GTT 291

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 133/363 (36%), Gaps = 132/363 (36%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 58  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRYRSFPID-----LVRELG-----------------------RQLLESVAFMH 178
           +H     R   + I      +V E G                       + +LE+V  +H
Sbjct: 113 QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  ++H+DLKP N L+V                  DG           +KLIDFG     
Sbjct: 173 QHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIANQM 204
Query: 239 HQDHSYVVSTR-----HYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 282
             D + VV        +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
             FQ  + +  ++ +  ++ P                      +++PD            
Sbjct: 265 TPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD------------ 291
Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT 402
               +P            DL D+L+  L+ DP +R+   E L HP+       P   +A 
Sbjct: 292 ----IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQMAK 336
Query: 403 GET 405
           G T
Sbjct: 337 GTT 339

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 126/338 (37%), Gaps = 101/338 (29%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
           +   +I         GG  Y    +       D + E G            Q+L++V ++
Sbjct: 73  IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+L ++H DLKPEN+L                        + +L + S I + DFG +  
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           E      S    T  Y APEV+    ++   D WS+G I   L  G   F    + +   
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--- 225
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           + E++L             +AE  F      D  D A                       
Sbjct: 226 LFEQIL-------------KAEYEFDSPYWDDISDSAK---------------------- 250
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
                   D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 --------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 63/290 (21%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
           H+V A  E   P  + +L  +G+G+FG+V    +    +   L A+K+++      + R 
Sbjct: 16  HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 134 AAMIEIDVLQRLAR------HDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
              +E D+L  +        H    T  + + I       DL   L ++++   E V F 
Sbjct: 76  RTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 135
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
                     +H L +I+ DLKPENILL    ++K+ D+  LS+ + D            
Sbjct: 136 LAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKEAID------------ 182
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
                       H+  +Y    T  Y APEV+   G ++  D WS G ++ E+ +G   F
Sbjct: 183 ------------HEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL-DWPDGA 332
           Q  +  E + ++ +    +P  +   A       F+R    RL   PDGA
Sbjct: 231 QGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGA 280

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 130/350 (37%), Gaps = 113/350 (32%)
Query: 86  IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
           +  +L P   + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDI--------------------GGTRYRSFPIDLVRELG--------RQLLESV 174
                 +I                     G    +  ++L R L         +Q L+++
Sbjct: 89  ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++H+ ++IH DLK  NIL                  + DG           IKL DFG 
Sbjct: 149 NYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGV 181
Query: 235 T---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQ 286
           +   T   Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E    
Sbjct: 182 SAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--- 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
                             PHH +                          + MR + K+ +
Sbjct: 239 ------------------PHHEL--------------------------NPMRVLLKIAK 254
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                +      + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 255 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 130/350 (37%), Gaps = 113/350 (32%)
Query: 86  IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
           +  +L P   + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDI--------------------GGTRYRSFPIDLVRELG--------RQLLESV 174
                 +I                     G    +  ++L R L         +Q L+++
Sbjct: 89  ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++H+ ++IH DLK  NIL                  + DG           IKL DFG 
Sbjct: 149 NYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGV 181
Query: 235 T---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQ 286
           +   T   Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E    
Sbjct: 182 SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--- 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
                             PHH +                          + MR + K+ +
Sbjct: 239 ------------------PHHEL--------------------------NPMRVLLKIAK 254
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                +      + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 255 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 129/340 (37%), Gaps = 105/340 (30%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
           +   +I         GG  Y    +       D + E G            Q+L++V ++
Sbjct: 73  IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+L ++H DLKPEN+L                        + +L + S I + DFG +  
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDHSYVVSTR----HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
           E  D   V+ST      Y APEV+    ++   D WS+G I   L  G   F    + + 
Sbjct: 169 E--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK- 225
Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
             + E++L             +AE  F      D  D A                     
Sbjct: 226 --LFEQIL-------------KAEYEFDSPYWDDISDSAK-------------------- 250
Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
                     D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 ----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 118/300 (39%), Gaps = 81/300 (27%)
Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRI-------LSKMGEG 103
           G+   A + M +    R+GSP      ++     A      P++R+       L  +G+G
Sbjct: 109 GLKKQAAAEMDF----RSGSPSDNSGAEEMEVSLA-----KPKHRVTMNEFEYLKLLGKG 159
Query: 104 TFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDI--------- 150
           TFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH           
Sbjct: 160 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQ 218
Query: 151 -------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPE 190
                        GG      +R R F  D  R  G +++ ++ ++H E  +++ DLK E
Sbjct: 219 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 278
Query: 191 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRH 250
           N++L    ++K+ D+       KDG+  K                            T  
Sbjct: 279 NLMLDKDGHIKITDFGLCKEGIKDGATMKTF------------------------CGTPE 314
Query: 251 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME-----RVLGP 303
           Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME     R LGP
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP 374

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                                    R ++      R   RQ++    ++H  R+IH DLK
Sbjct: 89  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+ L     VK+ D+   ++   DG   K L                          T
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL------------------------CGT 184
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
            +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 223

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 130/350 (37%), Gaps = 113/350 (32%)
Query: 86  IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
           +  +L P   + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDI--------------------GGTRYRSFPIDLVRELG--------RQLLESV 174
                 +I                     G    +  ++L R L         +Q L+++
Sbjct: 89  ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++H+ ++IH DLK  NIL                  + DG           IKL DFG 
Sbjct: 149 NYLHDNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGV 181
Query: 235 T---TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQ 286
           +   T   Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E    
Sbjct: 182 SAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--- 238
Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
                             PHH +                          + MR + K+ +
Sbjct: 239 ------------------PHHEL--------------------------NPMRVLLKIAK 254
Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                +      + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 255 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 128/342 (37%), Gaps = 111/342 (32%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAI+I+     +I   REA        EI++L++L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
               I   +  + +    +V EL                          Q+L +V ++HE
Sbjct: 198 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
             +IH DLKPEN+LL S E                        +   IK+ DFG +    
Sbjct: 258 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 293
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  H      
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 349
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
                        + ++    + KY                             N I + 
Sbjct: 350 ------------QVSLKDQITSGKY-----------------------------NFIPEV 368
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
               +   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 126/338 (37%), Gaps = 101/338 (29%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
           +   +I         GG  Y    +       D + E G            Q+L++V ++
Sbjct: 73  IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+L ++H DLKPEN+L                        + +L + S I + DFG +  
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           E      S    T  Y APEV+    ++   D WS+G I   L  G   F    + +   
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--- 225
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           + E++L             +AE  F      D  D A                       
Sbjct: 226 LFEQIL-------------KAEYEFDSPYWDDISDSAK---------------------- 250
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
                   D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 --------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 128/342 (37%), Gaps = 111/342 (32%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAI+I+     +I   REA        EI++L++L
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 211
Query: 146 ARHDIGGTR--YRSFPIDLVRELGR------------------------QLLESVAFMHE 179
               I   +  + +    +V EL                          Q+L +V ++HE
Sbjct: 212 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF-- 237
             +IH DLKPEN+LL S E                        +   IK+ DFG +    
Sbjct: 272 NGIIHRDLKPENVLLSSQE------------------------EDCLIKITDFGHSKILG 307
Query: 238 EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  H      
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---- 363
Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
                        + ++    + KY                             N I + 
Sbjct: 364 ------------QVSLKDQITSGKY-----------------------------NFIPEV 382
Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 395
               +   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 383 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 424

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 129/340 (37%), Gaps = 105/340 (30%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDI---------GGTRYRSFPI-------DLVRELGR-----------QLLESVAFM 177
           +   +I         GG  Y    +       D + E G            Q+L++V ++
Sbjct: 73  IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+L ++H DLKPEN+L                        + +L + S I + DFG +  
Sbjct: 133 HDLGIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKM 168
Query: 238 EHQDHSYVVSTR----HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
           E  D   V+ST      Y APEV+    ++   D WS+G I   L  G   F    + + 
Sbjct: 169 E--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK- 225
Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
             + E++L             +AE  F      D  D A                     
Sbjct: 226 --LFEQIL-------------KAEYEFDSPYWDDISDSAK-------------------- 250
Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
                     D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 ----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                                    R ++      R   RQ++    ++H  R+IH DLK
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+ L     VK+ D+   ++   DG   K L                          T
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL------------------------CGT 180
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
            +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                                    R ++      R   RQ++    ++H  R+IH DLK
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+ L     VK+ D+   ++   DG   K L                          T
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL------------------------CGT 180
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
            +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 211
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
                                  GG      +R R F  D  R  G +++ ++ ++H E 
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            +++ DLK EN++L    ++K+ D+       KDG+  K                     
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF------------------- 312
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 313 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 367
Query: 299 -----RVLGP 303
                R LGP
Sbjct: 368 EIRFPRTLGP 377

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 63/290 (21%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN------- 129
           H+V    E   P ++ +L  +G+G+FG+V    +   ++ ++L A+K+++          
Sbjct: 12  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 130 --KYREAAMIEIDVLQRLARHDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
             K     ++E++    +  H    T  + + I       DL   L ++++   E V F 
Sbjct: 72  RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
                     +H L +I+ DLKPENILL    ++K+ D+  LS+ S D            
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESID------------ 178
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
                       H+  +Y    T  Y APEV+   G     D WS G ++ E+ +G   F
Sbjct: 179 ------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARLD-WPDGA 332
           Q  +  E + M+ +    +P  +   A       F+R    RL   PDG 
Sbjct: 227 QGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 12  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 70
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
                                  GG      +R R F  D  R  G +++ ++ ++H E 
Sbjct: 71  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            +++ DLK EN++L    ++K+ D+       KDG+  K                     
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------------- 171
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 172 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 226
Query: 299 -----RVLGP 303
                R LGP
Sbjct: 227 EIRFPRTLGP 236

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
                          R RS  ++L            R   RQ ++ V ++H  R+IH DL
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K  N+ L     VK+ D+   ++   DG   K+L                          
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL------------------------CG 204
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 10  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 68
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
                                  GG      +R R F  D  R  G +++ ++ ++H E 
Sbjct: 69  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            +++ DLK EN++L    ++K+ D+       KDG+  K                     
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------------- 169
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 170 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 224
Query: 299 -----RVLGP 303
                R LGP
Sbjct: 225 EIRFPRTLGP 234

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 11  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 69
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH-EL 180
                                  GG      +R R F  D  R  G +++ ++ ++H E 
Sbjct: 70  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            +++ DLK EN++L    ++K+ D+       KDG+  K                     
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF------------------- 170
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 171 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 225
Query: 299 -----RVLGP 303
                R LGP
Sbjct: 226 EIRFPRTLGP 235

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                                    R ++      R   RQ++    ++H  R+IH DLK
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+ L     VK+ D+   ++   DG   K L                          T
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL------------------------CGT 204
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
            +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 61/249 (24%)
Query: 81  HYVFAIGENLTPRYRILSK---MGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAM 136
           H +    +     +  +SK   +G G FGQV +C +      +A KI+++   K +E   
Sbjct: 75  HRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK 134
Query: 137 IEIDVLQRL-------------ARHDI--------GGT--------RYRSFPIDLVRELG 167
            EI V+ +L             +++DI        GG          Y    +D +  + 
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM- 193
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKFLSRSSKDGSYFKNLPKSS 225
           +Q+ E +  MH++ ++H DLKPENIL V+  A+ +K+ D+  L+R  K     K      
Sbjct: 194 KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG-LARRYKPREKLK------ 246
Query: 226 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
               ++FG              T  + APEV+     ++P D+WSVG I   L SG + F
Sbjct: 247 ----VNFG--------------TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
Query: 286 QTHENLEHL 294
               + E L
Sbjct: 289 LGDNDAETL 297

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 63/290 (21%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN------- 129
           H+V    E   P ++ +L  +G+G+FG+V    +   ++ ++L A+K+++          
Sbjct: 12  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 130 --KYREAAMIEIDVLQRLARHDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
             K     ++E++    +  H    T  + + I       DL   L ++++   E V F 
Sbjct: 72  RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
                     +H L +I+ DLKPENILL    ++K+ D+  LS+ S D            
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESID------------ 178
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
                       H+  +Y    T  Y APEV+   G     D WS G ++ E+ +G   F
Sbjct: 179 ------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARLD-WPDGA 332
           Q  +  E + M+ +    +P  +   A       F+R    RL   PDG 
Sbjct: 227 QGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                                    R ++      R   RQ++    ++H  R+IH DLK
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+ L     VK+ D+   ++   DG   K L                          T
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL------------------------CGT 202
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
            +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 241

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 154
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 155 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 211 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 340 AVW 342
             W
Sbjct: 271 HPW 273

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
                          R RS  ++L            R   RQ ++ V ++H  R+IH DL
Sbjct: 94  FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K  N+ L     VK+ D+   ++   DG   K+L                          
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL------------------------CG 188
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 154
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 155 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 211 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 340 AVW 342
             W
Sbjct: 271 HPW 273

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 63/290 (21%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN------- 129
           H+V    E   P ++ +L  +G+G+FG+V    +   ++ ++L A+K+++          
Sbjct: 13  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 72
Query: 130 --KYREAAMIEIDVLQRLARHDIGGTRYRSFPI-------DLVRELGRQLL---ESVAF- 176
             K     ++E++    +  H    T  + + I       DL   L ++++   E V F 
Sbjct: 73  RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 132
Query: 177 ----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
                     +H L +I+ DLKPENILL    ++K+ D+  LS+ S D            
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESID------------ 179
Query: 227 IKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
                       H+  +Y    T  Y APEV+   G     D WS G ++ E+ +G   F
Sbjct: 180 ------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARLD-WPDGA 332
           Q  +  E + M+ +    +P  +   A       F+R    RL   PDG 
Sbjct: 228 QGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 277

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
                          R RS  ++L            R   RQ ++ V ++H  R+IH DL
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K  N+ L     VK+ D+   ++   DG   K L                          
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL------------------------CG 204
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 55/219 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 153 ------------------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                                    R ++      R   RQ++    ++H  R+IH DLK
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+ L     VK+ D+   ++   DG   K L                          T
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL------------------------CGT 178
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
            +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 57/220 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGG--- 152
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 153 --------------TRYRSFPIDL-----------VRELGRQLLESVAFMHELRLIHTDL 187
                          R RS  ++L            R   RQ ++ V ++H  R+IH DL
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
           K  N+ L     VK+ D+   ++   DG   K L                          
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL------------------------CG 204
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 77/235 (32%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R + R LLE+V+F+H   ++H DLKPENILL     +++ D+ F S   + G   + L 
Sbjct: 202 TRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF-SCHLEPGEKLREL- 259
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI------LGLGWNYPCDLWSVGCILV 276
                                    T  Y APE++         G+    DLW+ G IL 
Sbjct: 260 -----------------------CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296
Query: 277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 336
            L +G   F     +                +++R     +  F   +  +W D +++  
Sbjct: 297 TLLAGSPPFWHRRQI----------------LMLRMIMEGQYQF---SSPEWDDRSST-- 335
Query: 337 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                                    + DL+  LL+ DP  RL A +AL+HPFF R
Sbjct: 336 -------------------------VKDLISRLLQVDPEARLTAEQALQHPFFER 365

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 131/358 (36%), Gaps = 119/358 (33%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
            H      EN  P+      +G G    V  C      +  A+KI+            + 
Sbjct: 9   SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARH-------DIGGTRYRSFPI-DLV------------------ 163
           + REA + E+D+L++++ H       D   T    F + DL+                  
Sbjct: 65  ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 164 --RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
             R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+ F  +           
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----------- 173
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCIL 275
                   +D G    E      V  T  Y APE+I   +  N+P      D+WS G I+
Sbjct: 174 --------LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 335
             L +G   F   + +  L M+                      ++ G+  +W D +   
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS--- 257
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           D+++                        DL+   L   P +R  A EAL HPFF + V
Sbjct: 258 DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           E  +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 225 SAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L 
Sbjct: 156 R-IKIIDFG---LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG + F      E LA +  V               A+ + RR    D     T +DS++
Sbjct: 212 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 340 AVW 342
             W
Sbjct: 272 HPW 274

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 58/223 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLAR----- 147
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  ++EI++L          
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 148 ------HD---------IGGTRYRSFPIDLVRELG--------RQLLESVAFMHELRLIH 184
                 HD           G    +  ++L R L         RQ+LE++ F+H  R+IH
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DLK  N+L+     +++ D+         G   KNL              T + +D   
Sbjct: 141 RDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQKRDS-- 176
Query: 245 VVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 282
            + T ++ APEV++        ++Y  D+WS+G  L+E+   E
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 81/232 (34%), Gaps = 73/232 (31%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
           D   E  RQ+ + +  MHE   +H DLKPENI+  +                        
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK----------------------- 291
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
             +S+ +KLIDFG T       S  V+  T  + APEV  G    Y  D+WSVG +   L
Sbjct: 292 --RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 349
Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 338
            SG + F    + E L                          R     DW          
Sbjct: 350 LSGLSPFGGENDDETL--------------------------RNVKSCDW---------- 373
Query: 339 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                     N+        + D  D ++ LL  DP  R+   +AL HP+ T
Sbjct: 374 ----------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 58/223 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLAR----- 147
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  ++EI++L          
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 148 ------HD---------IGGTRYRSFPIDLVRELG--------RQLLESVAFMHELRLIH 184
                 HD           G    +  ++L R L         RQ+LE++ F+H  R+IH
Sbjct: 73  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DLK  N+L+     +++ D+         G   KNL              T + +D   
Sbjct: 133 RDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQKRDS-- 168
Query: 245 VVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 282
            + T ++ APEV++        ++Y  D+WS+G  L+E+   E
Sbjct: 169 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 81/232 (34%), Gaps = 73/232 (31%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
           D   E  RQ+ + +  MHE   +H DLKPENI+  +                        
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK----------------------- 185
Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
             +S+ +KLIDFG T       S  V+  T  + APEV  G    Y  D+WSVG +   L
Sbjct: 186 --RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 243
Query: 279 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 338
            SG + F    + E L                          R     DW          
Sbjct: 244 LSGLSPFGGENDDETL--------------------------RNVKSCDW---------- 267
Query: 339 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                     N+        + D  D ++ LL  DP  R+   +AL HP+ T
Sbjct: 268 ----------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y+KV D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y+KV D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y+KV D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y+KV D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 52/214 (24%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDI---- 150
           L ++G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 28  LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 151 -----------------GGTRY---RSFPID--LVRELGRQLLESVAFMHELRLIHTDLK 188
                            GG+     R+ P D   +  + +++L+ + ++H  + IH D+K
Sbjct: 88  GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+LL     VK+ D+                           G  T      +  V T
Sbjct: 148 AANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKRNTFVGT 183
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
             + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/357 (21%), Positives = 128/357 (35%), Gaps = 105/357 (29%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLT-----PRYRI--LSKMGEGTFGQVVECFDNEKKELVA 121
           GS P R   +  H  F     L      PR  +    K+GEG+ G V         +LVA
Sbjct: 1   GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSFPI--------------------- 160
           +K +    + R   +    V+ R  +H+     Y S+ +                     
Sbjct: 61  VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 120
Query: 161 ------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
                 + +  +   +L++++ +H   +IH D+K ++ILL     VK+ D+ F ++ SK+
Sbjct: 121 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 180
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
               K L                        V T ++ APE+I  L +    D+WS+G +
Sbjct: 181 VPRRKXL------------------------VGTPYWMAPELISRLPYGPEVDIWSLGIM 216
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
           ++E+  GE  +     L+ + M+   L P                               
Sbjct: 217 VIEMVDGEPPYFNEPPLKAMKMIRDNLPP------------------------------- 245
Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                      RL NL        +  L   L  LL  DPA+R  A E L+HPF  +
Sbjct: 246 -----------RLKNL-----HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 286

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 129/348 (37%), Gaps = 119/348 (34%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSINKYREAAMI 137
           EN  P+      +G G    V  C      +  A+KI+            + + REA + 
Sbjct: 4   ENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 138 EIDVLQRLARH-------DIGGTRYRSFPI-DLV--------------------RELGRQ 169
           E+D+L++++ H       D   T    F + DL+                    R++ R 
Sbjct: 60  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           LLE +  +H+L ++H DLKPENILL     +K+ D+ F  +                   
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ------------------- 160
Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCILVELCSGEA 283
           +D G    E      V  T  Y APE+I   +  N+P      D+WS G I+  L +G  
Sbjct: 161 LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 343
            F   + +  L M+                      ++ G+  +W D +   D+++    
Sbjct: 215 PFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS---DTVK---- 248
Query: 344 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                               DL+   L   P +R  A EAL HPFF +
Sbjct: 249 --------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 33  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 92
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 93  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 153 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 188
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 189 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 248
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 249 I---------------------RMGQYEFPNPEWSEVS---------------------- 265
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 302

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 131/358 (36%), Gaps = 119/358 (33%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
            H      EN  P+      +G G    V  C      +  A+KI+            + 
Sbjct: 9   SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARH-------DIGGTRYRSFPI-DLV------------------ 163
           + REA + E+D+L++++ H       D   T    F + DL+                  
Sbjct: 65  ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 164 --RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
             R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+ F  +           
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----------- 173
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCIL 275
                   +D G      +    V  T  Y APE+I   +  N+P      D+WS G I+
Sbjct: 174 --------LDPG------EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 335
             L +G   F   + +  L M+                      ++ G+  +W D +   
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS--- 257
Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
           D+++                        DL+   L   P +R  A EAL HPFF + V
Sbjct: 258 DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 213
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G+T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 214 ----------GATW-------TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 25  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 84
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 85  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 145 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 180
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 240
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 241 I---------------------RMGQYEFPNPEWSEVS---------------------- 257
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 258 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 294

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 24  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 83
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 84  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 144 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 179
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 239
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 240 I---------------------RMGQYEFPNPEWSEVS---------------------- 256
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 257 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 293

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y+KV D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y+KV D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 23  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 82
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 83  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 143 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 178
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 238
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 239 I---------------------RMGQYEFPNPEWSEVS---------------------- 255
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 256 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 292

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y+KV D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH- 148
            Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH 
Sbjct: 9   NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 149 -------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRL 182
                              +  G     + +          R   +Q++ +V + H  ++
Sbjct: 69  HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKPEN+LL     VK+ D+  LS    DG++ K                       
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT---------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
                + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 166 --SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 202

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y+KV D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 76
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 77  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 137 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 172
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 233 I---------------------RMGQYEFPNPEWSEVS---------------------- 249
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y+KV D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                     HD          GG      +R R F  +  R  G +++ ++ ++H   +
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L    ++K+ D+        DG+  K                       
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
             P
Sbjct: 223 RFP 225

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y+KV D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH- 148
            Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH 
Sbjct: 14  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 149 -------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRL 182
                              +  G     + +          R   +Q++ +V + H  ++
Sbjct: 74  HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKPEN+LL     VK+ D+  LS    DG++ K                       
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT---------------------- 170
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
                + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 171 --SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 207

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 18  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 77
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 78  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 138 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 173
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 233
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 234 I---------------------RMGQYEFPNPEWSEVS---------------------- 250
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 251 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 287

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                     HD          GG      +R R F  +  R  G +++ ++ ++H   +
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L    ++K+ D+        DG+  K                       
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
             P
Sbjct: 223 RFP 225

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 57/219 (26%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH- 148
            Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH 
Sbjct: 15  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 149 -------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRL 182
                              +  G     + +          R   +Q++ +V + H  ++
Sbjct: 75  HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKPEN+LL     VK+ D+  LS    DG++ K                       
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT---------------------- 171
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
                + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 172 --SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 208

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 10  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                     HD          GG      +R R F  +  R  G +++ ++ ++H   +
Sbjct: 70  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 129
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L    ++K+ D+        DG+  K                       
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--------------------- 168
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 169 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 225
Query: 301 LGP 303
             P
Sbjct: 226 RFP 228

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 57/218 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARH-- 148
           Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH  
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 149 ------------------DIGGTRYRSFPIDL-------VRELGRQLLESVAFMHELRLI 183
                             +  G     + +          R   +Q++ +V + H  +++
Sbjct: 66  IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 125
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKPEN+LL     VK+ D+  LS    DG++ K                        
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT----------------------- 161
Query: 244 YVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 279
               + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 162 -SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 198

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+     Y S+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
            +                           + +  +   +L++++ +H   +IH D+K ++
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL     VK+ D+ F ++ SK+    K L                        V T ++
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 313
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
            APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P        
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 365
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
                                             RL NL        +  L   L  LL 
Sbjct: 366 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 386
Query: 372 YDPAERLKAREALRHPFFTR 391
            DPA+R  A E L+HPF  +
Sbjct: 387 RDPAQRATAAELLKHPFLAK 406

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +          
Sbjct: 27  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
                     +    +GG          P+D   +  + R++L+ + ++H  + IH D+K
Sbjct: 87  GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+LL     VK+ D+                           G  T      +  V T
Sbjct: 147 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNXFVGT 182
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
             + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 122
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 183 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 218
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 279 I---------------------RMGQYEFPNPEWSEVS---------------------- 295
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 78
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 79  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 174
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 235 I---------------------RMGQYEFPNPEWSEVS---------------------- 251
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 76
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 77  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 137 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 172
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 233 I---------------------RMGQYEFPNPEWSEVS---------------------- 249
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 12  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                     HD          GG      +R R F  +  R  G +++ ++ ++H   +
Sbjct: 72  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L    ++K+ D+        DG+  K                       
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 170
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 171 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 227
Query: 301 LGP 303
             P
Sbjct: 228 RFP 230

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+     Y S+
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
            +                           + +  +   +L++++ +H   +IH D+K ++
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL     VK+ D+ F ++ SK+    K L                        V T ++
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 236
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
            APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P        
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 288
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
                                             RL NL        +  L   L  LL 
Sbjct: 289 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 309
Query: 372 YDPAERLKAREALRHPFFTR 391
            DPA+R  A E L+HPF  +
Sbjct: 310 RDPAQRATAAELLKHPFLAK 329

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 27/130 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G 
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 283 ALFQTHENLE 292
             F   E ++
Sbjct: 236 PPFFADEPIQ 245

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 52/225 (23%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-----QRLARHDIG 151
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L     Q + R+   
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 152 GTRYRSF--PIDLVRE----------------------------------LGRQLLESVA 175
               R+F  P+  V++                                  L RQ+LE+++
Sbjct: 71  WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++H   +IH DLKP NI +  +  VK+ D+             KN+ +S  I  +D  + 
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQNL 180
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
                + +  + T  Y A EV+ G G +N   D++S+G I  E+ 
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 78
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 79  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 174
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 235 I---------------------RMGQYEFPNPEWSEVS---------------------- 251
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 101/337 (29%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 69  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 128
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 129 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 189 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 224
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 299
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 284
Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +                     R  + ++P+   S  S                      
Sbjct: 285 I---------------------RMGQYEFPNPEWSEVS---------------------- 301
Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 302 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 52/225 (23%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-----QRLARHDIG 151
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L     Q + R+   
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 152 GTRYRSF--PIDLVRE----------------------------------LGRQLLESVA 175
               R+F  P+  V++                                  L RQ+LE+++
Sbjct: 71  WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++H   +IH DLKP NI +  +  VK+ D+             KN+ +S  I  +D  + 
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQNL 180
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 279
                + +  + T  Y A EV+ G G +N   D++S+G I  E+ 
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                     HD          GG      +R R F  +  R  G +++ ++ ++H   +
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L    ++K+ D+        DG+  K                       
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
             P
Sbjct: 223 RFP 225

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                     HD          GG      +R R F  +  R  G +++ ++ ++H   +
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L    ++K+ D+        DG+  K                       
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
             P
Sbjct: 223 RFP 225

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 213
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 214 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 57/243 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQR----- 144
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 145 -------LARHD---------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                     HD          GG      +R R F  +  R  G +++ ++ ++H   +
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L    ++K+ D+        DG+  K                       
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--------------------- 165
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 166 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 301 LGP 303
             P
Sbjct: 223 RFP 225

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 138 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 187
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 188 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 213
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 214 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 69/272 (25%)
Query: 93  RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEG+FG+ +      D  +  +  I I R  +K RE +  E+ VL  +   +
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 150 I---------------------GGTRYRS--------FPIDLVRELGRQLLESVAFMHEL 180
           I                     GG  ++         F  D + +   Q+  ++  +H+ 
Sbjct: 85  IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-----ST 235
           +++H D+K +NI L                 +KDG+          ++L DFG     ++
Sbjct: 145 KILHRDIKSQNIFL-----------------TKDGT----------VQLGDFGIARVLNS 177
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ--THENLEH 293
           T E       + T +Y +PE+     +N   D+W++GC+L ELC+ +  F+  + +NL  
Sbjct: 178 TVELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV- 234
Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 325
           L ++     P+  H          + F+R  R
Sbjct: 235 LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 193
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 ----------GRTW-------TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+     Y S+
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
            +                           + +  +   +L++++ +H   +IH D+K ++
Sbjct: 96  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL     VK+ D+ F ++ SK+    K L                        V T ++
Sbjct: 156 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 191
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
            APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P        
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 243
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
                                             RL NL        +  L   L  LL 
Sbjct: 244 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 264
Query: 372 YDPAERLKAREALRHPFFTR 391
            DPA+R  A E L+HPF  +
Sbjct: 265 RDPAQRATAAELLKHPFLAK 284

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 130 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK---------- 179
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 180 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +          
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
                     +    +GG          P+D   +  + R++L+ + ++H  + IH D+K
Sbjct: 72  GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+LL     VK+ D+                           G  T      +  V T
Sbjct: 132 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNXFVGT 167
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
             + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 186 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 186 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +          
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
                     +    +GG          P+D   +  + R++L+ + ++H  + IH D+K
Sbjct: 72  GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+LL     VK+ D+                           G  T      +  V T
Sbjct: 132 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNTFVGT 167
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
             + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 129 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 178
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 179 ----------GRTW-------TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+     Y S+
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
            +                           + +  +   +L++++ +H   +IH D+K ++
Sbjct: 87  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL     VK+ D+ F ++ SK+    K L                        V T ++
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 182
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
            APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P        
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 234
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
                                             RL NL        +  L   L  LL 
Sbjct: 235 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 255
Query: 372 YDPAERLKAREALRHPFFTR 391
            DPA+R  A E L+HPF  +
Sbjct: 256 RDPAQRATAAELLKHPFLAK 275

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 52/214 (24%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQR---------- 144
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +          
Sbjct: 32  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 145 ----------LARHDIGGTRYRSF----PID--LVRELGRQLLESVAFMHELRLIHTDLK 188
                     +    +GG          P+D   +  + R++L+ + ++H  + IH D+K
Sbjct: 92  GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
             N+LL     VK+ D+                           G  T      +  V T
Sbjct: 152 AANVLLSEHGEVKLADFGVA------------------------GQLTDTQIKRNTFVGT 187
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
             + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 117/320 (36%), Gaps = 98/320 (30%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+     Y S+
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
            +                           + +  +   +L++++ +H   +IH D+K ++
Sbjct: 91  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL     VK+ D+ F ++ SK+    K L                        V T ++
Sbjct: 151 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXL------------------------VGTPYW 186
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
            APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P        
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------- 238
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
                                             RL NL        +  L   L  LL 
Sbjct: 239 ----------------------------------RLKNL-----HKVSPSLKGFLDRLLV 259
Query: 372 YDPAERLKAREALRHPFFTR 391
            DPA+R  A E L+HPF  +
Sbjct: 260 RDPAQRATAAELLKHPFLAK 279

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 54/234 (23%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V    +    + VA+K +    + R   +    V+ R   HD     Y S+
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 159 PI---------------------------DLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
            +                           + +  +   +L +++++H   +IH D+K ++
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL S   +K+ D+ F ++ SK+      +PK   +                  V T ++
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKE------VPKRKXL------------------VGTPYW 207
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP 305
            APEVI  L +    D+WS+G +++E+  GE     + N   L  M R+   LP
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDSLP 258

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ ++ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+ E+V F+H   L+H DLKP NI     + VKV D+  ++   +D      L    A  
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 183
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                     +  H+  V T+ Y +PE I G  +++  D++S+G IL EL
Sbjct: 184 ----------YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 120/338 (35%), Gaps = 115/338 (34%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------REAAMIEI-- 139
           Y +   +G+G F  V  C + E  +  A+KIV  + K+            REA++  +  
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 140 --DVLQRLARHDIGGTRYRSFPI----DLVREL------------------GRQLLESVA 175
              +++ L  +   G  Y  F      DL  E+                   RQ+LE++ 
Sbjct: 87  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           + H+  +IH D+KP  +LL S E                         S+ +KL  FG  
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFG-V 181
Query: 236 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
             +  +   V    V T H+ APEV+    +  P D+W  G IL  L S           
Sbjct: 182 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 230
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
                     G LP +                       G   R     +    ++    
Sbjct: 231 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 257
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             H+  SA DL+   + +L  DPAER+   EAL HP+ 
Sbjct: 258 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 292

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 26/197 (13%)
Query: 157 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
           S   D   +  +Q+L+ V ++H  R+ H DLKPENI+L+                     
Sbjct: 104 SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD-------------------- 143
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
             KN+P +  IKLIDFG        + +  +  T  + APE++         D+WS+G I
Sbjct: 144 --KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
              L SG + F      E L  +  V               A+ + RR    D     T 
Sbjct: 201 TYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTI 260
Query: 335 RDSMRAVW-KLLRLPNL 350
             S+   W K +R  N+
Sbjct: 261 AQSLEHSWIKAIRRRNV 277

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 125/356 (35%), Gaps = 111/356 (31%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--R 126
            S  W+   +D   +F   E L          G G F +VV   +    +L A+K +  +
Sbjct: 9   SSSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKCIPKK 58
Query: 127 SINKYREAAMIEIDVLQRLARHDI---------------------GGTRY-----RSFPI 160
           ++     +   EI VL+++   +I                     GG  +     + F  
Sbjct: 59  ALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYT 118
Query: 161 DL-VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
           +     L RQ+L++V ++H + ++H DLKPEN+L  S +                     
Sbjct: 119 EKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD--------------------- 157
Query: 220 NLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
              + S I + DFG +  E +    S    T  Y APEV+    ++   D WS+G I   
Sbjct: 158 ---EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 214
Query: 278 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 337
           L  G   F    + +   + E++L             +AE  F      D  D A     
Sbjct: 215 LLCGYPPFYDENDSK---LFEQIL-------------KAEYEFDSPYWDDISDSAK---- 254
Query: 338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 393
                                     D ++ L+  DP +R    +A RHP+   D 
Sbjct: 255 --------------------------DFIRNLMEKDPNKRYTCEQAARHPWIAGDT 284

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 119/336 (35%), Gaps = 103/336 (30%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T  Y++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RH--------DIGGTRYRSFPIDLV-----------RE---------LGRQLLESVAFMH 178
           +H         I    +     DLV           RE           +Q+LESV   H
Sbjct: 61  KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              ++H DLKPEN+LL S                          K +A+KL DFG     
Sbjct: 121 LNGIVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEV 156
Query: 239 HQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
             D         T  Y +PEV+    +  P D+W+ G IL  L  G   F   +      
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ----- 211
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
                              R  +  + GA  D+P            W             
Sbjct: 212 ------------------HRLYQQIKAGA-YDFPSPE---------W------------- 230
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           D    +  DL+  +L  +PA+R+ A EAL+HP+  +
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 120/338 (35%), Gaps = 115/338 (34%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------REAAMIEI-- 139
           Y +   +G+G F  V  C + E  +  A+KIV  + K+            REA++  +  
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 140 --DVLQRLARHDIGGTRYRSFPI----DLVREL------------------GRQLLESVA 175
              +++ L  +   G  Y  F      DL  E+                   RQ+LE++ 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           + H+  +IH D+KP  +LL S E                         S+ +KL  FG  
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKLGGFG-V 179
Query: 236 TFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
             +  +   V    V T H+ APEV+    +  P D+W  G IL  L S           
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----------- 228
Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
                     G LP +                       G   R     +    ++    
Sbjct: 229 ----------GCLPFY-----------------------GTKERLFEGIIKGKYKMNPRQ 255
Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             H+  SA DL+   + +L  DPAER+   EAL HP+ 
Sbjct: 256 WSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 119/336 (35%), Gaps = 103/336 (30%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T  Y++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RH--------DIGGTRYRSFPIDLV-----------RE---------LGRQLLESVAFMH 178
           +H         I    +     DLV           RE           +Q+LESV   H
Sbjct: 61  KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              ++H DLKPEN+LL S                          K +A+KL DFG     
Sbjct: 121 LNGIVHRDLKPENLLLASKS------------------------KGAAVKLADFGLAIEV 156
Query: 239 HQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
             D         T  Y +PEV+    +  P D+W+ G IL  L  G   F   +      
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ----- 211
Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
                              R  +  + GA  D+P            W             
Sbjct: 212 ------------------HRLYQQIKAGA-YDFPSPE---------W------------- 230
Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           D    +  DL+  +L  +PA+R+ A EAL+HP+  +
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+I+  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 106/290 (36%), Gaps = 71/290 (24%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
           G   +R +D + HY   +GE L          G G F  V +C      +  A K ++  
Sbjct: 1   GMSTFRQEDVEDHY--EMGEEL----------GSGQFAIVRKCRQKGTGKEYAAKFIKKR 48
Query: 129 -------NKYREAAMIEIDVLQRL------ARHDI---------------GGTRY----- 155
                     RE    E+++L+ +        HDI               GG  +     
Sbjct: 49  RLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE 108
Query: 156 -RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
             S   D   +  +Q+L+ V ++H  R+ H DLKPENI+L+                   
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD------------------ 150
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVG 272
               KN+P +  IKLIDFG        + +  +  T  + APE++         D+WS+G
Sbjct: 151 ----KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205
Query: 273 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
            I   L SG + F      E L  +  V               A+ + RR
Sbjct: 206 VITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 25/168 (14%)
Query: 157 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
           S   D   +  +Q+L+ V ++H  R+ H DLKPENI+L+                     
Sbjct: 125 SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD-------------------- 164
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
             KN+P +  IKLIDFG        + +  +  T  + APE++         D+WS+G I
Sbjct: 165 --KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
              L SG + F      E L  +  V               A+ + RR
Sbjct: 222 TYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 86/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S   +
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTE 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 30/133 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +NILL                   DGS          +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 155
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE  
Sbjct: 156 KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 285 FQTHENLEHLAMM 297
           +     L  L ++
Sbjct: 216 YLNENPLRALYLI 228

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 30/133 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +NILL                   DGS          +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 155
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE  
Sbjct: 156 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 285 FQTHENLEHLAMM 297
           +     L  L ++
Sbjct: 216 YLNENPLRALYLI 228

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +NILL                   DGS          +
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 156
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 157 KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y+KV D+    R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
           +Q+L+ V ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+  
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                   FG              T  + APE++         D+WS+G I   L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
            F      E LA +  V          +    A+ + R+    +     T ++++R  W
Sbjct: 217 PFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y AP +IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
           +Q+L+ V ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+  
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                   FG              T  + APE++         D+WS+G I   L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
            F      E LA +  V          +    A+ + R+    +     T ++++R  W
Sbjct: 217 PFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 84/230 (36%), Gaps = 78/230 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA                             +K
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSA---------------------------GELK 174
Query: 229 LIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           + DFG S        + +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ 
Sbjct: 175 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
           +   E    + RV    P             +   GAR                      
Sbjct: 235 NTYQETYKRISRVEFTFP------------DFVTEGAR---------------------- 260
Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                           DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 261 ----------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH D+K +NILL                   DGS          +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILL-----------------GMDGS----------V 155
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 156 KLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 171 L----------------CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 171 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+ E+V F+H   L+H DLKP NI     + VKV D+  ++   +D      L    A  
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 229
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                     +  H   V T+ Y +PE I G  +++  D++S+G IL EL
Sbjct: 230 ----------YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
           +Q+L+ V ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+  
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                   FG              T  + APE++         D+WS+G I   L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
            F      E LA +  V               A+ + R+    +     T ++++R  W
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 171 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 182
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 183 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 227 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 251
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 252 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+ +   +          P S    
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHA----------PSSRRTT 166
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 167 L----------------SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 211 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 235
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 236 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 171 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 71/232 (30%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + ++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H    T
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 154 RYRSF-----------------------PIDLVRE-------------LGRQLLESVAFM 177
            Y +F                         DL++              + R++L  ++ +
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+ ++IH D+K +N+LL                            +++ +KL+DFG +  
Sbjct: 146 HQHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQ 178
Query: 238 EHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 281
             +     +  + T ++ APEVI         +++  DLWS+G   +E+  G
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 98/320 (30%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF 158
           K+GEG+ G V    +      VA+K++    + R   +    V+ R  +H      Y+S+
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 159 PI-----------------DLVREL----------GRQLLESVAFMHELRLIHTDLKPEN 191
            +                 D+V ++             +L+++A++H   +IH D+K ++
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 251
           ILL     VK+ D+ F ++ SKD      +PK   +                  V T ++
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKD------VPKRKXL------------------VGTPYW 207
Query: 252 RAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR 311
            APEVI    +    D+WS+G +++E+  GE                             
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEP---------------------------- 239
Query: 312 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR 371
                  YF             S   ++A+ +L   P   +++    +  L D L+ +L 
Sbjct: 240 ------PYF-------------SDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280
Query: 372 YDPAERLKAREALRHPFFTR 391
            DP ER  A+E L HPF  +
Sbjct: 281 RDPQERATAQELLDHPFLLQ 300

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 123/330 (37%), Gaps = 101/330 (30%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-IEIDVLQRLAR 147
           N+   +  +  +G G F +V         +L A+K ++    +R++++  EI VL+++  
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 148 HDI-------GGTRYRSFPIDLV-------RELGR-------------QLLESVAFMHEL 180
            +I         T +    + LV       R L R             Q+L +V ++HE 
Sbjct: 66  ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLKPEN+L ++ E                        ++S I + DFG +  E  
Sbjct: 126 GIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSKMEQN 161
Query: 241 D-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMME 298
              S    T  Y APEV+    ++   D WS+G I  + LC     ++  E+     + E
Sbjct: 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES----KLFE 217
Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           ++                E Y+   +   W D                        +  S
Sbjct: 218 KI---------------KEGYYEFESPF-WDD------------------------ISES 237
Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPF 388
           A D I     LL  DP ER    +AL HP+
Sbjct: 238 AKDFI---CHLLEKDPNERYTCEKALSHPW 264

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 87/231 (37%), Gaps = 57/231 (24%)
Query: 84  FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV- 141
            A     T  Y++  ++G+G F  V  C      +  A KI+ +     R+   +E +  
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 142 LQRLARH--------DIGGTRYRSFPIDLV-----------RE---------LGRQLLES 173
           + RL +H         I    +     DLV           RE            Q+LES
Sbjct: 83  ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILES 142
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           V  +H+  ++H DLKPEN+LL S                          K +A+KL DFG
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASK------------------------CKGAAVKLADFG 178
Query: 234 ---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                  E Q       T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 179 LAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 169
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 170 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 214 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 238
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 239 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 166
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 167 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 211 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 235
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 236 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 54/232 (23%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---------------RSINK 130
           IG+ +  RY+I+ K+G G    V    D      VAIK +               R ++ 
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 131 YRE------AAMIEIDVLQR---LARHDIGGTRYRSF-------PIDLVRELGRQLLESV 174
             +       +MI++D       L    I G     +        +D       Q+L+ +
Sbjct: 65  SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
              H++R++H D+KP+NIL+ S + +K+ D+      S+                     
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE--------------------- 163
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
           T+    +H  V+ T  Y +PE   G   +   D++S+G +L E+  GE  F 
Sbjct: 164 TSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 73/226 (32%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+LE+V   H++ ++H DLKPEN+LL S                          K +A+
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASK------------------------LKGAAV 163
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           KL DFG       E Q       T  Y +PEV+    +  P DLW+ G IL  L  G   
Sbjct: 164 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F   +                         R  +  + GA  D+P            W  
Sbjct: 224 FWDEDQ-----------------------HRLYQQIKAGA-YDFPSPE---------W-- 248
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      D    +  DL+  +L  +P++R+ A EAL+HP+ +
Sbjct: 249 -----------DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAA 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
           +Q+L+ V ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+  
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                   FG              T  + APE++         D+WS+G I   L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
            F      E LA +  V               A+ + R+    +     T ++++R  W
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 116/328 (35%), Gaps = 97/328 (29%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA------------MIEIDVLQRLAR 147
           +G G  G+V+ECF     +  A+K++    K R+              +  +DV + +  
Sbjct: 18  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHH 77
Query: 148 HD----------IGGTRY--------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP 189
                        GG  +        ++F      E+ R +  ++ F+H   + H D+KP
Sbjct: 78  GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKP 137
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-VST 248
           EN+L  S E                        K + +KL DFG      Q+       T
Sbjct: 138 ENLLYTSKE------------------------KDAVLKLTDFGFAKETTQNALQTPCYT 173
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 308
            +Y APEV+    ++  CD+WS+G I+  L  G   F ++        M+R +       
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI------- 226
Query: 309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
                 R  +Y                            PN     V   A  LI L   
Sbjct: 227 ------RLGQY--------------------------GFPNPEWSEVSEDAKQLIRL--- 251
Query: 369 LLRYDPAERLKAREALRHPFFTRDVRRP 396
           LL+ DP ERL   + + HP+  + +  P
Sbjct: 252 LLKTDPTERLTITQFMNHPWINQSMVVP 279

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 116/328 (35%), Gaps = 97/328 (29%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA------------MIEIDVLQRLAR 147
           +G G  G+V+ECF     +  A+K++    K R+              +  +DV + +  
Sbjct: 37  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHH 96
Query: 148 HD----------IGGTRY--------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP 189
                        GG  +        ++F      E+ R +  ++ F+H   + H D+KP
Sbjct: 97  GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKP 156
Query: 190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-VST 248
           EN+L  S E                        K + +KL DFG      Q+       T
Sbjct: 157 ENLLYTSKE------------------------KDAVLKLTDFGFAKETTQNALQTPCYT 192
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 308
            +Y APEV+    ++  CD+WS+G I+  L  G   F ++        M+R +       
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI------- 245
Query: 309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
                 R  +Y                            PN     V   A  LI L   
Sbjct: 246 ------RLGQY--------------------------GFPNPEWSEVSEDAKQLIRL--- 270
Query: 369 LLRYDPAERLKAREALRHPFFTRDVRRP 396
           LL+ DP ERL   + + HP+  + +  P
Sbjct: 271 LLKTDPTERLTITQFMNHPWINQSMVVP 298

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTX 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTD 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 57/231 (24%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K ++   K R    +             +D
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD 122
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 123 VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI 182
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 240
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 183 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 218
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
             +    T +Y APEV+    ++  CD WS+G I   L  G   F ++  L
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
           +Q+L+ V ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+  
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                   FG              T  + APE++         D+WS+G I   L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
            F      E LA +  V          +    A+ + R+    +     T ++++R  W
Sbjct: 217 PFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 167
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 168 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 212 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 236
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 237 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 115 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 164
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 165 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 209 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 233
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 234 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPK 223
           +Q+L+ V ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+  
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI-- 178
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                   FG              T  + APE++         D+WS+G I   L SG +
Sbjct: 179 --------FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
            F      E LA +  V               A+ + R+    +     T ++++R  W
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 170
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 171 L----------------XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 215 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 239
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+L+    Y++V D+ F  R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T    APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAA 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 210 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
            R    Q++ +  ++H L LI+ DLKPEN+++    Y++V D+    R            
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK---------- 192
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
                     G T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 193 ----------GRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 56/231 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+G+FG+V+      ++   A+K++  ++I K +E    M E +VL +  +H 
Sbjct: 40  FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG       R R F     R    ++  ++ ++H L 
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +++ DLKPENILL S  ++ + D+     +                  I+  STT     
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKEN------------------IEHNSTT----- 196
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
            S    T  Y APEV+    ++   D W +G +L E+  G   F +    E
Sbjct: 197 -STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDD 191
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 192 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 236 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 260
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 261 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+ R++H DLK EN+LL +   +K+ D+ F +  +  G            
Sbjct: 118 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG------------ 165
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
           KL  F               +  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 166 KLDTF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 213 G-QNLKELR--ERVL 224

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 123/340 (36%), Gaps = 112/340 (32%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH----- 148
           Y +   +G G++ +   C         A+K+   I+K +     EI++L R  +H     
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 149 -----DIGGTRYRSFPIDLVREL--GRQLLE----------------------SVAFMHE 179
                D G   Y      LV EL  G +LL+                      +V ++H 
Sbjct: 86  LKDVYDDGKHVY------LVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             ++H DLKP NIL                       Y         +++ DFG      
Sbjct: 140 QGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQLR 176
Query: 240 QDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            ++  +++   T ++ APEV+   G++  CD+WS+G +L  + +G   F           
Sbjct: 177 AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--------- 227
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                GP        +D   E   R G+      G          W            V 
Sbjct: 228 -----GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT----------VS 256
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            +A DL+     +L  DP +RL A++ L+HP+ T+  + P
Sbjct: 257 ETAKDLV---SKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 83/230 (36%), Gaps = 78/230 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA                             +K
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSA---------------------------GELK 149
Query: 229 LIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           + DFG S          +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ 
Sbjct: 150 IADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
           +   E    + RV    P             +   GAR                      
Sbjct: 210 NTYQETYKRISRVEFTFP------------DFVTEGAR---------------------- 235
Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                           DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 236 ----------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 170
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 171 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 52/223 (23%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-----QRLARHDIG 151
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L     Q + R+   
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 152 GTRYRSF--PIDLVRE----------------------------------LGRQLLESVA 175
               R+F  P   V++                                  L RQ+LE+++
Sbjct: 71  WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++H   +IH +LKP NI +  +  VK+ D+             KN+ +S  I  +D  + 
Sbjct: 131 YIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------KNVHRSLDILKLDSQNL 180
Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVE 277
                + +  + T  Y A EV+ G G +N   D +S+G I  E
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 86/228 (37%), Gaps = 57/228 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
           RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 19  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 77
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
                               GG  +        F  D  R   +QL+  V++ H +++ H
Sbjct: 78  RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 137
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
            DLK EN LL                   DGS       +  +K+ DFG   ++  H   
Sbjct: 138 RDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSSVLHSQP 172
Query: 243 SYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHE 289
              V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 173 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 123/340 (36%), Gaps = 112/340 (32%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH----- 148
           Y +   +G G++ +   C         A+K+   I+K +     EI++L R  +H     
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 149 -----DIGGTRYRSFPIDLVREL--GRQLLE----------------------SVAFMHE 179
                D G   Y      LV EL  G +LL+                      +V ++H 
Sbjct: 86  LKDVYDDGKHVY------LVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             ++H DLKP NIL                       Y         +++ DFG      
Sbjct: 140 QGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQLR 176
Query: 240 QDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            ++  +++   T ++ APEV+   G++  CD+WS+G +L  + +G   F           
Sbjct: 177 AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--------- 227
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                GP        +D   E   R G+      G          W            V 
Sbjct: 228 -----GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT----------VS 256
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            +A DL+     +L  DP +RL A++ L+HP+ T+  + P
Sbjct: 257 ETAKDLVS---KMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDD 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           R+ L+++ F+H  ++IH ++K +NILL                   DGS          +
Sbjct: 124 RECLQALEFLHSNQVIHRNIKSDNILL-----------------GMDGS----------V 156
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
           KL DFG     T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 157 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
           RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 78
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
                               GG  +        F  D  R   +QL+  V++ H +++ H
Sbjct: 79  RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
            DLK EN LL                   DGS       +  +K+ DFG    +  H   
Sbjct: 139 RDLKLENTLL-------------------DGS------PAPRLKIADFGYSKASVLHSQP 173
Query: 243 SYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHE 289
              V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 174 KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ ++           +  + P S    
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTT 167
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 168 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 212 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 236
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 237 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 85/226 (37%), Gaps = 73/226 (32%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+LE+V   H++ ++H +LKPEN+LL S                          K +A+
Sbjct: 117 QQILEAVLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAV 152
Query: 228 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           KL DFG       E Q       T  Y +PEV+    +  P DLW+ G IL  L  G   
Sbjct: 153 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F   +                         R  +  + GA  D+P            W  
Sbjct: 213 FWDEDQ-----------------------HRLYQQIKAGA-YDFPSPE---------W-- 237
Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                      D    +  DL+  +L  +P++R+ A EAL+HP+ +
Sbjct: 238 -----------DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+ R++H DLK EN+LL +   +K+ D+ F +  +  G            
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG------------ 168
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
           KL  F                  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 169 KLDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 216 G-QNLKELR--ERVL 227

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 58/242 (23%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----------------------SINK 130
           RY  +  +G G FG      D   KELVA+K +                       +I +
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVR 80
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
           ++E  +     L  +  +  GG  Y        F  D  R   +QLL  V++ H +++ H
Sbjct: 81  FKEVILTPTH-LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
            DLK EN LL                   DGS       +  +K+ DFG   ++  H   
Sbjct: 140 RDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSSVLHSQP 174
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQT-HENLEHLAMMERV 300
              V T  Y APEV+L   ++    D+WS G  L  +  G   F+   E  ++   ++R+
Sbjct: 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI 234
Query: 301 LG 302
           L 
Sbjct: 235 LS 236

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 146
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ ++           +  + P S    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTT 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 99  FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                    + +F       
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------ANSF------- 194
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++     +   DLW++GCI+ +L +G
Sbjct: 195 -VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
           +++ F H+  +IH D+KP NIL+ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVXQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
           R L +Q+L +V + H   ++H DLKPEN+LL +    K+ D+  LS    DG + ++   
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFLRD--- 169
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                    GS  +   +   V+S R Y  PEV          D+WS G IL  L  G  
Sbjct: 170 -------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTL 209
Query: 284 LF 285
            F
Sbjct: 210 PF 211

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
           ++  +H+  +I+ DLKPENI+L    +VK+ D+     S  DG+                
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--------------- 177
Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                    H++   T  Y APE+++  G N   D WS+G ++ ++ +G   F      +
Sbjct: 178 --------THTF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK 228
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 324
            +  + +    LP ++   A    +K  +R A
Sbjct: 229 TIDKILKCKLNLPPYLTQEARDLLKKLLKRNA 260

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           L  EL  Q+ + V ++H  +LIH DLKP NI LV  + VK+ D+  ++    DG   ++ 
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS- 195
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                                     T  Y +PE I    +    DL+++G IL EL
Sbjct: 196 ------------------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+LE+V   H++ ++H DLKPEN+LL S                          K +A+
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASK------------------------CKGAAV 145
Query: 228 KLIDFGSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
           KL DFG       D         T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 59/243 (24%)
Query: 96  ILSKM-GEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDI 150
           IL KM G+G+FG+V      +  +  AIK ++     ++   E  M+E  VL     H  
Sbjct: 20  ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 151 GGTRYRSF--------------------------PIDLVRE--LGRQLLESVAFMHELRL 182
               + +F                            DL R      +++  + F+H   +
Sbjct: 80  LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ DLK +NILL    ++K+ D+         G   +N+       L D  +  F     
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKTNXF----- 178
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 300
                T  Y APE++LG  +N+  D WS G +L E+  G++ F  Q  E L H   M+  
Sbjct: 179 ---CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 235
Query: 301 LGP 303
             P
Sbjct: 236 FYP 238

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           + +L +VA+ H+L + H DLKPEN L ++      PD                    S +
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPL 148
Query: 228 KLIDFG-STTFEHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           KLIDFG +  F+        V T +Y +P+V+ GL +   CD WS G ++  L  G   F
Sbjct: 149 KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 207
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
               + E +  +       P    +    +AE   RR
Sbjct: 208 SAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           + +L +VA+ H+L + H DLKPEN L ++      PD                    S +
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPL 165
Query: 228 KLIDFG-STTFEHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           KLIDFG +  F+        V T +Y +P+V+ GL +   CD WS G ++  L  G   F
Sbjct: 166 KLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 224
Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 322
               + E +  +       P    +    +AE   RR
Sbjct: 225 SAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----------------------SINK 130
           RY ++  +G G FG      D +  ELVA+K +                       +I +
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVR 79
Query: 131 YREAAMIEIDVLQRLARHDIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
           ++E  +     L  +  +  GG  +        F  D  R   +QL+  V++ H +++ H
Sbjct: 80  FKEVILTPTH-LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
            DLK EN LL                   DGS       +  +K+ DFG   ++  H   
Sbjct: 139 RDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSSVLHSQP 173
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
              V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHE 289
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F   + +
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 290 NLEHLAMMERVLGPLPHHMVIRAD 313
           ++ +  + E  + P   H  + AD
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD 249

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
           R L +Q+L +V + H   ++H DLKPEN+LL +    K+ D+  LS    DG + +    
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFLRT--- 169
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                    GS  +   +   V+S R Y  PEV          D+WS G IL  L  G  
Sbjct: 170 -------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTL 209
Query: 284 LF 285
            F
Sbjct: 210 PF 211

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 62/311 (19%)
Query: 84  FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAM---IEI 139
            AI +     Y I   +GEG+FG+V      + ++ VA+K + R + K  +  M    EI
Sbjct: 1   MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI 60
Query: 140 DVLQRLAR-HDIGGTRYRSFPIDLV-------------------------RELGRQLLES 173
             L+ L   H I      + P D+V                         R   +Q++ +
Sbjct: 61  SYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICA 120
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + + H  +++H DLKPEN+LL     VK+ D+  LS    DG++ K    S         
Sbjct: 121 IEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG-LSNIMTDGNFLKTSCGSP-------- 171
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLE 292
                           +Y APEVI G  +  P  D+WS G +L  +  G   F      E
Sbjct: 172 ----------------NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD----E 211
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI- 351
            +  + + +    + M       A+   RR    D     T ++  R  W  + LP+ + 
Sbjct: 212 FIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLR 271
Query: 352 -MQHVDHSAGD 361
            M+ V  S  D
Sbjct: 272 PMEEVQGSYAD 282

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H  R+++ DLKPENILL    ++++ D               ++P+   IK        
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK-------- 343
Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                    V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       
Sbjct: 344 -------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 297 MERVLGPLPHHMVIRADRRA 316
           +ER++  +P     R   +A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
           ++  +H+  +I+ DLKPENI+L    +VK+ D+     S  DG+                
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--------------- 177
Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                    H +   T  Y APE+++  G N   D WS+G ++ ++ +G   F      +
Sbjct: 178 --------THXF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK 228
Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 324
            +  + +    LP ++   A    +K  +R A
Sbjct: 229 TIDKILKCKLNLPPYLTQEARDLLKKLLKRNA 260

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 99  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H  R+++ DLKPENILL    ++++ D               ++P+   IK        
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK-------- 343
Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                    V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       
Sbjct: 344 -------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 396
Query: 297 MERVLGPLPHHMVIRADRRA 316
           +ER++  +P     R   +A
Sbjct: 397 VERLVKEVPEEYSERFSPQA 416

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  ++IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 116 ELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAA 165
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 166 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              +    + RV    P             +   GAR                       
Sbjct: 210 TYQDTYKRISRVEFTFP------------DFVTEGAR----------------------- 234
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ---------------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 99
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 159
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                    + +F       
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------ANSF------- 195
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 196 -VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 97  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK         +++A                  
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQA-------RANAF----------------- 192
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 193 -VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 117/332 (35%), Gaps = 100/332 (30%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
             T  Y +   +G G++     C         A+KI   I+K +     EI++L R  +H
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 ----------DIGGTRYRSFPI----DLVRELGRQ--------------LLESVAFMHEL 180
                     D G   Y    +    +L+ ++ RQ              + ++V ++H  
Sbjct: 76  PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLKP NIL                       Y        +I++ DFG       
Sbjct: 136 GVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAKQLRA 172
Query: 241 DHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
           ++  +++   T ++ APEV+   G++  CD+WS+G +L  + +G   F            
Sbjct: 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN---------- 222
Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
               GP         D   E+   R     +       +S+    K              
Sbjct: 223 ----GP---------DDTPEEILARIGSGKFSLSGGYWNSVSDTAK-------------- 255
Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                 DL+  +L  DP +RL A   LRHP+ 
Sbjct: 256 ------DLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 43  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 101
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 161
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 162 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 196
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 197 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 185
Query: 232 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 186 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 83/226 (36%), Gaps = 53/226 (23%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
           RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 78
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
                               GG  +        F  D  R   +QL+  V++ H +++ H
Sbjct: 79  RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DLK EN LL  +     P  K  +      S   + PKS+                   
Sbjct: 139 RDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKST------------------- 176
Query: 245 VVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
            V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 62/235 (26%)
Query: 83  VFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----NKYREAAM 136
           VF   E++    + IL  +G+G+FG+V     N+ K++ A+K +        N+ R    
Sbjct: 5   VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV-F 63
Query: 137 IEIDVLQRLA-------------RHDI---------GGTRYR-----SFPIDLVRELGRQ 169
            E+ ++Q L                D+         G  RY       F  + V+    +
Sbjct: 64  KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE 123
Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           L+ ++ ++   R+IH D+KP+NILL    +V + D+   +           LP+ + I  
Sbjct: 124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM----------LPRETQI-- 171
Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSG 281
                        + +  T+ Y APE+     G G+++  D WS+G    EL  G
Sbjct: 172 -------------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 99  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 17  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLY 75
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 76  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 135
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 136 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 170
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 18  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 76
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 77  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 136
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 137 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 171
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 97  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 99
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 159
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 194
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 120/332 (36%), Gaps = 111/332 (33%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + ++K ++A+K++       E A +E  +     +Q   RH
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 149 DIGGTRYRSF-------------PIDLV-RELGR--------------QLLESVAFMHEL 180
                 Y  F             P+  V REL +              +L  ++++ H  
Sbjct: 65  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
           R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L           
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL----------- 163
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + RV
Sbjct: 164 -----CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
               P             +   GAR                                   
Sbjct: 219 EFTFP------------DFVTEGAR----------------------------------- 231
Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
              DL+  LL+++P++R   RE L HP+ T +
Sbjct: 232 ---DLISRLLKHNPSQRPMLREVLEHPWITAN 260

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 16  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 74
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 75  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 134
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 169
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 95
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 96  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 155
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                    + +F       
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------ANSF------- 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 192 -VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 97  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 76/224 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTT 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                          DL+  LL+++P++R   RE L HP+ T +
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 99  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 99  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 15  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 73
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 74  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 133
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 134 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 168
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 99  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 193
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHD 149
           + +   +G+G+FG+V      +  +  AIK ++     ++   E  M+E  VL     H 
Sbjct: 20  FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 150 IGGTRYRSF--------------------------PIDLVRE--LGRQLLESVAFMHELR 181
                + +F                            DL R      +++  + F+H   
Sbjct: 80  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +++ DLK +NILL    ++K+ D+         G   +N+       L D  +  F    
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKTNEF---- 179
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMER 299
                 T  Y APE++LG  +N+  D WS G +L E+  G++ F  Q  E L H   M+ 
Sbjct: 180 ----CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN 235
Query: 300 VLGP 303
              P
Sbjct: 236 PFYP 239

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 95
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 96  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 155
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 190
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +  +     F N       
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-----FGN------- 167
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
           KL +F               +  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 168 KLDEF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 22  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 80
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 81  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 140
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 141 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 175
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 176 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 76/224 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL SA  +K+ D+           +  + P S    
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXX 168
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +
Sbjct: 169 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 213 TYQETYKRISRVEFTFP------------DFVTEGAR----------------------- 237
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                          DL+  LL+++P++R   RE L HP+ T +
Sbjct: 238 ---------------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 86/234 (36%), Gaps = 66/234 (28%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPDYKFLSRSSKDGSYFKNLPKS 224
           R +  ++ F+H   + H DLKPENIL  S E    VK+ D+                   
Sbjct: 118 RDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDL----------------G 161
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELC 279
           S +KL +   T     + +    +  Y APEV+         ++  CDLWS+G +L  + 
Sbjct: 162 SGMKL-NNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIML 220
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG   F  H                                  GA   W  G   R    
Sbjct: 221 SGYPPFVGH---------------------------------CGADCGWDRGEVCRVCQN 247
Query: 340 AVWKLLR-----LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
            +++ ++      P+    H+   A DLI     LL  D  +RL A + L+HP+
Sbjct: 248 KLFESIQEGKYEFPDKDWAHISSEAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
           RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPNIV 78
Query: 149 ------------------DIGGTRYRS------FPIDLVRELGRQLLESVAFMHELRLIH 184
                               GG  +        F  D  R   +QL+  V++ H +++ H
Sbjct: 79  RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQDH 242
            DLK EN LL                   DGS       +  +K+  FG   ++  H   
Sbjct: 139 RDLKLENTLL-------------------DGS------PAPRLKICAFGYSKSSVLHSQP 173
Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
              V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 174 KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           L  EL  Q+ + V ++H  +LI+ DLKP NI LV  + VK+ D+  ++    DG   ++ 
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS- 181
Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                                     T  Y +PE I    +    DL+++G IL EL
Sbjct: 182 ------------------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
           R L +Q+L  V + H   ++H DLKPEN+LL +    K+ D+  LS    DG + +    
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFLRX--- 174
Query: 224 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 283
                    GS  +   +   V+S R Y  PEV          D+WS G IL  L  G  
Sbjct: 175 -------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSSGVILYALLCGTL 214
Query: 284 LF 285
            F
Sbjct: 215 PF 216

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  P +  R    ++  ++ ++HE  +I+ DLK +N+LL S  ++K+ DY       +
Sbjct: 146 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
            G                  ++TF          T +Y APE++ G  + +  D W++G 
Sbjct: 206 PGD----------------TTSTF--------CGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 274 ILVELCSGEALF 285
           ++ E+ +G + F
Sbjct: 242 LMFEMMAGRSPF 253

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  P +  R    ++  ++ ++HE  +I+ DLK +N+LL S  ++K+ DY       +
Sbjct: 103 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
                              G TT      S    T +Y APE++ G  + +  D W++G 
Sbjct: 163 P------------------GDTT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGV 198
Query: 274 ILVELCSGEALF 285
           ++ E+ +G + F
Sbjct: 199 LMFEMMAGRSPF 210

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 45  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 103
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
             F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 163
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 164 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 198
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 84/228 (36%), Gaps = 64/228 (28%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
           + +  ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L   ++ 
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 152 GTR------YRSFPIDL------------------------------VRELGRQLLESVA 175
             R       +  P DL                              +R L   +  ++ 
Sbjct: 76  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++HE R+IH DLKPENI+L                           P+    K+ID G  
Sbjct: 136 YLHENRIIHRDLKPENIVLQPG------------------------PQRLIHKIIDLGYA 171
Query: 236 TFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
               Q    +  V T  Y APE++    +    D WS G +  E  +G
Sbjct: 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 90/236 (38%), Gaps = 69/236 (29%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---------AMIEIDV 141
           + +Y  +S +G G FG V    D EK + V +K ++      +            +EI +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 142 LQRLARHDI---------------------GGTRYRSFPID--------LVRELGRQLLE 172
           L R+   +I                      G    +F ID        L   + RQL+ 
Sbjct: 83  LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAF-IDRHPRLDEPLASYIFRQLVS 141
Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
           +V ++    +IH D+K ENI++         D+                     IKLIDF
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAE-------DF--------------------TIKLIDF 174
Query: 233 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 285
           GS  +  +   +     T  Y APEV++G  +  P  ++WS+G  L  L   E  F
Sbjct: 175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 84/228 (36%), Gaps = 64/228 (28%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
           + +  ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L   ++ 
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 152 GTR------YRSFPIDL------------------------------VRELGRQLLESVA 175
             R       +  P DL                              +R L   +  ++ 
Sbjct: 77  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++HE R+IH DLKPENI+L                           P+    K+ID G  
Sbjct: 137 YLHENRIIHRDLKPENIVLQPG------------------------PQRLIHKIIDLGYA 172
Query: 236 TFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
               Q    +  V T  Y APE++    +    D WS G +  E  +G
Sbjct: 173 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 111/284 (39%), Gaps = 72/284 (25%)
Query: 48  GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
           GN G+    C  +   ++P   S P +P +KD   +        PR   ++  K+G G F
Sbjct: 157 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 201
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---------------- 149
           G+V     N K   VA+K ++  +   EA + E +V++ L +HD                
Sbjct: 202 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTKEPIYI 259
Query: 150 -------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 196
                        +        P+  + +   Q+ E +AF+ +   IH DL+  NIL+ +
Sbjct: 260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 319
Query: 197 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 256
           +   K+ D+  L+R  +D  Y         IK                      + APE 
Sbjct: 320 SLVCKIADFG-LARVIEDNEYTAREGAKFPIK----------------------WTAPEA 356
Query: 257 ILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
           I    +    D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +                  
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
                   TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 162 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +                  
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
                   TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 162 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +                  
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
                   TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 162 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  P +  R    ++  ++ ++HE  +I+ DLK +N+LL S  ++K+ DY       +
Sbjct: 99  RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 158
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
                              G TT      S    T +Y APE++ G  + +  D W++G 
Sbjct: 159 P------------------GDTT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGV 194
Query: 274 ILVELCSGEALF 285
           ++ E+ +G + F
Sbjct: 195 LMFEMMAGRSPF 206

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 154 RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 213
           R R  P +  R    ++  ++ ++HE  +I+ DLK +N+LL S  ++K+ DY       +
Sbjct: 114 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 173
Query: 214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
                              G TT      S    T +Y APE++ G  + +  D W++G 
Sbjct: 174 P------------------GDTT------SXFCGTPNYIAPEILRGEDYGFSVDWWALGV 209
Query: 274 ILVELCSGEALF 285
           ++ E+ +G + F
Sbjct: 210 LMFEMMAGRSPF 221

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +  +     F N       
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT-----FGN------- 167
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
           KL  F                  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 168 KLDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 215 G-QNLKEL--RERVL 226

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
             T  Y +   +G G++     C         A+KI   I+K +     EI++L R  +H
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 ----------DIGGTRYRSFPI----DLVRELGRQ--------------LLESVAFMHEL 180
                     D G   Y    +    +L+ ++ RQ              + ++V ++H  
Sbjct: 76  PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLKP NIL                       Y        +I++ DFG       
Sbjct: 136 GVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAKQLRA 172
Query: 241 DHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           ++  + +   T ++ APEV+   G++  CD+WS+G +L    +G   F
Sbjct: 173 ENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 61/217 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRY 155
           +GEG+F   V   +       AIKI+  R I K  +   +  E DV+ RL  H      Y
Sbjct: 38  LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 156 RSFPID-----------------LVRELGR-----------QLLESVAFMHELRLIHTDL 187
            +F  D                  +R++G            +++ ++ ++H   +IH DL
Sbjct: 97  FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 188 KPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           KPENILL    ++++ D+   K LS  SK                             + 
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------------------ANX 191
Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 83/243 (34%), Gaps = 80/243 (32%)
Query: 153 TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 212
            R + F  +  R    Q++  + ++H   ++H DL   N+LL                  
Sbjct: 104 NRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT----------------- 146
Query: 213 KDGSYFKNLPKSSAIKLIDFGSTT---FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 269
                     ++  IK+ DFG  T     H+ H  +  T +Y +PE+          D+W
Sbjct: 147 ----------RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVW 196
Query: 270 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 329
           S+GC+   L  G   F T          + V   L  + V+ AD     +    A+    
Sbjct: 197 SLGCMFYTLLIGRPPFDT----------DTVKNTL--NKVVLADYEMPSFLSIEAK---- 240
Query: 330 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                                             DL+  LLR +PA+RL     L HPF 
Sbjct: 241 ----------------------------------DLIHQLLRRNPADRLSLSSVLDHPFM 266
Query: 390 TRD 392
           +R+
Sbjct: 267 SRN 269

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +                  
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 154
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
                   TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 155 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 208 G-QNLKELR--ERVL 219

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 24/99 (24%)
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H DLKP N+ L   + VK+ D+      + D S+ K                TF    
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK----------------TF---- 176
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
               V T +Y +PE +  + +N   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
            P D+ R    +++ ++  +H+L  +H D+KP+N+LL    ++++ D+            
Sbjct: 188 LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF------------ 235
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVG 272
                  S +K+ D G+        S  V T  Y +PE++     G+G   P CD WS+G
Sbjct: 236 ------GSCLKMNDDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 284
Query: 273 CILVELCSGEALFQTHENLE 292
             + E+  GE  F     +E
Sbjct: 285 VCMYEMLYGETPFYAESLVE 304

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
            P D+ R    +++ ++  +H+L  +H D+KP+N+LL    ++++ D+            
Sbjct: 172 LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF------------ 219
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVG 272
                  S +K+ D G+        S  V T  Y +PE++     G+G   P CD WS+G
Sbjct: 220 ------GSCLKMNDDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 268
Query: 273 CILVELCSGEALFQTHENLE 292
             + E+  GE  F     +E
Sbjct: 269 VCMYEMLYGETPFYAESLVE 288

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +                  
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
                   TF ++  ++      Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 162 ------EFTFGNKLDAF-CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           RQ++ +V + H+  ++H DLK EN+LL     +K+ D+ F S     G+       S   
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGF-SNEFTVGNKLDTFCGSPP- 178
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 286
                                  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 179 -----------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Query: 287 THENLEHLAMMERVL 301
             +NL+ L   ERVL
Sbjct: 216 G-QNLKELR--ERVL 227

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 81/229 (35%), Gaps = 76/229 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL S   +K+ D+           +  + P S    
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADF----------GWSVHAPSSRRTT 169
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
           L                  T  Y  PE+I G   +   DLWS+G +  E   G   F+ H
Sbjct: 170 L----------------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
              E    + RV    P             +   GAR                       
Sbjct: 214 TYQETYRRISRVEFTFP------------DFVTEGAR----------------------- 238
Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL+  LL+++ ++RL   E L HP+   +  +P+
Sbjct: 239 ---------------DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q LE + ++H  R++H D+K +N+LL                 S DGS+           
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLL-----------------SSDGSH---------AA 207
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
           L DFG       D          Y+  T  + APEV+LG   +   D+WS  C+++ + +
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 281 G 281
           G
Sbjct: 268 G 268

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q LE + ++H  R++H D+K +N+LL                 S DGS+           
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLL-----------------SSDGSH---------AA 226
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
           L DFG       D          Y+  T  + APEV+LG   +   D+WS  C+++ + +
Sbjct: 227 LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
Query: 281 G 281
           G
Sbjct: 287 G 287

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 24/99 (24%)
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H DLKP N+ L   + VK+ D+      + D S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-------------------- 176
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
               V T +Y +PE +  + +N   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 51/248 (20%)
Query: 156 RSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
           +  P +++ ++   +L  +A++ E  +++H D+KP NIL+ S   +K+ D+         
Sbjct: 109 KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV------- 161
Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
                      + +LID  + +F        V TR Y APE + G  ++   D+WS+G  
Sbjct: 162 -----------SGQLIDSMANSF--------VGTRSYMAPERLQGTHYSVQSDIWSMGLS 202
Query: 275 LVELCSGEALFQTHENLEHLAMMER--VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 332
           LVEL  G       +  E  A+  R  V G       I    R       G  +D     
Sbjct: 203 LVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMD----- 257
Query: 333 TSRDSMRAVWKLL---------RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA 383
            SR +M A+++LL         +LPN +         D  + +   L  +PAER   +  
Sbjct: 258 -SRPAM-AIFELLDYIVNEPPPKLPNGVF------TPDFQEFVNKCLIKNPAERADLKML 309
Query: 384 LRHPFFTR 391
             H F  R
Sbjct: 310 TNHTFIKR 317

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 27/128 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           FP  + +    ++  ++ ++H   +I+ DLKPENILL                       
Sbjct: 103 FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----------------------- 139
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
                K+  IK+ DFG   +       +  T  Y APEV+    +N   D WS G ++ E
Sbjct: 140 ----DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 195
Query: 278 LCSGEALF 285
           + +G   F
Sbjct: 196 MLAGYTPF 203

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 147/375 (39%), Gaps = 88/375 (23%)
Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQV---VECFDNEKKELVAIK-IVRSINKYRE 133
           KD   ++     L+  ++I  K+GEGTF  V           +E +A+K ++ + +  R 
Sbjct: 7   KDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRI 66
Query: 134 AAMIEIDVLQRLARHD-IGGTRY------------------------RSFPIDLVRELGR 168
           AA  E+  L      D + G +Y                         S     VRE   
Sbjct: 67  AA--ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYML 124
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
            L +++  +H+  ++H D+KP N L       ++  Y  +      G++       + I+
Sbjct: 125 NLFKALKRIHQFGIVHRDVKPSNFLYNR----RLKKYALVDFGLAQGTH------DTKIE 174
Query: 229 LIDFGSTTFEH----QDHSYVVSTRH-----------YRAPEVILGL-GWNYPCDLWSVG 272
           L+ F  +  +     Q+   +  +R            +RAPEV+          D+WS G
Sbjct: 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234
Query: 273 CILVELCSGE-ALFQTHENLEHLAMMERVLGPLPHHMVIRADR---RAEKYFRRGARLDW 328
            I + L SG    ++  ++L  LA +          M IR  R   +A K F  G  +  
Sbjct: 235 VIFLSLLSGRYPFYKASDDLTALAQI----------MTIRGSRETIQAAKTF--GKSILC 282
Query: 329 PDGATSRDSMRAVWKLLR--------LPNLIMQHVDHSAG------DLIDLLQGLLRYDP 374
                ++D +R + + LR        L + I  H  +  G      +  DLL  LL  +P
Sbjct: 283 SKEVPAQD-LRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNP 341
Query: 375 AERLKAREALRHPFF 389
           A R+ A EAL HPFF
Sbjct: 342 ASRITAEEALLHPFF 356

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 80/230 (34%), Gaps = 78/230 (33%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           +L  ++++ H  R+IH D+KPEN+LL S                           +  +K
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGS---------------------------NGELK 152
Query: 229 LIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           + DFG S          +  T  Y  PE+I G   +   DLWS+G +  E   G   F+ 
Sbjct: 153 IADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
           H   E    + RV    P             +   GAR                      
Sbjct: 213 HTYQETYRRISRVEFTFP------------DFVTEGAR---------------------- 238
Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                           DL+  LL+++ ++RL   E L HP+   +  +P+
Sbjct: 239 ----------------DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 27/121 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSA 226
           +Q+LE + ++H+ +++H D+K +N+L+ +   V K+ D+    R                
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR---------------- 172
Query: 227 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEAL 284
           +  I+  + TF          T  Y APE+I     G+    D+WS+GC ++E+ +G+  
Sbjct: 173 LAGINPCTETF--------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
Query: 285 F 285
           F
Sbjct: 225 F 225

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 145 LARHDIGGTRYRSFPID--LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 202
           + +H +    ++S  +D   +  + R++LE + ++H+   IH D+K  NILL     V++
Sbjct: 98  IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 157
Query: 203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-G 261
            D+   +  +  G   +N  +            TF        V T  + APEV+  + G
Sbjct: 158 ADFGVSAFLATGGDITRNKVRK-----------TF--------VGTPCWMAPEVMEQVRG 198
Query: 262 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           +++  D+WS G   +EL +G A +  +  ++ L +
Sbjct: 199 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 233

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 145 LARHDIGGTRYRSFPID--LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 202
           + +H +    ++S  +D   +  + R++LE + ++H+   IH D+K  NILL     V++
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162
Query: 203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-G 261
            D+   +  +  G   +N  +            TF        V T  + APEV+  + G
Sbjct: 163 ADFGVSAFLATGGDITRNKVRK-----------TF--------VGTPCWMAPEVMEQVRG 203
Query: 262 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           +++  D+WS G   +EL +G A +  +  ++ L +
Sbjct: 204 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 27/121 (22%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSA 226
           +Q+LE + ++H+ +++H D+K +N+L+ +   V K+ D+                  S  
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG----------------TSKR 158
Query: 227 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEAL 284
           +  I+  + TF          T  Y APE+I     G+    D+WS+GC ++E+ +G+  
Sbjct: 159 LAGINPCTETF--------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
Query: 285 F 285
           F
Sbjct: 211 F 211

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 60/236 (25%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQR----- 144
           + IL  +G G FG+V         ++ A+KI+      + A       E DVL       
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 145 ----------------LARHDIGG---TRYRSFPIDLVRELGR----QLLESVAFMHELR 181
                           +  + +GG   T    F   L  E+ R    +++ ++  +H+L 
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
            +H D+KP+NIL+    ++++ D+                   S +KL++ G+       
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGTV-----Q 232
Query: 242 HSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLE 292
            S  V T  Y +PE++  +      +   CD WS+G  + E+  GE  F     +E
Sbjct: 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H DLKP N+ L   + VK+ D+      + D  + K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-------------------- 176
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
               V T +Y +PE +  + +N   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 60/210 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF- 158
           +G G FG V  C    + + VAIK + S ++ R+A ++E+  L R+   +I         
Sbjct: 17  VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 159 PIDLVRELGR---------------------------QLLESVAFMHELR---LIHTDLK 188
           P+ LV E                              Q  + VA++H ++   LIH DLK
Sbjct: 74  PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 133
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
           P N+LLV+                            + +K+ DFG+        +    +
Sbjct: 134 PPNLLLVAG--------------------------GTVLKICDFGTACDIQTHMTNNKGS 167
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
             + APEV  G  ++  CD++S G IL E+
Sbjct: 168 AAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 60/210 (28%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRYRSF- 158
           +G G FG V  C    + + VAIK + S ++ R+A ++E+  L R+   +I         
Sbjct: 16  VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 159 PIDLVRELGR---------------------------QLLESVAFMHELR---LIHTDLK 188
           P+ LV E                              Q  + VA++H ++   LIH DLK
Sbjct: 73  PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
           P N+LLV+                            + +K+ DFG+        +    +
Sbjct: 133 PPNLLLVAG--------------------------GTVLKICDFGTACDIQTHMTNNKGS 166
Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
             + APEV  G  ++  CD++S G IL E+
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 113/284 (39%), Gaps = 82/284 (28%)
Query: 48  GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
           GN G+    C  +   ++P   S P +P +KD   +        PR   ++  K+G G F
Sbjct: 151 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 195
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---------------- 149
           G+V     N K   VA+K ++  +   EA + E +V++ L +HD                
Sbjct: 196 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTKEPIYI 253
Query: 150 -------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 196
                        +        P+  + +   Q+ E +AF+ +   IH DL+  NIL+ +
Sbjct: 254 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 313
Query: 197 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 256
           +   K+ D+      ++ G+ F    K +A + I+FGS T +                  
Sbjct: 314 SLVCKIADFGL----ARVGAKFP--IKWTAPEAINFGSFTIK------------------ 349
Query: 257 ILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                     D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 350 ---------SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 65
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 159
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 87/218 (39%), Gaps = 64/218 (29%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARH---- 148
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 59  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTI 117
Query: 149 DIGGTRYRSFPIDLVRE--LGRQ----------------------LLESVAFMHELRLIH 184
              G   R     LV E  LG                         L+ +A++H   +IH
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NIL                           L +   +KL DFGS +     + +
Sbjct: 178 RDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMAPANXF 210
Query: 245 VVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 279
            V T ++ APEVIL +    ++   D+WS+G   +EL 
Sbjct: 211 -VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 59/217 (27%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
           +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L    I   
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI--I 96
Query: 154 RYRS----------------FPIDLVRE--------------LGRQLLESVAFMHELRLI 183
           +Y+                  P+  +R+                +Q+ E +A++H    I
Sbjct: 97  KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYI 156
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DL   N+LL +   VK+ D+  L+++  +G     + +       D  S  F      
Sbjct: 157 HRDLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEXYRVRE-------DGDSPVF------ 202
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                  + APE +    + Y  D+WS G  L EL +
Sbjct: 203 -------WYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 56/231 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
           +  L  +G+G+FG+V+       +EL AIKI++      +   E  M+E  VL  L +  
Sbjct: 21  FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
                H    T  R + +       DL   ++++G+           ++   + F+H+  
Sbjct: 81  FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N++L S  ++K+ D+        D                  G TT E   
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD------------------GVTTRE--- 179
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                 T  Y APE+I    +    D W+ G +L E+ +G+  F   +  E
Sbjct: 180 ---FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 87/218 (39%), Gaps = 64/218 (29%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARH---- 148
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTI 78
Query: 149 DIGGTRYRSFPIDLVRE--LGRQ----------------------LLESVAFMHELRLIH 184
              G   R     LV E  LG                         L+ +A++H   +IH
Sbjct: 79  QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K  NIL                           L +   +KL DFGS +     + +
Sbjct: 139 RDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMAPANXF 171
Query: 245 VVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 279
            V T ++ APEVIL +    ++   D+WS+G   +EL 
Sbjct: 172 -VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 59/215 (27%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
           +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L    I   
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI--I 79
Query: 154 RYRS----------------FPIDLVRE--------------LGRQLLESVAFMHELRLI 183
           +Y+                  P+  +R+                +Q+ E +A++H    I
Sbjct: 80  KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYI 139
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H +L   N+LL +   VK+ D+  L+++  +G  +  + +       D  S  F      
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 185
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                  + APE +    + Y  D+WS G  L EL
Sbjct: 186 -------WYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 88/241 (36%), Gaps = 84/241 (34%)
Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           L+  + RQ+  ++ ++H   + H D+KPEN L  +                         
Sbjct: 169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN------------------------ 204
Query: 222 PKSSAIKLIDFG-STTF------EHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVG 272
            KS  IKL+DFG S  F      E+   +    T ++ APEV+     +Y   CD WS G
Sbjct: 205 -KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 273 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 332
            +L                 HL +M  V  P P                         G 
Sbjct: 264 VLL-----------------HLLLMGAV--PFP-------------------------GV 279
Query: 333 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI--DLLQGLLRYDPAERLKAREALRHPFFT 390
              D++  V        L  ++ +++    +  DLL  LL  +  ER  A  AL+HP+ +
Sbjct: 280 NDADTISQVLN----KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335
Query: 391 R 391
           +
Sbjct: 336 Q 336

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI +   L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNHENV 67
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 161
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/334 (20%), Positives = 117/334 (35%), Gaps = 109/334 (32%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM------IEIDVLQR--- 144
           + I+  +G+G FG V    + + K ++A+K++      +E         IEI    R   
Sbjct: 16  FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 145 -LARHDIGGTRYRSFPI-------DLVRELGR--------------QLLESVAFMHELRL 182
            L  ++    R R + +       +L +EL +              +L +++ + HE ++
Sbjct: 76  ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 241
           IH D+KPEN+L+          YK                    +K+ DFG S       
Sbjct: 136 IHRDIKPENLLM---------GYK------------------GELKIADFGWSVHAPSLR 168
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
              +  T  Y  PE+I G   +   DLW  G +  E   G   F +  + E         
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--------- 219
Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
               H  ++  D +   +   G++                                    
Sbjct: 220 ---THRRIVNVDLKFPPFLSDGSK------------------------------------ 240
Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
             DL+  LLRY P +RL  +  + HP+   + RR
Sbjct: 241 --DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 59/215 (27%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
           +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L    I   
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI--I 79
Query: 154 RYRS----------------FPIDLVRE--------------LGRQLLESVAFMHELRLI 183
           +Y+                  P+  +R+                +Q+ E +A++H    I
Sbjct: 80  KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYI 139
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H +L   N+LL +   VK+ D+  L+++  +G  +  + +       D  S  F      
Sbjct: 140 HRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 185
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                  + APE +    + Y  D+WS G  L EL
Sbjct: 186 -------WYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
           D++R L +Q+LE V ++H+  ++H DLKP+NILL S                        
Sbjct: 132 DVIR-LIKQILEGVYYLHQNNIVHLDLKPQNILLSS------------------------ 166
Query: 221 LPKSSAIKLIDFG-STTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
           +     IK++DFG S    H  +   ++ T  Y APE++         D+W++G I   L
Sbjct: 167 IYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYML 226
Query: 279 CSGEALFQTHENLEHLAMMERV 300
            +  + F   +N E    + +V
Sbjct: 227 LTHTSPFVGEDNQETYLNISQV 248

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 56/231 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
           +  L  +G+G+FG+V+        EL A+KI++      +   E  M+E  VL    +  
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
                H    T  R + +       DL   ++++GR           ++   + F+    
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N++L S  ++K+ D+     +  DG   K                      
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-------------------- 502
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                 T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E
Sbjct: 503 ----CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 59/215 (27%)
Query: 99  KMGEGTFGQVVECFDNEK----------------KELVAI------KIVRSINKYREAAM 136
           ++G G+FG+V    D +                 +ELVA       +IV      RE   
Sbjct: 79  RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 138
Query: 137 IEIDVLQRLARHDIGG--TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 194
           + I  ++ L    +G    +    P D       Q LE + ++H  R++H D+K +N+LL
Sbjct: 139 VNI-FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 197
Query: 195 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--------SYVV 246
                            S DGS            L DFG       D          Y+ 
Sbjct: 198 -----------------SSDGSR---------AALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            T  + APEV++G   +   D+WS  C+++ + +G
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 84/234 (35%), Gaps = 66/234 (28%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           + +  ++ F+H   + H DLKPENIL         VK+ D+   S    +G      P S
Sbjct: 118 QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS---PIS 174
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELC 279
           +   L   GS                Y APEV+         ++  CDLWS+G IL  L 
Sbjct: 175 TPELLTPCGSA--------------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG   F                                   R G+   W  G        
Sbjct: 221 SGYPPF---------------------------------VGRCGSDCGWDRGEACPACQN 247
Query: 340 AVWKLLR-----LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
            +++ ++      P+    H+  +A DLI     LL  D  +RL A + L+HP+
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLI---SKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 56/231 (24%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLAR-- 147
           +  L  +G+G+FG+V+        EL A+KI++      +   E  M+E  VL    +  
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 148 -----HDIGGTRYRSFPI-------DL---VRELGR-----------QLLESVAFMHELR 181
                H    T  R + +       DL   ++++GR           ++   + F+    
Sbjct: 82  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N++L S  ++K+ D+     +  DG   K                      
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-------------------- 181
Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                 T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E
Sbjct: 182 ----CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 49/140 (35%)
Query: 161 DLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           D V ++  Q   +V  MH  +  +IH DLK EN+LL                 S  G+  
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL-----------------SNQGT-- 176
Query: 219 KNLPKSSAIKLIDFGS-TTFEHQ-DHSYVV-------------STRHYRAPEVILGLGWN 263
                   IKL DFGS TT  H  D+S+               +T  YR PE+I  L  N
Sbjct: 177 --------IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII-DLYSN 227
Query: 264 YPC----DLWSVGCILVELC 279
           +P     D+W++GCIL  LC
Sbjct: 228 FPIGEKQDIWALGCILYLLC 247

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 84/234 (35%), Gaps = 66/234 (28%)
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           + +  ++ F+H   + H DLKPENIL         VK+ D+   S    +G      P S
Sbjct: 118 QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS---PIS 174
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELC 279
           +   L   GS                Y APEV+         ++  CDLWS+G IL  L 
Sbjct: 175 TPELLTPCGSA--------------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           SG   F                                   R G+   W  G        
Sbjct: 221 SGYPPF---------------------------------VGRCGSDCGWDRGEACPACQN 247
Query: 340 AVWKLLR-----LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
            +++ ++      P+    H+  +A DLI     LL  D  +RL A + L+HP+
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q LE + ++H  R++H D+K +N+LL                 S DGS            
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLL-----------------SSDGSR---------AA 191
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
           L DFG       D          Y+  T  + APEV++G   +   D+WS  C+++ + +
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 251
Query: 281 G 281
           G
Sbjct: 252 G 252

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 34/121 (28%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q LE + ++H  R++H D+K +N+LL                 S DGS            
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLL-----------------SSDGSR---------AA 207
Query: 229 LIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
           L DFG       D          Y+  T  + APEV++G   +   D+WS  C+++ + +
Sbjct: 208 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 267
Query: 281 G 281
           G
Sbjct: 268 G 268

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 62/247 (25%)
Query: 85  AIGENLTPR-----YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAA 135
            IG N + R     +  +  +G+G+FG+V+     E  +L A+K+++      +   E  
Sbjct: 11  GIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 136 MIEIDVLQRLARHDI----------------------GG------TRYRSFPIDLVRELG 167
           M E  +L     H                        GG       + R F     R   
Sbjct: 71  MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
            +++ ++ F+H+  +I+ DLK +N+LL    + K+ D+       K+G            
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM----CKEG------------ 174
Query: 228 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
             I  G TT      +    T  Y APE++  + +    D W++G +L E+  G A F+ 
Sbjct: 175 --ICNGVTT------ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
Query: 288 HENLEHL 294
            EN + L
Sbjct: 227 -ENEDDL 232

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 62/224 (27%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG  G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENV 66
Query: 151 ---------------------GGTRYRSFPIDL------VRELGRQLLESVAFMHELRLI 183
                                GG  +     D+       +    QL+  V ++H + + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+                            +T F + +  
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGL--------------------------ATVFRYNNRE 160
Query: 244 YVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 282
            +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 26  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 85  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D  Y         IK                  
Sbjct: 145 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 185
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 186 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 235
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 236 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 273

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++  K+G G FG+V     N K   VA+K ++  +   EA + E +V++ L +HD     
Sbjct: 18  KLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKL 75
Query: 150 ------------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
                                   +        P+  + +   Q+ E +AF+ +   IH 
Sbjct: 76  HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 135
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+ ++   K+ D+  L+R  +D  Y         IK                 
Sbjct: 136 DLRAANILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIK----------------- 177
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE I    +    D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 178 -----WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 81  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D  Y         IK                  
Sbjct: 141 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 181
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 182 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 231
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 232 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 85/226 (37%), Gaps = 67/226 (29%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDI-- 150
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 151 --------GG-----TRY-----------RSFPIDLVRELGR------------QLLESV 174
                   GG     T Y           R    DL +E GR            Q+ + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
           AF+     IH D+   N+LL +    K+ D+        D +Y         +K      
Sbjct: 174 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------ 227
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                           + APE I    +    D+WS G +L E+ S
Sbjct: 228 ----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 85/226 (37%), Gaps = 67/226 (29%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDI-- 150
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 151 --------GG-----TRY-----------RSFPIDLVRELGR------------QLLESV 174
                   GG     T Y           R    DL +E GR            Q+ + +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
           AF+     IH D+   N+LL +    K+ D+        D +Y         +K      
Sbjct: 166 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------ 219
Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                           + APE I    +    D+WS G +L E+ S
Sbjct: 220 ----------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 21  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 80  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D  Y         IK                  
Sbjct: 140 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 180
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 181 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 230
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 231 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 268

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 213
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 214 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 256
Query: 277 ELCSG 281
           E+  G
Sbjct: 257 EMAVG 261

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 75  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D  Y         IK                  
Sbjct: 135 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 175
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 176 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 225
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 226 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H + LIH D+KP+N+LL    ++K+ D+                   + +K+ + G   
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADF------------------GTCMKMDETGMV- 230
Query: 237 FEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 285
             H D +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 231 --HCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 87/231 (37%), Gaps = 54/231 (23%)
Query: 98  SKMGEGTFGQVV--------------------ECFDNEKKELVAIKIVRSINKYREAAMI 137
           +++G G+FG V                     E F   + E+  ++  R +N       +
Sbjct: 42  TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 138 EIDVLQRLARHDIGGTRYR-------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE 190
             D L  + +   G + Y+        F +  + ++ RQ  + + ++H   +IH D+K  
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSN 161
Query: 191 NILLVSAEYVKVPDYKFLSRSSK-DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR 249
           NI L     VK+ D+   +  S+  GS     P  S +                      
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL---------------------- 199
Query: 250 HYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
            + APEVI     N   +  D++S G +L EL +GE  +    N + +  M
Sbjct: 200 -WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 11  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 70  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D  Y         IK                  
Sbjct: 130 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 170
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 171 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 220
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 221 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 258

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/328 (20%), Positives = 114/328 (34%), Gaps = 109/328 (33%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM------IEIDVLQR----LARHD 149
           +G+G FG V    + + K ++A+K++      +E         IEI    R    L  ++
Sbjct: 23  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 150 IGGTRYRSFPI-------DLVRELGR--------------QLLESVAFMHELRLIHTDLK 188
               R R + +       +L +EL +              +L +++ + HE ++IH D+K
Sbjct: 83  YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 142
Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVS 247
           PEN+L+          YK                    +K+ DFG S          +  
Sbjct: 143 PENLLM---------GYK------------------GELKIADFGWSVHAPSLRRRXMCG 175
Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHH 307
           T  Y  PE+I G   +   DLW  G +  E   G   F +  + E             H 
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------------THR 223
Query: 308 MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ 367
            ++  D +   +   G++                                      DL+ 
Sbjct: 224 RIVNVDLKFPPFLSDGSK--------------------------------------DLIS 245
Query: 368 GLLRYDPAERLKAREALRHPFFTRDVRR 395
            LLRY P +RL  +  + HP+   + RR
Sbjct: 246 KLLRYHPPQRLPLKGVMEHPWVKANSRR 273

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 176
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 177 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 221
Query: 277 ELCSG 281
           E+  G
Sbjct: 222 EMAVG 226

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 168
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 169 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 213
Query: 277 ELCSG 281
           E+  G
Sbjct: 214 EMAVG 218

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 43/154 (27%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
           D++  ++ +D+        P    R    +++ ++  +H +  IH D+KP+N+LL     
Sbjct: 155 DLVNLMSNYDV--------PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----- 201
Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPE 255
                                  KS  +KL DFG+    +++        V T  Y +PE
Sbjct: 202 ----------------------DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 239
Query: 256 VILGLG----WNYPCDLWSVGCILVELCSGEALF 285
           V+   G    +   CD WSVG  L E+  G+  F
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 41/209 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDI---GGTRY 155
           +G+G FGQ ++    E  E++ +K ++R   + +   + E+ V++ L   ++    G  Y
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 156 RSFPIDLVRE-------------------------LGRQLLESVAFMHELRLIHTDLKPE 190
           +   ++ + E                           + +   +A++H + +IH DL   
Sbjct: 78  KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSH 137
Query: 191 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS-SAIKLIDFGSTTFEHQDHSYVVSTR 249
           N L+   + V V D+  L+R   D    K  P+   ++K  D        +    VV   
Sbjct: 138 NCLVRENKNVVVADFG-LARLMVDE---KTQPEGLRSLKKPD-------RKKRYTVVGNP 186
Query: 250 HYRAPEVILGLGWNYPCDLWSVGCILVEL 278
           ++ APE+I G  ++   D++S G +L E+
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 35/150 (23%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
           D++  ++ +D+        P    R    +++ ++  +H +  IH D+KP+N+LL  + +
Sbjct: 160 DLVNLMSNYDV--------PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH 211
Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG 259
           +K+ D+    + +K+G     + +                      V T  Y +PEV+  
Sbjct: 212 LKLADFGTCMKMNKEG-----MVRCDT------------------AVGTPDYISPEVLKS 248
Query: 260 LG----WNYPCDLWSVGCILVELCSGEALF 285
            G    +   CD WSVG  L E+  G+  F
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 35/150 (23%)
Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
           D++  ++ +D+        P    R    +++ ++  +H +  IH D+KP+N+LL  + +
Sbjct: 160 DLVNLMSNYDV--------PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH 211
Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG 259
           +K+ D+    + +K+G     + +                      V T  Y +PEV+  
Sbjct: 212 LKLADFGTCMKMNKEG-----MVRCDT------------------AVGTPDYISPEVLKS 248
Query: 260 LG----WNYPCDLWSVGCILVELCSGEALF 285
            G    +   CD WSVG  L E+  G+  F
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 60/235 (25%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           PI L+R    Q+   VA +H L++IH DLKP+NIL+ ++        +F +         
Sbjct: 135 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 183
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCI 274
           + L     + K +D G   F   + +    T  +RAPE++            D++S+GC+
Sbjct: 184 RILISDFGLCKKLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
              + S                     G  P           +KY R    +    G  S
Sbjct: 243 FYYILSK--------------------GKHPF---------GDKYSRESNII---RGIFS 270
Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            D M+ +            H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 271 LDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 60/235 (25%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           PI L+R    Q+   VA +H L++IH DLKP+NIL+ ++        +F +         
Sbjct: 135 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 183
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCI 274
           + L     + K +D G   F    ++    T  +RAPE++            D++S+GC+
Sbjct: 184 RILISDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCV 242
Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
              + S                     G  P           +KY R    +    G  S
Sbjct: 243 FYYILSK--------------------GKHPF---------GDKYSRESNII---RGIFS 270
Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            D M+ +            H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 271 LDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 64/239 (26%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           PI L+R    Q+   VA +H L++IH DLKP+NIL+ ++        +F +         
Sbjct: 117 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 165
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWS 270
           + L     + K +D G ++F   + +    T  +RAPE++                D++S
Sbjct: 166 RILISDFGLCKKLDSGQSSF-RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
           +GC+   + S                     G  P           +KY R    +    
Sbjct: 225 MGCVFYYILSK--------------------GKHPF---------GDKYSRESNII---R 252
Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           G  S D M+ +            H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 253 GIFSLDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    +++  +  MH   +++ DLKP NILL    +V++ D            + K  P
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 347
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
            +S                    V T  Y APEV+  G+ ++   D +S+GC+L +L  G
Sbjct: 348 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 282 EALFQTHEN 290
            + F+ H+ 
Sbjct: 388 HSPFRQHKT 396

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    +++  +  MH   +++ DLKP NILL    +V++ D            + K  P
Sbjct: 293 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 346
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
            +S                    V T  Y APEV+  G+ ++   D +S+GC+L +L  G
Sbjct: 347 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
Query: 282 EALFQTHEN 290
            + F+ H+ 
Sbjct: 387 HSPFRQHKT 395

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 151
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 152 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
           E+  G
Sbjct: 195 EMAVG 199

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 151
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 152 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
           E+  G
Sbjct: 195 EMAVG 199

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++  N   EA + E  V+++L RH+     
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKL-RHEKLVQL 245
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 246 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L R  +D  Y         IK                 
Sbjct: 306 DLRAANILVGENLVCKVADFG-LGRLIEDNEYTARQGAKFPIK----------------- 347
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 348 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 151
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 152 ---------SGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
           E+  G
Sbjct: 195 EMAVG 199

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    +++  +  MH   +++ DLKP NILL    +V++ D            + K  P
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 347
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
            +S                    V T  Y APEV+  G+ ++   D +S+GC+L +L  G
Sbjct: 348 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 282 EALFQTHEN 290
            + F+ H+ 
Sbjct: 388 HSPFRQHKT 396

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           +R    +++  +  MH   +++ DLKP NILL    +V++ D            + K  P
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKP 347
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSG 281
            +S                    V T  Y APEV+  G+ ++   D +S+GC+L +L  G
Sbjct: 348 HAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 282 EALFQTHEN 290
            + F+ H+ 
Sbjct: 388 HSPFRQHKT 396

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 149
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 150 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
           E+  G
Sbjct: 195 EMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 149
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  + +F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 150 -------GVSGQLIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194
Query: 277 ELCSG 281
           E+  G
Sbjct: 195 EMAVG 199

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92  PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
           PR R+     +G G FG+VVE        ++    VA+K+++       REA M E+ VL
Sbjct: 21  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
             L  H           IGG     T Y  +  DL+  L R                   
Sbjct: 81  SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
                        Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+ 
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 197
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
                                    D +YVV         + APE I    + +  D+WS
Sbjct: 198 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
            G  L EL S                    LG  P+   +  D +  K  + G R+  P+
Sbjct: 233 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 271
Query: 331 GATSR--DSMRAVW 342
            A +   D M+  W
Sbjct: 272 HAPAEMYDIMKTCW 285

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 61/234 (26%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA-----MIEIDVLQRLARH 148
           ++ LS++G G++G+V +    E   L A+K  RS++ +R        + E+   +++ +H
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 149 ----------DIGGTRY------------------RSFPIDLVRELGRQLLESVAFMHEL 180
                     + GG  Y                   S P   V    R  L ++A +H  
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            L+H D+KP NI L      K+ D+  L                  ++L   G+   +  
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLL------------------VELGTAGAGEVQEG 218
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
           D  Y+       APE++ G  +    D++S+G  ++E+     L    E  + L
Sbjct: 219 DPRYM-------APELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 102/267 (38%), Gaps = 67/267 (25%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
           +GEG FG+V + C+D   +   E+VA+K ++     + R     EI++L+ L    I   
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI--V 74
Query: 154 RYRSF-------PIDLVRE-----------------------LGRQLLESVAFMHELRLI 183
           +Y+          + LV E                         +Q+ E +A++H    I
Sbjct: 75  KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYI 134
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H  L   N+LL +   VK+ D+  L+++  +G  +  + +       D  S  F      
Sbjct: 135 HRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 180
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
                  + APE +    + Y  D+WS G  L EL     L     N         ++G 
Sbjct: 181 -------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPHTKFTELIGH 228
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPD 330
               M +    R  +   RG RL  PD
Sbjct: 229 TQGQMTV---LRLTELLERGERLPRPD 252

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92  PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
           PR R+     +G G FG+VVE        ++    VA+K+++       REA M E+ VL
Sbjct: 39  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 98
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
             L  H           IGG     T Y  +  DL+  L R                   
Sbjct: 99  SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
                        Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+ 
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 215
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
                                    D +YVV         + APE I    + +  D+WS
Sbjct: 216 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
            G  L EL S                    LG  P+   +  D +  K  + G R+  P+
Sbjct: 251 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 289
Query: 331 GATSR--DSMRAVW 342
            A +   D M+  W
Sbjct: 290 HAPAEMYDIMKTCW 303

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92  PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
           PR R+     +G G FG+VVE        ++    VA+K+++       REA M E+ VL
Sbjct: 37  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 96
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
             L  H           IGG     T Y  +  DL+  L R                   
Sbjct: 97  SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
                        Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+ 
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 213
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
                                    D +YVV         + APE I    + +  D+WS
Sbjct: 214 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
            G  L EL S                    LG  P+   +  D +  K  + G R+  P+
Sbjct: 249 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 287
Query: 331 GATSR--DSMRAVW 342
            A +   D M+  W
Sbjct: 288 HAPAEMYDIMKTCW 301

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 104/314 (33%), Gaps = 112/314 (35%)
Query: 92  PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
           PR R+     +G G FG+VVE        ++    VA+K+++       REA M E+ VL
Sbjct: 44  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
             L  H           IGG     T Y  +  DL+  L R                   
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
                        Q+ + +AF+     IH DL   NILL      K+             
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI------------- 209
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
                          DFG       D +YVV         + APE I    + +  D+WS
Sbjct: 210 --------------CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
            G  L EL S                    LG  P+   +  D +  K  + G R+  P+
Sbjct: 256 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 294
Query: 331 GATSR--DSMRAVW 342
            A +   D M+  W
Sbjct: 295 HAPAEMYDIMKTCW 308

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           F +  + ++ RQ    + ++H   +IH DLK  NI L     VK+ D+   +  S+    
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-- 174
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCI 274
                          GS  FE    S +     + APEVI     N   +  D+++ G +
Sbjct: 175 ---------------GSHQFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIV 214
Query: 275 LVELCSGEALFQTHENLEHLAMM 297
           L EL +G+  +    N + +  M
Sbjct: 215 LYELMTGQLPYSNINNRDQIIEM 237

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 108/314 (34%), Gaps = 112/314 (35%)
Query: 92  PRYRIL--SKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVL 142
           PR R+     +G G FG+VVE        ++    VA+K+++       REA M E+ VL
Sbjct: 44  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 143 QRLARH----------DIGG-----TRYRSFPIDLVRELGR------------------- 168
             L  H           IGG     T Y  +  DL+  L R                   
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
                        Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+ 
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN- 220
Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWS 270
                                    D +YVV         + APE I    + +  D+WS
Sbjct: 221 -------------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
            G  L EL S                    LG  P+   +  D +  K  + G R+  P+
Sbjct: 256 YGIFLWELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPE 294
Query: 331 GATSR--DSMRAVW 342
            A +   D M+  W
Sbjct: 295 HAPAEMYDIMKTCW 308

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 124/344 (36%), Gaps = 103/344 (29%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L  +AR
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IAR 59
Query: 148 HDIGGTRYRSFP--------------IDLVRELG---------------RQLLESVAFMH 178
           H      + SF               +D+   +                 Q+ E++ F+H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-TF 237
              + H D++PENI+             + +R            +SS IK+I+FG     
Sbjct: 120 SHNIGHFDIRPENII-------------YQTR------------RSSTIKIIEFGQARQL 154
Query: 238 EHQDHSYVVSTR-HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           +  D+  ++ T   Y APEV      +   D+WS+G ++  L SG   F    N +   +
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---I 211
Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           +E ++                      A   + + A    S+ A                
Sbjct: 212 IENIM---------------------NAEYTFDEEAFKEISIEA---------------- 234
Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 400
                 +D +  LL  +   R+ A EAL+HP+  + + R +  V
Sbjct: 235 ------MDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS--------- 186
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 187 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 234 QLPYSNINNRDQIIFM 249

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
           +GE+    +R+L   G G FG+V  C      +L A K +      +    + AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
           L ++              + D+         G  RY  + +D                Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           +  +  +H+  +I+ DLKPEN+LL     V++ D   L+   K G               
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
                  + +   Y   T  + APE++LG  +++  D +++G  L E+ +    F+   E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
            +E+  + +RVL
Sbjct: 395 KVENKELKQRVL 406

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 102/267 (38%), Gaps = 67/267 (25%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
           +GEG FG+V + C+D   +   E+VA+K ++     + R     EI++L+ L    I   
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI--V 73
Query: 154 RYRSF-------PIDLVRE-----------------------LGRQLLESVAFMHELRLI 183
           +Y+          + LV E                         +Q+ E +A++H    I
Sbjct: 74  KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYI 133
Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H  L   N+LL +   VK+ D+  L+++  +G  +  + +       D  S  F      
Sbjct: 134 HRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDSPVF------ 179
Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
                  + APE +    + Y  D+WS G  L EL     L     N         ++G 
Sbjct: 180 -------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPHTKFTELIGH 227
Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPD 330
               M +    R  +   RG RL  PD
Sbjct: 228 TQGQMTV---LRLTELLERGERLPRPD 251

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           F +  + ++ RQ    + ++H   +IH DLK  NI L     VK+ D+   +  S+    
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-- 174
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCI 274
                          GS  FE    S +     + APEVI     N   +  D+++ G +
Sbjct: 175 ---------------GSHQFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIV 214
Query: 275 LVELCSGEALFQTHENLEHLAMM 297
           L EL +G+  +    N + +  M
Sbjct: 215 LYELMTGQLPYSNINNRDQIIEM 237

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 12  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH +
Sbjct: 71  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D  Y         IK                  
Sbjct: 131 LRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------------ 171
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 172 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 221
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 222 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 259

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 128 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS--------- 178
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 179 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 226 QLPYSNINNRDQIIFM 241

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
           +GE+    +R+L   G G FG+V  C      +L A K +      +    + AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
           L ++              + D+         G  RY  + +D                Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           +  +  +H+  +I+ DLKPEN+LL     V++ D   L+   K G               
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
                  + +   Y   T  + APE++LG  +++  D +++G  L E+ +    F+   E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
            +E+  + +RVL
Sbjct: 395 KVENKELKQRVL 406

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
           +GE+    +R+L   G G FG+V  C      +L A K +      +    + AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
           L ++              + D+         G  RY  + +D                Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           +  +  +H+  +I+ DLKPEN+LL     V++ D   L+   K G               
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
                  + +   Y   T  + APE++LG  +++  D +++G  L E+ +    F+   E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
            +E+  + +RVL
Sbjct: 395 KVENKELKQRVL 406

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDV 141
           +GE+    +R+L   G G FG+V  C      +L A K +      +    + AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 142 LQRL-------------ARHDI---------GGTRYRSFPIDLVRE---------LGRQL 170
           L ++              + D+         G  RY  + +D                Q+
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 171 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
           +  +  +H+  +I+ DLKPEN+LL     V++ D   L+   K G               
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG--------------- 342
Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-E 289
                  + +   Y   T  + APE++LG  +++  D +++G  L E+ +    F+   E
Sbjct: 343 -------QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Query: 290 NLEHLAMMERVL 301
            +E+  + +RVL
Sbjct: 395 KVENKELKQRVL 406

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 156 RSFPIDLVRELGRQLLESVAFMHE---LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 212
           +  P D++     Q+   + ++H+   + +IH DLK  NIL++              +  
Sbjct: 100 KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL--------------QKV 145
Query: 213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRH-YRAPEVILGLGWNYPCDLWSV 271
           ++G     +     +K+ DFG     H+      +  + + APEVI    ++   D+WS 
Sbjct: 146 ENGDLSNKI-----LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSY 200
Query: 272 GCILVELCSGEALFQTHENL--EHLAMMERVLGPLP 305
           G +L EL +GE  F+  + L   +   M ++  P+P
Sbjct: 201 GVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 124 IVRSINKYR-EAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
           IVR I   + EA M+ +++      H     +    P+  V EL  Q+   + ++ E   
Sbjct: 72  IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DL   N+LLV+  Y K+ D+        D SY+      SA K              
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY---TARSAGKW------------- 175
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                   + APE I    ++   D+WS G  + E  S G+  ++  +  E +A +E+
Sbjct: 176 -----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 17/232 (7%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG----- 151
           L +MG GT GQV +    +   ++A+K +R      E   I +D+   L  HD       
Sbjct: 30  LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 152 -GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 210
            GT   +  + +  EL     E +    +  +    L    + +V A Y     +  + R
Sbjct: 90  FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 211 SSKDGSYFKNLPKSSAIKLIDFGSTT--FEHQDHSYVVSTRHYRAPEVI-----LGLGWN 263
             K  +    L +   IKL DFG +    + +          Y APE I         ++
Sbjct: 150 DVKPSNIL--LDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 264 YPCDLWSVGCILVELCSGEALFQT-HENLEHLAMMERVLGP-LPHHMVIRAD 313
              D+WS+G  LVEL +G+  ++    + E L  + +   P LP HM    D
Sbjct: 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 244
Query: 150 -----------IGGTRYRSFPIDLVR-------------ELGRQLLESVAFMHELRLIHT 185
                      +G    +   +D ++             ++  Q+   +A++  +  +H 
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 305 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 346
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 27/125 (21%)
Query: 158 FPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
            P  ++ ++   +++ + ++ E  +++H D+KP NIL+ S   +K+ D+           
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF----------- 152
Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                    + +LID  +  F        V TR Y +PE + G  ++   D+WS+G  LV
Sbjct: 153 -------GVSGQLIDEMANEF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 197
Query: 277 ELCSG 281
           E+  G
Sbjct: 198 EMAVG 202

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 77/259 (29%)
Query: 66  PRTGSPPWRPDDKDGHYVFAIG--------ENLTPRYRILSKMGEGTFGQVVECFDNEKK 117
           P+T S P  P D D     +IG        ++L P    + ++G G +G V +       
Sbjct: 23  PQTSSTP--PRDLDSKACISIGNQNFEVKADDLEP----IMELGRGAYGVVEKMRHVPSG 76
Query: 118 ELVAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTRY-------------------- 155
           +++A+K +R+    +E    ++++D+  R        T Y                    
Sbjct: 77  QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSL 136
Query: 156 -----------RSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVP 203
                      ++ P D++ ++   +++++  +H +L +IH D+KP N+L+ +   VK+ 
Sbjct: 137 DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMC 196
Query: 204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI----LG 259
           D+           Y  +    S  K ID G               + Y APE I      
Sbjct: 197 DFGI-------SGYLVD----SVAKTIDAG--------------CKPYMAPERINPELNQ 231
Query: 260 LGWNYPCDLWSVGCILVEL 278
            G++   D+WS+G  ++EL
Sbjct: 232 KGYSVKSDIWSLGITMIEL 250

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 327
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 388 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 429
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 430 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 90/239 (37%), Gaps = 64/239 (26%)
Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           PI L+R    Q+   VA +H L++IH DLKP+NIL+ ++        +F +         
Sbjct: 117 PISLLR----QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENL 165
Query: 219 KNLPKSSAI-KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWS 270
           + L     + K +D G   F    ++    T  +RAPE++                D++S
Sbjct: 166 RILISDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
           +GC+   + S                     G  P           +KY R    +    
Sbjct: 225 MGCVFYYILSK--------------------GKHPF---------GDKYSRESNII---R 252
Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           G  S D M+ +            H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 253 GIFSLDEMKCL------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-- 528
Query: 223 KSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS- 280
                            Q H  + V    + APE I    ++   D+WS G ++ E  S 
Sbjct: 529 -----------------QTHGKWPVK---WYAPECINYYKFSSKSDVWSFGVLMWEAFSY 568
Query: 281 GEALFQTHENLEHLAMMER 299
           G+  ++  +  E  AM+E+
Sbjct: 569 GQKPYRGMKGSEVTAMLEK 587

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS--------- 158
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 159 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 206 QLPYSNINNRDQIIFM 221

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 135 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 185
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 186 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 233 QLPYSNINNRDQIIFM 248

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 80/232 (34%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIE------------ID 140
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R    +             +D
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD 78
Query: 141 VLQRL--ARHDI--------GGTRY--------RSFPIDLVRELGRQLLESVAFMHELRL 182
           V + L   R  +        GG  +        ++F      E+ + + E++ ++H + +
Sbjct: 79  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
            H D+KPEN+L  S    K P+                    + +KL DFG    TT E 
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTGEK 174
Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
            D S                      CD+WS+G I+  L  G   F ++  L
Sbjct: 175 YDKS----------------------CDMWSLGVIMYILLCGYPPFYSNHGL 204

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA-- 529
Query: 223 KSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS- 280
                            Q H  + V    + APE I    ++   D+WS G ++ E  S 
Sbjct: 530 -----------------QTHGKWPVK---WYAPECINYYKFSSKSDVWSFGVLMWEAFSY 569
Query: 281 GEALFQTHENLEHLAMMER 299
           G+  ++  +  E  AM+E+
Sbjct: 570 GQKPYRGMKGSEVTAMLEK 588

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 186
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 187 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 234 QLPYSNINNRDQIIFM 249

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 79  YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 25  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 84  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D            IK                  
Sbjct: 144 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 184
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 185 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 234
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 235 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 272

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 81  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D            IK                  
Sbjct: 141 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 181
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 182 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 231
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 232 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 244
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 305 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 346
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           F +  + ++ RQ    + ++H   +IH DLK  NI L     VK+ D+   +  S+    
Sbjct: 105 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS-- 162
Query: 218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCI 274
                          GS  FE    S +     + APEVI     N   +  D+++ G +
Sbjct: 163 ---------------GSHQFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIV 202
Query: 275 LVELCSGEALFQTHENLEHLAMM 297
           L EL +G+  +    N + +  M
Sbjct: 203 LYELMTGQLPYSNINNRDQIIEM 225

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 75  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D            IK                  
Sbjct: 135 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 175
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 176 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 225
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 226 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + F+HE   IH D+K  NILL  A   K+ D+     S K                  F 
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FA 187
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            T       S +V T  Y APE + G       D++S G +L+E+ +G
Sbjct: 188 QTVMX----SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 24  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 83  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D            IK                  
Sbjct: 143 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 183
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 184 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 233
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 234 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 271

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 244
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 305 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 346
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 79  YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 10  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 67
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 68  YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 128 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 169
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 170 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 12  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 69
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 70  YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 130 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 171
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 172 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 14  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 71
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 72  YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 132 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 173
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 174 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 124 IVRSINKYR-EAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
           IVR I   + EA M+ +++      H     +    P+  V EL  Q+   + ++ E   
Sbjct: 398 IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H +L   N+LLV+  Y K+ D+        D SY+      SA K              
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT---ARSAGKW------------- 501
Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                   + APE I    ++   D+WS G  + E  S G+  ++  +  E +A +E+
Sbjct: 502 -----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 163
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 164 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 211 QLPYSNINNRDQIIFM 226

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 18  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 75
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 76  YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 136 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 177
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 178 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            Q H        + APE I    ++   D+WS G ++ E  S G
Sbjct: 186 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E  AM+E+
Sbjct: 228 QKPYRGMKGSEVTAMLEK 245

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 185
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            Q H        + APE I    ++   D+WS G ++ E  S G
Sbjct: 186 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E  AM+E+
Sbjct: 228 QKPYRGMKGSEVTAMLEK 245

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 183
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            Q H        + APE I    ++   D+WS G ++ E  S G
Sbjct: 184 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 225
Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E  AM+E+
Sbjct: 226 QKPYRGMKGSEVTAMLEK 243

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 18  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 77  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D            IK                  
Sbjct: 137 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 177
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 178 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 227
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 228 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 265

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 169
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            Q H        + APE I    ++   D+WS G ++ E  S G
Sbjct: 170 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E  AM+E+
Sbjct: 212 QKPYRGMKGSEVTAMLEK 229

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 79  YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 163
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 164 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 211 QLPYSNINNRDQIIFM 226

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 175
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            Q H        + APE I    ++   D+WS G ++ E  S G
Sbjct: 176 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 217
Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E  AM+E+
Sbjct: 218 QKPYRGMKGSEVTAMLEK 235

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 110 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 160
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 161 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 208 QLPYSNINNRDQIIFM 223

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 163
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            Q H        + APE I    ++   D+WS G ++ E  S G
Sbjct: 164 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 205
Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E  AM+E+
Sbjct: 206 QKPYRGMKGSEVTAMLEK 223

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 158
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 159 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 206 QLPYSNINNRDQIIFM 221

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++ RQ  + + ++H   +IH DLK  NI L     VK+ D+   +  S+           
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--------- 158
Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSG 281
                   GS  FE    S +     + APEVI     N   +  D+++ G +L EL +G
Sbjct: 159 --------GSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 282 EALFQTHENLEHLAMM 297
           +  +    N + +  M
Sbjct: 206 QLPYSNINNRDQIIFM 221

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 75  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D            IK                  
Sbjct: 135 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 175
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 176 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 225
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 226 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 63/279 (22%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG-- 152
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 17  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 153 -----------TRYRS---------------FPIDLVRELGRQLLESVAFMHELRLIHTD 186
                      T Y                   I+ + ++  Q+ E +AF+ E   IH D
Sbjct: 76  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV 246
           L+  NIL+      K+ D+  L+R  +D            IK                  
Sbjct: 136 LRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------------ 176
Query: 247 STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLP 305
               + APE I    +    D+WS G +L E+ + G   +    N E +  +ER      
Sbjct: 177 ----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER------ 226
Query: 306 HHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 341
            + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 227 GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 264

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 163 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
           + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K   
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--- 165
Query: 223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 281
                            Q H        + APE I    ++   D+WS G ++ E  S G
Sbjct: 166 ----------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 207
Query: 282 EALFQTHENLEHLAMMER 299
           +  ++  +  E  AM+E+
Sbjct: 208 QKPYRGMKGSEVTAMLEK 225

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V++++ RH+     
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKI-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 79  YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 79  YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 88/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 79  YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL   NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 139 DLAAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 55/235 (23%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 78
Query: 155 YRSF---PIDLVRE--------------------------LGRQLLESVAFMHELRLIHT 185
           Y      PI +V E                          +  Q+   +A++  +  +H 
Sbjct: 79  YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           DL+  NIL+      KV D+  L+R  +D  Y         IK                 
Sbjct: 139 DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK----------------- 180
Query: 246 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -----WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 58/220 (26%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 I---GGTRYRS-----------FP--------------IDLVR--ELGRQLLESVAFMHE 179
           I    G  Y +            P              ID ++  +   Q+ + + ++  
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGSTTFE 238
            R IH DL   NIL+ +   VK+ D+       +D  +FK   P  S I           
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI----------- 181
Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 278
                       + APE +    ++   D+WS G +L EL
Sbjct: 182 -----------FWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 68/226 (30%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQR---------- 144
           L ++G G +G V +       +++A+K +RS    K ++  ++++DV+ R          
Sbjct: 27  LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 145 ---LARH-------DIGGTRYRSFPI-------DLVRE--LGRQLLESVAFMH----ELR 181
              L R        ++  T +  F         D++ E  LG+  L +V  ++     L+
Sbjct: 87  YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFEH 239
           +IH D+KP NIL                           L +S  IKL DFG +    + 
Sbjct: 147 IIHRDIKPSNIL---------------------------LDRSGNIKLCDFGISGQLVDS 179
Query: 240 QDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSG 281
              +     R Y APE I       G++   D+WS+G  L EL +G
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 34/186 (18%)
Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
           I+ + ++  Q+ E +AF+ E   IH DL+  NIL+      K+ D+  L+R  +D     
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG-LARLIEDAEXTA 166
Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
                  IK                      + APE I    +    D+WS G +L E+ 
Sbjct: 167 REGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 280 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSR 335
           + G   +    N E +  +ER       + ++R D   E+ ++   RL W   P+   + 
Sbjct: 205 THGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTF 257
Query: 336 DSMRAV 341
           D +R+V
Sbjct: 258 DYLRSV 263

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 51/226 (22%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++R+  K+G G+FG++    + +  E VAIK+     K+ +  ++    + R+ +   G 
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ--LLYESKIYRILQGGTGI 65
Query: 153 TRYRSFPID-----------------------------LVRELGRQLLESVAFMHELRLI 183
              R F ++                              V  L  Q++  V F+H    +
Sbjct: 66  PNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 125
Query: 184 HTDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
           H D+KP+N L+     A  V + D+  L++  +D S  +++P                ++
Sbjct: 126 HRDIKPDNFLMGLGRRANQVYIIDFG-LAKKYRDTSTHQHIP----------------YR 168
Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
           ++  +  T  Y +    LG+  +   DL S+G +L+    G   +Q
Sbjct: 169 ENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + F+HE   IH D+K  NILL  A   K+ D+     S K                  F 
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FA 187
Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            T    +    +V T  Y APE + G       D++S G +L+E+ +G
Sbjct: 188 QTVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 30/111 (27%)
Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           ++L +++++H + L++ DLKPENI+L   +                            +K
Sbjct: 190 EILPALSYLHSIGLVYNDLKPENIMLTEEQ----------------------------LK 221
Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
           LID G+ +       Y+  T  ++APE++   G     D+++VG  L  L 
Sbjct: 222 LIDLGAVS-RINSFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	405
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-159
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-150
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-148
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-127
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-123
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-115
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-93
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-49
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-48
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-47
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-45
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-44
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-44
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-44
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-44
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-42
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-42
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-42
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-42
3o0g_A	292	Cell division protein kinase 5; kinase activator c	8e-42
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-42
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-41
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-41
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-41
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-40
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-40
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-39
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-39
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-37
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-37
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-37
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-37
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-36
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-36
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-36
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-36
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-35
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-35
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-35
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-35
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-35
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-34
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-34
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-34
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-34
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-34
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-34
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-34
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-34
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-34
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-34
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-34
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	7e-34
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-34
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	9e-34
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-33
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-33
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-33
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-33
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-33
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-33
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-33
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-33
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-33
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-33
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-33
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	7e-33
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-33
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	8e-33
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-32
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-32
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-32
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-32
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-32
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-32
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-32
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-32
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-32
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	6e-32
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-31
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-31
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-31
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-31
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-30
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-30
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-29
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-28
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-28
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	7e-28
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-27
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-27
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	7e-27
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-26
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-26
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-26
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-26
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-26
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-24
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-24
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-23
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-22
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-22
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-21
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-21
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-21
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-21
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-21
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-21
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-21
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-21
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-21
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-21
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-20
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-20
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-20
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-20
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-20
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-19
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-19
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-19
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-19
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-19
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-19
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-18
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-18
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-18
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-18
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-17
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-17
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-17
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-17
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-17
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	7e-17
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	8e-17
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-16
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-16
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-16
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-16
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-16
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-16
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-16
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	7e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-15
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-15
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-15
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-14
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-14
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-12
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-12
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-11
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-11
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	4e-11
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-11
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-11
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-10
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	7e-10
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	7e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	8e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	5e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	9e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-04

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  450 bits (1160), Expect = e-159
 Identities = 120/359 (33%), Positives = 187/359 (52%), Gaps = 43/359 (11%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV 125
               +  ++ DD+  H+ +  G  L   + ++ KMG+GTFG+V+ C   + K+  A+K+V
Sbjct: 9   SGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV 68

Query: 126 RSINKYREAAMIEIDVLQRLARHDIGG--------------------------------- 152
           R+I KY  +A IE D+L+++   DI                                   
Sbjct: 69  RNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITR 128

Query: 153 TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 212
             Y  F I+ ++    ++L+++ ++ ++ L HTDLKPENILL    + K           
Sbjct: 129 NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188

Query: 213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 272
           K    ++   KS+ IKLIDFG  TF+   H  +++TR YRAPEVIL LGW+   D+WS G
Sbjct: 189 KKIQIYR--TKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246

Query: 273 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGA-RLDWPD 330
           C+L EL +G  LF+THE++EHLAMME ++ P+P +M+  A +    KY  +   +L WP+
Sbjct: 247 CVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE 306

Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
            A+S +S++ V K L L  +I   +        D L  +L+ DP  R    E L+H F 
Sbjct: 307 NASSINSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  427 bits (1101), Expect = e-150
 Identities = 139/347 (40%), Positives = 200/347 (57%), Gaps = 49/347 (14%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIE 138
            H +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  E
Sbjct: 2   MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61

Query: 139 IDVLQRLARHD----------------------------------IGGTRYRSFPIDLVR 164
           I VL+ L   D                                  I    +  F +D +R
Sbjct: 62  IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121

Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
           ++  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K            +    +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--------ERTLIN 173

Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
             IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +    K 
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKP 290

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           L+   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF  
Sbjct: 291 LK-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFFDL 334

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  422 bits (1088), Expect = e-148
 Identities = 141/351 (40%), Positives = 208/351 (59%), Gaps = 49/351 (13%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62

Query: 135 AMIEIDVLQRLARHD----------------------------------IGGTRYRSFPI 160
           A +EI+VL+++   D                                  +    ++ +P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +           S  + 
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH--------KSCEEK 174

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G  LFQTHEN EHL MME++LGP+P HM+ R  ++  KYF +G  L W + ++    ++ 
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQ--KYFYKG-GLVWDENSSDGRYVKE 291

Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF  
Sbjct: 292 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  371 bits (955), Expect = e-127
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 70/365 (19%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140

Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
             EI +L+ L + D                                  I   +++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200

Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ------------------------- 235

Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 236 QGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW------PDGATSR 335
             L    +  + LA M  +LG     + + A +RA+ +        +       DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLGMPSQKL-LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVL 354

Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAG----DLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

Query: 392 DVRRP 396
            + +P
Sbjct: 415 RLPKP 419

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  360 bits (927), Expect = e-123
 Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 77/369 (20%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD +  Y+   GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A
Sbjct: 38  DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA 97

Query: 136 MIEIDVLQRLARHD----------------------------------IGGTRYRSFPID 161
            IE+ +L+ + +HD                                  +  T +R   ++
Sbjct: 98  QIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157

Query: 162 LVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
           L R+  +Q+  ++ F+   EL +IH DLKPENILL +                       
Sbjct: 158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN----------------------- 194

Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
             PK SAIK++DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ 
Sbjct: 195 --PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH 252

Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           +GE LF     ++ +  +  VLG  P H+ +    +A K+F +     W    T      
Sbjct: 253 TGEPLFSGANEVDQMNKIVEVLGIPPAHI-LDQAPKARKFFEKLPDGTWNLKKTKDGKRE 311

Query: 340 AVWKLLR-LPNLIMQHVDHSAG--------------DLIDLLQGLLRYDPAERLKAREAL 384
                 R L N++        G                 DL+  +L YDP  R++   AL
Sbjct: 312 YKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYAL 371

Query: 385 RHPFFTRDV 393
           +H FF +  
Sbjct: 372 QHSFFKKTA 380

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  340 bits (874), Expect = e-115
 Identities = 91/367 (24%), Positives = 147/367 (40%), Gaps = 80/367 (21%)

Query: 76  DDKDGHYVFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
               G++    GE     RY ++ K+G G F  V    D      VA+KIVR    Y EA
Sbjct: 2   YRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA 61

Query: 135 AMIEIDVLQRLARHD-------------------------------------------IG 151
           A  EI +LQR+   D                                           I 
Sbjct: 62  AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK 121

Query: 152 GTRYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 210
              +R  P+  V+++ +QLL  + +MH    +IHTD+KPEN+L+   +  +         
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE--------- 172

Query: 211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWS 270
                           IK+ D G+  +  + ++  + TR YR+PEV+LG  W    D+WS
Sbjct: 173 ------------NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 220

Query: 271 VGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 324
             C++ EL +G+ LF+  E      + +H+A +  +LG LP ++ +R  +    +F    
Sbjct: 221 TACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFFNS-- 277

Query: 325 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
                 G     S    W L  +     +     A ++ D L  +L+ DP +R  A   +
Sbjct: 278 -----RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332

Query: 385 RHPFFTR 391
            HP+   
Sbjct: 333 NHPWLKD 339

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  285 bits (730), Expect = 2e-93
 Identities = 95/390 (24%), Positives = 167/390 (42%), Gaps = 83/390 (21%)

Query: 72  PWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY 131
                 K G+++  IG+    RY ++ K+G G F  V   +D + K+ VA+K+V+S   Y
Sbjct: 17  DPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY 76

Query: 132 REAAMIEIDVLQRLARHDI--------------------GGT------------------ 153
            E A+ EI +L+ +   D                      GT                  
Sbjct: 77  TETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII 136

Query: 154 --RYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEY------VKVPD 204
              Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL   E        +  +
Sbjct: 137 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATE 196

Query: 205 YKFLSRSSKDGSYFKNLP----------------KSSAIKLIDFGSTTFEHQDHSYVVST 248
           ++        GS     P                +   +K+ D G+  + H+  +  + T
Sbjct: 197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQT 256

Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLG 302
           R YR+ EV++G G+N P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG
Sbjct: 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316

Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD- 361
            +P  +++      E + ++G                   K   L  ++++  + S  + 
Sbjct: 317 KVPRKLIVAGKYSKEFFTKKGDLKHITKL-----------KPWGLFEVLVEKYEWSQEEA 365

Query: 362 --LIDLLQGLLRYDPAERLKAREALRHPFF 389
               D L  +L   P +R  A E LRHP+ 
Sbjct: 366 AGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  168 bits (428), Expect = 4e-49
 Identities = 82/342 (23%), Positives = 134/342 (39%), Gaps = 96/342 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  L  +GEG++G V++C + +   +VAIK     +   +     AM EI +L++L RH
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL-ESDDDKMVKKIAMREIKLLKQL-RH 83

Query: 149 -------DIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHEL 180
                  ++   + R                          +V++   Q++  + F H  
Sbjct: 84  ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
            +IH D+KPENIL+                 S+ G           +KL DFG + T   
Sbjct: 144 NIIHRDIKPENILV-----------------SQSGV----------VKLCDFGFARTLAA 176

Query: 240 QDHSY--VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLA 295
               Y   V+TR YRAPE+++G    Y    D+W++GC++ E+  GE LF    +++ L 
Sbjct: 177 PGEVYDDEVATRWYRAPELLVG-DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-----NL 350
            +   LG L                             +       +  +RLP       
Sbjct: 236 HIMMCLGNLIPR-------------------HQELFNKNPV-----FAGVRLPEIKEREP 271

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
           + +     +  +IDL +  L  DP +R    E L H FF  D
Sbjct: 272 LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  166 bits (423), Expect = 1e-48
 Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 99/348 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  + K+GEG++G V +C + +  ++VAIK     ++        A+ EI +L++L +H
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQL-KH 61

Query: 149 -------DIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHEL 180
                  ++   + R                       P  LV+ +  Q L++V F H+ 
Sbjct: 62  PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
             IH D+KPENIL+                 +K             IKL DFG +     
Sbjct: 122 NCIHRDVKPENILI-----------------TKHSV----------IKLCDFGFARLLTG 154

Query: 240 QDHSY--VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLA 295
               Y   V+TR YR+PE+++G    Y  P D+W++GC+  EL SG  L+    +++ L 
Sbjct: 155 PSDYYDDEVATRWYRSPELLVG-DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY 213

Query: 296 MMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-----N 349
           ++ + LG  +P H                        +T++      +  +++P      
Sbjct: 214 LIRKTLGDLIPRH--------------------QQVFSTNQY-----FSGVKIPDPEDME 248

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
            +     + +   + LL+G L  DP ERL   + L HP+F  ++R   
Sbjct: 249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF-ENIREIE 295

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  163 bits (416), Expect = 2e-47
 Identities = 77/344 (22%), Positives = 136/344 (39%), Gaps = 83/344 (24%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
                Y+++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L   
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGG 90

Query: 149 -------DIGGTR--------------------YRSFPIDLVRELGRQLLESVAFMHELR 181
                  DI                        Y++     +R    ++L+++ + H + 
Sbjct: 91  PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 150

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H D+KP N+++                            +   ++LID+G   F H  
Sbjct: 151 IMHRDVKPHNVMID--------------------------HEHRKLRLIDWGLAEFYHPG 184

Query: 242 HSYV--VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG-EALFQTHENLEHLAMM 297
             Y   V++R+++ PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  +
Sbjct: 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 244

Query: 298 ERVLGP-----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            +VLG            I  D R      R +R  W                  + +   
Sbjct: 245 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER---------------FVHSENQ 289

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
             V   A   +D L  LLRYD   RL AREA+ HP+F   V + 
Sbjct: 290 HLVSPEA---LDFLDKLLRYDHQSRLTAREAMEHPYF-YTVVKD 329

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  159 bits (405), Expect = 5e-45
 Identities = 92/377 (24%), Positives = 134/377 (35%), Gaps = 109/377 (28%)

Query: 66  PRTGSPPWRPDDKDGHYVFAI--------GENLTPRYRILSKMGEGTFGQVVECFDNEKK 117
           P          DKDG  V  +               Y     +G G+FG V +    +  
Sbjct: 20  PSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG 79

Query: 118 ELVAIKIVRSINKY--REAAMIEI-------------DV--------------------- 141
           ELVAIK V    ++  RE   ++I                                    
Sbjct: 80  ELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136

Query: 142 --LQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
             + R+ARH     +  + P+  V+    QL  S+A++H   + H D+KP+N+LL     
Sbjct: 137 ETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL----- 189

Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-TFEHQDH--SYVVSTRHYRAPEV 256
                               + P ++ +KL DFGS       +   SY+  +R+YRAPE+
Sbjct: 190 --------------------D-PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SRYYRAPEL 227

Query: 257 ILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRA-- 312
           I G   +Y    D+WS GC+L EL  G+ +F     ++ L  + +VLG  P    IR   
Sbjct: 228 IFGAT-DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT-PTREQIREMN 285

Query: 313 DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY 372
               E  F +                    K      +        A   I L   LL Y
Sbjct: 286 PNYTEFKFPQ-------------------IKAHPWTKVFRPRTPPEA---IALCSRLLEY 323

Query: 373 DPAERLKAREALRHPFF 389
            P  RL   EA  H FF
Sbjct: 324 TPTARLTPLEACAHSFF 340

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  155 bits (393), Expect = 2e-44
 Identities = 78/355 (21%), Positives = 127/355 (35%), Gaps = 108/355 (30%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA-------AMIEIDVLQRL 145
           RY  ++++G G +G V +  D      VA+K VR +              + E+ +L+RL
Sbjct: 10  RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVREVALLRRL 68

Query: 146 AR--------------------------------HDIGG----TRYRSFPIDLVRELGRQ 169
                                              D+            P + +++L RQ
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
            L  + F+H   ++H DLKPENIL+                 +  G           +KL
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILV-----------------TSGG----------TVKL 161

Query: 230 IDFG-------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
            DFG                  VV T  YRAPEV+L   +  P D+WSVGCI  E+   +
Sbjct: 162 ADFGLARIYSYQMALTPV----VV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216

Query: 283 ALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
            LF  +   + L  +  ++G P                       DWP   +        
Sbjct: 217 PLFCGNSEADQLGKIFDLIGLPPED--------------------DWPRDVSLPRGAFPP 256

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                + +++   ++ S      LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 257 RGPRPVQSVV-PEMEESG---AQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  157 bits (399), Expect = 2e-44
 Identities = 95/360 (26%), Positives = 144/360 (40%), Gaps = 97/360 (26%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMI------- 137
           GE     Y     +G G+FG V +    E  E VAIK V    ++  RE  ++       
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPN 93

Query: 138 ----------------EIDV----------LQRLARHDIGGTRYRSFPIDLVRELGRQLL 171
                           E+ +          + R +RH       ++ P+ L++    QLL
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH--YAKLKQTMPMLLIKLYMYQLL 151

Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
            S+A++H + + H D+KP+N+LL                         + P S  +KLID
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLL-------------------------D-PPSGVLKLID 185

Query: 232 FGS--TTFEHQDH-SYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQ 286
           FGS       + + SY+  +R+YRAPE+I G   NY    D+WS GC++ EL  G+ LF 
Sbjct: 186 FGSAKILIAGEPNVSYIC-SRYYRAPELIFG-ATNYTTNIDIWSTGCVMAELMQGQPLFP 243

Query: 287 THENLEHLAMMERVLGPLPHHMVIRAD--RRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
               ++ L  + +VLG  P    I+       E  F +                    + 
Sbjct: 244 GESGIDQLVEIIKVLGT-PSREQIKTMNPNYMEHKFPQ-------------------IRP 283

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGE 404
                +        A   IDL+  LL Y P+ RL A EAL HPFF  ++R     +  G 
Sbjct: 284 HPFSKVFRPRTPPDA---IDLISRLLEYTPSARLTAIEALCHPFF-DELRTGEARMPNGR 339

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  155 bits (395), Expect = 2e-44
 Identities = 82/337 (24%), Positives = 135/337 (40%), Gaps = 87/337 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           RYR ++K+GEGT+G+V +  D    E VAIK +R +    E     A+ E+ +L+ L +H
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKEL-QH 92

Query: 149 -------DIGGT--------------------RYRSFPIDLVRELGRQLLESVAFMHELR 181
                   +                       +     + +++    QL+  V F H  R
Sbjct: 93  RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 238
            +H DLKP+N+LL              S +S+             +K+ DFG   +    
Sbjct: 153 CLHRDLKPQNLLLSV------------SDASETP----------VLKIGDFGLARAFGIP 190

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            +  ++ + T  YR PE++LG   +Y    D+WS+ CI  E+     LF     ++ L  
Sbjct: 191 IRQFTHEIITLWYRPPEILLG-SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249

Query: 297 MERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLRLPNLIMQ 353
           +  VLG P                        WP      D       ++   L  ++  
Sbjct: 250 IFEVLGLPDDT--------------------TWPGVTALPDWKQSFPKFRGKTLKRVLGA 289

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
            +D      +DLL  +L  DP +R+ A+ AL HP+F+
Sbjct: 290 LLDDEG---LDLLTAMLEMDPVKRISAKNALEHPYFS 323

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  150 bits (381), Expect = 2e-42
 Identities = 86/352 (24%), Positives = 141/352 (40%), Gaps = 100/352 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +++ L K+G GT+  V +  +      VA+K V+  ++  E     A+ EI +++ L +H
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKEL-KH 62

Query: 149 -------DI--------------------------GGTRYRSFPIDLVRELGRQLLESVA 175
                  D+                           G   R   ++LV+    QLL+ +A
Sbjct: 63  ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 234
           F HE +++H DLKP+N+L+                 +K G           +KL DFG +
Sbjct: 123 FCHENKILHRDLKPQNLLI-----------------NKRGQ----------LKLGDFGLA 155

Query: 235 TTFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHE 289
             F    +++   VV T  YRAP+V++G    Y    D+WS GCIL E+ +G+ LF    
Sbjct: 156 RAFGIPVNTFSSEVV-TLWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213

Query: 290 NLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLR 346
           + E L ++  ++G P                        WP                   
Sbjct: 214 DEEQLKLIFDIMGTPNES--------------------LWPSVTKLPKYNPNIQQRPPRD 253

Query: 347 LPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
           L  ++  H         +D L GLL+ +P  RL A++AL HP+F  +     
Sbjct: 254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF-AEYYHHA 304

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  150 bits (382), Expect = 3e-42
 Identities = 86/355 (24%), Positives = 132/355 (37%), Gaps = 98/355 (27%)

Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEI- 139
                     R+++    G+GTFG V    +      VAIK V    ++  RE  +++  
Sbjct: 14  ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDL 73

Query: 140 ------------------------DV------------LQRLARHDIGGTRYRSFPIDLV 163
                                   D+            L R  R+     R  + P  L+
Sbjct: 74  AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYY--RRQVAPPPILI 131

Query: 164 RELGRQLLESVAFMHE--LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
           +    QL+ S+  +H   + + H D+KP N+L+                         N 
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-------------------------N- 165

Query: 222 PKSSAIKLIDFGS--TTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPC--DLWSVGCILV 276
                +KL DFGS       + + +Y+  +R+YRAPE+I G   +Y    D+WSVGCI  
Sbjct: 166 EADGTLKLCDFGSAKKLSPSEPNVAYIC-SRYYRAPELIFGNQ-HYTTAVDIWSVGCIFA 223

Query: 277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR--RAEKYFRRGARLDWPDGATS 334
           E+  GE +F+   +   L  + RVLG  P   V+R       +        + W      
Sbjct: 224 EMMLGEPIFRGDNSAGQLHEIVRVLGC-PSREVLRKLNPSHTDVDLYNSKGIPWS----- 277

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                    +         H    A +  DLL  LL+Y P ER+K  EAL HP+F
Sbjct: 278 --------NVFS------DHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  149 bits (378), Expect = 4e-42
 Identities = 89/341 (26%), Positives = 140/341 (41%), Gaps = 100/341 (29%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +Y+ L K+GEGT+G V +  D+ +  +VA+K +R ++   E     A+ EI +L+ L  H
Sbjct: 22  KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIR-LDAEDEGIPSTAIREISLLKEL-HH 78

Query: 149 -------DIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHEL 180
                  D+  +                              ++    QLL  VA  H+ 
Sbjct: 79  PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
           R++H DLKP+N+L+                 + DG+          +KL DFG +  F  
Sbjct: 139 RILHRDLKPQNLLI-----------------NSDGA----------LKLADFGLARAFGI 171

Query: 240 QDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHL 294
              SY   VV T  YRAP+V++G    Y    D+WS+GCI  E+ +G+ LF    + + L
Sbjct: 172 PVRSYTHEVV-TLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229

Query: 295 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP----N 349
             +  +LG P P                     +WP            WK          
Sbjct: 230 PKIFSILGTPNPR--------------------EWPQVQELPL-----WKQRTFQVFEKK 264

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                +     + IDLL  +L +DP +R+ AR+A+ HP+F 
Sbjct: 265 PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  148 bits (376), Expect = 4e-42
 Identities = 86/339 (25%), Positives = 137/339 (40%), Gaps = 97/339 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +Y  L K+GEGT+G V +  +N   E  A+K +R + K  E      + EI +L+ L +H
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH 59

Query: 149 -------DIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHEL 180
                  D+  T+ R                            +    QLL  +A+ H+ 
Sbjct: 60  SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
           R++H DLKP+N+L+                 +++G           +K+ DFG +  F  
Sbjct: 120 RVLHRDLKPQNLLI-----------------NREG----------ELKIADFGLARAFGI 152

Query: 240 QDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHL 294
               Y   +V T  YRAP+V++G    Y    D+WSVGCI  E+ +G  LF      + L
Sbjct: 153 PVRKYTHEIV-TLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210

Query: 295 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLRLPNLI 351
             + R+LG P                       +WP+            V++    P   
Sbjct: 211 MRIFRILGTPNSK--------------------NWPNVTELPKYDPNFTVYE----PLPW 246

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
              +       IDLL  +L+ DP +R+ A++AL H +F 
Sbjct: 247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  148 bits (375), Expect = 8e-42
 Identities = 88/340 (25%), Positives = 141/340 (41%), Gaps = 97/340 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +Y  L K+GEGT+G V +  + E  E+VA+K VR ++   E    +A+ EI +L+ L +H
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKEL-KH 60

Query: 149 -------DIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHEL 180
                  D+  +  +                         ++V+    QLL+ + F H  
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
            ++H DLKP+N+L+                 +++G           +KL +FG +  F  
Sbjct: 121 NVLHRDLKPQNLLI-----------------NRNGE----------LKLANFGLARAFGI 153

Query: 240 QDHSY--VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCS-GEALFQTHENLEHL 294
               Y   V T  YR P+V+ G    Y    D+WS GCI  EL + G  LF  ++  + L
Sbjct: 154 PVRCYSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212

Query: 295 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL---PNL 350
             + R+LG P                        WP      D     +K   +      
Sbjct: 213 KRIFRLLGTPTEE--------------------QWPSMTKLPD-----YKPYPMYPATTS 247

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           ++  V        DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 248 LVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  148 bits (377), Expect = 8e-42
 Identities = 84/353 (23%), Positives = 131/353 (37%), Gaps = 105/353 (29%)

Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLAR 147
           +Y  ++++GEG +G+V +  D       VA+K VR +    E    + + E+ VL+ L  
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70

Query: 148 --------------------------------HDIGG----TRYRSFPIDLVRELGRQLL 171
                                            D+            P + ++++  QLL
Sbjct: 71  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130

Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
             + F+H  R++H DLKP+NIL+                 +  G           IKL D
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV-----------------TSSG----------QIKLAD 163

Query: 232 FG-------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           FG                  VV T  YRAPEV+L   +  P DLWSVGCI  E+   + L
Sbjct: 164 FGLARIYSFQMALTSV----VV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F+   +++ L  +  V+G  P                      WP               
Sbjct: 219 FRGSSDVDQLGKILDVIGL-PGEED------------------WPRDVALPRQAFHSKSA 259

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             +   +   +D       DLL   L ++PA+R+ A  AL HP+F +D+ R  
Sbjct: 260 QPIEKFV-TDIDELG---KDLLLKCLTFNPAKRISAYSALSHPYF-QDLERCK 307

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  148 bits (376), Expect = 1e-41
 Identities = 85/348 (24%), Positives = 135/348 (38%), Gaps = 101/348 (29%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
            Y  L K+GEGT+  V +        LVA+K +R  ++  E     A+ E+ +L+ L +H
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KH 59

Query: 149 -------DIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMHEL 180
                  DI  T                           +  V+    QLL  +A+ H  
Sbjct: 60  ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
           +++H DLKP+N+L+                 ++ G           +KL DFG +     
Sbjct: 120 KVLHRDLKPQNLLI-----------------NERG----------ELKLADFGLARAKSI 152

Query: 240 QDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHL 294
              +Y   VV T  YR P+++LG   +Y    D+W VGCI  E+ +G  LF      E L
Sbjct: 153 PTKTYDNEVV-TLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210

Query: 295 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP----N 349
             + R+LG P                        WP   ++ +     +K    P     
Sbjct: 211 HFIFRILGTPTEE--------------------TWPGILSNEE-----FKTYNYPKYRAE 245

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
            ++ H      D  DLL  LL+++   R+ A +A++HPFF   +    
Sbjct: 246 ALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF-LSLGERI 292

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  148 bits (375), Expect = 1e-41
 Identities = 73/347 (21%), Positives = 123/347 (35%), Gaps = 123/347 (35%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            Y IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +H 
Sbjct: 29  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                           + +S      +   + +LE+V  +H+  
Sbjct: 88  DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
           ++H+DLKP N L+V                  DG           +KLIDFG +   +  
Sbjct: 148 IVHSDLKPANFLIV------------------DGM----------LKLIDFGIANQMQPD 179

Query: 241 DHSYVVSTR----HYRAPEVILGLGW-----------NYPCDLWSVGCILVELCSGEALF 285
             S V  ++    +Y  PE I  +             +   D+WS+GCIL  +  G+  F
Sbjct: 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239

Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
           Q   N   ++ +  ++ P                      +++PD               
Sbjct: 240 QQIIN--QISKLHAIIDP-------------------NHEIEFPDIPEK----------- 267

Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                          DL D+L+  L+ DP +R+   E L HP+    
Sbjct: 268 ---------------DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  147 bits (373), Expect = 4e-41
 Identities = 73/352 (20%), Positives = 123/352 (34%), Gaps = 123/352 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            Y IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +H 
Sbjct: 10  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                           + +S      +   + +LE+V  +H+  
Sbjct: 69  DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
           ++H+DLKP N L+V                  DG           +KLIDFG +   +  
Sbjct: 129 IVHSDLKPANFLIV------------------DGM----------LKLIDFGIANQMQPD 160

Query: 241 DHSYVVSTR----HYRAPEVILGLG-----------WNYPCDLWSVGCILVELCSGEALF 285
             S V  ++    +Y  PE I  +             +   D+WS+GCIL  +  G+  F
Sbjct: 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220

Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
           Q   N   ++ +  ++ P                      +++PD               
Sbjct: 221 QQIIN--QISKLHAIIDP-------------------NHEIEFPDIPEK----------- 248

Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                          DL D+L+  L+ DP +R+   E L HP+         
Sbjct: 249 ---------------DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  146 bits (370), Expect = 1e-40
 Identities = 83/340 (24%), Positives = 133/340 (39%), Gaps = 96/340 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA------AMIEIDVLQRLA 146
           RY  L  +GEG F  V +  D    ++VAIK ++  ++          A+ EI +LQ L 
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL- 69

Query: 147 RH-------DIGGTRYR---------------------SFPIDLVRELGRQLLESVAFMH 178
            H       D  G +                             ++      L+ + ++H
Sbjct: 70  SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 237
           +  ++H DLKP N+LL                  ++G           +KL DFG + +F
Sbjct: 130 QHWILHRDLKPNNLLL-----------------DENG----------VLKLADFGLAKSF 162

Query: 238 EHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLE 292
              + +Y   VV TR YRAPE++ G    Y    D+W+VGCIL EL           +L+
Sbjct: 163 GSPNRAYTHQVV-TRWYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL--PNL 350
            L  +   LG  P           E+         WPD  +  D     +   +      
Sbjct: 221 QLTRIFETLGT-PT----------EEQ--------WPDMCSLPD-----YVTFKSFPGIP 256

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
           +      +  DL+DL+QGL  ++P  R+ A +AL+  +F+
Sbjct: 257 LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  143 bits (364), Expect = 8e-40
 Identities = 67/341 (19%), Positives = 114/341 (33%), Gaps = 100/341 (29%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
              T  Y +   +G G++     C         A+KI   I+K +     EI++L R  +
Sbjct: 18  IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQ 74

Query: 148 H-------DI---------------GG------TRYRSFPIDLVRELGRQLLESVAFMHE 179
           H       D+               GG       R + F       +   + ++V ++H 
Sbjct: 75  HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 238
             ++H DLKP NIL V                              +I++ DFG +    
Sbjct: 135 QGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGFAKQLR 171

Query: 239 HQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
            ++        T ++ APEV+   G++  CD+WS+G +L  + +G   F    +     +
Sbjct: 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI 231

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           + R+                        +     G          W            V 
Sbjct: 232 LARIG---------------------SGKFSLSGGY---------WN----------SVS 251

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
            +A DL+     +L  DP +RL A   LRHP+     + P 
Sbjct: 252 DTAKDLVS---KMLHVDPHQRLTAALVLRHPWIVHWDQLPQ 289

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  143 bits (363), Expect = 2e-39
 Identities = 84/356 (23%), Positives = 139/356 (39%), Gaps = 111/356 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRL--- 145
           +Y  L+K+G+GTFG+V +    +  + VA+K V  +   +E     A+ EI +LQ L   
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHE 76

Query: 146 -----------------------------ARHDIGG---TRYRSFPIDLVRELGRQLLES 173
                                          HD+ G        F +  ++ + + LL  
Sbjct: 77  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 136

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + ++H  +++H D+K  N+L+                 ++DG           +KL DFG
Sbjct: 137 LYYIHRNKILHRDMKAANVLI-----------------TRDGV----------LKLADFG 169

Query: 234 -----STTFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEA 283
                S     Q + Y   VV T  YR PE++LG   +Y  P DLW  GCI+ E+ +   
Sbjct: 170 LARAFSLAKNSQPNRYTNRVV-TLWYRPPELLLG-ERDYGPPIDLWGAGCIMAEMWTRSP 227

Query: 284 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 342
           + Q +     LA++ ++ G   P                      WP+           +
Sbjct: 228 IMQGNTEQHQLALISQLCGSITPE--------------------VWPNVDNYEL-----Y 262

Query: 343 KLLRLP----NLIMQHVDHSAGDL--IDLLQGLLRYDPAERLKAREALRHPFFTRD 392
           + L L       +   +     D   +DL+  LL  DPA+R+ + +AL H FF  D
Sbjct: 263 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  144 bits (364), Expect = 2e-39
 Identities = 73/349 (20%), Positives = 123/349 (35%), Gaps = 123/349 (35%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            Y IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +H 
Sbjct: 57  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 150 I----------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                           + +S      +   + +LE+V  +H+  
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
           ++H+DLKP N L+V                  DG           +KLIDFG +   +  
Sbjct: 176 IVHSDLKPANFLIV------------------DGM----------LKLIDFGIANQMQPD 207

Query: 241 DHSYVVSTR----HYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGEALF 285
             S V  ++    +Y  PE I  +  +              D+WS+GCIL  +  G+  F
Sbjct: 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267

Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
           Q   N   ++ +  ++ P                      +++PD               
Sbjct: 268 QQIIN--QISKLHAIIDP-------------------NHEIEFPDIPEK----------- 295

Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
                          DL D+L+  L+ DP +R+   E L HP+      
Sbjct: 296 ---------------DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  137 bits (346), Expect = 1e-37
 Identities = 64/340 (18%), Positives = 117/340 (34%), Gaps = 104/340 (30%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-I-- 150
           +  ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L  H  +  
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVR 66

Query: 151 --------------------------------GGT-------RYRSFPIDLVRELGRQLL 171
                                            GT          +   D    L RQ+L
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126

Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLI 230
           E+++++H   +IH DLKP NI +  +  VK+ D  F L+++         L   +     
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD--FGLAKNVHRSLDILKLDSQNLPGSS 184

Query: 231 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHE 289
           D  ++          + T  Y A EV+ G G  N   D++S+G I  E+      F T  
Sbjct: 185 DNLTS---------AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP---FSTGM 232

Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 349
              ++  ++++                     R   +++P                    
Sbjct: 233 ERVNI--LKKL---------------------RSVSIEFPP------------------- 250

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                 D+       +++ L+ +DP +R  AR  L   + 
Sbjct: 251 ---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  138 bits (349), Expect = 3e-37
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 46/337 (13%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRL 145
           ++  +Y ++ K+G+G +G V +  D    E+VA+K I  +     +A     EI +L  L
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL 65

Query: 146 ARH-------DIGGTRYRSFP-IDLVRE-----LGR-----------------QLLESVA 175
           + H       ++   R  +   + LV +     L                   QL++ + 
Sbjct: 66  SGHENIVNLLNV--LRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIK 123

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGS 234
           ++H   L+H D+KP NILL +  +VKV D  F LSRS  +     N    S  +  +   
Sbjct: 124 YLHSGGLLHRDMKPSNILLNAECHVKVAD--FGLSRSFVNIRRVTNNIPLSINENTENFD 181

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                    YV  TR YRAPE++LG   +    D+WS+GCIL E+  G+ +F     +  
Sbjct: 182 DDQPILTD-YVA-TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239

Query: 294 LAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
           L  +  V+  P    +       A+               +++  +   WK L L     
Sbjct: 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKV-EIRQSNKRDIFTKWKNLLLKINPK 298

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
              +  A   +DLL  LL+++P +R+ A +AL+HPF 
Sbjct: 299 ADCNEEA---LDLLDKLLQFNPNKRISANDALKHPFV 332

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  139 bits (352), Expect = 5e-37
 Identities = 75/351 (21%), Positives = 130/351 (37%), Gaps = 103/351 (29%)

Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREA 134
             G ++ +   +L+  Y+ + K+G G +G+V+ C D       AIKI+            
Sbjct: 23  TPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK 82

Query: 135 AMIEIDVLQRLARHDI---------------------GG------TRYRSFPIDLVRELG 167
            + E+ VL+ L   +I                     GG           F       + 
Sbjct: 83  LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVII 142

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+L  V ++H+  ++H DLKPEN+LL S E                        K + I
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKE------------------------KDALI 178

Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           K++DFG +            + T +Y APEV+    ++  CD+WS+G IL  L +G   F
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237

Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
               + E   ++ +V              + +  F      +W                 
Sbjct: 238 GGQTDQE---ILRKVE-------------KGKYTFD---SPEWK---------------- 262

Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                   +V   A    DL++ +L++D   R+ A++AL HP+      + 
Sbjct: 263 --------NVSEGA---KDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKK 302

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  136 bits (345), Expect = 6e-37
 Identities = 86/341 (25%), Positives = 141/341 (41%), Gaps = 79/341 (23%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K   A     EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66

Query: 147 RHD--------IGGTRYRSFP-IDLVRE-----LGR-----------------QLLESVA 175
           +H+             + +F  + +++E     L R                 Q L +V 
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            +H   +IH DLKP N+L+ S   +KV D  F L+R   + +   + P      +++   
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCD--FGLARIIDESAADNSEPTGQQSGMVE--- 181

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                    +V  TR YRAPEV+L    ++   D+WS GCIL EL     +F   +    
Sbjct: 182 ---------FVA-TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231

Query: 294 LAMMERVLG-PLPHHMVIR-ADRRAEKYFR---RGARLDWPDGATSRDSMRAVWKLLRLP 348
           L ++  ++G P   + +      RA +Y +                             P
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK---------------MFP 276

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                 V+      IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 277 R-----VNPKG---IDLLQRMLVFDPAKRITAKEALEHPYL 309

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  134 bits (340), Expect = 1e-36
 Identities = 59/332 (17%), Positives = 97/332 (29%), Gaps = 112/332 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
            ++ LS++G G++G+V +    E   L A+K   S     K R   + E+   +++ +H 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 150 ----------------I-----GGT-------RYRSFPIDLVRELGRQLLESVAFMHELR 181
                           +     G +          S P   V    R  L ++A +H   
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
           L+H D+KP NI L                    G            KL DFG        
Sbjct: 178 LVHLDVKPANIFL-----------------GPRGR----------CKLGDFGLLVELGTA 210

Query: 241 DHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                      Y APE++ G  +    D++S+G  ++E+     L    E  + L     
Sbjct: 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-RQGY 268

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +       +                         S +                       
Sbjct: 269 LPPEFTAGL-------------------------SSE----------------------- 280

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
             L  +L  +L  DP  R  A   L  P   +
Sbjct: 281 --LRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  138 bits (349), Expect = 1e-36
 Identities = 79/347 (22%), Positives = 132/347 (38%), Gaps = 103/347 (29%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAM 136
           G            RY I+  +G+G+FG+V++C D   ++  A+K++    + NK     +
Sbjct: 10  GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69

Query: 137 IEIDVLQRLARHDI---------------------GG------TRYRSFPIDLVRELGRQ 169
            E+++L++L   +I                     GG       + + F       + +Q
Sbjct: 70  REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           +   + +MH+  ++H DLKPENILL S E                        K   IK+
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKI 165

Query: 230 IDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           IDFG +T   Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG   F  
Sbjct: 166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224

Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
               +   +++RV                +  F       W                   
Sbjct: 225 KNEYD---ILKRVE-------------TGKYAFDLP---QWR------------------ 247

Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
                  +   A DLI   + +L + P+ R+ A + L HP+  +   
Sbjct: 248 ------TISDDAKDLI---RKMLTFHPSLRITATQCLEHPWIQKYSS 285

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  134 bits (339), Expect = 2e-36
 Identities = 54/349 (15%), Positives = 98/349 (28%), Gaps = 92/349 (26%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARH-- 148
            + +   +G+G    V      +  +L AIK+    S  +  +  M E +VL++L  H  
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKN 68

Query: 149 -----DI-----------------GG---------TRYRSFPIDLVRELGRQLLESVAFM 177
                 I                  G         +     P      + R ++  +  +
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
            E  ++H ++KP NI+ V  E                          S  KL DFG +  
Sbjct: 129 RENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAARE 165

Query: 237 FEHQDHSY-VVSTRHYRAPEVILGLGWNYP--------CDLWSVGCILVELCSGEALFQT 287
            E  +    +  T  Y  P++                  DLWS+G       +G   F+ 
Sbjct: 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225

Query: 288 HENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
            E       +M +++   P          +         +DW        S+    ++L 
Sbjct: 226 FEGPRRNKEVMYKIITGKPS------GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL- 278

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
                          L  +L  +L  D  +     +             
Sbjct: 279 ---------------LTPVLANILEADQEKCWGFDQFFAETSDILHRGN 312

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  137 bits (346), Expect = 3e-36
 Identities = 79/351 (22%), Positives = 134/351 (38%), Gaps = 104/351 (29%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI 137
           G +V       + RY+    +G+G+FG+V+ C D    +  A+K++  R + +  +   +
Sbjct: 14  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73

Query: 138 --EIDVLQRLARHDI---------------------GG------TRYRSFPIDLVRELGR 168
             E+ +L++L   +I                     GG         + F       + R
Sbjct: 74  LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 133

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  + +MH+ +++H DLKPEN+LL S                          K + I+
Sbjct: 134 QVLSGITYMHKNKIVHRDLKPENLLLESKS------------------------KDANIR 169

Query: 229 LIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
           +IDFG +T           + T +Y APEV+ G  ++  CD+WS G IL  L SG   F 
Sbjct: 170 IIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN 228

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
                +   ++++V              + +  F       W                  
Sbjct: 229 GANEYD---ILKKVE-------------KGKYTFELP---QWK----------------- 252

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                   V  SA DLI   + +L Y P+ R+ AR+AL H +     +   
Sbjct: 253 -------KVSESAKDLI---RKMLTYVPSMRISARDALDHEWIQTYTKEQI 293

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  132 bits (334), Expect = 1e-35
 Identities = 74/333 (22%), Positives = 120/333 (36%), Gaps = 106/333 (31%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARH-------DI-- 150
           GEG+F    +C   +  +  A+KI   I+K  EA    EI  L+    H       ++  
Sbjct: 20  GEGSFSICRKCVHKKSNQAFAVKI---ISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76

Query: 151 -------------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 191
                        GG       + + F       + R+L+ +V+ MH++ ++H DLKPEN
Sbjct: 77  DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136

Query: 192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSY--VVST 248
           +L                              +  IK+IDFG +      +        T
Sbjct: 137 LLFTDEN------------------------DNLEIKIIDFGFARLKPPDNQPLKTPCFT 172

Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF----QTHENLEHLAMMERVLGPL 304
            HY APE++   G++  CDLWS+G IL  + SG+  F    ++      + +M+++    
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK--- 229

Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 364
                                  +   A         WK          +V   A DLI 
Sbjct: 230 ------------------KGDFSFEGEA---------WK----------NVSQEAKDLI- 251

Query: 365 LLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             QGLL  DP +RLK      + +     +  +
Sbjct: 252 --QGLLTVDPNKRLKMSGLRYNEWLQDGSQLSS 282

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  133 bits (336), Expect = 4e-35
 Identities = 65/362 (17%), Positives = 121/362 (33%), Gaps = 113/362 (31%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLA 146
           ++L         +G G+ G VV    + +   VA+K    +   + + A++EI +L    
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKR---MLIDFCDIALMEIKLLTESD 66

Query: 147 RH----------------------------------DIGGTRYRSFPIDLVRELGRQLLE 172
            H                                  ++     +         L RQ+  
Sbjct: 67  DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            VA +H L++IH DLKP+NIL+ +              SS+  +  +   ++  I + DF
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVST--------------SSRFTADQQTGAENLRILISDF 172

Query: 233 G-STTFEHQDHSYVVSTRH------YRAPEVILGLGW-------NYPCDLWSVGCIL-VE 277
           G     +    S+  +  +      +RAPE++                D++S+GC+    
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232

Query: 278 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 337
           L  G+  F                                              +   + 
Sbjct: 233 LSKGKHPF------------------------------------------GDKYSRESNI 250

Query: 338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
           +R ++ L  +  L  + +   A DLI     ++ +DP +R  A + LRHP F    ++  
Sbjct: 251 IRGIFSLDEMKCLHDRSLIAEATDLI---SQMIDHDPLKRPTAMKVLRHPLFWPKSKKLE 307

Query: 398 LL 399
            L
Sbjct: 308 FL 309

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  130 bits (330), Expect = 5e-35
 Identities = 67/343 (19%), Positives = 114/343 (33%), Gaps = 101/343 (29%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-- 145
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 146 ----ARHDI---------------GG-------TRYRSFPIDLVRELGRQLLESVAFMHE 179
                 H+                G        T         +     Q+ E++ F+H 
Sbjct: 61  RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             + H D++PENI+  +                          +SS IK+I+FG      
Sbjct: 121 HNIGHFDIRPENIIYQT-------------------------RRSSTIKIIEFGQARQLK 155

Query: 240 QDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
              ++  + +   Y APEV      +   D+WS+G ++  L SG   F    N +   ++
Sbjct: 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ---II 212

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
           E ++              AE  F   A   + +                        +  
Sbjct: 213 ENIM-------------NAEYTFDEEA---FKE------------------------ISI 232

Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 400
            A D +     LL  +   R+ A EAL+HP+  + + R +  V
Sbjct: 233 EAMDFV---DRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  129 bits (328), Expect = 5e-35
 Identities = 71/334 (21%), Positives = 116/334 (34%), Gaps = 99/334 (29%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
            N+   +  +  +G G F +V         +L A+K ++    +R++++  EI VL+++ 
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK 64

Query: 147 RHDI---------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHE 179
             +I                     GG           +       + +Q+L +V ++HE
Sbjct: 65  HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE 124

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 238
             ++H DLKPEN+L ++ E                        ++S I + DFG S   +
Sbjct: 125 NGIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSKMEQ 160

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
           +   S    T  Y APEV+    ++   D WS+G I   L  G   F   E    L   E
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKL--FE 217

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           ++                   F       W D                        +  S
Sbjct: 218 KIK-------------EGYYEFESP---FWDD------------------------ISES 237

Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
           A D I     LL  DP ER    +AL HP+   +
Sbjct: 238 AKDFIC---HLLEKDPNERYTCEKALSHPWIDGN 268

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  130 bits (330), Expect = 6e-35
 Identities = 68/349 (19%), Positives = 116/349 (33%), Gaps = 114/349 (32%)

Query: 88  ENLTPRYRILSKM-GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
             +T  Y++  ++ G G  G+V+ECF     +  A+K+   +      A  E+D   + +
Sbjct: 24  YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL---LYD-SPKARQEVDHHWQAS 79

Query: 147 RH-----------DIGGTRYRSFPIDLVREL---G-----------------------RQ 169
                        ++   +       ++ E    G                       R 
Sbjct: 80  GGPHIVCILDVYENMHHGKRCLL---IIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           +  ++ F+H   + H D+KPEN+L  S E                        K + +KL
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKL 172

Query: 230 IDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT- 287
            DFG +             T +Y APEV+    ++  CD+WS+G I+  L  G   F + 
Sbjct: 173 TDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232

Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
                   M  R+                     R  +  +P+           W     
Sbjct: 233 TGQAISPGMKRRI---------------------RLGQYGFPNP---------EWS---- 258

Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                  V   A  LI   + LL+ DP ERL   + + HP+  + +  P
Sbjct: 259 ------EVSEDAKQLI---RLLLKTDPTERLTITQFMNHPWINQSMVVP 298

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  128 bits (325), Expect = 1e-34
 Identities = 80/350 (22%), Positives = 132/350 (37%), Gaps = 103/350 (29%)

Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREA 134
             G            RY I+  +G+G+FG+V++C D   ++  A+K++    + NK    
Sbjct: 8   SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67

Query: 135 AMIEIDVLQRLARHDI---------------------GG------TRYRSFPIDLVRELG 167
            + E+++L++L   +I                     GG       + + F       + 
Sbjct: 68  ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII 127

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +Q+   + +MH+  ++H DLKPENILL S E                        K   I
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDI 163

Query: 228 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           K+IDFG +T   Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG   F
Sbjct: 164 KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222

Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
              +N     +++RV                +  F       W                 
Sbjct: 223 -YGKNEY--DILKRVE-------------TGKYAFDLP---QWR---------------- 247

Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
                    +   A DLI     +L + P+ R+ A + L HP+  +    
Sbjct: 248 --------TISDDAKDLIR---KMLTFHPSLRITATQCLEHPWIQKYSSE 286

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  130 bits (330), Expect = 1e-34
 Identities = 70/367 (19%), Positives = 118/367 (32%), Gaps = 109/367 (29%)

Query: 66  PRTGSPPW-RPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKI 124
           P   S    +   +   ++       +  Y +  ++G+G F  V  C         A KI
Sbjct: 2   PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61

Query: 125 VRSINK----YREAAMI--EIDVLQRLARHDI---------------------GG----- 152
              IN      R+   +  E  + ++L   +I                     GG     
Sbjct: 62  ---INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 118

Query: 153 -TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
                 +         +Q+LES+A+ H   ++H +LKPEN+LL S               
Sbjct: 119 IVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA------------- 165

Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLW 269
                      K +A+KL DFG     +   ++     T  Y +PEV+    ++ P D+W
Sbjct: 166 -----------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 214

Query: 270 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 329
           + G IL  L  G   F   E+     +  ++                   +      +W 
Sbjct: 215 ACGVILYILLVGYPPFW-DED--QHRLYAQIK-------------AGAYDYPSP---EWD 255

Query: 330 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                                    V   A  LID    +L  +P +R+ A +AL+ P+ 
Sbjct: 256 ------------------------TVTPEAKSLID---SMLTVNPKKRITADQALKVPWI 288

Query: 390 TRDVRRP 396
               R  
Sbjct: 289 CNRERVA 295

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  132 bits (334), Expect = 1e-34
 Identities = 85/356 (23%), Positives = 136/356 (38%), Gaps = 77/356 (21%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           +    +  Y   +G++   +  RY+ L  +G G  G V   +D      VAIK + R   
Sbjct: 41  KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100

Query: 130 KYREA--AMIEIDVLQRLARHD--IG-------GTRYRSFP-IDLVRELGR--------- 168
               A  A  E+ +++ +  H   I              F  + LV EL           
Sbjct: 101 NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 159

Query: 169 ------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
                       Q+L  +  +H   +IH DLKP NI++ S                    
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-------------------- 199

Query: 217 YFKNLPKSSAIKLIDFG-STTFEHQDHS--YVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
                     +K++DFG + T         YVV TR+YRAPEVILG+G+    D+WSVGC
Sbjct: 200 -------DCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 251

Query: 274 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 333
           I+ E+   + LF   + ++    +   LG      + +       Y     +        
Sbjct: 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK-------Y 304

Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           +  +   ++     P    +H    A    DLL  +L  DPA+R+   +AL+HP+ 
Sbjct: 305 AGLTFPKLFPDSLFPADS-EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  131 bits (330), Expect = 2e-34
 Identities = 82/372 (22%), Positives = 134/372 (36%), Gaps = 109/372 (29%)

Query: 93  RYRILS-KMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL---- 145
            +     K+G GT+G V   +  D +  +  A+K +        +A  EI +L+ L    
Sbjct: 21  LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPN 79

Query: 146 ----------------------ARHD-----------IGGTRYRSFPIDLVRELGRQLLE 172
                                 A HD               +    P  +V+ L  Q+L+
Sbjct: 80  VISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            + ++H   ++H DLKP NIL++                          P+   +K+ D 
Sbjct: 140 GIHYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADM 176

Query: 233 G-STTFEHQDHSY-----VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEAL 284
           G +  F            VV T  YRAPE++LG   +Y    D+W++GCI  EL + E +
Sbjct: 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPI 235

Query: 285 FQ---------THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD----- 330
           F             + + L  +  V+G  P           +K        DW D     
Sbjct: 236 FHCRQEDIKTSNPYHHDQLDRIFNVMGF-PA----------DK--------DWEDIKKMP 276

Query: 331 --GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
                 +D  R  +    L   + +H          LLQ LL  DP +R+ + +A++ P+
Sbjct: 277 EHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 336

Query: 389 FTRDVRRPTLLV 400
           F  +   PT  V
Sbjct: 337 F-LEDPLPTSDV 347

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  129 bits (326), Expect = 2e-34
 Identities = 74/358 (20%), Positives = 114/358 (31%), Gaps = 106/358 (29%)

Query: 89  NLTPRYRILSKM-GEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLA 146
                Y++   + GEG   +V  C +    +  A+KI+ +     R     E+++L +  
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68

Query: 147 RH-------DIGGTRYRSFPIDLVREL---G---------------------RQLLESVA 175
            H       +      R +   LV E    G                     + +  ++ 
Sbjct: 69  GHRNVLELIEFFEEEDRFY---LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD 125

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 234
           F+H   + H DLKPENIL                             + S +K+ DF   
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPN------------------------QVSPVKICDFDLG 161

Query: 235 TTFEHQDHSYVVSTR---------HYRAPEVILGLGW---NY--PCDLWSVGCILVELCS 280
           +  +       +ST           Y APEV+         Y   CDLWS+G IL  L S
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
           G   F                 P   +M+  + +  +  F      DW            
Sbjct: 222 GYPPFV-GRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK---DWA----------- 266

Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
                        H+  +A DLI     LL  D  +RL A + L+HP+        TL
Sbjct: 267 -------------HISCAAKDLI---SKLLVRDAKQRLSAAQVLQHPWVQGCAPENTL 308

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  131 bits (332), Expect = 2e-34
 Identities = 98/413 (23%), Positives = 146/413 (35%), Gaps = 110/413 (26%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAI 122
            + G    +                  +  RY I   +G G++G V E +D  +K +VAI
Sbjct: 24  QQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAI 83

Query: 123 K-IVRSINKYREAAMI--EIDVLQRLARHD--------IGGTRYRSF------------- 158
           K I+R      +   I  EI +L RL  HD        +       F             
Sbjct: 84  KKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD 142

Query: 159 -------PIDLVRELGR----QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 207
                  P+ L     +     LL  V ++H   ++H DLKP N L+     VKV D  F
Sbjct: 143 FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCD--F 200

Query: 208 -LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLG 261
            L+R+        +    S  +      T    ++       +VV TR YRAPE+IL   
Sbjct: 201 GLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV-TRWYRAPELILLQE 259

Query: 262 WNY--PCDLWSVGCILVELCS-----------GEALF--------------------QTH 288
            NY    D+WS+GCI  EL +              LF                     T 
Sbjct: 260 -NYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTR 318

Query: 289 ENLEHLAMMERVLG-PLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKL 344
            N + L ++  +LG P    +       A++Y   F +    D  +              
Sbjct: 319 GNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE-------------- 364

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
            R P          A   I LL+ +L ++P +R+   E L HPFF ++VR   
Sbjct: 365 -RFPA-----SSADA---IHLLKRMLVFNPNKRITINECLAHPFF-KEVRIAE 407

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  132 bits (334), Expect = 2e-34
 Identities = 72/353 (20%), Positives = 126/353 (35%), Gaps = 114/353 (32%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------------SINKYRE 133
             +   Y  + K+G G +G+V+ C +       AIK+++              +I K+ E
Sbjct: 32  GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91

Query: 134 AAMIEIDVLQRLARHDI---------------------GG------TRYRSFPIDLVREL 166
               EI +L+ L   +I                     GG           F       +
Sbjct: 92  EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI 151

Query: 167 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
            +Q+L  + ++H+  ++H D+KPENILL +                              
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKN------------------------SLLN 187

Query: 227 IKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           IK++DFG ++F  +D+     + T +Y APEV+    +N  CD+WS G I+  L  G   
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           F    + +   ++++V              + + YF      DW                
Sbjct: 247 FGGQNDQD---IIKKVE-------------KGKYYFDFN---DWK--------------- 272

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                    ++   A +LI   + +L YD  +R  A EAL   +  +      
Sbjct: 273 ---------NISDEAKELI---KLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  129 bits (327), Expect = 2e-34
 Identities = 89/355 (25%), Positives = 139/355 (39%), Gaps = 95/355 (26%)

Query: 78  KDGHYVFAIGENL---TPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYRE 133
           K G Y   + +        Y   + +G G +G V    D    E VAIK + R       
Sbjct: 7   KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF 66

Query: 134 A--AMIEIDVLQRLARHD---------IGGTRYRSFP-IDLVRE-----LGR-------- 168
           A  A  E+ +L+ + +H+            +  R+F    LV       L +        
Sbjct: 67  AKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE 125

Query: 169 --------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
                   Q+L+ + ++H   ++H DLKP N+ +                          
Sbjct: 126 EKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE------------------------ 161

Query: 221 LPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVEL 278
                 +K++DFG +   + +   YVV TR YRAPEVIL     N   D+WSVGCI+ E+
Sbjct: 162 ---DCELKILDFGLARHADAEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217

Query: 279 CSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARLDWPDGATS 334
            +G+ LF+  + L+ L  + +V G P    +    D+ A+ Y +   +  R D+      
Sbjct: 218 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ---- 273

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                        P          A    DLL+ +L  D  +RL A +AL HPFF
Sbjct: 274 -----------LFPR-----ASPQA---ADLLEKMLELDVDKRLTAAQALTHPFF 309

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  128 bits (325), Expect = 2e-34
 Identities = 74/358 (20%), Positives = 120/358 (33%), Gaps = 113/358 (31%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVL 142
           +L  RY  L  +G G  G V    DN+  + VAIK +   +        RE     I ++
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALRE-----IKII 62

Query: 143 QRLARHD-----------------IGGTRYRSFP-IDLVRE-----LGR----------- 168
           +RL  HD                            + +V+E     L             
Sbjct: 63  RRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEH 121

Query: 169 ------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
                 QLL  + ++H   ++H DLKP N+ + +                          
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT-------------------------- 155

Query: 223 KSSAIKLIDFG--STTFEHQDHS-----YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCI 274
           +   +K+ DFG       H  H       +V T+ YR+P ++L    +    D+W+ GCI
Sbjct: 156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCI 214

Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR---RGARLDWPDG 331
             E+ +G+ LF     LE + ++   +  +              Y R             
Sbjct: 215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQ- 273

Query: 332 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                          LP      +   A   +D L+ +L + P +RL A EAL HP+ 
Sbjct: 274 --------------LLPG-----ISREA---VDFLEQILTFSPMDRLTAEEALSHPYM 309

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  129 bits (327), Expect = 3e-34
 Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 60/255 (23%)

Query: 142 LQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 201
           L ++ +  I     RS P++L+     QL  +V F+H L + H D+KP+N+L+       
Sbjct: 124 LHKVLKSFI--RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV------- 174

Query: 202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS--TTFEHQDH-SYVVSTRHYRAPEVIL 258
                             N  K + +KL DFGS       +   +Y+  +R YRAPE++L
Sbjct: 175 ------------------N-SKDNTLKLCDFGSAKKLIPSEPSVAYIC-SRFYRAPELML 214

Query: 259 GLGWNYPC--DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRA--DR 314
           G    Y    DLWS+GC+  EL  G+ LF    +++ L  + +++G  P    +      
Sbjct: 215 G-ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGT-PTKEQMIRMNPH 272

Query: 315 RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP 374
             E  F      DW              K+L          + +    IDLL+ +LRY+P
Sbjct: 273 YTEVRFPTLKAKDWR-------------KILP---------EGTPSLAIDLLEQILRYEP 310

Query: 375 AERLKAREALRHPFF 389
             R+   EA+ HPFF
Sbjct: 311 DLRINPYEAMAHPFF 325

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  126 bits (320), Expect = 5e-34
 Identities = 68/344 (19%), Positives = 114/344 (33%), Gaps = 111/344 (32%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQ 143
            ++   Y + + +G G++G+V        +   A K    I KY     +    EI++++
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEIMK 61

Query: 144 RLARHDI---------------------GG------TRYRSFPIDLVRELGRQLLESVAF 176
            L   +I                     GG         R F       + + +L +VA+
Sbjct: 62  SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
            H+L + H DLKPEN L ++                            S +KLIDFG   
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDS------------------------PDSPLKLIDFGLAA 157

Query: 237 FEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLE 292
                      V T +Y +P+V+ G  +   CD WS G ++  L  G   F   T   + 
Sbjct: 158 RFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV- 215

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
               M ++                           +P+           W          
Sbjct: 216 ----MLKIR---------------------EGTFTFPE---------KDWL--------- 232

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            +V   A  LI   + LL   P +R+ + +AL H +F + +   
Sbjct: 233 -NVSPQAESLI---RRLLTKSPKQRITSLQALEHEWFEKQLSSS 272

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  128 bits (324), Expect = 7e-34
 Identities = 87/356 (24%), Positives = 139/356 (39%), Gaps = 77/356 (21%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  RY+ L  +G G  G V   +D   +  VAIK + R   
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63

Query: 130 KYREA--AMIEIDVLQRLARHD--IG-------GTRYRSFP-IDLVRE-----LGR---- 168
               A  A  E+ +++ +  H   IG             F  + +V E     L +    
Sbjct: 64  NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 122

Query: 169 ------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
                       Q+L  +  +H   +IH DLKP NI++ S                    
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-------------------- 162

Query: 217 YFKNLPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 273
                     +K++DFG   +         YVV TR+YRAPEVILG+G+    D+WSVGC
Sbjct: 163 -------DCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 214

Query: 274 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 333
           I+ E+  G  LF   ++++    +   LG      + +       Y     +        
Sbjct: 215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK-------Y 267

Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
           +  S   ++  +  P    +H    A    DLL  +L  D ++R+   EAL+HP+ 
Sbjct: 268 AGYSFEKLFPDVLFPADS-EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  128 bits (324), Expect = 8e-34
 Identities = 88/354 (24%), Positives = 136/354 (38%), Gaps = 97/354 (27%)

Query: 81  HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--E 138
             V     ++ PRY  LS +GEG +G V   +DN  K  VAIK +              E
Sbjct: 16  EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE 75

Query: 139 IDVLQRLARHD--------IGGTRYRSFP-IDLVRE-----LGR---------------- 168
           I +L R  RH+        I          + +V++     L +                
Sbjct: 76  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134

Query: 169 -QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167

Query: 228 KLIDFG--STTFEHQDHS-----YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC 279
           K+ DFG         DH+     YV  TR YRAPE++L   G+    D+WSVGCIL E+ 
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226

Query: 280 SGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARLDWPDGATSR 335
           S   +F     L+ L  +  +LG P    +    + +A  Y        ++ W       
Sbjct: 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR----- 281

Query: 336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                       PN      D  A   +DLL  +L ++P +R++  +AL HP+ 
Sbjct: 282 ----------LFPN-----ADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYL 317

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  127 bits (322), Expect = 9e-34
 Identities = 78/334 (23%), Positives = 121/334 (36%), Gaps = 103/334 (30%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRL 145
           + L+  + + S++G G    V  C     ++  A+K    + K  +  ++  EI VL RL
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALK---VLKKTVDKKIVRTEIGVLLRL 105

Query: 146 ARHDI---------------------GG------TRYRSFPIDLVRELGRQLLESVAFMH 178
           +  +I                     GG           +      +  +Q+LE+VA++H
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 237
           E  ++H DLKPEN+L  +                            + +K+ DFG S   
Sbjct: 166 ENGIVHRDLKPENLLYATPA------------------------PDAPLKIADFGLSKIV 201

Query: 238 EHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           EHQ     V  T  Y APE++ G  +    D+WSVG I   L  G   F      +   M
Sbjct: 202 EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FM 259

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
             R+L               E YF       W +                        V 
Sbjct: 260 FRRIL-------------NCEYYFISP---WWDE------------------------VS 279

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
            +A DL+     L+  DP +RL   +AL+HP+ T
Sbjct: 280 LNAKDLVR---KLIVLDPKKRLTTFQALQHPWVT 310

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  126 bits (318), Expect = 1e-33
 Identities = 73/348 (20%), Positives = 111/348 (31%), Gaps = 113/348 (32%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-- 137
           G         +   +    K+G G FG V    +        IK    INK R    +  
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT---INKDRSQVPMEQ 66

Query: 138 ---EIDVLQRLA-------------RHDI--------GG----------TRYRSFPIDLV 163
              EI+VL+ L               H++        GG           R ++     V
Sbjct: 67  IEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYV 126

Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
            EL +Q++ ++A+ H   ++H DLKPENIL                              
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS------------------------P 162

Query: 224 SSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            S IK+IDFG       D        T  Y APEV       + CD+WS G ++  L +G
Sbjct: 163 HSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTG 221

Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
              F    +LE   + ++                 E  +      +              
Sbjct: 222 CLPFT-GTSLE--EVQQKAT-------------YKEPNYAV----EC------------- 248

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                      + +   A DL+   + +L  DP  R  A + L H +F
Sbjct: 249 -----------RPLTPQAVDLL---KQMLTKDPERRPSAAQVLHHEWF 282

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  125 bits (317), Expect = 1e-33
 Identities = 63/347 (18%), Positives = 94/347 (27%), Gaps = 133/347 (38%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-I- 150
            ++ +  +G G FGQV +       +   IK    +    E A  E+  L +L  H  I 
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAKL-DHVNIV 67

Query: 151 ------------------------------------GGT--------RYRSFPIDLVREL 166
                                                GT        R       L  EL
Sbjct: 68  HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127

Query: 167 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
             Q+ + V ++H  +LI+ DLKP NI L                                
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFL-----------------VDTKQ---------- 160

Query: 227 IKLIDFG-STTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
           +K+ DFG  T+ ++    +    T  Y +PE I    +    DL+++G IL EL     +
Sbjct: 161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HV 217

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
             T           R  G +                              +         
Sbjct: 218 CDTAFETSKFFTDLR-DGIISDIF-------------------------DKK-------- 243

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                               LLQ LL   P +R    E LR     +
Sbjct: 244 -----------------EKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  127 bits (321), Expect = 1e-33
 Identities = 64/341 (18%), Positives = 118/341 (34%), Gaps = 117/341 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEG+FG+ +     E      IK +       K RE +  E+ VL  + +H 
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHP 83

Query: 150 -I---------------------GGT--------RYRSFPIDLVRELGRQLLESVAFMHE 179
            I                     GG         +   F  D + +   Q+  ++  +H+
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 238
            +++H D+K +NI L                 +KDG+          ++L DFG +    
Sbjct: 144 RKILHRDIKSQNIFL-----------------TKDGT----------VQLGDFGIARVLN 176

Query: 239 HQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                    + T +Y +PE+     +N   D+W++GC+L ELC+ +  F+   ++++L +
Sbjct: 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVL 235

Query: 297 --MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
             +     P+  H                          S D                  
Sbjct: 236 KIISGSFPPVSLHY-------------------------SYD------------------ 252

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
                  L  L+  L + +P +R      L   F  + + +
Sbjct: 253 -------LRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEK 286

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  127 bits (322), Expect = 1e-33
 Identities = 88/360 (24%), Positives = 139/360 (38%), Gaps = 96/360 (26%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
            P  + G Y   + +    +   YR L  +G G +G V    D      VAIK + R   
Sbjct: 4   PPPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ 63

Query: 130 KYREA--AMIEIDVLQRLARHD---------IGGTRYRSFP-IDLVRE-----LGR---- 168
               A  A  E+ +L+ + RH+                 F    LV       LG+    
Sbjct: 64  SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122

Query: 169 -------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
                        Q+L+ + ++H   +IH DLKP N+ +                     
Sbjct: 123 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE------------------- 163

Query: 216 SYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGC 273
                      +K++DFG +   + +   YVV TR YRAPEVIL    +    D+WSVGC
Sbjct: 164 --------DCELKILDFGLARQADSEMTGYVV-TRWYRAPEVILNWMRYTQTVDIWSVGC 214

Query: 274 ILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARLDWP 329
           I+ E+ +G+ LF+  ++L+ L  + +V G P    +       A+ Y +      + D+ 
Sbjct: 215 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 274

Query: 330 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                            L N         A   ++LL+ +L  D  +R+ A EAL HP+F
Sbjct: 275 S---------------ILTN-----ASPLA---VNLLEKMLVLDAEQRVTAGEALAHPYF 311

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  125 bits (316), Expect = 2e-33
 Identities = 69/347 (19%), Positives = 114/347 (32%), Gaps = 108/347 (31%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR------EAAMIEIDV 141
              +  Y +  ++G+G F  V  C         A KI   IN  +      +    E  +
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI---INTKKLSARDFQKLEREARI 58

Query: 142 LQRLARHDI---------------------GG------TRYRSFPIDLVRELGRQLLESV 174
            ++L   +I                     GG           +         +Q+LES+
Sbjct: 59  CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
           A+ H   ++H +LKPEN+LL S                          K +A+KL DFG 
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKA------------------------KGAAVKLADFGL 154

Query: 235 TTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
               +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G   F   E+  
Sbjct: 155 AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF-WDED-- 211

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
              +  ++                          D+P            W          
Sbjct: 212 QHRLYAQIK---------------------AGAYDYPS---------PEWD--------- 232

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 399
             V   A  LID    +L  +P +R+ A +AL+ P+     R  + +
Sbjct: 233 -TVTPEAKSLID---SMLTVNPKKRITADQALKVPWICNRERVASAI 275

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  125 bits (316), Expect = 2e-33
 Identities = 53/339 (15%), Positives = 98/339 (28%), Gaps = 97/339 (28%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            +  L K+G G FG V +C       + AIK  +   + +   + A+ E+     L +H 
Sbjct: 12  EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71

Query: 150 ----------------I------GGT----------RYRSFPIDLVRELGRQLLESVAFM 177
                           I      GG+              F    +++L  Q+   + ++
Sbjct: 72  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H + L+H D+KP NI +           +                     K+ D G  T 
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN--------KVMFKIGDLGHVTR 183

Query: 238 EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                        + A EV+          D++++   +V     E L +  +    +  
Sbjct: 184 ISSPQV-EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ 242

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                G LP                                        R+P        
Sbjct: 243 -----GRLP----------------------------------------RIP-------Q 250

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
             + +  +LL+ ++  DP  R  A   ++H       R+
Sbjct: 251 VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASRK 289

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  127 bits (321), Expect = 3e-33
 Identities = 68/341 (19%), Positives = 115/341 (33%), Gaps = 102/341 (29%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLA 146
            ++   Y IL ++G G FG V  C +     +   K +       +     EI ++ +L 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 106

Query: 147 RHDI---------------------GG-------TRYRSFPIDLVRELGRQLLESVAFMH 178
              +                     GG                 V    RQ  E +  MH
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           E  ++H D+KPENI+  +                          K+S++K+IDFG  T  
Sbjct: 167 EHSIVHLDIKPENIMCET-------------------------KKASSVKIIDFGLATKL 201

Query: 239 HQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
           + D       +T  + APE++      +  D+W++G +   L SG + F   ++LE    
Sbjct: 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---T 258

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           ++ V                          ++ + A         +            V 
Sbjct: 259 LQNVK---------------------RCDWEFDEDA---------FS----------SVS 278

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             A D I   + LL+ +P +RL   +AL HP+   D    T
Sbjct: 279 PEAKDFI---KNLLQKEPRKRLTVHDALEHPWLKGDHSNLT 316

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  126 bits (319), Expect = 3e-33
 Identities = 69/351 (19%), Positives = 107/351 (30%), Gaps = 117/351 (33%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---------EAAMIEI 139
                Y +   +G+G F  V  C + E  +  A+KI   ++  +         E    E 
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKI---VDVAKFTSSPGLSTEDLKREA 77

Query: 140 DVLQRLARHDI---------------------GG----------TRYRSFPIDLVRELGR 168
            +   L    I                     G                +   +     R
Sbjct: 78  SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+LE++ + H+  +IH D+KP  +LL S E                         S+ +K
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVK 173

Query: 229 LIDFG-STTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 285
           L  FG +             V T H+ APEV+    +  P D+W  G IL  L SG   F
Sbjct: 174 LGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233

Query: 286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
                     + E ++             + +          W                 
Sbjct: 234 Y-GTKER---LFEGII-------------KGKYKMNPR---QWSH--------------- 258

Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                    +  SA DL+   + +L  DPAER+   EAL HP+     R  
Sbjct: 259 ---------ISESAKDLV---RRMLMLDPAERITVYEALNHPWLKERDRYA 297

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  128 bits (323), Expect = 3e-33
 Identities = 69/343 (20%), Positives = 117/343 (34%), Gaps = 103/343 (30%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI-EIDVLQ 143
               T  Y++  ++G+G F  V  C      +  A  I+  + ++      +  E  + +
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 144 RLARHDI---------------------GG------TRYRSFPIDLVRELGRQLLESVAF 176
            L   +I                     GG           +         +Q+LE+V  
Sbjct: 66  LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 235
            H++ ++H +LKPEN+LL S                          K +A+KL DFG + 
Sbjct: 126 CHQMGVVHRNLKPENLLLASKL------------------------KGAAVKLADFGLAI 161

Query: 236 TFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
             E +  ++     T  Y +PEV+    +  P DLW+ G IL  L  G   F   E+   
Sbjct: 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW-DEDQHR 220

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
           L   +++                   F      +W                         
Sbjct: 221 L--YQQIK-------------AGAYDFPSP---EWDT----------------------- 239

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            V   A DLI+    +L  +P++R+ A EAL+HP+ +      
Sbjct: 240 -VTPEAKDLIN---KMLTINPSKRITAAEALKHPWISHRSTVA 278

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  125 bits (316), Expect = 3e-33
 Identities = 67/370 (18%), Positives = 116/370 (31%), Gaps = 113/370 (30%)

Query: 68  TGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS 127
              PP             +G N    +RI  K+G G F +V           VA+K V+ 
Sbjct: 8   MQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQI 67

Query: 128 IN----KYREAAMIEIDVLQRLARH--------------------------DIG------ 151
            +    K R   + EID+L++L  H                          D+       
Sbjct: 68  FDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHF 126

Query: 152 GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
             + R  P   V +   QL  ++  MH  R++H D+KP N+ +                 
Sbjct: 127 KKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----------------- 169

Query: 212 SKDGSYFKNLPKSSAIKLIDFG-STTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDL 268
           +  G           +KL D G    F  +      +V T +Y +PE I   G+N+  D+
Sbjct: 170 TATGV----------VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219

Query: 269 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW 328
           WS+GC+L E+ + ++ F   + +   ++ +++                     +      
Sbjct: 220 WSLGCLLYEMAALQSPFYG-DKMNLYSLCKKIE--------------------QCDYPPL 258

Query: 329 PDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
           P    S                          +L  L+   +  DP +R           
Sbjct: 259 PSDHYSE-------------------------ELRQLVNMCINPDPEKRPDVTYVYDVAK 293

Query: 389 FTRDVRRPTL 398
                   +L
Sbjct: 294 RMHACTASSL 303

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  127 bits (321), Expect = 4e-33
 Identities = 78/346 (22%), Positives = 123/346 (35%), Gaps = 111/346 (32%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMI--E 138
           + L   Y +   +G G  G+V   F+ +  + VAI+I+        S  +   A  +  E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190

Query: 139 IDVLQRLARH-------------DI--------GG------TRYRSFPIDLVRELGRQLL 171
           I++L++L  H             D         GG         +       +    Q+L
Sbjct: 191 IEILKKL-NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249

Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
            +V ++HE  +IH DLKPEN+LL S E                        +   IK+ D
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITD 285

Query: 232 FGSTTFEHQDHSY--VVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQ 286
           FG +    +      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F 
Sbjct: 286 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
            H     +++ +++                        + ++            VW    
Sbjct: 346 EHRT--QVSLKDQIT---------------------SGKYNFIP---------EVWA--- 370

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                   V   A DL+     LL  DP  R    EALRHP+   +
Sbjct: 371 -------EVSEKALDLVK---KLLVVDPKARFTTEEALRHPWLQDE 406

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  124 bits (313), Expect = 5e-33
 Identities = 66/344 (19%), Positives = 111/344 (32%), Gaps = 105/344 (30%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDV 141
            +   Y +  ++G G F  V +C      +  A K ++            RE    E+++
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 142 LQRLA-------------RHDI--------GG------TRYRSFPIDLVRELGRQLLESV 174
           L+ +              + D+        GG          S   D   +  +Q+L+ V
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
            ++H  R+ H DLKPENI+L+                            +  IKLIDFG 
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKN-----------------------VPNPRIKLIDFGI 158

Query: 234 STTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
           +   E   +   +  T  + APE++         D+WS+G I   L SG + F      E
Sbjct: 159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
               +  +                          D+ +           +          
Sbjct: 219 ---TLTNIS---------------------AVNYDFDEEY---------FS--------- 236

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            +    A D I   + LL  DP  R+   ++L H +     RR 
Sbjct: 237 -NTSELAKDFI---RRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  125 bits (315), Expect = 7e-33
 Identities = 67/347 (19%), Positives = 114/347 (32%), Gaps = 105/347 (30%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 141 VLQRLA-------------RHDI--------GG------TRYRSFPIDLVRELGRQLLES 173
           +L+ +              + D+        GG          S   +   E  +Q+L  
Sbjct: 67  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           V ++H L++ H DLKPENI+L+                               IK+IDFG
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN-----------------------VPKPRIKIIDFG 163

Query: 234 -STTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
            +   +   +   +  T  + APE++         D+WS+G I   L SG + F      
Sbjct: 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
           E    +  V                          ++ D           +         
Sbjct: 224 E---TLANVS---------------------AVNYEFEDEY---------FS-------- 242

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
             +    A D I   + LL  DP +R+  +++L+HP+      +  L
Sbjct: 243 --NTSALAKDFI---RRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  126 bits (318), Expect = 7e-33
 Identities = 75/408 (18%), Positives = 130/408 (31%), Gaps = 126/408 (30%)

Query: 29  PPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGE 88
           P P P P   P             P       F     ++G    +    D + V    +
Sbjct: 11  PVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVT--SQ 68

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
            L          G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++ 
Sbjct: 69  VL----------GLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQC 114

Query: 149 -----------DIGGTRYRSFPIDLVREL--G------------------------RQLL 171
                      ++   R       +V E   G                        + + 
Sbjct: 115 PHIVRIVDVYENLYAGRKCLL---IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171

Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
           E++ ++H + + H D+KPEN+L  S                           ++ +KL D
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKR------------------------PNAILKLTD 207

Query: 232 FGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ-TH 288
           FG        +S      T +Y APEV+    ++  CD+WS+G I+  L  G   F   H
Sbjct: 208 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
                  M  R+             R  +  F      +W                    
Sbjct: 268 GLAISPGMKTRI-------------RMGQYEFPNP---EWS------------------- 292

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                 V      LI   + LL+ +P +R+   E + HP+  +  + P
Sbjct: 293 -----EVSEEVKMLI---RNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  125 bits (316), Expect = 8e-33
 Identities = 78/369 (21%), Positives = 124/369 (33%), Gaps = 110/369 (29%)

Query: 78  KDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
           K    +  +      +   Y +   +  G++G V    D+E    VAIK V +       
Sbjct: 5   KGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEG-IPVAIKRVFNTVSDGRT 63

Query: 135 AMI------------EIDVLQRLARHD--------IGGTRYRSFP-IDLVREL------- 166
             I            EI +L     H                +   + LV EL       
Sbjct: 64  VNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ 122

Query: 167 ----GR-------------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 209
                R              +L  +  +HE  ++H DL P NILL               
Sbjct: 123 VIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD------------- 169

Query: 210 RSSKDGSYFKNLPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYP 265
                         ++ I + DF      T +     YV   R YRAPE+++   G+   
Sbjct: 170 --------------NNDITICDFNLAREDTADANKTHYVT-HRWYRAPELVMQFKGFTKL 214

Query: 266 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRG- 323
            D+WS GC++ E+ + +ALF+       L  +  V+G P    +V+ +   A  Y R   
Sbjct: 215 VDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSL 274

Query: 324 ---ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA 380
                  W                  +P       D  A   +DL+  +L ++P  R+  
Sbjct: 275 SNVPARAWTA---------------VVPT-----ADPVA---LDLIAKMLEFNPQRRIST 311

Query: 381 REALRHPFF 389
            +ALRHP+F
Sbjct: 312 EQALRHPYF 320

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  124 bits (313), Expect = 1e-32
 Identities = 68/348 (19%), Positives = 115/348 (33%), Gaps = 105/348 (30%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           + +   Y I  ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 141 VLQRLARHDI---------------------GG------TRYRSFPIDLVRELGRQLLES 173
           +L+++  H++                     GG       +  S   +      +Q+L+ 
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           V ++H  ++ H DLKPENI+L+                               IKLIDFG
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFG 164

Query: 234 -STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
            +   E       +  T  + APE++         D+WS+G I   L SG + F      
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
           E    +  +                          D+ +           +         
Sbjct: 225 E---TLANIT---------------------SVSYDFDEEF---------FS-------- 243

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 399
             H    A D I   + LL  +  +RL  +EALRHP+ T    +  ++
Sbjct: 244 --HTSELAKDFI---RKLLVKETRKRLTIQEALRHPWITPVDNQQAMV 286

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  124 bits (314), Expect = 2e-32
 Identities = 85/427 (19%), Positives = 129/427 (30%), Gaps = 131/427 (30%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTG 69
             +++    R++ R         P            +  N   P    +  F    P   
Sbjct: 25  EIRHLPNLNREQRRAFIRSLRDDPSQSANLLA--EAKKLNDAQPKGTENLYFQSMGPEDE 82

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---- 125
            P W              +    +Y     +G G    V  C         A+KI+    
Sbjct: 83  LPDWAA-----------AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTA 131

Query: 126 -----RSINKYREAAMIEIDVLQRLARH-------DI---------------GG------ 152
                  + + REA   E  +L+++A H       D                 G      
Sbjct: 132 ERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL 191

Query: 153 TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 212
           T   +      R + R LLE+V+F+H   ++H DLKPENILL                  
Sbjct: 192 TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD---------------- 235

Query: 213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGL------GWNY 264
                      +  I+L DFG +           +  T  Y APE++         G+  
Sbjct: 236 -----------NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGK 284

Query: 265 PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 324
             DLW+ G IL  L +G   F  H     + M+  ++                       
Sbjct: 285 EVDLWACGVILFTLLAGSPPF-WHRR--QILMLRMIM---------------------EG 320

Query: 325 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
           +  +             W               +  DLI     LL+ DP  RL A +AL
Sbjct: 321 QYQFSSP---------EWD----------DRSSTVKDLIS---RLLQVDPEARLTAEQAL 358

Query: 385 RHPFFTR 391
           +HPFF R
Sbjct: 359 QHPFFER 365

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  126 bits (317), Expect = 2e-32
 Identities = 67/368 (18%), Positives = 108/368 (29%), Gaps = 112/368 (30%)

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN 129
           SP    DD D      I   +   +     +G G  G +V          VA+K +  + 
Sbjct: 4   SPSLEQDDGDEETSVVIVGKI--SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRI--LP 58

Query: 130 KYREAAMIEIDVLQRLARHD---------------------IGGT-------RYRSFPID 161
           +    A  E+ +L+    H                         T       +  +    
Sbjct: 59  ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL 118

Query: 162 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
               L +Q    +A +H L ++H DLKP NIL+                         N 
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISM----------------------PNA 156

Query: 222 PKSSAIKLIDFG-STTFEHQDHSY-----VVSTRHYRAPEVILGL---GWNYPCDLWSVG 272
                  + DFG         HS+     V  T  + APE++         Y  D++S G
Sbjct: 157 HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG 216

Query: 273 CILVE-LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 331
           C+    +  G   F   ++L+  A +      L                     L     
Sbjct: 217 CVFYYVISEGSHPF--GKSLQRQANILLGACSLDC-------------------LHPEK- 254

Query: 332 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                                 H D  A +LI   + ++  DP +R  A+  L+HPFF  
Sbjct: 255 ----------------------HEDVIARELI---EKMIAMDPQKRPSAKHVLKHPFFWS 289

Query: 392 DVRRPTLL 399
             ++    
Sbjct: 290 LEKQLQFF 297

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  123 bits (311), Expect = 2e-32
 Identities = 82/353 (23%), Positives = 123/353 (34%), Gaps = 111/353 (31%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMI-----E 138
           + L   Y +   +G G  G+V   F+ +  + VAIKI+     +I   REA        E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 139 IDVLQRLARH-------------DI--------GG------TRYRSFPIDLVRELGRQLL 171
           I++L++L  H             D         GG         +       +    Q+L
Sbjct: 66  IEILKKL-NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124

Query: 172 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 231
            +V ++HE  +IH DLKPEN+LL S E                        +   IK+ D
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITD 160

Query: 232 FGSTTFEHQDHSY--VVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQ 286
           FG +    +      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F 
Sbjct: 161 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
            H     L   +++                        + ++            VW    
Sbjct: 221 EHRTQVSL--KDQIT---------------------SGKYNFIP---------EVWA--- 245

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 399
                   V   A DL+     LL  DP  R    EALRHP+   +  +    
Sbjct: 246 -------EVSEKALDLVK---KLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ 288

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  124 bits (313), Expect = 2e-32
 Identities = 79/347 (22%), Positives = 137/347 (39%), Gaps = 103/347 (29%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEID 140
            +  RY+ LS +G G +G V   FD +    VA+K +    +        YRE     + 
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LR 80

Query: 141 VLQRLARHD--IG-------GTRYRSFP-IDLVREL----------------------GR 168
           +L+ + +H+  IG             F  + LV  L                        
Sbjct: 81  LLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           Q+L  + ++H   +IH DLKP N+ +                                +K
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNE---------------------------DCELK 172

Query: 229 LIDFG-STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 286
           ++DFG +     +   YV  TR YRAPE++L    +N   D+WSVGCI+ EL +G  LF 
Sbjct: 173 ILDFGLARHTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231

Query: 287 THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARLDWPDGATSRDSMRAVW 342
             ++++ L ++ R++G P    +   +   A  Y +   +  ++++ +            
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN------------ 279

Query: 343 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
                        +  A   +DLL+ +L  D  +R+ A +AL H +F
Sbjct: 280 ---VFIG-----ANPLA---VDLLEKMLVLDSDKRITAAQALAHAYF 315

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  124 bits (314), Expect = 2e-32
 Identities = 54/340 (15%), Positives = 99/340 (29%), Gaps = 92/340 (27%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARH-- 148
            + +   +G+G    V      +  +L AIK+    S  +  +  M E +VL++L  H  
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKN 68

Query: 149 -----DI-----------------GG---------TRYRSFPIDLVRELGRQLLESVAFM 177
                 I                  G         +     P      + R ++  +  +
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 236
            E  ++H ++KP NI+ V  E                          S  KL DFG +  
Sbjct: 129 RENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFGAARE 165

Query: 237 FEHQDHSY-VVSTRHYRAPEVILGLGWNYP--------CDLWSVGCILVELCSGEALFQT 287
            E  +    +  T  Y  P++                  DLWS+G       +G   F+ 
Sbjct: 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225

Query: 288 HENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
            E       +M +++   P   +      +         +DW        S+    ++L 
Sbjct: 226 FEGPRRNKEVMYKIITGKPSGAI------SGVQKAENGPIDWSGDMPVSCSLSRGLQVL- 278

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 386
                          L  +L  +L  D  +     +    
Sbjct: 279 ---------------LTPVLANILEADQEKCWGFDQFFAE 303

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  124 bits (312), Expect = 3e-32
 Identities = 66/348 (18%), Positives = 113/348 (32%), Gaps = 105/348 (30%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           + +   Y I  ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 141 VLQRLARHDI---------------------GG------TRYRSFPIDLVRELGRQLLES 173
           +L+++   +I                     GG       +  S   +      +Q+L+ 
Sbjct: 68  ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           V ++H  ++ H DLKPENI+L+                               IKLIDFG
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDFG 164

Query: 234 -STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
            +   E       +  T  + APE++         D+WS+G I   L SG + F   +  
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL-GDT- 222

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
                +  +                          D+ +           +         
Sbjct: 223 -KQETLANIT---------------------AVSYDFDEEF---------FS-------- 243

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 399
                  A D I   + LL  +  +RL  +EALRHP+ T    +  ++
Sbjct: 244 --QTSELAKDFI---RKLLVKETRKRLTIQEALRHPWITPVDTQQAMV 286

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  126 bits (319), Expect = 3e-32
 Identities = 74/336 (22%), Positives = 107/336 (31%), Gaps = 102/336 (30%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLA 146
           +++   Y I  ++G G FG V    +       A K V + ++  +E    EI  +  L 
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 212

Query: 147 R------HDI---------------GG-------TRYRSFPIDLVRELGRQLLESVAFMH 178
                  HD                GG         +     D   E  RQ+ + +  MH
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           E   +H DLKPENI+  +                          +S+ +KLIDFG T   
Sbjct: 273 ENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAHL 307

Query: 239 HQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
               S      T  + APEV  G    Y  D+WSVG +   L SG + F    + E    
Sbjct: 308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---T 364

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
           +  V                          +  D A         +            + 
Sbjct: 365 LRNVK---------------------SCDWNMDDSA---------FS----------GIS 384

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
               D I     LL  DP  R+   +AL HP+ T  
Sbjct: 385 EDGKDFIR---KLLLADPNTRMTIHQALEHPWLTPG 417

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  122 bits (308), Expect = 4e-32
 Identities = 75/356 (21%), Positives = 111/356 (31%), Gaps = 119/356 (33%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSINKYREAAMI 137
                 Y     +G G    V  C      +  A+KI+            + + REA + 
Sbjct: 13  HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72

Query: 138 EIDVLQRLARH-------DI---------------GG------TRYRSFPIDLVRELGRQ 169
           E+D+L++++ H       D                 G      T   +      R++ R 
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           LLE +  +H+L ++H DLKPENILL                                IKL
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDD---------------------------DMNIKL 165

Query: 230 IDFGSTTFEHQDHSY--VVSTRHYRAPEVILGL------GWNYPCDLWSVGCILVELCSG 281
            DFG +           V  T  Y APE+I         G+    D+WS G I+  L +G
Sbjct: 166 TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

Query: 282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 341
              F  H     + M+  ++                  F      +W             
Sbjct: 226 SPPF-WHRK--QMLMLRMIM-------------SGNYQFGSP---EWD------------ 254

Query: 342 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                           +  DL+      L   P +R  A EAL HPFF + V    
Sbjct: 255 ------------DYSDTVKDLVS---RFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  124 bits (313), Expect = 6e-32
 Identities = 84/370 (22%), Positives = 134/370 (36%), Gaps = 96/370 (25%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRL 145
           ++   Y I   +G G++G V   +D   ++ VAIK + R      +   I  EI +L RL
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82

Query: 146 ARHD--------IGGTRYRSFP-IDLVRELGR-----------------------QLLES 173
            + D        I       F  + +V E+                          LL  
Sbjct: 83  -KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDF 232
             F+HE  +IH DLKP N LL     VKV D  F L+R+         +      +    
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCD--FGLARTINSEKDTNIVNDLEENEEPGP 199

Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG---------- 281
            +   + Q  S+VV TR YRAPE+IL    +    D+WS GCI  EL +           
Sbjct: 200 HNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258

Query: 282 -EALFQ-----------------THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR- 321
              LF                     N + L ++  ++G P    +         KY + 
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKL 318

Query: 322 --RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK 379
                 ++                  + P+     +       I+LL+ +L+++P +R+ 
Sbjct: 319 FPHRKPINLKQ---------------KYPS-----ISDDG---INLLESMLKFNPNKRIT 355

Query: 380 AREALRHPFF 389
             +AL HP+ 
Sbjct: 356 IDQALDHPYL 365

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  121 bits (307), Expect = 1e-31
 Identities = 66/341 (19%), Positives = 104/341 (30%), Gaps = 106/341 (31%)

Query: 87  GENLTPRYRILSK-MGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVL 142
            EN    Y + SK +G G F  V +C      +  A K +   R     R   + EI VL
Sbjct: 23  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82

Query: 143 QRLARH------------------------------DIGGTRYRSFPIDLVRELGRQLLE 172
           +                                               + V  L +Q+LE
Sbjct: 83  ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            V ++H+  ++H DLKP+NILL S                              IK++DF
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIY------------------------PLGDIKIVDF 178

Query: 233 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
           G +           ++ T  Y APE++         D+W++G I   L +  + F   +N
Sbjct: 179 GMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238

Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
            E       +                         +D+ +           +        
Sbjct: 239 QE---TYLNIS---------------------QVNVDYSEET---------FS------- 258

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
               V   A D I   Q LL  +P +R  A   L H +  +
Sbjct: 259 ---SVSQLATDFI---QSLLVKNPEKRPTAEICLSHSWLQQ 293

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  125 bits (316), Expect = 1e-31
 Identities = 67/339 (19%), Positives = 107/339 (31%), Gaps = 92/339 (27%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH-- 148
            + +  ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L  H  
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPN 73

Query: 149 -----DI---------------------GG---------TRYRSFPIDLVRELGRQLLES 173
                ++                     GG                   +R L   +  +
Sbjct: 74  VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + ++HE R+IH DLKPENI+L                            +    K+ID G
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGP------------------------QRLIHKIIDLG 169

Query: 234 -STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 291
            +   +  +  +  V T  Y APE++    +    D WS G +  E  +G   F  +   
Sbjct: 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ- 228

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
                      P+  H  +R     EK        D   GA    S+      L      
Sbjct: 229 -----------PVQWHGKVR-----EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAG 272

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                         LQ +L +   +R    +      F 
Sbjct: 273 KLE---------RWLQCMLMWHQRQRGTDPQNPNVGCFQ 302

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  120 bits (302), Expect = 2e-31
 Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 126/350 (36%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
            Y +L  +G G++G+  +       +++  K +   +     ++  + E+++L+ L +H 
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHP 65

Query: 150 -I-----------------------GGT----------RYRSFPIDLVRELGRQLLESVA 175
            I                       GG             +    + V  +  QL  ++ 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125

Query: 176 FMHELRL-----IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 230
             H         +H DLKP N+ L                     +          +KL 
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFL-----------------DGKQN----------VKLG 158

Query: 231 DFG-STTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 287
           DFG +    H        V T +Y +PE +  + +N   D+WS+GC+L ELC+    F  
Sbjct: 159 DFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218

Query: 288 HENLEHLAM--MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 345
             + + LA    E     +P+                           S           
Sbjct: 219 -FSQKELAGKIREGKFRRIPYRY-------------------------SD---------- 242

Query: 346 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
                          +L +++  +L      R    E L +P        
Sbjct: 243 ---------------ELNEIITRMLNLKDYHRPSVEEILENPLILEHHHH 277

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  121 bits (304), Expect = 4e-31
 Identities = 43/243 (17%), Positives = 80/243 (32%), Gaps = 59/243 (24%)

Query: 93  RYRILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
              +   +GEG F QV E       D + K+   +K+ +  N +        ++ L+   
Sbjct: 66  LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSM 125

Query: 147 RHDI---------------------GGT-----------RYRSFPIDLVRELGRQLLESV 174
           +H                        GT             +  P  LV     ++L  +
Sbjct: 126 QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI 185

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 233
             +H+  +IH D+KP+N +L                 +           S+ + LID G 
Sbjct: 186 EQVHDCEIIHGDIKPDNFIL----------------GNGFLEQDDEDDLSAGLALIDLGQ 229

Query: 234 STTFEHQDHSYVVS----TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
           S   +      + +    T  ++  E++    WNY  D + V   +  +  G  +   +E
Sbjct: 230 SIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289

Query: 290 NLE 292
             E
Sbjct: 290 GGE 292

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  119 bits (299), Expect = 2e-30
 Identities = 75/362 (20%), Positives = 118/362 (32%), Gaps = 104/362 (28%)

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSK--MGEGTFGQVVECFDNEKKELVAIKIVR- 126
             P  P   D   V A    +   Y +     +G G FGQV +C +      +A KI++ 
Sbjct: 65  DIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT 124

Query: 127 SINKYREAAMIEIDVLQRLARHDI---------------------GG-------TRYRSF 158
              K +E    EI V+ +L   ++                     GG           + 
Sbjct: 125 RGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNL 184

Query: 159 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
                    +Q+ E +  MH++ ++H DLKPENIL V+                      
Sbjct: 185 TELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN---------------------- 222

Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
                +  IK+IDFG                T  + APEV+     ++P D+WSVG I  
Sbjct: 223 ---RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279

Query: 277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 336
            L SG + F    + E    +  +L                         ++ D      
Sbjct: 280 MLLSGLSPFLGDNDAE---TLNNIL-------------ACRWDLEDE---EFQD------ 314

Query: 337 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                             +   A + I     LL  + + R+ A EAL+HP+ +      
Sbjct: 315 ------------------ISEEAKEFI---SKLLIKEKSWRISASEALKHPWLSDHKLHS 353

Query: 397 TL 398
            L
Sbjct: 354 RL 355

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  117 bits (295), Expect = 4e-30
 Identities = 62/332 (18%), Positives = 94/332 (28%), Gaps = 114/332 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
                 ++G G+FG+V    D +     A+K VR         + E+     L       
Sbjct: 59  WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAGL-SSPRIV 113

Query: 150 -------------I------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                        I      GG       +    P D       Q LE + ++H  R++H
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--------STT 236
            D+K +N+LL                 S DGS            L DFG           
Sbjct: 174 GDVKADNVLL-----------------SSDGS---------RAALCDFGHALCLQPDGLG 207

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                  Y+  T  + APEV++G   +   D+WS  C+++ + +G               
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC-------------- 253

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                   P                      W              K+   P  I +   
Sbjct: 254 ------H-P----------------------WTQ----YFRGPLCLKIASEPPPIREIPP 280

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
             A      +Q  LR +P  R  A E  R   
Sbjct: 281 SCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  113 bits (284), Expect = 8e-29
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 132/348 (37%)

Query: 88  ENLTPRYRILSKM-GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
             +   Y++ S++ G G  G+V++ F+   +E  A+K+++   K R     E+++  R +
Sbjct: 13  NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRAS 68

Query: 147 RH-----------DIGGTRYRSFPIDLVREL---G-----------------------RQ 169
           +            ++   R       +V E    G                       + 
Sbjct: 69  QCPHIVRIVDVYENLYAGRKCLL---IVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           + E++ ++H + + H D+KPEN+L  S                           ++ +KL
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKR------------------------PNAILKL 161

Query: 230 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ-TH 288
            DFG                   A E   G  ++  CD+WS+G I+  L  G   F   H
Sbjct: 162 TDFG------------------FAKET-TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 202

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
                  M  R+                +  F      +W                    
Sbjct: 203 GLAISPGMKTRIR-------------MGQYEFPNP---EWS------------------- 227

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                 V      LI   + LL+ +P +R+   E + HP+  +  + P
Sbjct: 228 -----EVSEEVKMLI---RNLLKTEPTQRMTITEFMNHPWIMQSTKVP 267

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  111 bits (279), Expect = 3e-28
 Identities = 66/339 (19%), Positives = 117/339 (34%), Gaps = 111/339 (32%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            + I   +G+G FG V    + + K ++A+K++    + K      +  E+++   L RH
Sbjct: 10  DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 68

Query: 149 --------------DI--------GG------TRYRSFPIDLVRELGRQLLESVAFMHEL 180
                          +         G       +   F          +L  ++++ H  
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
           R+IH D+KPEN+LL                    G           +K+ DFG S     
Sbjct: 129 RVIHRDIKPENLLL-----------------GSAGE----------LKIADFGWSVHAPS 161

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
              + +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +    +    +R
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---TYQETYKR 218

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +          R +     +   GAR                                  
Sbjct: 219 IS---------RVEFTFPDFVTEGAR---------------------------------- 235

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
               DL+  LL+++P++R   RE L HP+ T +  +P+ 
Sbjct: 236 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  112 bits (281), Expect = 3e-28
 Identities = 62/352 (17%), Positives = 95/352 (26%), Gaps = 129/352 (36%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHD-I 150
            Y  + K+GEG F  V            A+K +    +  RE A  E D+ +    H  I
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNI 88

Query: 151 -------------------------GGT----------RYRSFPIDLVRELGRQLLESVA 175
                                     GT          +      D +  L   +   + 
Sbjct: 89  LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
            +H     H DLKP NILL                   +G             L+D GS 
Sbjct: 149 AIHAKGYAHRDLKPTNILL-----------------GDEGQP----------VLMDLGSM 181

Query: 236 TFEH------------QDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCS 280
                           QD +    T  YRAPE+         +   D+WS+GC+L  +  
Sbjct: 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF 241

Query: 281 GEALFQ-THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           GE  +    +  + +A            + ++                 P          
Sbjct: 242 GEGPYDMVFQKGDSVA------------LAVQNQLS------------IPQSPR------ 271

Query: 340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                            HS+  L  LL  ++  DP +R      L      +
Sbjct: 272 -----------------HSS-ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  111 bits (280), Expect = 7e-28
 Identities = 51/238 (21%), Positives = 81/238 (34%), Gaps = 80/238 (33%)

Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
             + RQ+  ++ ++H   + H D+KPEN L  +                          K
Sbjct: 171 SNIMRQIFSALHYLHNQGICHRDIKPENFLFST-------------------------NK 205

Query: 224 SSAIKLIDFG-STTFEHQDHSY------VVSTRHYRAPEVILGLGWNY--PCDLWSVGCI 274
           S  IKL+DFG S  F   ++           T ++ APEV+     +Y   CD WS G +
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265

Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
           L  L  G   F    N      + +VL                       +L + +    
Sbjct: 266 LHLLLMGAVPFP-GVN--DADTISQVL---------------------NKKLCFEN---- 297

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                  +            +   A DL+     LL  +  ER  A  AL+HP+ ++ 
Sbjct: 298 -----PNYN----------VLSPLARDLL---SNLLNRNVDERFDAMRALQHPWISQF 337

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  109 bits (276), Expect = 8e-28
 Identities = 61/336 (18%), Positives = 115/336 (34%), Gaps = 114/336 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            +++ + +G+G+F  V           VAIK++  +++ K      +  E+ +  +L +H
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KH 70

Query: 149 --------------DI--------GGT-------RYRSFPIDLVRELGRQLLESVAFMHE 179
                          +         G        R + F  +  R    Q++  + ++H 
Sbjct: 71  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 238
             ++H DL   N+LL                 +++ +          IK+ DFG +T  +
Sbjct: 131 HGILHRDLTLSNLLL-----------------TRNMN----------IKIADFGLATQLK 163

Query: 239 HQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                +     T +Y +PE+          D+WS+GC+   L  G   F T + +++   
Sbjct: 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT-DTVKNT-- 220

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
                                    +    D                   +P+     + 
Sbjct: 221 -----------------------LNKVVLAD-----------------YEMPS----FLS 236

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
             A DLI     LLR +PA+RL     L HPF +R+
Sbjct: 237 IEAKDLI---HQLLRRNPADRLSLSSVLDHPFMSRN 269

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  108 bits (273), Expect = 3e-27
 Identities = 74/341 (21%), Positives = 116/341 (34%), Gaps = 113/341 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
           RY     +G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + L  H
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AH 74

Query: 149 --------------DI--------GGT------RYRSFPIDLVRELGRQLLESVAFMHEL 180
                          +          +      R ++      R   RQ++    ++H  
Sbjct: 75  QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
           R+IH DLK  N+ L                 ++D            +K+ DFG +T  E+
Sbjct: 135 RVIHRDLKLGNLFL-----------------NEDLE----------VKIGDFGLATKVEY 167

Query: 240 QDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
                 V   T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T   L+     
Sbjct: 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCLK--ETY 224

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            R+                     +      P                        H++ 
Sbjct: 225 LRI---------------------KKNEYSIPK-----------------------HINP 240

Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
            A  LI   Q +L+ DP  R    E L   FFT       L
Sbjct: 241 VAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPARL 278

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  108 bits (272), Expect = 4e-27
 Identities = 62/347 (17%), Positives = 96/347 (27%), Gaps = 115/347 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD- 149
            +  +  +G G FG V E  +       AIK +R  +    RE  M E+  L +L  H  
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPG 64

Query: 150 ---------------------------I------GGT---------RYRSFPIDLVRELG 167
                                      I                          +   + 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 168 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSA 226
            Q+ E+V F+H   L+H DLKP NI     + VKV D  F L  +       + +     
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD--FGLVTAMDQDEEEQTVLTPMP 182

Query: 227 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
                       +  H+  V T+ Y +PE I G  +++  D++S+G IL EL      F 
Sbjct: 183 -----------AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP---FS 228

Query: 287 THENLEHLAM--MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
           T                 PL                                        
Sbjct: 229 TQMERVRTLTDVRNLKFPPLFTQ-------------------------KYPC-------- 255

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                ++                 +L   P ER +A   + +  F  
Sbjct: 256 --EYVMVQD---------------MLSPSPMERPEAINIIENAVFED 285

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  108 bits (272), Expect = 7e-27
 Identities = 60/268 (22%), Positives = 88/268 (32%), Gaps = 89/268 (33%)

Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDV 141
              +GE    R R+   + EG F  V E  D       A+K + S  +    A + E+  
Sbjct: 22  TVELGEL---RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF 78

Query: 142 LQRLARH---------------DIGGTRY-----------------------RSFPIDLV 163
           +++L+ H               +    +                             D V
Sbjct: 79  MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTV 138

Query: 164 RELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 221
            ++  Q   +V  MH  +  +IH DLK EN+LL                 S  G+     
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL-----------------SNQGTI---- 177

Query: 222 PKSSAIKLIDFGSTTFEHQDHSYVVS-----------TRH----YRAPEVI---LGLGWN 263
                 KL DFGS T       Y  S           TR+    YR PE+I         
Sbjct: 178 ------KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG 231

Query: 264 YPCDLWSVGCILVELCSGEALFQTHENL 291
              D+W++GCIL  LC  +  F+    L
Sbjct: 232 EKQDIWALGCILYLLCFRQHPFEDGAKL 259

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  108 bits (271), Expect = 1e-26
 Identities = 32/254 (12%), Positives = 59/254 (23%), Gaps = 70/254 (27%)

Query: 140 DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 199
           D+    +  D          I  +  L  QL+   A +    L+H    P+N+ +     
Sbjct: 173 DLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI----- 227

Query: 200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG 259
                         DG           + L D  +                Y   E +  
Sbjct: 228 ------------MPDGR----------LMLGDVSALWKVGTRGPASSVPVTYAPREFLNA 265

Query: 260 LGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 317
               +    + W +G  +  +      F                       +  + +R  
Sbjct: 266 STATFTHALNAWQLGLSIYRVWCLFLPFGLVTP-----------------GIKGSWKRPS 308

Query: 318 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER 377
                   L +       D ++                         L+   L +D   R
Sbjct: 309 LRVPGTDSLAFGSCTPLPDFVK------------------------TLIGRFLNFDRRRR 344

Query: 378 LKAREALRHPFFTR 391
           L   EA+  P F +
Sbjct: 345 LLPLEAMETPEFLQ 358

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  107 bits (269), Expect = 2e-26
 Identities = 85/405 (20%), Positives = 129/405 (31%), Gaps = 137/405 (33%)

Query: 29  PPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGE 88
           P P  P K              G+P  A       A P    P    D +          
Sbjct: 2   PAPADPGK-------------AGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRR------- 41

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQR 144
               RY     +G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + 
Sbjct: 42  ----RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS 97

Query: 145 LARH--------------DI--------GGT------RYRSFPIDLVRELGRQLLESVAF 176
           L  H               +          +      R ++      R   RQ++    +
Sbjct: 98  L-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQY 156

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 235
           +H  R+IH DLK  N+ L                 ++D            +K+ DFG +T
Sbjct: 157 LHRNRVIHRDLKLGNLFL-----------------NEDLE----------VKIGDFGLAT 189

Query: 236 TFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
             E+      V   T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T   L+ 
Sbjct: 190 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCLK- 247

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
                R+                     +      P                        
Sbjct: 248 -ETYLRI---------------------KKNEYSIPK----------------------- 262

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
           H++  A  LI   Q +L+ DP  R    E L   FFT       L
Sbjct: 263 HINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPARL 304

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  106 bits (266), Expect = 3e-26
 Identities = 60/335 (17%), Positives = 115/335 (34%), Gaps = 111/335 (33%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHD---------- 149
           G+GT+G V    D   +  +AIK +   +  Y +    EI + + L +H           
Sbjct: 31  GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFS 89

Query: 150 ------I------GGT-------RYRSFPID--LVRELGRQLLESVAFMHELRLIHTDLK 188
                 I      GG+       ++     +   +    +Q+LE + ++H+ +++H D+K
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS---TTFEHQDHSYV 245
            +N+L+                ++  G           +K+ DFG+       +      
Sbjct: 150 GDNVLI----------------NTYSGV----------LKISDFGTSKRLAGINPCTETF 183

Query: 246 VSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
             T  Y APE+I     G+    D+WS+GC ++E+ +G+  F  +E  E  A M      
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAM------ 235

Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
                           F+ G     P+                +P       +  + +  
Sbjct: 236 ----------------FKVGMFKVHPE----------------IP-------ESMSAEAK 256

Query: 364 DLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
             +      DP +R  A + L   F     ++   
Sbjct: 257 AFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKT 291

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  105 bits (265), Expect = 3e-26
 Identities = 63/358 (17%), Positives = 124/358 (34%), Gaps = 114/358 (31%)

Query: 74  RPDDKDGHYVFAIGENLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--- 129
           + DD +     A+G +   R+ +   ++G G+F  V +  D E    VA   ++      
Sbjct: 7   QQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK 66

Query: 130 KYREAAMIEIDVLQRLARHD-I-------------------------GGT------RYRS 157
             R+    E ++L+ L +H  I                          GT      R++ 
Sbjct: 67  SERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV 125

Query: 158 FPIDLVRELGRQLLESVAFMHE--LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 215
             I ++R   RQ+L+ + F+H     +IH DLK +NI +                +   G
Sbjct: 126 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI----------------TGPTG 169

Query: 216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
           S          +K+ D G  T +    +  V+ T  + APE+     ++   D+++ G  
Sbjct: 170 S----------VKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMC 218

Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
           ++E+ + E  +   +N     +  RV   +                              
Sbjct: 219 MLEMATSEYPYSECQNAA--QIYRRVTSGVK----------------------------- 247

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                        P    +       ++ ++++G +R +  ER   ++ L H FF  +
Sbjct: 248 -------------PASFDKVAIP---EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  104 bits (263), Expect = 6e-26
 Identities = 64/336 (19%), Positives = 109/336 (32%), Gaps = 111/336 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            + I   +G+G FG V    + + K ++A+K++    + K      +  EI++   L RH
Sbjct: 15  DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RH 73

Query: 149 --------------DI--------GG------TRYRSFPIDLVRELGRQLLESVAFMHEL 180
                          I         G       ++  F          +L +++ + HE 
Sbjct: 74  PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 239
           ++IH D+KPEN+L+                                +K+ DFG S     
Sbjct: 134 KVIHRDIKPENLLMGYKGE---------------------------LKIADFGWSVHAPS 166

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                +  T  Y  PE+I G   +   DLW  G +  E   G   F +     H     R
Sbjct: 167 LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP---SHTETHRR 223

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           ++           D +   +   G++                                  
Sbjct: 224 IV---------NVDLKFPPFLSDGSK---------------------------------- 240

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
               DL+  LLRY P +RL  +  + HP+   + RR
Sbjct: 241 ----DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  102 bits (255), Expect = 1e-24
 Identities = 48/240 (20%), Positives = 79/240 (32%), Gaps = 65/240 (27%)

Query: 152 GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSR 210
                     +   +  Q+ E+V F+H   L+H DLKP NI     + VKV D  F L  
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD--FGLVT 212

Query: 211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWS 270
           +       + +            +    +  H+  V T+ Y +PE I G  +++  D++S
Sbjct: 213 AMDQDEEEQTVL-----------TPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFS 261

Query: 271 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 330
           +G IL EL      F T         MERV                              
Sbjct: 262 LGLILFELLYS---FSTQ--------MERVR----------------------------- 281

Query: 331 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                     +   +R     +            ++Q +L   P ER +A + + +  F 
Sbjct: 282 ----------IITDVRNLKFPLLFTQKYP-QEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRL 145
           +  +  MG G FG V E  +       AIK +R  N+   RE  M E+  L +L
Sbjct: 8   FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  100 bits (251), Expect = 7e-24
 Identities = 62/332 (18%), Positives = 114/332 (34%), Gaps = 70/332 (21%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQR------- 144
           +  +S++G G  G V +        ++A K++    K      I  E+ VL         
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94

Query: 145 ------LARHDI--------GGT------RYRSFPIDLVRELGRQLLESVAFMH-ELRLI 183
                  +  +I        GG+      +    P  ++ ++   +++ + ++  + +++
Sbjct: 95  GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 154

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDH 242
           H D+KP NIL+                 +  G           IKL DFG S        
Sbjct: 155 HRDVKPSNILV-----------------NSRGE----------IKLCDFGVSGQLIDSMA 187

Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
           +  V TR Y +PE + G  ++   D+WS+G  LVE+  G       +  E   M    + 
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 247

Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL-RLPNLIMQHVDHSA-- 359
                   R                            A+++LL  + N     +      
Sbjct: 248 GDAAETPPRPRTPGRP---------LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS 298

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            +  D +   L  +PAER   ++ + H F  R
Sbjct: 299 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 99.4 bits (248), Expect = 2e-23
 Identities = 56/362 (15%), Positives = 111/362 (30%), Gaps = 118/362 (32%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI------------- 137
            YRI+  + +G F +++ C   +  +  A+K      + K R+                 
Sbjct: 32  DYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 138 ---EIDVLQRLARH--------------DI--------GG--------------TRYRSF 158
              E+ ++  + ++              ++                              
Sbjct: 90  FKNELQIITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148

Query: 159 PIDLVRELGRQLLESVAFMHELRLI-HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
           PI +++ + + +L S +++H  + I H D+KP NIL+                  K+G  
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM-----------------DKNGR- 190

Query: 218 FKNLPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGW--NYPCDLWSVGCI 274
                    +KL DFG S     +       T  +  PE             D+WS+G  
Sbjct: 191 ---------VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGIC 241

Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
           L  +      F    +L  + +   +                         +++P     
Sbjct: 242 LYVMFYNVVPFSLKISL--VELFNNIR---------------------TKNIEYPLDRNH 278

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
                   K            +  + + ID L+  LR +PAER+ + +AL+H +      
Sbjct: 279 FLYPLTNKKSTCSN-------NFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331

Query: 395 RP 396
             
Sbjct: 332 ED 333

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 58/342 (16%), Positives = 115/342 (33%), Gaps = 117/342 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLAR 147
            + ++  +GEG +G+V    +   +E VA+KI   ++  R          EI + + L  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI---VDMKRAVDCPENIKKEICINKML-N 63

Query: 148 H--------------DI--------GG------TRYRSFPIDLVRELGRQLLESVAFMHE 179
           H                        GG            P    +    QL+  V ++H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 238
           + + H D+KPEN+LL                   D     N      +K+ DFG +T F 
Sbjct: 124 IGITHRDIKPENLLL-------------------DER--DN------LKISDFGLATVFR 156

Query: 239 HQDHSYVVSTR----HYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEH 293
           + +   +++       Y APE++    ++  P D+WS G +L  + +GE  +    +   
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
                               +  + Y        W                        +
Sbjct: 217 E---------------YSDWKEKKTYL-----NPW------------------------K 232

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
            +D +    + LL  +L  +P+ R+   +  +  ++ + +++
Sbjct: 233 KIDSAP---LALLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 95.8 bits (238), Expect = 4e-22
 Identities = 36/251 (14%), Positives = 70/251 (27%), Gaps = 93/251 (37%)

Query: 152 GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 211
            + ++S       +L  Q++  +A +H   L+HT L+P +I+L                 
Sbjct: 197 SSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL----------------- 239

Query: 212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW--------- 262
            + G           + L  F     +         +R +  PE+               
Sbjct: 240 DQRGG----------VFLTGFEHLVRDGARVV-SSVSRGFEPPELEARRATISYHRDRRT 288

Query: 263 --NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYF 320
              +  D W++G ++  +   +    T +                          +E  F
Sbjct: 289 LMTFSFDAWALGLVIYWIWCADLPI-TKDAALGG---------------------SEWIF 326

Query: 321 RRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA 380
           R     + P                                   LL+G LRY   +RL  
Sbjct: 327 RS--CKNIPQPV------------------------------RALLEGFLRYPKEDRLLP 354

Query: 381 REALRHPFFTR 391
            +A+  P + +
Sbjct: 355 LQAMETPEYEQ 365

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 94.0 bits (234), Expect = 1e-21
 Identities = 72/352 (20%), Positives = 109/352 (30%), Gaps = 133/352 (37%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR--EAAMIEIDVLQRLAR--- 147
           +Y  +S +G G FG V    D EK + V +K    I K +  E   IE   L ++     
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKF---IKKEKVLEDCWIEDPKLGKVTLEIA 81

Query: 148 -----------------------------HDIGG------TRYRSFPIDLVRELGRQLLE 172
                                        H  G        R+      L   + RQL+ 
Sbjct: 82  ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
           +V ++    +IH D+K ENI++            F                   IKLIDF
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVI---------AEDF------------------TIKLIDF 174

Query: 233 GSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
           GS  +  +         T  Y APEV++G  +  P  ++WS+G  L  L   E  F   E
Sbjct: 175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE 234

Query: 290 NLEHLAMMERVLGPL--PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
                   E V   +  P+ +                         S++ M         
Sbjct: 235 --------ETVEAAIHPPYLV-------------------------SKELMS-------- 253

Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 399
                            L+ GLL+  P  R    + +  P+ T+ V      
Sbjct: 254 -----------------LVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYT 288

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 93.9 bits (234), Expect = 1e-21
 Identities = 58/345 (16%), Positives = 115/345 (33%), Gaps = 117/345 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLAR 147
            + ++  +GEG +G+V    +   +E VA+KI   ++  R          EI + + L  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI---VDMKRAVDCPENIKKEICINKML-N 63

Query: 148 H--------------DI--------GG------TRYRSFPIDLVRELGRQLLESVAFMHE 179
           H                        GG            P    +    QL+  V ++H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 238
           + + H D+KPEN+LL                   D     N      +K+ DFG +T F 
Sbjct: 124 IGITHRDIKPENLLL-------------------DER--DN------LKISDFGLATVFR 156

Query: 239 HQDHSYVVSTR----HYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEH 293
           + +   +++       Y APE++    ++  P D+WS G +L  + +GE  +    +   
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
                               +  + Y        W                        +
Sbjct: 217 E---------------YSDWKEKKTY-----LNPW------------------------K 232

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
            +D +    + LL  +L  +P+ R+   +  +  ++ + +++   
Sbjct: 233 KIDSAP---LALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 93.2 bits (232), Expect = 2e-21
 Identities = 69/341 (20%), Positives = 121/341 (35%), Gaps = 110/341 (32%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
              + +L K+GEG++G V +    E  ++VAIK V  +    +  + EI ++Q+     +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHV 86

Query: 151 GGTRYR-SF-----------------PIDLVRELG------------RQLLESVAFMHEL 180
              +Y  S+                   D++R               +  L+ + ++H +
Sbjct: 87  --VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TF 237
           R IH D+K  NILL                 + +G            KL DFG     T 
Sbjct: 145 RKIHRDIKAGNILL-----------------NTEGH----------AKLADFGVAGQLTD 177

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
                + V+ T  + APEVI  +G+N   D+WS+G   +E+  G+               
Sbjct: 178 TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK--------------- 222

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
                P P+  +                            MRA++ +   P    +  + 
Sbjct: 223 -----P-PYADI--------------------------HPMRAIFMIPTNPPPTFRKPEL 250

Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
            + +  D ++  L   P +R  A + L+HPF         L
Sbjct: 251 WSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSIL 291

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 94.0 bits (234), Expect = 2e-21
 Identities = 73/337 (21%), Positives = 108/337 (32%), Gaps = 105/337 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
           RY  +  +G G FG      D   KELVA+K +       E    EI    R  RH    
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH-RSLRHPNIV 79

Query: 149 ----------DI--------GG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                      +        GG           F  D  R   +QLL  V++ H +++ H
Sbjct: 80  RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 242
            DLK EN LL                   DGS          +K+ DFG +         
Sbjct: 140 RDLKLENTLL-------------------DGSPAPR------LKICDFGYSKSSVLHSQP 174

Query: 243 SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHL--AMMER 299
              V T  Y APEV+L   ++    D+WS G  L  +  G   F+            ++R
Sbjct: 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEEPRDYRKTIQR 233

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +L              + KY                           +P+ I       +
Sbjct: 234 IL--------------SVKY--------------------------SIPDDI-----RIS 248

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            +   L+  +   DPA R+   E   H +F +++   
Sbjct: 249 PECCHLISRIFVADPATRISIPEIKTHSWFLKNLPAD 285

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 92.0 bits (229), Expect = 4e-21
 Identities = 71/336 (21%), Positives = 122/336 (36%), Gaps = 108/336 (32%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
            +   +Y    K+G+G  G V    D    + VAI+ +    + ++  +I EI V++   
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75

Query: 147 RHDIGGTRYR-SFPI-----------------DLVRELG----------RQLLESVAFMH 178
             +I    Y  S+ +                 D+V E            R+ L+++ F+H
Sbjct: 76  NPNI--VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 235
             ++IH D+K +NILL                   DGS          +KL DFG     
Sbjct: 134 SNQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQI 166

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE             
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE------------- 213

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
                  P P+                           + + +RA++ +       +Q+ 
Sbjct: 214 -------P-PYL--------------------------NENPLRALYLIATNGTPELQNP 239

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           +  +    D L   L  D  +R  A+E L+H F   
Sbjct: 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 92.0 bits (229), Expect = 4e-21
 Identities = 65/336 (19%), Positives = 122/336 (36%), Gaps = 108/336 (32%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
            +         K+GEG+ G V    +      VA+K++    + R   +  E+ +++   
Sbjct: 41  GDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100

Query: 147 RHDIGGTRYR-SFPI-----------------DLVRELG----------RQLLESVAFMH 178
             ++       S+ +                 D+V ++             +L+++A++H
Sbjct: 101 HFNV--VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH 158

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 235
              +IH D+K ++ILL                 + DG           +KL DFG     
Sbjct: 159 AQGVIHRDIKSDSILL-----------------TLDGR----------VKLSDFGFCAQI 191

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           + +      +V T ++ APEVI    +    D+WS+G +++E+  GE             
Sbjct: 192 SKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE------------- 238

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
                  P P+                           S   ++A+ +L   P   +++ 
Sbjct: 239 -------P-PYF--------------------------SDSPVQAMKRLRDSPPPKLKNS 264

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
              +  L D L+ +L  DP ER  A+E L HPF  +
Sbjct: 265 HKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 91.1 bits (227), Expect = 5e-21
 Identities = 74/343 (21%), Positives = 108/343 (31%), Gaps = 117/343 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            Y +   +G GTFG+V           VA+KI+  + I        I  EI  L +L RH
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRH 70

Query: 149 --------------DI--------GG------TRYRSFPIDLVRELGRQLLESVAFMHEL 180
                         D         GG       ++        R L +Q+L +V + H  
Sbjct: 71  PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLKPEN+LL         D               N       K+ DFG +     
Sbjct: 131 MVVHRDLKPENVLL---------DAH------------MN------AKIADFGLSNMMSD 163

Query: 241 DHSYVVSTR----HYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHLA 295
                + T     +Y APEVI G  +  P  D+WS G IL  L  G   F   E++  L 
Sbjct: 164 GE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTL- 219

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
                        +        +Y  R                                 
Sbjct: 220 ----------FKKIRGGVFYIPEYLNRSVA------------------------------ 239

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
                    LL  +L+ DP +R   ++   H +F +D+     
Sbjct: 240 --------TLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF 274

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 91.6 bits (228), Expect = 6e-21
 Identities = 62/352 (17%), Positives = 114/352 (32%), Gaps = 123/352 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAM---IEIDVLQRLAR 147
           +Y +   +GEG++G+V E  D+E     A+KI+  + + +          EI +L+RL R
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-R 64

Query: 148 H----------------DI--------GGTR-------YRSFPIDLVRELGRQLLESVAF 176
           H                 +         G +        + FP+        QL++ + +
Sbjct: 65  HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 235
           +H   ++H D+KP N+LL                 +  G+          +K+   G + 
Sbjct: 125 LHSQGIVHKDIKPGNLLL-----------------TTGGT----------LKISALGVAE 157

Query: 236 TFEHQDHSYVVSTR----HYRAPEVILGLGWNY---PCDLWSVGCILVELCSGEALFQTH 288
                       T      ++ PE+  GL   +     D+WS G  L  + +G   F+  
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLD-TFSGFKVDIWSAGVTLYNITTGLYPFE-G 215

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
           +N+  L              + +                                     
Sbjct: 216 DNIYKL-----------FENIGKGSYAIPGDCGPPLS----------------------- 241

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 400
                          DLL+G+L Y+PA+R   R+  +H +F +        V
Sbjct: 242 ---------------DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 91.5 bits (228), Expect = 6e-21
 Identities = 65/327 (19%), Positives = 106/327 (32%), Gaps = 111/327 (33%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH-------- 148
           GEG+F  VV   +       AIKI+    I K  +      E DV+ RL  H        
Sbjct: 39  GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYF 97

Query: 149 --------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                            G       +  SF     R    +++ ++ ++H   +IH DLK
Sbjct: 98  TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK 157

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
           PENILL    ++++ D+      S +    +              + +F        V T
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQAR--------------ANSF--------VGT 195

Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 308
             Y +PE++         DLW++GCI+ +L +G   F    N     + ++++       
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGN--EYLIFQKII------- 245

Query: 309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
                             D+P+                                 DL++ 
Sbjct: 246 --------------KLEYDFPEKFFP--------------------------KARDLVEK 265

Query: 369 LLRYDPAERL------KAREALRHPFF 389
           LL  D  +RL             HPFF
Sbjct: 266 LLVLDATKRLGCEEMEGYGPLKAHPFF 292

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 91.2 bits (227), Expect = 1e-20
 Identities = 70/338 (20%), Positives = 117/338 (34%), Gaps = 112/338 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            Y I   +GEG+FG+V      + ++ VA+K +  + + K      +  EI  L +L RH
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL-KLLRH 68

Query: 149 --------------DI-------GG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                         DI       GG         +    D  R   +Q++ ++ + H  +
Sbjct: 69  PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H DLKPEN+LL         D               N      +K+ DFG +      
Sbjct: 129 IVHRDLKPENLLL---------DDN------------LN------VKIADFGLSNIMTDG 161

Query: 242 HSYVVS--TRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
           +    S  + +Y APEVI G  +  P  D+WS G +L  +  G   F   E + +L    
Sbjct: 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DEFIPNL---- 216

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
                     V         +   GA+                                 
Sbjct: 217 -------FKKVNSCVYVMPDFLSPGAQ--------------------------------- 236

Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                 L++ ++  DP +R+  +E  R P+F  ++   
Sbjct: 237 -----SLIRRMIVADPMQRITIQEIRRDPWFNVNLPDY 269

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 90.9 bits (226), Expect = 1e-20
 Identities = 55/238 (23%), Positives = 81/238 (34%), Gaps = 73/238 (30%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI-----EID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E         E+ 
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98

Query: 141 VLQRLARH---------DIGGTRYRSFPI----------------------DLVRELGRQ 169
           +L+++            D          I                      +L R    Q
Sbjct: 99  LLKKV-SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 157

Query: 170 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
           +LE+V   H   ++H D+K ENIL+         D                      +KL
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILI---------DLNRGE-----------------LKL 191

Query: 230 IDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNY---PCDLWSVGCILVELCSGE 282
           IDFGS     +D  Y     TR Y  PE I      Y      +WS+G +L ++  G+
Sbjct: 192 IDFGSGAL-LKDTVYTDFDGTRVYSPPEWIRYHR--YHGRSAAVWSLGILLYDMVCGD 246

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 90.1 bits (224), Expect = 2e-20
 Identities = 52/257 (20%), Positives = 82/257 (31%), Gaps = 73/257 (28%)

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RS 127
            PP  P            E     YR+   +G+G FG V        +  VAIK++    
Sbjct: 9   GPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNR 68

Query: 128 INKYREAAMI-----EIDVLQRLAR----------HDIGGTRYRSFPI------------ 160
           +  +   +       E+ +L ++             D   T+     +            
Sbjct: 69  VLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFD 128

Query: 161 ----------DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 210
                        R    Q++ ++   H   ++H D+K ENIL+                
Sbjct: 129 YITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI---------------- 172

Query: 211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNY---P 265
             + G            KLIDFGS      D  Y     TR Y  PE I      Y   P
Sbjct: 173 DLRRGC----------AKLIDFGSGAL-LHDEPYTDFDGTRVYSPPEWISRHQ--YHALP 219

Query: 266 CDLWSVGCILVELCSGE 282
             +WS+G +L ++  G+
Sbjct: 220 ATVWSLGILLYDMVCGD 236

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 89.7 bits (223), Expect = 3e-20
 Identities = 59/343 (17%), Positives = 118/343 (34%), Gaps = 119/343 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
            + ++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H    
Sbjct: 25  IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84

Query: 150 --IGGTRYRSFPI------------------DLVRELG-------------RQLLESVAF 176
              G    ++ P                   DL++                R++L  ++ 
Sbjct: 85  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--- 233
           +H+ ++IH D+K +N+LL                 +++            +KL+DFG   
Sbjct: 145 LHQHKVIHRDIKGQNVLL-----------------TENAE----------VKLVDFGVSA 177

Query: 234 STTFEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                    +  + T ++ APEVI         +++  DLWS+G   +E+  G       
Sbjct: 178 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP----- 232

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
                           P   +                            MRA++ + R P
Sbjct: 233 ----------------PLCDM--------------------------HPMRALFLIPRNP 250

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
              ++    S       ++  L  + ++R    + ++HPF   
Sbjct: 251 APRLKSKKWSK-KFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 88.1 bits (219), Expect = 8e-20
 Identities = 69/345 (20%), Positives = 123/345 (35%), Gaps = 115/345 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIG 151
            + I+ ++G+G FG+V +  + E   L A K++ + ++      I EI++L       I 
Sbjct: 20  VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI- 78

Query: 152 GTRYR-SFPI-----------------DLVRELG------------RQLLESVAFMHELR 181
             +   ++                    ++ EL             RQ+LE++ F+H  R
Sbjct: 79  -VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TFE 238
           +IH DLK  N+L+                 + +G           I+L DFG +      
Sbjct: 138 IIHRDLKAGNVLM-----------------TLEGD----------IRLADFGVSAKNLKT 170

Query: 239 HQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
            Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E           
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE----------- 219

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
                    P PHH +                          + MR + K+ +     + 
Sbjct: 220 ---------P-PHHEL--------------------------NPMRVLLKIAKSDPPTLL 243

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
                + +  D L+  L  +P  R  A + L HPF +       L
Sbjct: 244 TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKAL 288

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 87.8 bits (218), Expect = 1e-19
 Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 63/230 (27%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDI 150
            +  L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +
Sbjct: 23  LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82

Query: 151 GGTRYR-SF-----------------PIDLVRELG----------RQLLESVAFMHELRL 182
             T+Y  S+                  +DL+              R++L+ + ++H  + 
Sbjct: 83  --TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 239
           IH D+K  N+LL                 S+ G           +KL DFG     T   
Sbjct: 141 IHRDIKAANVLL-----------------SEHGE----------VKLADFGVAGQLTDTQ 173

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA-LFQTH 288
              +  V T  + APEVI    ++   D+WS+G   +EL  GE    + H
Sbjct: 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 89.0 bits (220), Expect = 1e-19
 Identities = 34/273 (12%), Positives = 74/273 (27%), Gaps = 90/273 (32%)

Query: 128 INKYREAAMIEIDVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
           ++++     ++ ++           + ++S       +L  Q++  +A +H   L+HT L
Sbjct: 178 LSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL 237

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----S 243
           +P +I+L                  + G           + L  F     +         
Sbjct: 238 RPVDIVL-----------------DQRGG----------VFLTGFEHLVRDGASAVSPIG 270

Query: 244 YVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
              +     A  ++           +  D W++G  +  +                    
Sbjct: 271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI-------------------- 310

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
                LP                  A                    L     I +   + 
Sbjct: 311 -WCADLP--------------NTDDA-------------------ALGGSEWIFRSCKNI 336

Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
              +  LL+G LRY   +RL   +A+  P + +
Sbjct: 337 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 64/360 (17%), Positives = 116/360 (32%), Gaps = 136/360 (37%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINK-------------------- 130
           +Y +  ++G+G++G V   ++       A+K++  + + +                    
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 131 ----------YREAA---MIE-------IDVLQRLARHDI--------GG-----TRYRS 157
                     Y+E A    ++       ++VL       +         G        + 
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133

Query: 158 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 217
              D  R   + L++ + ++H  ++IH D+KP N+L+                  +DG  
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV-----------------GEDGH- 175

Query: 218 FKNLPKSSAIKLIDFG-STTFEHQDH--SYVVSTRHYRAPEVILGLGWNY---PCDLWSV 271
                    IK+ DFG S  F+  D   S  V T  + APE +      +     D+W++
Sbjct: 176 ---------IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226

Query: 272 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 331
           G  L     G+  F   E +  L           H  +                      
Sbjct: 227 GVTLYCFVFGQCPFM-DERIMCL-----------HSKIKSQA------------------ 256

Query: 332 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                        L  P+      D +  DL DL+  +L  +P  R+   E   HP+ TR
Sbjct: 257 -------------LEFPD----QPDIAE-DLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 88.4 bits (219), Expect = 2e-19
 Identities = 56/350 (16%), Positives = 107/350 (30%), Gaps = 77/350 (22%)

Query: 94  YRILSKMGEG--TFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRL--- 145
           Y +L+ +G+G      V         E V ++ +      N+       E+ V +     
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86

Query: 146 --------------------------ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
                                     A+  I            +  + + +L+++ ++H 
Sbjct: 87  NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS----- 234
           +  +H  +K  +IL+                 S DG           + L    S     
Sbjct: 147 MGYVHRSVKASHILI-----------------SVDGK----------VYLSGLRSNLSMI 179

Query: 235 -----TTFEHQDHSYVVSTRHYRAPEVI--LGLGWNYPCDLWSVGCILVELCSGEALFQT 287
                    H    Y V    + +PEV+     G++   D++SVG    EL +G   F+ 
Sbjct: 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK- 238

Query: 288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 347
             ++    M+   L      ++  +   AE+     +R     G +   +          
Sbjct: 239 --DMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGD 296

Query: 348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                 H   S       ++  L+ +P  R  A   L H FF +  RR +
Sbjct: 297 SPSHPYHRTFSP-HFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 345

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 89.6 bits (222), Expect = 2e-19
 Identities = 64/335 (19%), Positives = 111/335 (33%), Gaps = 113/335 (33%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SI--NKYREAAMIEIDVLQRLARHDI 150
            +   +G G FG+V  C   +  ++ A+K +    I   +    A+ E  +L  ++  D 
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 251

Query: 151 ------------------------GG------TRYRSFPIDLVRELGRQLLESVAFMHEL 180
                                   GG      +++  F    +R    +++  +  MH  
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            +++ DLKP NILL    +V++ D                     A              
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGL------------------ACDFSKKKPHAS--- 350

Query: 241 DHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+  +   +   
Sbjct: 351 -----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 405

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
            L                        ++ PD  +                          
Sbjct: 406 TL---------------------TMAVELPDSFSP------------------------- 419

Query: 360 GDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
            +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 420 -ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 88.3 bits (219), Expect = 3e-19
 Identities = 73/339 (21%), Positives = 108/339 (31%), Gaps = 113/339 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            Y +   +G GTFG+V           VA+KI+  + I        I  EI  L +L RH
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL-KLFRH 75

Query: 149 --------------DI--------GG------TRYRSFPIDLVRELGRQLLESVAFMHEL 180
                         DI        GG       +         R L +Q+L  V + H  
Sbjct: 76  PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            ++H DLKPEN+LL         D               N       K+ DFG +     
Sbjct: 136 MVVHRDLKPENVLL---------DAH------------MN------AKIADFGLSNMMSD 168

Query: 241 DHSYVVS--TRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
                 S  + +Y APEVI G  +  P  D+WS G IL  L  G   F   +++  L   
Sbjct: 169 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD-DDHVPTL--- 224

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
                      +        +Y                                      
Sbjct: 225 --------FKKICDGIFYTPQYLNPSVI-------------------------------- 244

Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                  LL+ +L+ DP +R   ++   H +F +D+ + 
Sbjct: 245 ------SLLKHMLQVDPMKRATIKDIREHEWFKQDLPKY 277

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 86.3 bits (214), Expect = 5e-19
 Identities = 68/354 (19%), Positives = 117/354 (33%), Gaps = 128/354 (36%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQ 143
           ++    +  L ++G G+FG V    D    E+VAIK +    K           E+  LQ
Sbjct: 50  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109

Query: 144 RLARHDIGGTRYR-SF----------------PIDLVRELG------------RQLLESV 174
           +L   +    +YR  +                  DL+                   L+ +
Sbjct: 110 KLRHPNT--IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
           A++H   +IH D+K  NILL                 S+ G           +KL DFGS
Sbjct: 168 AYLHSHNMIHRDVKAGNILL-----------------SEPGL----------VKLGDFGS 200

Query: 235 -------TTFEHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEAL 284
                   +F        V T ++ APEVIL +    ++   D+WS+G   +EL   +  
Sbjct: 201 ASIMAPANSF--------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK-- 250

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
                             P P   +                          ++M A++ +
Sbjct: 251 ------------------P-PLFNM--------------------------NAMSALYHI 265

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
            +  +  +Q    S     + +   L+  P +R  +   L+H F  R+     +
Sbjct: 266 AQNESPALQSGHWSE-YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVI 318

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 86.2 bits (214), Expect = 6e-19
 Identities = 71/349 (20%), Positives = 113/349 (32%), Gaps = 118/349 (33%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR------EAAMIEID 140
            +     YR+L  +G+G F +V           VAIKI   I+K +      +    E+ 
Sbjct: 10  EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKI---IDKTQLNPTSLQKLFREVR 66

Query: 141 VLQRLARH-------DIGGTRYRSFPI----------DLVRELGR-----------QLLE 172
           +++ L  H       ++  T    + I          D +   GR           Q++ 
Sbjct: 67  IMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
           +V + H+ R++H DLK EN+LL                   D +          IK+ DF
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLL-----------------DADMN----------IKIADF 158

Query: 233 G-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 289
           G S  F              Y APE+  G  ++ P  D+WS+G IL  L SG   F   +
Sbjct: 159 GFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQ 217

Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 349
           NL+ L              V+R   R   Y                              
Sbjct: 218 NLKEL-----------RERVLRGKYRIPFYMSTDCE------------------------ 242

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
                         +LL+  L  +P +R    + ++  +         L
Sbjct: 243 --------------NLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 85.1 bits (211), Expect = 1e-18
 Identities = 60/355 (16%), Positives = 107/355 (30%), Gaps = 129/355 (36%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH--- 148
              L +MG GT GQV +    +   ++A+K +R     +  +  ++++DV+ +       
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86

Query: 149 -------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMH-ELRL 182
                                     +        P  ++ ++   +++++ ++  +  +
Sbjct: 87  VQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--------- 233
           IH D+KP NILL                  + G           IKL DFG         
Sbjct: 147 IHRDVKPSNILL-----------------DERGQ----------IKLCDFGISGRLVDDK 179

Query: 234 -STTFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGEA-LFQ 286
                             Y APE I         ++   D+WS+G  LVEL +G+     
Sbjct: 180 AKDRS--------AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
              + E L  +  +    P                                         
Sbjct: 232 CKTDFEVLTKV--LQEEPP----------------------------------------L 249

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVA 401
           LP     H+  S  D    ++  L  D  +R K  + L H F  R       + +
Sbjct: 250 LPG----HMGFSG-DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVAS 299

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 86.8 bits (215), Expect = 1e-18
 Identities = 60/337 (17%), Positives = 106/337 (31%), Gaps = 115/337 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQR----- 144
           +R+L   G G FG+V  C      +L A K +        K  + AM+E  +L +     
Sbjct: 190 FRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246

Query: 145 -------------------------LARH-DIGGTRYRSFPIDLVRELGRQLLESVAFMH 178
                                    +  H          F          Q++  +  +H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  +I+ DLKPEN+LL     V++ D       + +    +   K             + 
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGL----AVELKAGQTKTK------------GY- 349

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAMM 297
                    T  + APE++LG  +++  D +++G  L E+ +    F+   E +E+  + 
Sbjct: 350 -------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
           +RVL                        + +PD  +                        
Sbjct: 403 QRVL---------------------EQAVTYPDKFSP----------------------- 418

Query: 358 SAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
                 D  + LL+ DP +RL            HP F
Sbjct: 419 ---ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 82.8 bits (205), Expect = 7e-18
 Identities = 64/346 (18%), Positives = 114/346 (32%), Gaps = 114/346 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARH--- 148
            + L ++G G +G V +       +++A+K +RS    +E   +  ++DV+ R +     
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83

Query: 149 -----------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMH- 178
                                         +        P +++ ++    ++++  +  
Sbjct: 84  VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 237
            L++IH D+KP NILL                  + G+          IKL DFG S   
Sbjct: 144 NLKIIHRDIKPSNILL-----------------DRSGN----------IKLCDFGISGQL 176

Query: 238 EH-QDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEA-LFQTHENL 291
                 +     R Y APE I       G++   D+WS+G  L EL +G     + +   
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 351
           + L  +  V G  P                   +L   +      S              
Sbjct: 237 DQLTQV--VKGDPP-------------------QL--SNSEEREFSP------------- 260

Query: 352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                      I+ +   L  D ++R K +E L+HPF      R  
Sbjct: 261 ---------SFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAV 297

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 83.1 bits (206), Expect = 8e-18
 Identities = 58/333 (17%), Positives = 113/333 (33%), Gaps = 113/333 (33%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH-- 148
            IL  +G+G+FG+V     N+ K++ A+K +      +  E      E+ ++Q L  H  
Sbjct: 18  EILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPF 76

Query: 149 ------------------D--IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                             D  +GG       +   F  + V+    +L+ ++ ++   R+
Sbjct: 77  LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 241
           IH D+KP+NILL         D        + G           + + DF  +     + 
Sbjct: 137 IHRDMKPDNILL---------D--------EHGH----------VHITDFNIAAMLPRET 169

Query: 242 HSYVVS-TRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
               ++ T+ Y APE+     G G+++  D WS+G    EL  G   +    +     ++
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
                                       + +P   +                        
Sbjct: 230 HTFE---------------------TTVVTYPSAWSQ----------------------- 245

Query: 358 SAGDLIDLLQGLLRYDPAERL-KAREALRHPFF 389
              +++ LL+ LL  +P +R  +  +    P+ 
Sbjct: 246 ---EMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 82.3 bits (204), Expect = 2e-17
 Identities = 64/333 (19%), Positives = 114/333 (34%), Gaps = 115/333 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           +  +  +G G+FG+V+     E     A+KI+    + K ++    + E  +LQ +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFP 101

Query: 150 ----------------------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG       R   F     R    Q++ +  ++H L 
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           LI+ DLKPEN+L+    Y++V D+ F                    K +   + T     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGF-------------------AKRVKGRTWTL---- 198

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
                 T    APE+IL  G+N   D W++G ++ E+ +G   F   +    + + E+++
Sbjct: 199 ----CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQ--PIQIYEKIV 251

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                                  ++ +P   +S                          D
Sbjct: 252 ---------------------SGKVRFPSHFSS--------------------------D 264

Query: 362 LIDLLQGLLRYDPAERL-----KAREALRHPFF 389
           L DLL+ LL+ D  +R         +   H +F
Sbjct: 265 LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 82.9 bits (205), Expect = 3e-17
 Identities = 71/335 (21%), Positives = 108/335 (32%), Gaps = 114/335 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQR----- 144
           YR+L   G+G FG+V  C      ++ A K +        K    A+ E  +L++     
Sbjct: 189 YRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245

Query: 145 -------------------------LARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
                                    L  H I       FP         ++   +  +H 
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFH-IYHMGQAGFPEARAVFYAAEICCGLEDLHR 304

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
            R+++ DLKPENILL    ++++ D   L+    +G                        
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLG-LAVHVPEGQ----------------TIKGR-- 345

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                 V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       +ER
Sbjct: 346 ------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER 399

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                   +V        + F   AR                                  
Sbjct: 400 --------LVKEVPEEYSERFSPQAR---------------------------------- 417

Query: 360 GDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
                L   LL  DPAERL      ARE   HP F
Sbjct: 418 ----SLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 80.4 bits (199), Expect = 3e-17
 Identities = 57/353 (16%), Positives = 114/353 (32%), Gaps = 132/353 (37%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARH--- 148
              + ++G G +G V +       +++A+K +R+    +E   +  ++D+  R       
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68

Query: 149 -----------DI-------GG----------TRYRSFPIDLVRELGRQLLESVAFMH-E 179
                      D+                    + ++ P D++ ++   +++++  +H +
Sbjct: 69  VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------ 233
           L +IH D+KP N+L+                 +  G           +K+ DFG      
Sbjct: 129 LSVIHRDVKPSNVLI-----------------NALGQ----------VKMCDFGISGYLV 161

Query: 234 ----STTFEHQDHSYVVSTRHYRAPEVILG----LGWNYPCDLWSVGCILVELCSGEALF 285
                              + Y APE I       G++   D+WS+G  ++EL      +
Sbjct: 162 DDVAKDID--------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213

Query: 286 QTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
            +     + L  +  V  P P                   +L  P    S          
Sbjct: 214 DSWGTPFQQLKQV--VEEPSP-------------------QL--PADKFSA--------- 241

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
                           + +D     L+ +  ER    E ++HPFFT    + T
Sbjct: 242 ----------------EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 278

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 81.1 bits (201), Expect = 3e-17
 Identities = 62/334 (18%), Positives = 118/334 (35%), Gaps = 103/334 (30%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH- 148
           + +L  +G G++ +V+     +   + A+K+V+   +N   +      E  V ++ + H 
Sbjct: 11  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70

Query: 149 ---------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG       R R  P +  R    ++  ++ ++HE  
Sbjct: 71  FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N+LL S  ++K+ DY       K+G              +  G TT     
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGM----CKEG--------------LRPGDTT----- 167

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
            S    T +Y APE++ G  + +  D W++G ++ E+ +G + F    + ++        
Sbjct: 168 -STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP------- 219

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                      +     +                        +L     I + +   A  
Sbjct: 220 ---------DQNTEDYLF----------------------QVILEKQIRIPRSLSVKA-- 246

Query: 362 LIDLLQGLLRYDPAERL------KAREALRHPFF 389
              +L+  L  DP ERL         +   HPFF
Sbjct: 247 -ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 80.9 bits (200), Expect = 6e-17
 Identities = 61/334 (18%), Positives = 118/334 (35%), Gaps = 103/334 (30%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH- 148
           + +L  +G G++ +V+     +   + A+++V+   +N   +      E  V ++ + H 
Sbjct: 54  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113

Query: 149 ---------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG       R R  P +  R    ++  ++ ++HE  
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N+LL S  ++K+ DY       K+G              +  G TT     
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGM----CKEG--------------LRPGDTT----- 210

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
            S    T +Y APE++ G  + +  D W++G ++ E+ +G + F    + ++        
Sbjct: 211 -STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP------- 262

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                      +     +                        +L     I + +   A  
Sbjct: 263 ---------DQNTEDYLF----------------------QVILEKQIRIPRSLSVKA-- 289

Query: 362 LIDLLQGLLRYDPAERL------KAREALRHPFF 389
              +L+  L  DP ERL         +   HPFF
Sbjct: 290 -ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 81.6 bits (201), Expect = 7e-17
 Identities = 61/336 (18%), Positives = 110/336 (32%), Gaps = 117/336 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           +  L  +G+G+FG+V+        EL A+KI++      +   E  M+E  VL    +  
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402

Query: 150 ----------------------IGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG       +   F          ++   + F+    
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N++L S  ++K+ D+       K+               I  G TT     
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGM----CKEN--------------IWDGVTT----- 499

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
                 T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E   + + ++
Sbjct: 500 -KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSIM 555

Query: 302 G---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
                 P  M                         S+++                     
Sbjct: 556 EHNVAYPKSM-------------------------SKEA--------------------- 569

Query: 359 AGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
               + + +GL+   P +RL       R+   H FF
Sbjct: 570 ----VAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 79.7 bits (197), Expect = 8e-17
 Identities = 72/354 (20%), Positives = 118/354 (33%), Gaps = 131/354 (37%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDI 150
            Y +   +G G    V   +   KKE VAIK +         +  + EI  + +    +I
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75

Query: 151 GGTRYR-SF-----------------PIDLVRELG-------------------RQLLES 173
               Y  SF                  +D+++ +                    R++LE 
Sbjct: 76  --VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + ++H+   IH D+K  NILL                  +DGS          +++ DFG
Sbjct: 134 LEYLHKNGQIHRDVKAGNILL-----------------GEDGS----------VQIADFG 166

Query: 234 -----STTFEHQDHSY---VVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEAL 284
                +T  +   +      V T  + APEV+    G+++  D+WS G   +EL +G A 
Sbjct: 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA- 225

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
                               P+H          KY                  M+ +   
Sbjct: 226 --------------------PYH----------KY----------------PPMKVLMLT 239

Query: 345 LRL--PNLIMQHVDHSAG-----DLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           L+   P+L     D             ++   L+ DP +R  A E LRH FF +
Sbjct: 240 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 59/332 (17%), Positives = 110/332 (33%), Gaps = 113/332 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH- 148
           + +   +G+G+FG+V      +  +  AIK ++   +    +    M+E  VL     H 
Sbjct: 19  FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78

Query: 149 ---------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG           F +        +++  + F+H   
Sbjct: 79  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +++ DLK +NILL    ++K+ D+       K+               +   + T     
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGM----CKEN--------------MLGDAKT----- 175

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           +++   T  Y APE++LG  +N+  D WS G +L E+  G++ F   +  E   +   + 
Sbjct: 176 NTF-CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHSIR 231

Query: 302 G---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
                 P  +                          +++                     
Sbjct: 232 MDNPFYPRWL-------------------------EKEA--------------------- 245

Query: 359 AGDLIDLLQGLLRYDPAERLKAREALR-HPFF 389
                DLL  L   +P +RL  R  +R HP F
Sbjct: 246 ----KDLLVKLFVREPEKRLGVRGDIRQHPLF 273

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 73/325 (22%), Positives = 119/325 (36%), Gaps = 110/325 (33%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH-------- 148
           G+G+FG+V+      ++   A+K+++  +I K +E    M E +VL +  +H        
Sbjct: 47  GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHF 106

Query: 149 --------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 188
                           GG       R R F     R    ++  ++ ++H L +++ DLK
Sbjct: 107 SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLK 166

Query: 189 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 248
           PENILL S  ++ + D+       K+               I+  STT      S    T
Sbjct: 167 PENILLDSQGHIVLTDFGL----CKEN--------------IEHNSTT------STFCGT 202

Query: 249 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 308
             Y APEV+    ++   D W +G +L E+  G   F +    E   M + +L       
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNILN------ 253

Query: 309 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 368
                                             K L+L      ++ +SA     LL+G
Sbjct: 254 ----------------------------------KPLQLK----PNITNSA---RHLLEG 272

Query: 369 LLRYDPAERL----KAREALRHPFF 389
           LL+ D  +RL       E   H FF
Sbjct: 273 LLQKDRTKRLGAKDDFMEIKSHVFF 297

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 78.2 bits (193), Expect = 5e-16
 Identities = 61/336 (18%), Positives = 105/336 (31%), Gaps = 111/336 (33%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           IL  +G G F +V      +  ++ A+KI+    + K  E +    E DVL    R  I 
Sbjct: 65  ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWIT 124

Query: 152 GTRY----------------------------RSFPIDLVRELGRQLLESVAFMHELRLI 183
              +                               P ++ R    +++ ++  +H L  +
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYV 184

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KP+NILL    ++++ D+    +   DG                  S         
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADG---------------TVRSLVA------ 223

Query: 244 YVVSTRHYRAPEVILGLGWNY-------PCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
             V T  Y +PE++  +G           CD W++G    E+  G+  F   ++      
Sbjct: 224 --VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF-YADSTA--ET 278

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
             +++    H+                  L  P                           
Sbjct: 279 YGKIV----HYKE---------------HLSLPLVDEGVPE------------------- 300

Query: 357 HSAGDLIDLLQGLLRYDPAERL---KAREALRHPFF 389
               +  D +Q LL   P  RL    A +   HPFF
Sbjct: 301 ----EARDFIQRLLC-PPETRLGRGGAGDFRTHPFF 331

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 77.6 bits (192), Expect = 5e-16
 Identities = 75/335 (22%), Positives = 120/335 (35%), Gaps = 116/335 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH- 148
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ   RH 
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65

Query: 149 ---------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG      +R R F  +  R  G +++ ++ ++H   
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +++ D+K EN++L    ++K+ D+       K+G              I  G+T      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGL----CKEG--------------ISDGATM----- 162

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMER 299
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 163 -KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
           +    P  +                         S ++                      
Sbjct: 222 I--RFPRTL-------------------------SPEA---------------------- 232

Query: 360 GDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
                LL GLL+ DP +RL      A+E + H FF
Sbjct: 233 ---KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 77.7 bits (192), Expect = 6e-16
 Identities = 60/336 (17%), Positives = 111/336 (33%), Gaps = 117/336 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH- 148
           +  L  +G+G+FG+V+        EL A+KI++   + +  +    M+E  VL    +  
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81

Query: 149 ---------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG       +   F          ++   + F+    
Sbjct: 82  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N++L S  ++K+ D+       K+               I  G TT     
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGM----CKEN--------------IWDGVTT----- 178

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
                 T  Y APE+I    +    D W+ G +L E+ +G+A F   E+ +   + + ++
Sbjct: 179 -KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDE--LFQSIM 234

Query: 302 G---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
                 P  M                         S+++                     
Sbjct: 235 EHNVAYPKSM-------------------------SKEA--------------------- 248

Query: 359 AGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
               + + +GL+   P +RL       R+   H FF
Sbjct: 249 ----VAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 77.2 bits (191), Expect = 6e-16
 Identities = 63/340 (18%), Positives = 112/340 (32%), Gaps = 120/340 (35%)

Query: 92  PRYRI-----LSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVL 142
           P+Y +     L  +G G+FG+V            A+K+++   + + ++      E  +L
Sbjct: 1   PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60

Query: 143 QRLARHD----------------------IGG------TRYRSFPIDLVRELGRQLLESV 174
             +  H                        GG       + + FP  + +    ++  ++
Sbjct: 61  SIV-THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 119

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++H   +I+ DLKPENILL    ++K+ D+ F                    K +   +
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGF-------------------AKYVPDVT 160

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
            T           T  Y APEV+    +N   D WS G ++ E+ +G   F    N   +
Sbjct: 161 YTL--------CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSN--TM 209

Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
              E++L                      A L +P                         
Sbjct: 210 KTYEKIL---------------------NAELRFP-----------------------PF 225

Query: 355 VDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
            +       DLL  L+  D ++RL        +   HP+F
Sbjct: 226 FNEDV---KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 77.8 bits (192), Expect = 7e-16
 Identities = 63/331 (19%), Positives = 112/331 (33%), Gaps = 107/331 (32%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDI- 150
           ++  +G G FG+V        +++ A+K++    + K  ++A    E D++       + 
Sbjct: 73  VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132

Query: 151 --------------------GG-----TRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
                               GG           P    R    +++ ++  +H +  IH 
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192

Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
           D+KP+N+LL  + ++K+ D+    + +K+G                    T         
Sbjct: 193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEG---------------MVRCDTA-------- 229

Query: 246 VSTRHYRAPEVILGLGWNYP----CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           V T  Y +PEV+   G +      CD WSVG  L E+  G+  F   ++L       +++
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSLV--GTYSKIM 286

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
               +H                  L +PD                         D S  +
Sbjct: 287 ----NHKN---------------SLTFPD-----------------------DNDISK-E 303

Query: 362 LIDLLQGLLRYDPAERLK---AREALRHPFF 389
             +L+   L  D   RL      E  RH FF
Sbjct: 304 AKNLICAFLT-DREVRLGRNGVEEIKRHLFF 333

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 77.3 bits (191), Expect = 7e-16
 Identities = 63/337 (18%), Positives = 114/337 (33%), Gaps = 118/337 (35%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH- 148
           +  +  +G+G+FG+V+     E  +L A+K+++   I +  +    M E  +L     H 
Sbjct: 25  FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84

Query: 149 ---------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG       + R F     R    +++ ++ F+H+  
Sbjct: 85  FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG 144

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +I+ DLK +N+LL    + K+ D+  +    K+G              I  G TT     
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADF-GM---CKEG--------------ICNGVTT----- 181

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
            +    T  Y APE++  + +    D W++G +L E+  G A F+     +   + E +L
Sbjct: 182 -ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LFEAIL 237

Query: 302 G---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
                 P  +                           D+                     
Sbjct: 238 NDEVVYPTWL-------------------------HEDA--------------------- 251

Query: 359 AGDLIDLLQGLLRYDPAERL------KAREALRHPFF 389
                 +L+  +  +P  RL           LRHPFF
Sbjct: 252 ----TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 77.6 bits (191), Expect = 1e-15
 Identities = 55/314 (17%), Positives = 96/314 (30%), Gaps = 80/314 (25%)

Query: 18  PRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDD 77
           P   P       P +P  K      C +  G         S    G  P  GSP      
Sbjct: 16  PDIDPLEALMTNPVVPESKRFCW-NCGRPVGRSDSETKGASE---GWCPYCGSPYSFLPQ 71

Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSIN--KYREA 134
                    G+ +  +Y +   +  G  G +    D N     V +K +      + +  
Sbjct: 72  ------LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAM 125

Query: 135 AMIEIDVLQRL------ARHDIG--------GTRY----------------RSFPIDLVR 164
           AM E   L  +         +             Y                +  P+    
Sbjct: 126 AMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAI 185

Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
               ++L +++++H + L++ DLKPENI+L                 +++          
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIML-----------------TEEQ--------- 219

Query: 225 SAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
             +KLID G             Y+  T  ++APE++   G     D+++VG  L  L   
Sbjct: 220 --LKLIDLGAVSRIN----SFGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLD 272

Query: 282 EALFQTHENLEHLA 295
                    ++ L 
Sbjct: 273 LPTR-NGRYVDGLP 285

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 62/335 (18%), Positives = 114/335 (34%), Gaps = 111/335 (33%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD-- 149
           IL  +G G FG+V         ++ A+KI+    + K  E A    E DVL         
Sbjct: 78  ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWI 136

Query: 150 --------------------IGG------TRYRS-FPIDLVRELGRQLLESVAFMHELRL 182
                               +GG      +++    P ++ R    +++ ++  +H+L  
Sbjct: 137 TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY 196

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H D+KP+NIL+    ++++ D+    +  +DG                  S+       
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG---------------TVQSSVA----- 236

Query: 243 SYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
              V T  Y +PE++  +      +   CD WS+G  + E+  GE  F   E+L      
Sbjct: 237 ---VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF-YAESLV--ETY 290

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
            +++                       R  +P                         V  
Sbjct: 291 GKIM-------------------NHKERFQFP-----------------------TQVTD 308

Query: 358 SAGDLIDLLQGLLRYDPAERL---KAREALRHPFF 389
            + +  DL++ L+      RL      +  +HPFF
Sbjct: 309 VSENAKDLIRRLIC-SREHRLGQNGIEDFKKHPFF 342

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 65/333 (19%), Positives = 115/333 (34%), Gaps = 114/333 (34%)

Query: 101 GEGTFGQVV---ECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARH---- 148
           G G +G+V    +   ++  +L A+K+++        K  E    E  VL+ + +     
Sbjct: 63  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLV 122

Query: 149 ----------------D--IGG------TRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                           D   GG      ++   F    V+    +++ ++  +H+L +I+
Sbjct: 123 TLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIY 182

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K ENILL S  +V + D+      SK+              + D          + +
Sbjct: 183 RDIKLENILLDSNGHVVLTDFGL----SKEF-------------VADETERA-----YDF 220

Query: 245 VVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQT-HENLEHLAMMERVL 301
              T  Y AP+++ G   G +   D WS+G ++ EL +G + F    E      +  R+L
Sbjct: 221 -CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                                 +   +P   ++                           
Sbjct: 280 ---------------------KSEPPYPQEMSA--------------------------L 292

Query: 362 LIDLLQGLLRYDPAERL-----KAREALRHPFF 389
             DL+Q LL  DP +RL      A E   H FF
Sbjct: 293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 75.9 bits (187), Expect = 3e-15
 Identities = 75/336 (22%), Positives = 122/336 (36%), Gaps = 117/336 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARH- 148
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 208

Query: 149 ---------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                  GG      +R R F  D  R  G +++ ++ ++H  +
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268

Query: 182 -LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 240
            +++ DLK EN++L    ++K+ D+       K+G              I  G+T     
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGL----CKEG--------------IKDGATM---- 306

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 298
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 307 --KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 364

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
            +    P  +                           ++                     
Sbjct: 365 EI--RFPRTL-------------------------GPEA--------------------- 376

Query: 359 AGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
                 LL GLL+ DP +RL      A+E ++H FF
Sbjct: 377 ----KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 74.7 bits (184), Expect = 4e-15
 Identities = 54/234 (23%), Positives = 85/234 (36%), Gaps = 62/234 (26%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD------ 149
           +   +G G FG V  C    + + VAIK + S    R+A ++E+  L R+  H       
Sbjct: 12  VEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV-NHPNIVKLY 67

Query: 150 --------------IGGTRYR---------SFPIDLVRELGRQLLESVAFMHELR---LI 183
                          GG+ Y           +          Q  + VA++H ++   LI
Sbjct: 68  GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DLKP N+LLV+   V                          +K+ DFG+        +
Sbjct: 128 HRDLKPPNLLLVAGGTV--------------------------LKICDFGTACDIQTHMT 161

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
               +  + APEV  G  ++  CD++S G IL E+ +    F          M 
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW 215

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 74.1 bits (183), Expect = 6e-15
 Identities = 67/339 (19%), Positives = 125/339 (36%), Gaps = 122/339 (35%)

Query: 95  RILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRS---INKYREAA--MIEIDVLQRLA 146
            +L  +G+G +G+V    +       ++ A+K+++    +   ++ A    E ++L+   
Sbjct: 20  ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-V 78

Query: 147 RH----------------------DIGG------TRYRSFPIDLVRELGRQLLESVAFMH 178
           +H                        GG       R   F  D       ++  ++  +H
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           +  +I+ DLKPENI+L    +VK+ D+       K+               I  G+ T  
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGL----CKES--------------IHDGTVT-- 178

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
              H++   T  Y APE+++  G N   D WS+G ++ ++ +G   F T EN +    ++
Sbjct: 179 ---HTFC-GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGENRK--KTID 231

Query: 299 RVLG---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           ++L     LP ++                         ++++                  
Sbjct: 232 KILKCKLNLPPYL-------------------------TQEA------------------ 248

Query: 356 DHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
                   DLL+ LL+ + A RL      A E   HPFF
Sbjct: 249 -------RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 74/344 (21%), Positives = 117/344 (34%), Gaps = 136/344 (39%)

Query: 96  ILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARH- 148
           +L  +G+G+FG+V    +   ++ ++L A+K+++      + R    +E D+L     H 
Sbjct: 28  LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-VNHP 86

Query: 149 -------------------D--IGG------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
                              D   GG      ++   F  + V+    +L  ++  +H L 
Sbjct: 87  FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-------- 233
           +I+ DLKPENILL                  ++G           IKL DFG        
Sbjct: 147 IIYRDLKPENILL-----------------DEEGH----------IKLTDFGLSKESIDH 179

Query: 234 ---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
              + +F          T  Y APEV+   G     D WS G ++ E+ +G   FQ  + 
Sbjct: 180 EKKAYSF--------CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231

Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
            E    M  +L                                           L +P  
Sbjct: 232 KE---TMTMILK----------------------------------------AKLGMP-- 246

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 389
             Q +   A     LL+ L + +PA RL        E  RH FF
Sbjct: 247 --QFLSPEA---QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 51/243 (20%), Positives = 83/243 (34%), Gaps = 61/243 (25%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLARHD 149
            +   +G G FG+V   F    +  VA+K  R       +  I     E  +   L +H 
Sbjct: 10  TLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAML-KHP 66

Query: 150 ----------------------IGGT-----RYRSFPIDLVRELGRQLLESVAFMHE--- 179
                                  GG        +  P D++     Q+   + ++H+   
Sbjct: 67  NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
           + +IH DLK  NIL+                             +  +K+ DFG     H
Sbjct: 127 VPIIHRDLKSSNILI-------------------LQKVENGDLSNKILKITDFGLAREWH 167

Query: 240 QDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
           +           + APEVI    ++   D+WS G +L EL +GE  F     ++ LA+  
Sbjct: 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF---RGIDGLAVAY 224

Query: 299 RVL 301
            V 
Sbjct: 225 GVA 227

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 71.2 bits (175), Expect = 5e-14
 Identities = 43/240 (17%), Positives = 75/240 (31%), Gaps = 65/240 (27%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--------EIDVLQRLAR 147
              ++G+G FG V +    + K +VAIK +   +   E  MI        E+ ++  L  
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81

Query: 148 HD--------------------IGGT-------RYRSFPIDLVRELGRQLLESVAFMHEL 180
           H                       G        +       +   L   +   + +M   
Sbjct: 82  HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141

Query: 181 R--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              ++H DL+  NI L S                       +       K+ DFG +   
Sbjct: 142 NPPIVHRDLRSPNIFLQS----------------------LDENAPVCAKVADFGLSQQS 179

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
               S ++    + APE I     +Y    D +S   IL  + +GE  F   +   +  +
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF---DEYSYGKI 236

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 58/269 (21%), Positives = 88/269 (32%), Gaps = 90/269 (33%)

Query: 63  GAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAI 122
           G +PR        + ++G   F         YR+   +G G  G V E  D  ++ +VA+
Sbjct: 13  GLVPRGSHMDGTAESREG-TQFG-------PYRLRRLVGRGGMGDVYEAEDTVRERIVAL 64

Query: 123 KIVRS--------INKY-REAAMIEIDVLQRLAR---------HDIG---GTRY------ 155
           K++            +  REA        +   R         HD G   G  Y      
Sbjct: 65  KLMSETLSSDPVFRTRMQREA--------RTAGRLQEPHVVPIHDFGEIDGQLYVDMRLI 116

Query: 156 ----------RSFPIDLVR--ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP 203
                     R  P+   R   + RQ+  ++   H     H D+KPENIL+         
Sbjct: 117 NGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV--------- 167

Query: 204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------STTFEHQDHSYVVSTRHYRAPEVI 257
                   S D              L+DFG                  V T +Y APE  
Sbjct: 168 --------SADD----------FAYLVDFGIASATTDEKLTQ--LGNTVGTLYYMAPERF 207

Query: 258 LGLGWNYPCDLWSVGCILVELCSGEALFQ 286
                 Y  D++++ C+L E  +G   +Q
Sbjct: 208 SESHATYRADIYALTCVLYECLTGSPPYQ 236

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 49/242 (20%), Positives = 86/242 (35%), Gaps = 82/242 (33%)

Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKY-REAAM 136
           IG+ +  RY+I+ K+G G    V    D      VAIK +          + ++ RE   
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREV-- 62

Query: 137 IEIDVLQRLAR---------HDIG---GTRY------------------RSFPIDLVREL 166
                    ++          D+       Y                      +D     
Sbjct: 63  ------HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116

Query: 167 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
             Q+L+ +   H++R++H D+KP+NIL+                   + +          
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILI-----------------DSNKT---------- 149

Query: 227 IKLIDFG------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
           +K+ DFG       T+    +H  V+ T  Y +PE   G   +   D++S+G +L E+  
Sbjct: 150 LKIFDFGIAKALSETSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV 207

Query: 281 GE 282
           GE
Sbjct: 208 GE 209

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 43/218 (19%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD----- 149
               +G+G FGQ ++    E  E++ +K +   ++  +   + E+ V++ L  H      
Sbjct: 14  HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKF 72

Query: 150 IG-GTRYRSFPI-----------DLVRELGRQLLESV------------AFMHELRLIHT 185
           IG   + +                +++ +  Q   S             A++H + +IH 
Sbjct: 73  IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132

Query: 186 DLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           DL   N L+   + V V D  F L+R   D        +S          T         
Sbjct: 133 DLNSHNCLVRENKNVVVAD--FGLARLMVDEKTQPEGLRSLKKPDRKKRYT--------- 181

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 282
           VV   ++ APE+I G  ++   D++S G +L E+    
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 51/246 (20%), Positives = 88/246 (35%), Gaps = 84/246 (34%)

Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKY-REAAM 136
              +L+ RY +   +G G   +V    D      VA+K++R+          ++ REA  
Sbjct: 6   TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA-- 63

Query: 137 IEIDVLQRLAR---------HDIGGTRYRSFPI--------------DLVRELGR----- 168
                 Q  A          +D G     + P+              D+V   G      
Sbjct: 64  ------QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117

Query: 169 ------QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 222
                    +++ F H+  +IH D+KP NI++                 S          
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMI-----------------SATN------- 153

Query: 223 KSSAIKLIDFG------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 276
              A+K++DFG       +       + V+ T  Y +PE   G   +   D++S+GC+L 
Sbjct: 154 ---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210

Query: 277 ELCSGE 282
           E+ +GE
Sbjct: 211 EVLTGE 216

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 45/228 (19%), Positives = 79/228 (34%), Gaps = 61/228 (26%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--- 148
           P +R+  K+G G FG++    +    E VAIK+    ++      +E    ++L      
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-QLHLEYRFYKQLGSGDGI 67

Query: 149 -------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                    D+     R+F +  V  +  QL+  + ++H   LI
Sbjct: 68  PQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLI 127

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-------STT 236
           + D+KPEN L+                    G           I +IDF          T
Sbjct: 128 YRDVKPENFLI--------------------GR--PGNKTQQVIHIIDFALAKEYIDPET 165

Query: 237 FEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            +H   ++H  +  T  Y +    LG   +   DL ++G + +    G
Sbjct: 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 62.8 bits (153), Expect = 3e-11
 Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 29/131 (22%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--- 148
            RYR+  K+G G+FG +    D    E VAIK+     K+ +  + E  + + +      
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMMQGGVGI 67

Query: 149 -------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                    D+     R F +  V  L  Q++  + ++H    I
Sbjct: 68  PTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127

Query: 184 HTDLKPENILL 194
           H D+KP+N L+
Sbjct: 128 HRDVKPDNFLM 138

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 62.8 bits (153), Expect = 4e-11
 Identities = 33/187 (17%), Positives = 57/187 (30%), Gaps = 70/187 (37%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA----- 146
            ++ +  K+G G FG +   F   K E  A  +V+   +       E+   QR+A     
Sbjct: 37  NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCI 96

Query: 147 ---------------------RHDIGGTRYR-------------------SFPIDLVREL 166
                                  +  G  YR                   +F    V +L
Sbjct: 97  KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQL 156

Query: 167 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 226
           G ++L+ + ++HE   +H D+K  N+LL                                
Sbjct: 157 GIRMLDVLEYIHENEYVHGDIKAANLLL-------------------------GYKNPDQ 191

Query: 227 IKLIDFG 233
           + L D+G
Sbjct: 192 VYLADYG 198

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 63.5 bits (154), Expect = 4e-11
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 29/131 (22%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--- 148
            ++R+  K+G G+FG++    + +  E VAIK+     K+ +    E  + + L      
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-ESKIYRILQGGTGI 65

Query: 149 -------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                    D+     R   +  V  L  Q++  V F+H    +
Sbjct: 66  PNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 125

Query: 184 HTDLKPENILL 194
           H D+KP+N L+
Sbjct: 126 HRDIKPDNFLM 136

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 44/228 (19%), Positives = 79/228 (34%), Gaps = 61/228 (26%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--- 148
             Y++  ++GEG+FG + E  +    + VAIK     +   +    E    + LA     
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-EYRTYKLLAGCTGI 68

Query: 149 -------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                    D+     R F +  V    +Q+L  V  +HE  L+
Sbjct: 69  PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLV 128

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-------STT 236
           + D+KP+N L+                         N   ++ I ++DFG         T
Sbjct: 129 YRDIKPDNFLI----------------------GRPNSKNANMIYVVDFGMVKFYRDPVT 166

Query: 237 FEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 281
            +H   ++   +  T  Y +    LG   +   DL ++G + +    G
Sbjct: 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 214

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 61.9 bits (151), Expect = 6e-11
 Identities = 47/234 (20%), Positives = 85/234 (36%), Gaps = 64/234 (27%)

Query: 95  RILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD- 149
            +  ++G G+FG V +  +  +    VA+K++       +  +A   E+ VL++  RH  
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVN 81

Query: 150 --------------------IGGTRYR-------SFPIDLVRELGRQLLESVAFMHELRL 182
                                G + Y         F +  + ++ RQ    + ++H   +
Sbjct: 82  ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141

Query: 183 IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           IH DLK  NI L     VK+ D  F L+                        S       
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGD--FGLAT---------------------EKSRWSGSHQ 178

Query: 242 HSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLE 292
              +  +  + APEVI     N   +  D+++ G +L EL +G+  +    N +
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 61.6 bits (150), Expect = 8e-11
 Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 72/244 (29%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD--- 149
           I  K+G G+FG V     +     VA+KI+   +   +     + E+ +++RL RH    
Sbjct: 41  IKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIV 97

Query: 150 -------------------IGGTRYR---------SFPIDLVRELGRQLLESVAFMHELR 181
                                G+ YR                  +   + + + ++H   
Sbjct: 98  LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157

Query: 182 --LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             ++H +LK  N+L+     VKV                            DFG +  + 
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKV---------------------------CDFGLSRLKA 190

Query: 240 QDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
                  S   T  + APEV+     N   D++S G IL EL + +  +    NL    +
Sbjct: 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQV 247

Query: 297 MERV 300
           +  V
Sbjct: 248 VAAV 251

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 59.0 bits (143), Expect = 7e-10
 Identities = 24/190 (12%), Positives = 58/190 (30%), Gaps = 73/190 (38%)

Query: 92  PRYRILSKMGEGTFGQV--------VECFDNEKKELVAIKI-------VRSINKY-REAA 135
            ++++ S       G +        + C    +K+  ++K+           N + R A 
Sbjct: 42  RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAK 101

Query: 136 MIEIDVLQRLARHDIGG-----------TRYR---------------------SFPIDLV 163
            ++++  ++L    +              +YR                           V
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSV 161

Query: 164 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 223
            ++  +LL+++ F+HE   +H ++  ENI +                         +   
Sbjct: 162 LQVACRLLDALEFLHENEYVHGNVTAENIFV-------------------------DPED 196

Query: 224 SSAIKLIDFG 233
            S + L  +G
Sbjct: 197 QSQVTLAGYG 206

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 59.0 bits (143), Expect = 7e-10
 Identities = 37/205 (18%), Positives = 62/205 (30%), Gaps = 83/205 (40%)

Query: 84  FAIGENLT----PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSINKYREA 134
           FA+GE +T      +++   +G+G FG +     N            +K+  S N     
Sbjct: 23  FAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLF- 81

Query: 135 AMIEIDVLQRLA--------------------------RHDIGGTRY------------- 155
              E+   QR A                           HD  G  Y             
Sbjct: 82  --TELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQ 139

Query: 156 -------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 208
                  + F    V +L  ++L+ + ++HE   +H D+K  N+LL              
Sbjct: 140 KIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL-------------- 185

Query: 209 SRSSKDGSYFKNLPKSSAIKLIDFG 233
                      N      + L+D+G
Sbjct: 186 -----------NYKNPDQVYLVDYG 199

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 53/301 (17%), Positives = 97/301 (32%), Gaps = 85/301 (28%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-----I 150
           +L  +G+G +G+V     + + E VA+KI  S ++       E+     L RH+     I
Sbjct: 12  LLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML-RHENILGFI 68

Query: 151 G---------------------GT-----RYRSFPIDLVRELGRQLLESVAFMHELRL-- 182
                                 G+     +  +        +   +   +A +H      
Sbjct: 69  ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128

Query: 183 ------IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGST 235
                  H DLK +NIL+       + D    L+              S +   +D G+ 
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIAD--LGLAVM-----------HSQSTNQLDVGNN 175

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVELCSGEALFQTHE 289
                     V T+ Y APEV+               D+W+ G +L E+          E
Sbjct: 176 P--------RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 227

Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATSRDSMRAVWKLL 345
           + +            P + V+  D   E           R + P+   S  ++ ++ KL+
Sbjct: 228 DYK-----------PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLM 276

Query: 346 R 346
           +
Sbjct: 277 K 277

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 44/247 (17%), Positives = 83/247 (33%), Gaps = 69/247 (27%)

Query: 96  ILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD-- 149
           I   +G+G FGQV    +  E    VAI+++          +A   E+   ++  RH+  
Sbjct: 37  IGELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENV 91

Query: 150 --------------------IGGTRYR-------SFPIDLVRELGRQLLESVAFMHELRL 182
                                G T Y           ++  R++ +++++ + ++H   +
Sbjct: 92  VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI 151

Query: 183 IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +H DLK +N+       V + D  F L   S      +                      
Sbjct: 152 LHKDLKSKNV-FYDNGKVVITD--FGLFSISGVLQAGRR------------------EDK 190

Query: 242 HSYVVSTRHYRAPEVILGLGWNYP---------CDLWSVGCILVELCSGEALFQTHENLE 292
                    + APE+I  L  +            D++++G I  EL + E  F+T     
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA 250

Query: 293 HLAMMER 299
            +  M  
Sbjct: 251 IIWQMGT 257

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 56.3 bits (136), Expect = 5e-09
 Identities = 56/301 (18%), Positives = 104/301 (34%), Gaps = 85/301 (28%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-----I 150
           +   +G+G FG+V       + E VA+KI  S  +       EI     L RH+     I
Sbjct: 46  LQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFI 102

Query: 151 GG--------------TRY------------RSFPIDLVRELGRQLLESVAFMHELRL-- 182
                           + Y             +  ++ + +L       +A +H   +  
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162

Query: 183 ------IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGST 235
                  H DLK +NIL+       + D    L+               SA   ID    
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIAD--LGLAVR-----------HDSATDTIDIAPN 209

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVELCSGEALFQTHE 289
                     V T+ Y APEV+               D++++G +  E+    ++   HE
Sbjct: 210 H--------RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261

Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATSRDSMRAVWKLL 345
           + +           LP++ ++ +D   E+       +  R + P+   S +++R + K++
Sbjct: 262 DYQ-----------LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 310

Query: 346 R 346
           R
Sbjct: 311 R 311

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 56.3 bits (136), Expect = 7e-09
 Identities = 46/237 (19%), Positives = 86/237 (36%), Gaps = 57/237 (24%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----I 150
            +  K+G G +G+V E    +    VA+K ++      E  + E  V++ + +H     +
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 281

Query: 151 GGTRYRSFPIDLVREL-------------GRQLLESV-------------AFMHELRLIH 184
            G   R  P  ++ E               RQ + +V              ++ +   IH
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341

Query: 185 TDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
            +L   N L+     VKV D  F LSR     +Y  +      IK               
Sbjct: 342 RNLAARNCLVGENHLVKVAD--FGLSRLMTGDTYTAHAGAKFPIKWT------------- 386

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                    APE +    ++   D+W+ G +L E+ + G + +   +  +   ++E+
Sbjct: 387 ---------APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 434

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 55.5 bits (134), Expect = 9e-09
 Identities = 54/302 (17%), Positives = 98/302 (32%), Gaps = 87/302 (28%)

Query: 96  ILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++ ++G+G +G+V    +  EK   VA+K+  +  +       EI     + RH+     
Sbjct: 41  MVKQIGKGRYGEVWMGKWRGEK---VAVKVFFTTEEASWFRETEIYQTVLM-RHENILGF 96

Query: 150 IG---------------------GTRYR-----SFPIDLVRELGRQLLESVAFMHELRL- 182
           I                      G+ Y      +     + +L    +  +  +H     
Sbjct: 97  IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156

Query: 183 -------IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGS 234
                   H DLK +NIL+       + D    L+               S    +D   
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIAD--LGLAVK-----------FISDTNEVDIPP 203

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVELCSGEALFQTH 288
            T         V T+ Y  PEV+               D++S G IL E+          
Sbjct: 204 NT--------RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATSRDSMRAVWKL 344
           E  +           LP+H ++ +D   E        +  R  +P+  +S + +R + KL
Sbjct: 256 EEYQ-----------LPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKL 304

Query: 345 LR 346
           + 
Sbjct: 305 MT 306

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 57/293 (19%), Positives = 96/293 (32%), Gaps = 79/293 (26%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71

Query: 150 -----IG-GTRYRSFPIDLVREL-------------------------GRQLLESVAFMH 178
                 G         + L+ E                            Q+ + + ++ 
Sbjct: 72  NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
             R IH DL   NIL+ +   VK+                            DFG T   
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIG---------------------------DFGLTKVL 164

Query: 239 HQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
            QD  +              APE +    ++   D+WS G +L EL +     ++     
Sbjct: 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWK 343
              +     G +    +I       +  +   RL  PDG        M   W 
Sbjct: 225 MRMIGNDKQGQMIVFHLI-------ELLKNNGRLPRPDGCPDEIYMIMTECWN 270

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 58/293 (19%), Positives = 96/293 (32%), Gaps = 79/293 (26%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L +HD
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 102

Query: 150 -----IG-GTRYRSFPIDLVREL-------------------------GRQLLESVAFMH 178
                 G         + L+ E                            Q+ + + ++ 
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
             R IH DL   NIL+ +   VK+                            DFG T   
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIG---------------------------DFGLTKVL 195

Query: 239 HQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
            QD  Y              APE +    ++   D+WS G +L EL +     ++     
Sbjct: 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 255

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWK 343
              +     G +    +I       +  +   RL  PDG        M   W 
Sbjct: 256 MRMIGNDKQGQMIVFHLI-------ELLKNNGRLPRPDGCPDEIYMIMTECWN 301

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 57/307 (18%), Positives = 100/307 (32%), Gaps = 87/307 (28%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD- 149
           +   ++L     G FG V +       E VA+KI    +K       E+  L  + +H+ 
Sbjct: 23  SMPLQLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHEN 79

Query: 150 ----IG-GTRYRSFPID--LVRE----------LGRQLL---------ESVA----FMHE 179
               IG   R  S  +D  L+            L   ++         E++A    ++HE
Sbjct: 80  ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHE 139

Query: 180 ----------LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 229
                       + H D+K +N+LL                   + +            +
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLL-----------------KNNLT----------ACI 172

Query: 230 IDFGSTTFEHQDHSYVVS-----TRHYRAPEVILG-LGWNYP----CDLWSVGCILVELC 279
            DFG         S   +     TR Y APEV+ G + +        D++++G +L EL 
Sbjct: 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232

Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           S           E++   E  +G  P    ++     E    +  R    D       M 
Sbjct: 233 SRCTAA-DGPVDEYMLPFEEEIGQHPSLEDMQ-----EVVVHKKKRPVLRDYWQKHAGMA 286

Query: 340 AVWKLLR 346
            + + + 
Sbjct: 287 MLCETIE 293

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 49.5 bits (119), Expect = 6e-07
 Identities = 32/247 (12%), Positives = 75/247 (30%), Gaps = 79/247 (31%)

Query: 96  ILSKMGEGTFGQVVE--CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD- 149
            L+K+ E   G++ +     N+    + +K+++  +   +       E   L+    H  
Sbjct: 14  FLTKLNENHSGELWKGRWQGND----IVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPN 68

Query: 150 -----------------------IGGTRYR------SFPIDLVRELG--RQLLESVAFMH 178
                                    G+ Y       +F +D  + +     +   +AF+H
Sbjct: 69  VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128

Query: 179 ELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
            L   +    L   ++++                  +D +           ++       
Sbjct: 129 TLEPLIPRHALNSRSVMI-----------------DEDMT----------ARISMADVKF 161

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYP---CDLWSVGCILVELCSGEALFQTHENLEH 293
                    +    + APE +     +      D+WS   +L EL + E  F    +L +
Sbjct: 162 SFQSPG--RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF---ADLSN 216

Query: 294 LAMMERV 300
           + +  +V
Sbjct: 217 MEIGMKV 223

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 57/237 (24%), Positives = 87/237 (36%), Gaps = 59/237 (24%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 244

Query: 150 ----------------IGG-------TRYRSF--PIDLVRELGRQLLESVAFMHELRLIH 184
                             G            +     LV ++  Q+   +A++  +  +H
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 303

Query: 185 TDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
            DL+  NIL+      KV D  F L+R  +D  Y         IK               
Sbjct: 304 RDLRAANILVGENLVCKVAD--FGLARLIEDNEYTARQGAKFPIKWT------------- 348

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                    APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 349 ---------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 49.4 bits (118), Expect = 7e-07
 Identities = 38/280 (13%), Positives = 56/280 (20%), Gaps = 108/280 (38%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV 125
             + +PP       G  +         RYR+L   G     Q  +  D      VA+  V
Sbjct: 11  RESSAPPDDVQLVPGARI------ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFV 64

Query: 126 RSINK---------YREAAMIEIDVLQRLAR---------HDIGGTRYRSFPIDLVREL- 166
                                      RL+R          D+  TR       +V E  
Sbjct: 65  DPQGVLPDDVLQETLSRT--------LRLSRIDKPGVARVLDVVHTRAGGL---VVAEWI 113

Query: 167 ---------------------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 205
                                 + L  +    H   +  +   P  + +           
Sbjct: 114 RGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV----------- 162

Query: 206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP 265
                 S DG           + L                                 N  
Sbjct: 163 ------SIDG----------DVVLAYPA-----------------TMPDA-------NPQ 182

Query: 266 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP 305
            D+  +G  L  L               LA  ER     P
Sbjct: 183 DDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 59/276 (21%), Positives = 102/276 (36%), Gaps = 73/276 (26%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARH 148
           + +  +GEG FG+V        ++   E+VA+K +++    ++R     EID+L+ L  H
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YH 92

Query: 149 D-----IG-GTRYRSFPIDLVREL-----------------------GRQLLESVAFMHE 179
           +      G      +  + LV E                         +Q+ E +A++H 
Sbjct: 93  EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 152

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGS--YFKNLPKSSAIKLIDFGSTT 236
              IH DL   N+LL +   VK+ D  F L+++  +G   Y       S +         
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGD--FGLAKAVPEGHEYYRVREDGDSPVF-------- 202

Query: 237 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 295
                         + APE +    + Y  D+WS G  L EL +  ++          L 
Sbjct: 203 --------------WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 331
            + +  G +    +        +   RG RL  PD 
Sbjct: 249 GIAQ--GQMTVLRLT-------ELLERGERLPRPDK 275

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 55/295 (18%), Positives = 92/295 (31%), Gaps = 83/295 (28%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + +  +GEG FG+V  C      +   E VA+K ++  S   +      EI++L+ L  H
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YH 82

Query: 149 D-----IG-GTRYRSFPIDLVREL-------------------------GRQLLESVAFM 177
           +      G  T      I L+ E                            Q+ + + ++
Sbjct: 83  ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
              + +H DL   N+L+ S   VK+                            DFG T  
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIG---------------------------DFGLTKA 175

Query: 238 EHQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN 290
              D  Y              APE ++   +    D+WS G  L EL +  ++       
Sbjct: 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235

Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWK 343
              +       G +    ++          + G RL  P          MR  W+
Sbjct: 236 FLKMIGPTH--GQMTVTRLV-------NTLKEGKRLPCPPNCPDEVYQLMRKCWE 281

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 57/237 (24%), Positives = 87/237 (36%), Gaps = 59/237 (24%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+     
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQL 327

Query: 150 ----------------IGG-------TRYRSF--PIDLVRELGRQLLESVAFMHELRLIH 184
                             G            +     LV ++  Q+   +A++  +  +H
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 386

Query: 185 TDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
            DL+  NIL+      KV D  F L+R  +D  Y         IK               
Sbjct: 387 RDLRAANILVGENLVCKVAD--FGLARLIEDNEYTARQGAKFPIKWT------------- 431

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
                    APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 432 ---------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 43/251 (17%), Positives = 74/251 (29%), Gaps = 71/251 (28%)

Query: 96  ILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           +L  +G G +G V +   D      VA+K+    N+        I  +  +  HD     
Sbjct: 17  LLELIGRGRYGAVYKGSLDERP---VAVKVFSFANRQNFINEKNIYRVPLM-EHDNIARF 72

Query: 150 IGGTRYRSFPID--------------LVRELGRQLLES-------------VAFMHE--- 179
           I G    +                  L + L     +              +A++H    
Sbjct: 73  IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELP 132

Query: 180 ------LRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDF 232
                   + H DL   N+L+ +     + D  F LS         +   + +A      
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISD--FGLSMRLTGNRLVRPGEEDNA------ 184

Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGL-------GWNYPCDLWSVGCILVELCSGEALF 285
                        V T  Y APEV+ G              D++++G I  E+       
Sbjct: 185 ---------AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235

Query: 286 QTHENLEHLAM 296
              E++    M
Sbjct: 236 FPGESVPEYQM 246

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 57/294 (19%), Positives = 94/294 (31%), Gaps = 82/294 (27%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD 149
           + +S++G+G FG V  C      +    LVA+K ++     ++     EI +L+ L   D
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 84

Query: 150 -----IG-GTRYRSFPIDLVREL-------------------------GRQLLESVAFMH 178
                 G         + LV E                            Q+ + + ++ 
Sbjct: 85  FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 144

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
             R +H DL   NIL+ S  +VK+                            DFG     
Sbjct: 145 SRRCVHRDLAARNILVESEAHVKIA---------------------------DFGLAKLL 177

Query: 239 HQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 291
             D  Y V     +      APE +    ++   D+WS G +L EL +  +         
Sbjct: 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA-- 235

Query: 292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWK 343
           E L MM           ++       +    G RL  P    +   + M+  W 
Sbjct: 236 EFLRMMGCERDVPALSRLL-------ELLEEGQRLPAPPACPAEVHELMKLCWA 282

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 6e-06
 Identities = 60/493 (12%), Positives = 128/493 (25%), Gaps = 159/493 (32%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPP------PKVLP---ALYCVQE------FGNGG--- 51
           P         +R RL ++                L    AL  ++        G  G   
Sbjct: 105 PSMMTRMYIEQRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 52  --MPNYACSS-----MFYGAIPRTGSPPW-------RPDDKDGHYVFAIGENL----TPR 93
             +    C S          I       W        P+      V  + + L     P 
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF------WLNLKNCNSPET-----VLEMLQKLLYQIDPN 212

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH----D 149
           +   S          +     E + L+  K       Y    ++ ++V  + A+     +
Sbjct: 213 WTSRSDHSSNIK-LRIHSIQAELRRLLKSK------PYENCLLVLLNV--QNAKAWNAFN 263

Query: 150 IG-----GTRYRSFPIDLVRELGRQLLESV----AFMHE---------LRLIHTDLKPE- 190
           +       TR++    D +       +           +         L     DL  E 
Sbjct: 264 LSCKILLTTRFKQV-TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322

Query: 191 ---NILLVS--AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 245
              N   +S  AE ++      L+        +K++       +I+   ++    + +  
Sbjct: 323 LTTNPRRLSIIAESIR----DGLATWD----NWKHVNCDKLTTIIE---SSLNVLEPAEY 371

Query: 246 VSTRHYRA----------PEVILGLGWNYPCDLWSVGCILVELCSGEAL----------- 284
              + +            P ++L L W        V  ++ +L     +           
Sbjct: 372 --RKMFDRLSVFPPSAHIPTILLSLIWFDV-IKSDVMVVVNKLHKYSLVEKQPKESTISI 428

Query: 285 ----FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG--------- 331
                +    LE+   +        H  ++      + +        + D          
Sbjct: 429 PSIYLELKVKLENEYAL--------HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480

Query: 332 --ATSRDSMRAVWKLLRLPNL--IMQHVDHS------AGDLIDLLQGLLRYDPAERLKAR 381
                      +++++ L +   + Q + H       +G +++ LQ L  Y      K  
Sbjct: 481 LKNIEHPERMTLFRMVFL-DFRFLEQKIRHDSTAWNASGSILNTLQQLKFY------KPY 533

Query: 382 EALRHPFFTRDVR 394
                P + R V 
Sbjct: 534 ICDNDPKYERLVN 546

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 51/241 (21%), Positives = 86/241 (35%), Gaps = 62/241 (25%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            +   +GEG FG V +            VAIK  +  + +  RE  + E   +++   H 
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 451

Query: 150 -----IG------------------------GTRYRSFPIDLVRELGRQLLESVAFMHEL 180
                IG                          ++      L+     QL  ++A++   
Sbjct: 452 HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAYLESK 510

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
           R +H D+   N+L+ S + VK+ D  F LSR  +D +Y+K       IK +         
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGD--FGLSRYMEDSTYYKASKGKLPIKWM--------- 559

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME 298
                        APE I    +    D+W  G  + E+   G   FQ  +N + +  +E
Sbjct: 560 -------------APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 606

Query: 299 R 299
            
Sbjct: 607 N 607

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 34/156 (21%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----I 150
            +  K+G G +G+V E    +    VA+K ++      E  + E  V++ + +H     +
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 74

Query: 151 GGTRYRSFPIDLV-------------RELGRQLLESV-------------AFMHELRLIH 184
            G   R  P  ++             RE  RQ + +V              ++ +   IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134

Query: 185 TDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFK 219
            DL   N L+     VKV D  F LSR     +Y  
Sbjct: 135 RDLAARNCLVGENHLVKVAD--FGLSRLMTGDTYTA 168

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 41/187 (21%), Positives = 65/187 (34%), Gaps = 41/187 (21%)

Query: 63  GAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAI 122
               ++G    R   KD   +    E+L     +  ++G G FG+V          LVA+
Sbjct: 91  PLTKKSGVVLHRAVPKDKWVLNH--EDLV----LGEQIGRGNFGEVFSGRLRADNTLVAV 144

Query: 123 KIVR--SINKYREAAMIEIDVLQRLARHD----IGGTRYRSFPIDLVREL---------- 166
           K  R       +   + E  +L++   H     + G   +  PI +V EL          
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203

Query: 167 ---GRQLLESV------------AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSR 210
              G +L                 ++     IH DL   N L+     +K+ D  F +SR
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISD--FGMSR 261

Query: 211 SSKDGSY 217
              DG Y
Sbjct: 262 EEADGVY 268

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 43.3 bits (101), Expect = 8e-05
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 11/112 (9%)

Query: 160 IDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 218
           +   + +  QL  S+A     LR  H DL   N+LL      K+  Y    +SS   S  
Sbjct: 160 LATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKL-HYTLNGKSSTIPSC- 217

Query: 219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWS 270
                   + +ID+  +  E                ++  G G +Y  D++ 
Sbjct: 218 -----GLQVSIIDYTLSRLERDGIVVFCDV--SMDEDLFTGDG-DYQFDIYR 261

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.0 bits (95), Expect = 5e-04
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 11/67 (16%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---------SINKYREAAMIEIDV 141
           T + +   K+GEG FG+V +         VAIKI+          S  K  E  + EI +
Sbjct: 19  TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 142 LQRLARH 148
            + L+  
Sbjct: 77  SKELSLL 83

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 43.5 bits (103), Expect = 9e-05
 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 34/153 (22%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++  K+G G FG+V     N+  + VA+K ++  +   EA + E +V++ L +HD     
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKL 248

Query: 150 IG------------------------GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
                                            P+  + +   Q+ E +AF+ +   IH 
Sbjct: 249 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308

Query: 186 DLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 217
           DL+  NIL+ ++   K+ D  F L+R  +D  Y
Sbjct: 309 DLRAANILVSASLVCKIAD--FGLARVIEDNEY 339

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 53/246 (21%), Positives = 87/246 (35%), Gaps = 72/246 (29%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            +   +GEG FG V +            VAIK  +  + +  RE  + E   +++   H 
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 76

Query: 150 -----IG------------------------GTRYRSFPIDLVRELGRQLLESVAFMHEL 180
                IG                          +Y      L+     QL  ++A++   
Sbjct: 77  HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLESK 135

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
           R +H D+   N+L+ S + VK+ D  F LSR  +D +Y+K       IK +         
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGD--FGLSRYMEDSTYYKASKGKLPIKWM--------- 184

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNY-----PCDLWSVGCILVELCS-GEALFQTHENLEH 293
                        APE I     N+       D+W  G  + E+   G   FQ  +N + 
Sbjct: 185 -------------APESI-----NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 226

Query: 294 LAMMER 299
           +  +E 
Sbjct: 227 IGRIEN 232

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 43/247 (17%), Positives = 73/247 (29%), Gaps = 45/247 (18%)

Query: 14  MDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPW 73
           M        R    V   +  P+  P L  +          Y  +           +   
Sbjct: 7   MGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHI 66

Query: 74  RPDDKDGHYVFAIGENLTPRYR----ILSKMGEGTFGQVVECF---DNEKKELVAIKIVR 126
                +   V A+   +             +G G FG V       ++ KK   A+K + 
Sbjct: 67  DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 126

Query: 127 SINKYREAA--MIEIDVLQRLARH-----------DIGGTRY-----------RSF---- 158
            I    E +  + E  +++    H              G+             R+F    
Sbjct: 127 RITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE 185

Query: 159 -----PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSS 212
                  DL+   G Q+ + + F+   + +H DL   N +L     VKV D  F L+R  
Sbjct: 186 THNPTVKDLIG-FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD--FGLARDM 242

Query: 213 KDGSYFK 219
            D  +  
Sbjct: 243 YDKEFDS 249

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 64/335 (19%), Positives = 107/335 (31%), Gaps = 84/335 (25%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPPPKVLPA-LYCVQEFGNGGMPNYACSSMFYGAIPRT 68
                       P     +  P      L +  Y  +              M        
Sbjct: 259 ASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESP 318

Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE-CFDNEKKEL-VAIKIVR 126
            S P    DK    +F   +NL        ++G G FG V +  +   KK++ VAIK+++
Sbjct: 319 FSDPEELKDKK---LFLKRDNLL---IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLK 372

Query: 127 --SINKYREAAMIEIDVLQRLARHD---------------------IGG-------TRYR 156
             +     E  M E  ++ +L  +                       GG        +  
Sbjct: 373 QGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE 431

Query: 157 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 216
             P+  V EL  Q+   + ++ E   +H +L   N+LLV+  Y K+              
Sbjct: 432 EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS------------- 478

Query: 217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNY-----P 265
                         DFG +     D SY  +    +      APE I     N+      
Sbjct: 479 --------------DFGLSKALGADDSYYTARSAGKWPLKWYAPECI-----NFRKFSSR 519

Query: 266 CDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 299
            D+WS G  + E  S G+  ++  +  E +A +E+
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 34/153 (22%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L +H      
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRL 73

Query: 150 IG------------------------GTRYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
                                             I+ + ++  Q+ E +AF+ E   IH 
Sbjct: 74  YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133

Query: 186 DLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 217
           DL+  NIL+      K+ D  F L+R  +D  Y
Sbjct: 134 DLRAANILVSDTLSCKIAD--FGLARLIEDNEY 164

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 48/241 (19%), Positives = 87/241 (36%), Gaps = 67/241 (27%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----I 150
            +L ++G G FG V       + + VA+K+++  +   +    E   + +L  H      
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKF 68

Query: 151 GGTRYRSFPIDLVREL-------------------------GRQLLESVAFMHELRLIHT 185
            G   + +PI +V E                             + E +AF+   + IH 
Sbjct: 69  YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128

Query: 186 DLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
           DL   N L+     VKV D  F ++R   D  Y  ++     +K                
Sbjct: 129 DLAARNCLVDRDLCVKVSD--FGMTRYVLDDQYVSSVGTKFPVK---------------- 170

Query: 245 VVSTRHYRAPEVILGLGWNY-----PCDLWSVGCILVELCS-GEALFQTHENLEHLAMME 298
                 + APEV      +Y       D+W+ G ++ E+ S G+  +  + N E +  + 
Sbjct: 171 ------WSAPEVF-----HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS 219

Query: 299 R 299
           +
Sbjct: 220 Q 220

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 34/153 (22%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----I 150
             + ++G G FG V   +   K + VAIK +R      E  + E +V+ +L  H     +
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQL 68

Query: 151 GGTRYRSFPIDLVREL-------------------------GRQLLESVAFMHELRLIHT 185
            G      PI LV E                             + E +A++ E  +IH 
Sbjct: 69  YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 128

Query: 186 DLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 217
           DL   N L+   + +KV D  F ++R   D  Y
Sbjct: 129 DLAARNCLVGENQVIKVSD--FGMTRFVLDDQY 159

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 38/160 (23%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L  +G+G FG V+       K  VA+K +++ +   +A + E  V+ +L RH      
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQL 251

Query: 150 IGGTRYRSFPIDLVREL-------------GRQLLESV-------------AFMHELRLI 183
           +G        + +V E              GR +L                 ++     +
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311

Query: 184 HTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLP 222
           H DL   N+L+      KV D  F L++ +        LP
Sbjct: 312 HRDLAARNVLVSEDNVAKVSD--FGLTKEASSTQDTGKLP 349

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	405
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.92
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.88
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.87
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.76
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.65
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.71
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.66
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.52
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.45
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.88
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.55
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.37
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.08
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.86
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.79
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.78
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.65
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.65
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.41
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	95.86
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.83
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.56
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	95.38
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	95.37
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	94.93
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	94.02
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.87
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	93.4
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	92.38
3mes_A	424	Choline kinase; malaria, structural genomics, stru	91.01
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.42
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	86.56
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	84.11

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.7e-56  Score=422.95  Aligned_cols=229  Identities=26%  Similarity=0.426  Sum_probs=191.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ..|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+++|+.++|+||+...                
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56999999999999999999999999999999996433 3456678999999999999985432                


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                ...+++.+++.++.||+.||+|||++|||||||||+|||++.+|                          
T Consensus       154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--------------------------  207 (346)
T 4fih_A          154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--------------------------  207 (346)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--------------------------
T ss_pred             CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCC--------------------------
Confidence                      24689999999999999999999999999999999999997655                          


Q ss_pred             CCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 015532          225 SAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL  301 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~  301 (405)
                       .+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+....
T Consensus       208 -~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~  286 (346)
T 4fih_A          208 -RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL  286 (346)
T ss_dssp             -CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS
T ss_pred             -CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC
Confidence             4667777776544322   234789999999999999999999999999999999999999999988877776654421


Q ss_pred             CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHH
Q 015532          302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  381 (405)
Q Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  381 (405)
                      .+.                                               ...+..+++++++||.+||++||++|||++
T Consensus       287 ~~~-----------------------------------------------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~  319 (346)
T 4fih_A          287 PPR-----------------------------------------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAA  319 (346)
T ss_dssp             CCC-----------------------------------------------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             CCC-----------------------------------------------CCccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            110                                               011234578999999999999999999999


Q ss_pred             HHHcCCCCCCCCC
Q 015532          382 EALRHPFFTRDVR  394 (405)
Q Consensus       382 elL~hp~f~~~~~  394 (405)
                      |+|+||||++...
T Consensus       320 e~l~Hp~~~~~~~  332 (346)
T 4fih_A          320 ELLKHPFLAKAGP  332 (346)
T ss_dssp             HHTTCGGGGGCCC
T ss_pred             HHhcCHhhcCCCC
Confidence            9999999997643

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.7e-56  Score=411.29  Aligned_cols=225  Identities=25%  Similarity=0.400  Sum_probs=177.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++++.    ....+.+.+|+++|+.++|+|++...             
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5799999999999999999999999999999999643    23356788999999999999985432             


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++.+++.++.||+.||+|||++||+||||||+|||++.++                       
T Consensus        93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~-----------------------  149 (275)
T 3hyh_A           93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL-----------------------  149 (275)
T ss_dssp             ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC-----------------------
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCC-----------------------
Confidence                         25689999999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          .+||+|||+|+.....  ..+.+||+.|||||++.+..| +.++|||||||++|+|++|++||.+.+..+.+..+.
T Consensus       150 ----~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~  225 (275)
T 3hyh_A          150 ----NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS  225 (275)
T ss_dssp             ----CEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             ----CEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence                4677777777654332  234689999999999998886 589999999999999999999999877766665554


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .....+                                                  +..+++++++||.+||+.||++||
T Consensus       226 ~~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~dP~~R~  255 (275)
T 3hyh_A          226 NGVYTL--------------------------------------------------PKFLSPGAAGLIKRMLIVNPLNRI  255 (275)
T ss_dssp             HTCCCC--------------------------------------------------CTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             cCCCCC--------------------------------------------------CCCCCHHHHHHHHHHccCChhHCc
Confidence            322111                                                  123577899999999999999999


Q ss_pred             CHHHHHcCCCCCCCC
Q 015532          379 KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ta~elL~hp~f~~~~  393 (405)
                      |++|+|+||||+.+.
T Consensus       256 s~~eil~hpw~k~~~  270 (275)
T 3hyh_A          256 SIHEIMQDDWFKVDL  270 (275)
T ss_dssp             CHHHHHHCHHHHTTC
T ss_pred             CHHHHHcCcccccCC
Confidence            999999999998754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.1e-56  Score=413.25  Aligned_cols=225  Identities=27%  Similarity=0.387  Sum_probs=189.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+++.||||++++..    ...+.+.+|+++|+.|+|+||+...             
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45999999999999999999999999999999997532    3346788999999999999985432             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    .+.+++.+++.++.||+.||+|||++|||||||||+|||++.+|                      
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g----------------------  169 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM----------------------  169 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS----------------------
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCC----------------------
Confidence                          24689999999999999999999999999999999999997665                      


Q ss_pred             CCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                           .+||+|||+|+....     ...+.+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus       170 -----~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~  244 (311)
T 4aw0_A          170 -----HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA  244 (311)
T ss_dssp             -----CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             -----CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                 456666666654321     1234689999999999999999999999999999999999999999988877776


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .|.+....+                                                  ++.+++++++||.+||++||+
T Consensus       245 ~i~~~~~~~--------------------------------------------------p~~~s~~~~dli~~lL~~dp~  274 (311)
T 4aw0_A          245 KIIKLEYDF--------------------------------------------------PEKFFPKARDLVEKLLVLDAT  274 (311)
T ss_dssp             HHHHTCCCC--------------------------------------------------CTTCCHHHHHHHHHHSCSSGG
T ss_pred             HHHcCCCCC--------------------------------------------------CcccCHHHHHHHHHHccCCHh
Confidence            665432111                                                  124577899999999999999


Q ss_pred             CCCCHHH------HHcCCCCCCCC
Q 015532          376 ERLKARE------ALRHPFFTRDV  393 (405)
Q Consensus       376 ~Rpta~e------lL~hp~f~~~~  393 (405)
                      +|+|++|      +++||||++-.
T Consensus       275 ~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          275 KRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             GSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             HCcChHHHcCCHHHHCCCCcCCCC
Confidence            9999988      68999998754

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=6e-55  Score=422.59  Aligned_cols=257  Identities=29%  Similarity=0.481  Sum_probs=200.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|+++++||+|+||+||+|+++.+|+.||||+++...   ...+.+++|+++|+.|+|+||+...            
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence            4578999999999999999999999999999999996532   3345678999999999999985421            


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||+|||++|||||||||+|||++.+|.               
T Consensus       132 ~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~---------------  196 (398)
T 4b99_A          132 KSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE---------------  196 (398)
T ss_dssp             CCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC---------------
T ss_pred             CEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCC---------------
Confidence                                245899999999999999999999999999999999999987664               


Q ss_pred             CCcccCCCCCCCceeccCCCCcccc-------CCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEH-------QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                  +||+|||+|+...       ......+||+.|||||++.+. .|+.++||||+||++|||++|++||.
T Consensus       197 ------------~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~  264 (398)
T 4b99_A          197 ------------LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP  264 (398)
T ss_dssp             ------------EEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             ------------EEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCC
Confidence                        4555555554321       122346899999999999886 46899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhh-HHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      +.+..+++..|....|.++........... ..+....     +.               ..+..........+++++||
T Consensus       265 g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~~~~~s~~~~dL  324 (398)
T 4b99_A          265 GKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSL-----PP---------------RQPVPWETVYPGADRQALSL  324 (398)
T ss_dssp             CSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSS-----CC---------------CCCCCHHHHSTTCCHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcC-----CC---------------cCCCCHHHhCCCCCHHHHHH
Confidence            999999999999999988765432211100 0110000     00               00111112234567899999


Q ss_pred             HHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          366 LQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      |.+||++||++|+||+|+|+||||++..
T Consensus       325 l~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          325 LGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             HHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            9999999999999999999999999753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.4e-56  Score=420.24  Aligned_cols=227  Identities=25%  Similarity=0.412  Sum_probs=184.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|+++++||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+++|++|+|+||+...              
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            6899999999999999999999999999999999643   23456788999999999999985422              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++.+++.++.||+.||+|||++|||||||||+|||++.+|                     
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g---------------------  162 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG---------------------  162 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC---------------------
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC---------------------
Confidence                           12468899999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                            .+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+.+
T Consensus       163 ------~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~  236 (350)
T 4b9d_A          163 ------TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK  236 (350)
T ss_dssp             ------CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ------CEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH
Confidence                  4677777777654432   1346899999999999999999999999999999999999999999888777766


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+..  .|                                               .....+++++.+||.+||+.||++
T Consensus       237 i~~~~--~~-----------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~  267 (350)
T 4b9d_A          237 IISGS--FP-----------------------------------------------PVSLHYSYDLRSLVSQLFKRNPRD  267 (350)
T ss_dssp             HHHTC--CC-----------------------------------------------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHcCC--CC-----------------------------------------------CCCccCCHHHHHHHHHHccCChhH
Confidence            64421  11                                               011345778999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVR  394 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~  394 (405)
                      |||++|+|+||||++...
T Consensus       268 R~s~~e~l~hp~~~~~~~  285 (350)
T 4b9d_A          268 RPSVNSILEKGFIAKRIE  285 (350)
T ss_dssp             SCCHHHHHTSHHHHTTGG
T ss_pred             CcCHHHHhcCHHhhcCCC
Confidence            999999999999987543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.2e-55  Score=424.24  Aligned_cols=230  Identities=26%  Similarity=0.424  Sum_probs=192.4

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ...|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+|+.++|+||+...               
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            357999999999999999999999999999999996533 3456688999999999999986532               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++.+++.++.||+.||+|||++|||||||||+||||+.+|                         
T Consensus       230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g-------------------------  284 (423)
T 4fie_A          230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-------------------------  284 (423)
T ss_dssp             CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC-------------------------
T ss_pred             CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-------------------------
Confidence                       24689999999999999999999999999999999999997665                         


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                        .+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+...
T Consensus       285 --~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~  362 (423)
T 4fie_A          285 --RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN  362 (423)
T ss_dssp             --CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             --CEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC
Confidence              4666777766544322   24578999999999999999999999999999999999999999998887777665442


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      ..+.                                               ...+..+++++++||.+||+.||++|+||
T Consensus       363 ~~~~-----------------------------------------------~~~~~~~s~~~~dli~~~L~~dP~~R~ta  395 (423)
T 4fie_A          363 LPPR-----------------------------------------------LKNLHKVSPSLKGFLDRLLVRDPAQRATA  395 (423)
T ss_dssp             CCCC-----------------------------------------------CSCTTSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCC-----------------------------------------------CcccccCCHHHHHHHHHHcCCChhHCcCH
Confidence            1110                                               11223567899999999999999999999


Q ss_pred             HHHHcCCCCCCCCC
Q 015532          381 REALRHPFFTRDVR  394 (405)
Q Consensus       381 ~elL~hp~f~~~~~  394 (405)
                      +|+|+||||++...
T Consensus       396 ~ell~Hp~~~~~~~  409 (423)
T 4fie_A          396 AELLKHPFLAKAGP  409 (423)
T ss_dssp             HHHTTCGGGGGCCC
T ss_pred             HHHhcCHHhcCCCC
Confidence            99999999997643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.3e-54  Score=399.39  Aligned_cols=230  Identities=23%  Similarity=0.409  Sum_probs=181.7

Q ss_pred             ccCCCe-EEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           89 NLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y-~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ...++| ++.++||+|+||+||+|+++.+++.||||++...   ....+.+.+|+++|++|+|+||+...          
T Consensus        22 ~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~  101 (290)
T 3fpq_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK  101 (290)
T ss_dssp             CTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTE
T ss_pred             CCCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCC
Confidence            344566 7788999999999999999999999999999643   23456788999999999999986421          


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                           ...+++..++.++.||+.||+|||++|  ||||||||+|||++.               
T Consensus       102 ~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~---------------  166 (290)
T 3fpq_A          102 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG---------------  166 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS---------------
T ss_pred             cEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC---------------
Confidence                                 245789999999999999999999998  999999999999963               


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                 .++.+||+|||+|+..... ....+||+.|||||++.+ .|+.++|||||||++|||+||++||.+..+
T Consensus       167 -----------~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~  234 (290)
T 3fpq_A          167 -----------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN  234 (290)
T ss_dssp             -----------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred             -----------CCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence                       1235677777777654333 234689999999999875 699999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      ...+...... +..|.                                              ......++++.+||.+||
T Consensus       235 ~~~~~~~i~~-~~~~~----------------------------------------------~~~~~~~~~~~~li~~~L  267 (290)
T 3fpq_A          235 AAQIYRRVTS-GVKPA----------------------------------------------SFDKVAIPEVKEIIEGCI  267 (290)
T ss_dssp             HHHHHHHHTT-TCCCG----------------------------------------------GGGGCCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHc-CCCCC----------------------------------------------CCCccCCHHHHHHHHHHc
Confidence            4443222110 11111                                              111234678999999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +.||++|||++|+|+||||++.
T Consensus       268 ~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          268 RQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             CSSGGGSCCHHHHHTSGGGC--
T ss_pred             cCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1e-54  Score=404.83  Aligned_cols=224  Identities=29%  Similarity=0.429  Sum_probs=179.1

Q ss_pred             CCeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ++|++++.||+|+||+||+|++.   .+++.||||++++..   .....+.+|+++|++++|+||+...           
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46999999999999999999984   467899999996432   2334577899999999999984321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++.+++.++.||+.||+|||++|||||||||+|||++.+|.                   
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-------------------  164 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-------------------  164 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSC-------------------
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCC-------------------
Confidence                            246899999999999999999999999999999999999987665                   


Q ss_pred             cCCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              +||+|||+|+...   ....+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+.
T Consensus       165 --------vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~  236 (304)
T 3ubd_A          165 --------IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT  236 (304)
T ss_dssp             --------EEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --------EEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHH
Confidence                    5555555554322   12234689999999999999999999999999999999999999999988877777


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.+....+                                                  +..+++++++||.+||+.||+
T Consensus       237 ~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~dP~  266 (304)
T 3ubd_A          237 MILKAKLGM--------------------------------------------------PQFLSPEAQSLLRMLFKRNPA  266 (304)
T ss_dssp             HHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCCC--------------------------------------------------CCcCCHHHHHHHHHHcccCHH
Confidence            665432211                                                  123577899999999999999


Q ss_pred             CCCC-----HHHHHcCCCCCCC
Q 015532          376 ERLK-----AREALRHPFFTRD  392 (405)
Q Consensus       376 ~Rpt-----a~elL~hp~f~~~  392 (405)
                      +|||     ++|+++||||++-
T Consensus       267 ~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          267 NRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             GSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HCCCCCcCCHHHHHcCccccCC
Confidence            9998     5899999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.6e-52  Score=399.81  Aligned_cols=285  Identities=24%  Similarity=0.367  Sum_probs=197.9

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~----------  154 (405)
                      .+.++|++.++||+|+||+||+|+++   .+++.||||++.... ....+.+|+++|+.+ .|++++...          
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            45678999999999999999999875   467899999986543 345678899999998 577775432          


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc-cccccCCccccccCCCCCCccc
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~-~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                    ...+++.+++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||++......     
T Consensus        97 lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~-----  171 (361)
T 4f9c_A           97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT-----  171 (361)
T ss_dssp             EEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC-----
T ss_pred             EEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc-----
Confidence                          2468999999999999999999999999999999999999876 78888888887644322     


Q ss_pred             CCCCCCCceeccCCCCccc---------------cCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCC
Q 015532          220 NLPKSSAIKLIDFGSTTFE---------------HQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~  283 (405)
                            ...+.+|+.+...               .......+||+.|||||++.+. .|+.++||||+||++|||++|+.
T Consensus       172 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~  245 (361)
T 4f9c_A          172 ------KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY  245 (361)
T ss_dssp             ------SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             ------cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence                  2233343322111               1112335899999999999886 48999999999999999999999


Q ss_pred             CCC-CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHH----------Hhccchhhhh
Q 015532          284 LFQ-THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW----------KLLRLPNLIM  352 (405)
Q Consensus       284 pf~-~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  352 (405)
                      ||. +.++.+++..|.+++|+.+..........   ....  ....+... .......+.          ..........
T Consensus       246 Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~---~~~~--~~~~p~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  319 (361)
T 4f9c_A          246 PFYKASDDLTALAQIMTIRGSRETIQAAKTFGK---SILC--SKEVPAQD-LRKLCERLRGMDSSTPKLTSDIQGHATNL  319 (361)
T ss_dssp             SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTE---EEEE--SSCCCCCC-HHHHHHHHC--------------------
T ss_pred             CCCCCCCHHHHHHHHHHhcCCccchhhhhhccc---cccc--cccCcchh-hhHHHHhhccccccccccccccccccccc
Confidence            984 56677889999998886443222111000   0000  00011000 000000000          0000011112


Q ss_pred             hcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       353 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      ..+...+++++|||.+||++||++|+||+|+|+||||++
T Consensus       320 ~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          320 EGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             --CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            334567889999999999999999999999999999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=6.7e-53  Score=397.27  Aligned_cols=224  Identities=25%  Similarity=0.307  Sum_probs=181.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      +.|++.++||+|+||+||+|+++.+|+.||||+++....    ..+|+.+|+.|+|+||+...                 
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~  133 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE  133 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            569999999999999999999999999999999975432    24699999999999985432                 


Q ss_pred             ----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          155 ----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       155 ----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                                .+.+++.+++.++.||+.||+|||++|||||||||+|||++.+|.                         
T Consensus       134 gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-------------------------  188 (336)
T 4g3f_A          134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-------------------------  188 (336)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSC-------------------------
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCC-------------------------
Confidence                      246899999999999999999999999999999999999976541                         


Q ss_pred             CCceeccCCCCccccCC--------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          225 SAIKLIDFGSTTFEHQD--------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                       .+||+|||+|+.....        ...++||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+..
T Consensus       189 -~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~  267 (336)
T 4g3f_A          189 -RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK  267 (336)
T ss_dssp             -CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHH
T ss_pred             -EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH
Confidence             3677777776543321        1235799999999999999999999999999999999999999988765554444


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +...  +.                                             .....+..+++.+.+||.+||+.||++
T Consensus       268 i~~~--~~---------------------------------------------~~~~~~~~~s~~~~~li~~~L~~dP~~  300 (336)
T 4g3f_A          268 IASE--PP---------------------------------------------PIREIPPSCAPLTAQAIQEGLRKEPVH  300 (336)
T ss_dssp             HHHS--CC---------------------------------------------GGGGSCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHcC--CC---------------------------------------------CchhcCccCCHHHHHHHHHHccCCHhH
Confidence            4321  10                                             011223456789999999999999999


Q ss_pred             CCCHHHH-------------HcCCCCCCC
Q 015532          377 RLKAREA-------------LRHPFFTRD  392 (405)
Q Consensus       377 Rpta~el-------------L~hp~f~~~  392 (405)
                      |||+.|+             |+|||+.+.
T Consensus       301 R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          301 RASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             SCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             CcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            9999998             579999764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.1e-50  Score=376.77  Aligned_cols=238  Identities=26%  Similarity=0.337  Sum_probs=167.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.|++++.||+|+||+||+|+++.+++.||||+++..  ....+.+.+|+++|++|+|+||+...               
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            3599999999999999999999999999999999643  33456788999999999999985421               


Q ss_pred             ---------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          155 ---------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       155 ---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                                                 ....++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl  164 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL  164 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence                                       01234456889999999999999999999999999999998877666666665


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                      ++....+.....        ....    ..........+||+.|||||++.+..|+.++|||||||++|||++   ||.+
T Consensus       165 a~~~~~~~~~~~--------~~~~----~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~  229 (299)
T 4g31_A          165 VTAMDQDEEEQT--------VLTP----MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST  229 (299)
T ss_dssp             C--------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             ceecCCCccccc--------cccc----cccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence            543322110000        0000    000011233589999999999999999999999999999999996   7754


Q ss_pred             CChHHHHHHHHHH-hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          288 HENLEHLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       288 ~~~~~~~~~i~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      .  .+....+... .+..|+.+                                               ...++.+.+||
T Consensus       230 ~--~~~~~~~~~~~~~~~p~~~-----------------------------------------------~~~~~~~~~li  260 (299)
T 4g31_A          230 Q--MERVRTLTDVRNLKFPPLF-----------------------------------------------TQKYPCEYVMV  260 (299)
T ss_dssp             H--HHHHHHHHHHHTTCCCHHH-----------------------------------------------HHHCHHHHHHH
T ss_pred             c--cHHHHHHHHHhcCCCCCCC-----------------------------------------------cccCHHHHHHH
Confidence            2  2222222221 12222211                                               11244678999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .+||+.||++|||+.|+|+||||++-.
T Consensus       261 ~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          261 QDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             HHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            999999999999999999999998753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.1e-50  Score=408.83  Aligned_cols=234  Identities=29%  Similarity=0.409  Sum_probs=197.2

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+++|+.|+|+|++...             
T Consensus       154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~  233 (573)
T 3uto_A          154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  233 (573)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            44578999999999999999999999999999999996533 3456788999999999999984321             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++.+++.++.||+.||+|||++||+||||||+|||++.+                      
T Consensus       234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~----------------------  291 (573)
T 3uto_A          234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK----------------------  291 (573)
T ss_dssp             ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS----------------------
T ss_pred             eecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC----------------------
Confidence                           2457899999999999999999999999999999999999643                      


Q ss_pred             CCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                         ....+||+|||+|+......  ...+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..+
T Consensus       292 ---~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i  368 (573)
T 3uto_A          292 ---RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV  368 (573)
T ss_dssp             ---SCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred             ---CCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence               23468889999887665433  3468999999999999999999999999999999999999999998888877766


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......++.                                              ..+..+++++++||.+||++||++|
T Consensus       369 ~~~~~~~~~----------------------------------------------~~~~~~s~~~~dli~~~L~~dp~~R  402 (573)
T 3uto_A          369 KSCDWNMDD----------------------------------------------SAFSGISEDGKDFIRKLLLADPNTR  402 (573)
T ss_dssp             HTTCCCCCS----------------------------------------------GGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccCChhHC
Confidence            554332221                                              1123467899999999999999999


Q ss_pred             CCHHHHHcCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDV  393 (405)
Q Consensus       378 pta~elL~hp~f~~~~  393 (405)
                      ||++|+|+||||+...
T Consensus       403 ~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          403 MTIHQALEHPWLTPGN  418 (573)
T ss_dssp             CCHHHHHHSTTTSCCC
T ss_pred             cCHHHHhcCcCcCCCC
Confidence            9999999999999754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-48  Score=364.16  Aligned_cols=225  Identities=23%  Similarity=0.318  Sum_probs=172.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +.+++.++||+|+||+||+|++..   .||||+++..   ....+.+.+|+.+|++++|+|++...              
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence            568899999999999999998743   5999998643   33456788999999999999985321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++.++..++.||+.||+|||+++||||||||+|||++.++.                      
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~----------------------  170 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT----------------------  170 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEE----------------------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCc----------------------
Confidence                         245899999999999999999999999999999999999987664                      


Q ss_pred             CCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                           +||+|||+|+....     .....+||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+.+....
T Consensus       171 -----~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~  245 (307)
T 3omv_A          171 -----VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ  245 (307)
T ss_dssp             -----EEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred             -----EEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH
Confidence                 55566666543321     12335899999999999753   589999999999999999999999988776655


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+.......|.                                            .......+++.+.+||.+||+.|
T Consensus       246 ~~~~~~~~~~~p~--------------------------------------------~~~~~~~~~~~l~~li~~cl~~d  281 (307)
T 3omv_A          246 IIFMVGRGYASPD--------------------------------------------LSKLYKNCPKAMKRLVADCVKKV  281 (307)
T ss_dssp             HHHHHHTTCCCCC--------------------------------------------STTSCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhcCCCCCC--------------------------------------------cccccccchHHHHHHHHHHcCCC
Confidence            4433221111110                                            01122356778999999999999


Q ss_pred             CCCCCCHHHH------HcCCCCC
Q 015532          374 PAERLKAREA------LRHPFFT  390 (405)
Q Consensus       374 P~~Rpta~el------L~hp~f~  390 (405)
                      |++|||+.|+      |+|++-+
T Consensus       282 P~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          282 KEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             STTSCCHHHHHHHHHHHHTTCCC
T ss_pred             HhHCcCHHHHHHHHHHHhccCCC
Confidence            9999999976      4677643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=8.3e-49  Score=396.05  Aligned_cols=228  Identities=25%  Similarity=0.380  Sum_probs=175.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHH---HHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIE---IDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E---~~il~~l~~~~~~~~~----------  154 (405)
                      ++|+++++||+|+||+||+|+++.+|+.||||++++..    ........|   +.+++.+.|++|+...          
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            57999999999999999999999999999999996532    222334444   4555566788885421          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       .+.|++..++.|+.||+.||+|||++|||||||||+||||+.+|+                  
T Consensus       269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~------------------  330 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH------------------  330 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSC------------------
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCC------------------
Confidence                             246899999999999999999999999999999999999987664                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                               +||+|||+|...... ..+.+||+.|||||++.+ ..|+.++|||||||++|||++|.+||.+.+..+...
T Consensus       331 ---------vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~  401 (689)
T 3v5w_A          331 ---------VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE  401 (689)
T ss_dssp             ---------EEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH
T ss_pred             ---------EEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                     566666666543322 334689999999999974 579999999999999999999999997643221111


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .......                                               .....+..+++++++||.+||+.||+
T Consensus       402 i~~~i~~-----------------------------------------------~~~~~p~~~S~~a~dLI~~lL~~dP~  434 (689)
T 3v5w_A          402 IDRMTLT-----------------------------------------------MAVELPDSFSPELRSLLEGLLQRDVN  434 (689)
T ss_dssp             HHHHHHH-----------------------------------------------CCCCCCTTSCHHHHHHHHHHTCSCGG
T ss_pred             HHHhhcC-----------------------------------------------CCCCCCccCCHHHHHHHHHHccCCHh
Confidence            1111100                                               00112235678999999999999999


Q ss_pred             CCCC-----HHHHHcCCCCCCCC
Q 015532          376 ERLK-----AREALRHPFFTRDV  393 (405)
Q Consensus       376 ~Rpt-----a~elL~hp~f~~~~  393 (405)
                      +|++     |+||++||||++-.
T Consensus       435 ~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          435 RRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             GCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             HCCCCCCCCHHHHhcCccccCCC
Confidence            9998     89999999998743

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.6e-47  Score=379.68  Aligned_cols=280  Identities=27%  Similarity=0.431  Sum_probs=210.0

Q ss_pred             CCCCceEeeCC---ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCC
Q 015532           78 KDGHYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIG  151 (405)
Q Consensus        78 ~~~~~~~~~~~---~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~  151 (405)
                      ..+++.+..++   .+.++|++++.||+|+||+||+|++..+++.||||++...   ....+.+.+|+.+|+.+.|++++
T Consensus        45 ~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv  124 (464)
T 3ttj_A           45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII  124 (464)
T ss_dssp             -CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCC
Confidence            34567777776   4568999999999999999999999999999999999653   23456678999999999999985


Q ss_pred             CCc------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          152 GTR------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       152 ~~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                      ...                              ...+++..++.++.||+.||+|||++||+||||||+|||++.++   
T Consensus       125 ~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~---  201 (464)
T 3ttj_A          125 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC---  201 (464)
T ss_dssp             CCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS---
T ss_pred             cEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCC---
Confidence            432                              12378899999999999999999999999999999999997655   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHH
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~ll  279 (405)
                                              .+||+|||++......  ....+||+.|+|||++.+..|+.++|||||||++|+|+
T Consensus       202 ------------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  257 (464)
T 3ttj_A          202 ------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV  257 (464)
T ss_dssp             ------------------------CEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             ------------------------CEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence                                    4677777776554332  23468999999999999999999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       280 tg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                      +|++||.+.+..+++..+.+.+|.++..+..........+........-.       .....+.....+ .........+
T Consensus       258 ~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~s  329 (464)
T 3ttj_A          258 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL-------TFPKLFPDSLFP-ADSEHNKLKA  329 (464)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCC-------CHHHHSCGGGSC-CSSHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCC-------ChHHhCcccccc-cccccccccC
Confidence            99999999999999999999999998887766655555554432211100       000000000000 0000011126


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +++++||.+||++||++|||++|+|+||||+..
T Consensus       330 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          330 SQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence            689999999999999999999999999999853

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.5e-47  Score=368.05  Aligned_cols=308  Identities=37%  Similarity=0.653  Sum_probs=230.7

Q ss_pred             CCCCCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh-----hcC
Q 015532           75 PDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-----RHD  149 (405)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~-----~~~  149 (405)
                      .++....+.+..|+.+.++|++.++||+|+||+||+|++..+++.||||+++...........|+.+++.+.     |++
T Consensus        18 ~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~   97 (360)
T 3llt_A           18 GDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN   97 (360)
T ss_dssp             --CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred             cCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCC
Confidence            344455677888999999999999999999999999999999999999999876666677888999999997     777


Q ss_pred             CCCCc----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          150 IGGTR----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       150 ~~~~~----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                      +....                            ...+++..++.++.||+.||.|||++||+||||||+|||++.....+
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCE
T ss_pred             eecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccc
Confidence            64321                            12488999999999999999999999999999999999997532110


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                      .. .. ...................+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       178 ~~-~~-~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  255 (360)
T 3llt_A          178 SL-IT-VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG  255 (360)
T ss_dssp             EE-EE-EECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             cc-cc-hhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHC
Confidence            00 00 00000000000000135578999999998776666667899999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHh--hhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKY--FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                      ..||.+.+..+.+..+....+++|..+...........  ........|+.................  .    .....+
T Consensus       256 ~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~----~~~~~~  329 (360)
T 3llt_A          256 SLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP--L----YKIIKH  329 (360)
T ss_dssp             SCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCC--H----HHHCCC
T ss_pred             CCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccc--c----cccchH
Confidence            99999999999999999999999988765543222211  122234456655544443332221111  1    111235


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcCCCCC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                      +.+.+||.+||++||++|||++|+|+||||+
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            6889999999999999999999999999996

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3e-47  Score=374.38  Aligned_cols=293  Identities=33%  Similarity=0.580  Sum_probs=218.0

Q ss_pred             CCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc------CCC
Q 015532           78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH------DIG  151 (405)
Q Consensus        78 ~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~------~~~  151 (405)
                      ..+.+....++.+..+|++.+.||+|+||+||+|++..+++.||||+++........+..|+.+++.+.+.      ++.
T Consensus        83 ~~~~~~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv  162 (429)
T 3kvw_A           83 DQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI  162 (429)
T ss_dssp             TTSCBCCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBC
T ss_pred             cCCCccccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEE
Confidence            34445555677788999999999999999999999999999999999987666677788999999999765      332


Q ss_pred             CCc----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          152 GTR----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       152 ~~~----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                      ...                            ...+++..++.++.||+.||.|||++||+||||||+|||++.++     
T Consensus       163 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~-----  237 (429)
T 3kvw_A          163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG-----  237 (429)
T ss_dssp             CEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT-----
T ss_pred             EEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC-----
Confidence            210                            13478999999999999999999999999999999999997644     


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCC
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                                          ...+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|.+
T Consensus       238 --------------------~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~  297 (429)
T 3kvw_A          238 --------------------RSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP  297 (429)
T ss_dssp             --------------------SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------------CcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCC
Confidence                                123789999988776666666789999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhh----------HHHHHHhccchhhhhh
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS----------MRAVWKLLRLPNLIMQ  353 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~  353 (405)
                      ||.+.+..+.+..+.+.++.++..+........ .++.......+.........          ................
T Consensus       298 pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (429)
T 3kvw_A          298 LLPGEDEGDQLACMIELLGMPSQKLLDASKRAK-NFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNA  376 (429)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHH-HHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHH
T ss_pred             CCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhh-hccCCCCCcccccccccccccccccccccchhhccCCccchhhHhh
Confidence            999999999999999999999988776554333 22222111111000000000          0000000000001111


Q ss_pred             cccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       354 ~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      .....++.+.+||.+||++||++|||++|+|+||||++....+
T Consensus       377 l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~  419 (429)
T 3kvw_A          377 LKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP  419 (429)
T ss_dssp             TTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC------
T ss_pred             ccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCC
Confidence            1223467899999999999999999999999999999876544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2e-48  Score=362.88  Aligned_cols=221  Identities=19%  Similarity=0.305  Sum_probs=176.1

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ++|.+.++||+|+||+||+|++.     .+++.||||+++.. ....+.+.+|+++|++|+|+|++...           
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            57999999999999999999875     35788999999753 34457789999999999999984421           


Q ss_pred             -----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCc
Q 015532          155 -----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       155 -----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df  205 (405)
                                                   ...+++.++..++.||+.||.|||+++||||||||+|||++.++       
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~-------  165 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL-------  165 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-------
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC-------
Confidence                                         12578999999999999999999999999999999999997665       


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                                          .+||+|||+|+......     ....||+.|||||++.+..|+.++|||||||++|||+|
T Consensus       166 --------------------~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt  225 (299)
T 4asz_A          166 --------------------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT  225 (299)
T ss_dssp             --------------------CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             --------------------cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHc
Confidence                                45666666665432221     22579999999999999999999999999999999998


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          281 -GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       281 -g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                       |+.||.+.+..+.+..+.+..                       ...                          .+..++
T Consensus       226 ~G~~Pf~~~~~~~~~~~i~~~~-----------------------~~~--------------------------~p~~~~  256 (299)
T 4asz_A          226 YGKQPWYQLSNNEVIECITQGR-----------------------VLQ--------------------------RPRTCP  256 (299)
T ss_dssp             TTCCTTTTSCHHHHHHHHHHTC-----------------------CCC--------------------------CCTTCC
T ss_pred             CCCCCCCCCCHHHHHHHHHcCC-----------------------CCC--------------------------CCccch
Confidence             999999988877666554311                       111                          123456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcCCCCC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                      +++.+||.+||+.||++|||++|+++  |++
T Consensus       257 ~~~~~li~~cl~~dP~~RPs~~~i~~--~L~  285 (299)
T 4asz_A          257 QEVYELMLGCWQREPHMRKNIKGIHT--LLQ  285 (299)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH--HHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHH--HHH
Confidence            78999999999999999999999953  554

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=6.2e-48  Score=364.41  Aligned_cols=219  Identities=20%  Similarity=0.316  Sum_probs=173.1

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|.+.++||+|+||+||+|++.     .+++.||||+++.. ....+.+.+|+++|++|+|+||+...           
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            56899999999999999999865     36889999999753 34457789999999999999984321           


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++.++..++.||+.||.|||+++||||||||+|||++.++.    
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~----  196 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV----  196 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE----
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc----
Confidence                                           124789999999999999999999999999999999999987654    


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                                             +||+|||+++.....     ....+||+.|||||++.+..|+.++|||||||++|||
T Consensus       197 -----------------------~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~El  253 (329)
T 4aoj_A          197 -----------------------VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI  253 (329)
T ss_dssp             -----------------------EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             -----------------------EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHH
Confidence                                   566666665533221     1235799999999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC
Q 015532          279 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  357 (405)
Q Consensus       279 lt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (405)
                      +| |+.||.+.+..+.+..+.+..                       +..                          .+..
T Consensus       254 lt~G~~Pf~~~~~~~~~~~i~~g~-----------------------~~~--------------------------~p~~  284 (329)
T 4aoj_A          254 FTYGKQPWYQLSNTEAIDCITQGR-----------------------ELE--------------------------RPRA  284 (329)
T ss_dssp             HTTSCCTTCSSCHHHHHHHHHHTC-----------------------CCC--------------------------CCTT
T ss_pred             HcCCCCCCCCCCHHHHHHHHHcCC-----------------------CCC--------------------------Cccc
Confidence            99 999999988777666554311                       111                          1234


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          358 SAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       358 ~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      +++++.+||.+||+.||++|||++||+++
T Consensus       285 ~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          285 CPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             ccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            56789999999999999999999999863

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7.9e-48  Score=360.41  Aligned_cols=219  Identities=21%  Similarity=0.259  Sum_probs=175.1

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..+++.++||+|+||+||+|+..     .+++.||||+++..  ....+.+.+|+.++++++|+|++...          
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            56899999999999999999864     46789999999643  23457799999999999999984321          


Q ss_pred             ---------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          155 ---------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       155 ---------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                                                       ...+++..+..++.||+.||+|||+++||||||||+|||++.++.  
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~--  183 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN--  183 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCC--
Confidence                                             124788999999999999999999999999999999999987664  


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHH
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  276 (405)
                                               +||+|||+++.....     ....+||+.|||||++.+..|+.++|||||||++|
T Consensus       184 -------------------------~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~  238 (308)
T 4gt4_A          184 -------------------------VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW  238 (308)
T ss_dssp             -------------------------EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             -------------------------EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHH
Confidence                                     566666665533211     22357999999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcc
Q 015532          277 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  355 (405)
Q Consensus       277 ~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
                      ||+| |..||.+.+..+.+..+...  .                     ...                          .+
T Consensus       239 El~t~g~~Pf~~~~~~~~~~~i~~~--~---------------------~~~--------------------------~p  269 (308)
T 4gt4_A          239 EVFSYGLQPYCGYSNQDVVEMIRNR--Q---------------------VLP--------------------------CP  269 (308)
T ss_dssp             HHHTTTCCTTTTCCHHHHHHHHHTT--C---------------------CCC--------------------------CC
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcC--C---------------------CCC--------------------------Cc
Confidence            9998 89999998877766554321  1                     111                          12


Q ss_pred             cCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      +.+++.+.+|+.+||+.||++|||+.||+++
T Consensus       270 ~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          270 DDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3456789999999999999999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.2e-46  Score=365.80  Aligned_cols=310  Identities=28%  Similarity=0.521  Sum_probs=223.5

Q ss_pred             CCCCCCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc-----
Q 015532           74 RPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-----  148 (405)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~-----  148 (405)
                      ......+++++..|+.+.++|++.++||+|+||+||+|++..+++.||||+++......+.+.+|+.+++.+.|.     
T Consensus        19 ~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~   98 (397)
T 1wak_A           19 NDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP   98 (397)
T ss_dssp             ---CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCG
T ss_pred             ccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCC
Confidence            344556788899999999999999999999999999999999999999999987666678889999999999853     


Q ss_pred             ---CCCCCc--------------------------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcE
Q 015532          149 ---DIGGTR--------------------------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENI  192 (405)
Q Consensus       149 ---~~~~~~--------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NI  192 (405)
                         ++....                                ...+++..++.++.||+.||.|||++ ||+||||||+||
T Consensus        99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NI  178 (397)
T 1wak_A           99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI  178 (397)
T ss_dssp             GGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGE
T ss_pred             CcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHe
Confidence               342210                                13588999999999999999999998 999999999999


Q ss_pred             EEecccccccCCccccccCCCCC-----------------C-----cccCCCCCCCceeccCCCCccccCCccceecCCC
Q 015532          193 LLVSAEYVKVPDYKFLSRSSKDG-----------------S-----YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRH  250 (405)
Q Consensus       193 li~~~~~~k~~df~~~~~~~~~~-----------------~-----~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~  250 (405)
                      |++.++.....+++........+                 .     ..........+||+|||++..........+||+.
T Consensus       179 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~  258 (397)
T 1wak_A          179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQ  258 (397)
T ss_dssp             EECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGG
T ss_pred             eEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCc
Confidence            99877632221111110000000                 0     0000012347999999999877666666789999


Q ss_pred             cchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCC
Q 015532          251 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA  324 (405)
Q Consensus       251 y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~  324 (405)
                      |+|||++.+..++.++|||||||++|+|++|..||.+.+      ..+.+..+.+..|.+|..+......... ++....
T Consensus       259 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~  337 (397)
T 1wak_A          259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKE-FFTKKG  337 (397)
T ss_dssp             GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGG-TBCTTS
T ss_pred             ccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccc-ccCCcc
Confidence            999999999999999999999999999999999997654      5677888899999999887654433222 222221


Q ss_pred             cccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          325 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      ....................       .......+..+.+||.+||++||++|||++|+|+||||++
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          338 DLKHITKLKPWGLFEVLVEK-------YEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             SBSSCCCCCCCCHHHHHHHT-------SCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ccccccccCCcchhHhhhhh-------cccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            11111111111111111111       1112234678999999999999999999999999999974

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=4.1e-47  Score=357.17  Aligned_cols=261  Identities=31%  Similarity=0.542  Sum_probs=192.7

Q ss_pred             eCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------hhhHHHHHHHHHHHHHh---hcCCCCCc--
Q 015532           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLA---RHDIGGTR--  154 (405)
Q Consensus        86 ~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~il~~l~---~~~~~~~~--  154 (405)
                      +|+.+.++|++.++||+|+||+||+|++..+++.||||+++...      .......+|+.+++.+.   |+++....  
T Consensus         3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            45667889999999999999999999999999999999986322      22345677888888876   88874311  


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.++     
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~-----  157 (308)
T 3g33_A           83 CATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG-----  157 (308)
T ss_dssp             EEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS-----
T ss_pred             eeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-----
Confidence                                           12289999999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                                            .+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       158 ----------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g  215 (308)
T 3g33_A          158 ----------------------TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR  215 (308)
T ss_dssp             ----------------------CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTS
T ss_pred             ----------------------CEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhC
Confidence                                  4666777766543322  2335789999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      .+||.+.+..+.+..+.+..+.++...                   |+........   .+ ....+..........++.
T Consensus       216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~-------------------~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~  272 (308)
T 3g33_A          216 KPLFCGNSEADQLGKIFDLIGLPPEDD-------------------WPRDVSLPRG---AF-PPRGPRPVQSVVPEMEES  272 (308)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCTTT-------------------SCSSCSSCGG---GS-CCCCCCCHHHHSCSCCHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhh-------------------ccchhhcccc---cc-CCCCCCcHHHhCccccHH
Confidence            999999999999998888887766432                   1111100000   00 000111122233566789


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      +.+||.+||++||++|||+.|+|+||||++....|
T Consensus       273 ~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~~~~  307 (308)
T 3g33_A          273 GAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP  307 (308)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSTTC-------
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhcCccccCCCCCC
Confidence            99999999999999999999999999999876544

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=3.4e-46  Score=357.08  Aligned_cols=304  Identities=44%  Similarity=0.812  Sum_probs=230.2

Q ss_pred             CCCCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCC-cEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 015532           76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR  154 (405)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~-~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~  154 (405)
                      ++..+++....|+.+.++|++.+.||+|+||+||+|++..++ +.||||+++......+.+.+|+.+++.+.|++.....
T Consensus         3 ~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A            3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             BCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             cccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCce
Confidence            456778889999999999999999999999999999998776 7899999987666677888999999999987631100


Q ss_pred             ----------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccc
Q 015532          155 ----------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       155 ----------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~  200 (405)
                                                        ...+++..++.++.||+.||.|||++||+||||||+|||+...+..
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~  162 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE  162 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEE
T ss_pred             eEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccc
Confidence                                              1358899999999999999999999999999999999999665433


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       201 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                      .+.+....        .....+....+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       163 ~~~~~~~~--------~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  234 (355)
T 2eu9_A          163 TLYNEHKS--------CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR  234 (355)
T ss_dssp             EEECCC-C--------CCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             cccccccc--------ccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence            32221110        0000124567999999999877666666789999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+....+.+..+.+..+++|..+........  ++. .....|+............   ..............+.
T Consensus       235 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  308 (355)
T 2eu9_A          235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQK--YFY-KGGLVWDENSSDGRYVKEN---CKPLKSYMLQDSLEHV  308 (355)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGG--GEE-TTEECCCTTSHHHHHHHHH---CCCGGGGCSCCSHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchh--hhc-ccccccccccchhcccccc---CCcccccccccchhHH
Confidence            999999999999999999999999988765542211  111 1122333322111111111   1100001111123366


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ++.+||.+||+.||++|||+.|+|+||||++-.
T Consensus       309 ~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          309 QLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence            899999999999999999999999999999753

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2e-46  Score=371.83  Aligned_cols=286  Identities=29%  Similarity=0.458  Sum_probs=192.3

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.++|++.+.||+|+||+||+|++..+++.||||++...   ....+.+.+|+.+|+.+.|++++...           
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  129 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF  129 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence            3568899999999999999999999999999999998642   23446688999999999999985421           


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       130 ~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  209 (458)
T 3rp9_A          130 DELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP  209 (458)
T ss_dssp             CCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred             ceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence                                134789999999999999999999999999999999999999999999999988765432


Q ss_pred             CCcccCC---CCCCCceeccCCCCccccCCccceecCCCcchhHHHh-CCCCCCchhHHHHHHHHHHHHh----------
Q 015532          215 GSYFKNL---PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCS----------  280 (405)
Q Consensus       215 ~~~~~~~---~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~~llt----------  280 (405)
                      .......   .......+.+|+............+||+.|+|||++. +..|+.++|||||||++|||++          
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~  289 (458)
T 3rp9_A          210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHA  289 (458)
T ss_dssp             TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGG
T ss_pred             cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccc
Confidence            2111000   0112234455554444334445578999999999875 5569999999999999999998          


Q ss_pred             -CCCCCCCCC--------------------hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHH
Q 015532          281 -GEALFQTHE--------------------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR  339 (405)
Q Consensus       281 -g~~pf~~~~--------------------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (405)
                       |.++|.+.+                    ..+++..|...+|.++...+..........+...    ++.         
T Consensus       290 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~----~~~---------  356 (458)
T 3rp9_A          290 DRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI----FPK---------  356 (458)
T ss_dssp             GCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT----SCC---------
T ss_pred             cccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh----cCC---------
Confidence             778887654                    3577888889999988876544322211111100    000         


Q ss_pred             HHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                            .............++++.+||.+||++||++|||++|+|+||||++..
T Consensus       357 ------~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          357 ------REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             ------CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             ------CCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence                  001111223345678999999999999999999999999999999753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-46  Score=360.31  Aligned_cols=257  Identities=29%  Similarity=0.508  Sum_probs=200.6

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|++.+.||+|+||.||+|.+..+|+.||||++...   ....+.+.+|+.+|+.+.|+++....            
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            457899999999999999999999999999999998542   23456678999999999999884321            


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++.++                 
T Consensus       103 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----------------  165 (367)
T 1cm8_A          103 TDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC-----------------  165 (367)
T ss_dssp             CCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------------
T ss_pred             ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC-----------------
Confidence                               13478889999999999999999999999999999999997654                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                                .+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+++
T Consensus       166 ----------~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l  235 (367)
T 1cm8_A          166 ----------ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL  235 (367)
T ss_dssp             ----------CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             ----------CEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                      4677777777665555555689999999999987 67999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCChHHHHHhhHhh-HHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          295 AMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ..+.+..|.+|..+........ ..+.......                    ............++.+.+||.+||++|
T Consensus       236 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~ll~~mL~~d  295 (367)
T 1cm8_A          236 KEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL--------------------EKKDFASILTNASPLAVNLLEKMLVLD  295 (367)
T ss_dssp             HHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC--------------------CCCCGGGTCTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC--------------------CCCCHHHHCCCCCHHHHHHHHHHccCC
Confidence            9999999999987765432111 1111111000                    000111223456789999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~  393 (405)
                      |++|||++|+|+||||+.-.
T Consensus       296 P~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          296 AEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             TTTSCCHHHHHHSGGGTTTC
T ss_pred             hhHCCCHHHHhcChHHHhhc
Confidence            99999999999999998753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3.6e-46  Score=361.49  Aligned_cols=290  Identities=35%  Similarity=0.622  Sum_probs=217.0

Q ss_pred             CCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcC------CC
Q 015532           78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD------IG  151 (405)
Q Consensus        78 ~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~------~~  151 (405)
                      ....+.+..|+.+.++|++.+.||+|+||+||+|++..+++.||||+++........+..|+.+++.+.+++      +.
T Consensus        40 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv  119 (382)
T 2vx3_A           40 DNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV  119 (382)
T ss_dssp             TTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBC
T ss_pred             CCCcEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEE
Confidence            334467788899999999999999999999999999999999999999876666677888999999998665      21


Q ss_pred             CC----------------------------ccccCCHHHHHHHHHHHHHHHHHHH--HCCcEecCCCCCcEEEecccccc
Q 015532          152 GT----------------------------RYRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       152 ~~----------------------------~~~~l~~~~~~~~~~qi~~aL~~LH--~~givHrDlkp~NIli~~~~~~k  201 (405)
                      ..                            ....+++..++.++.||+.||.|||  +.||+||||||+|||++.+    
T Consensus       120 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~----  195 (382)
T 2vx3_A          120 HLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP----  195 (382)
T ss_dssp             CEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST----
T ss_pred             EeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC----
Confidence            10                            0134789999999999999999999  5799999999999999542    


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                                           .+..+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       196 ---------------------~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  254 (382)
T 2vx3_A          196 ---------------------KRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG  254 (382)
T ss_dssp             ---------------------TSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ---------------------CCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhC
Confidence                                 23468899999887766655667899999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCC----------CCCchhhHHHHHHhcc-chhh
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD----------GATSRDSMRAVWKLLR-LPNL  350 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~  350 (405)
                      .+||.+.+..+.+..+.+..+.+|..+..... ....++.......|..          .......+........ .+..
T Consensus       255 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  333 (382)
T 2vx3_A          255 EPLFSGANEVDQMNKIVEVLGIPPAHILDQAP-KARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGG  333 (382)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCT-THHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhH-HHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCc
Confidence            99999999999999999999998887654432 2233333221111100          0000011111111000 0000


Q ss_pred             h----hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          351 I----MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       351 ~----~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .    .......++++++||.+||++||++|||++|+|+||||++..
T Consensus       334 ~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          334 RRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             TTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             cccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence            0    000011235789999999999999999999999999998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=8.7e-47  Score=359.48  Aligned_cols=221  Identities=24%  Similarity=0.346  Sum_probs=171.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecchh--hhhHHHHHHHHHHHHHhhc-CCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARH-DIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~-~~~~~~--------  154 (405)
                      .++|++.++||+|+||+||+|++..+     ++.||||+++...  ...+.+.+|+++|.++.|+ ||+...        
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            36899999999999999999997654     3689999996532  3456788999999999885 553211        


Q ss_pred             ------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 ------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 ------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                                          ...+++..+..++.||+.||+|||+++||||||||+|||++.++
T Consensus       143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~  222 (353)
T 4ase_A          143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN  222 (353)
T ss_dssp             CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCC
Confidence                                                12368889999999999999999999999999999999998776


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHH
Q 015532          199 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  273 (405)
Q Consensus       199 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  273 (405)
                      .+                           ||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||
T Consensus       223 ~v---------------------------Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv  275 (353)
T 4ase_A          223 VV---------------------------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV  275 (353)
T ss_dssp             CE---------------------------EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             CE---------------------------EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHH
Confidence            55                           55555555433221     12357999999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhh
Q 015532          274 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  352 (405)
Q Consensus       274 il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (405)
                      ++|||+| |..||.+.+..+.+..+...                      +.+...                        
T Consensus       276 ~l~El~t~G~~Pf~~~~~~~~~~~~i~~----------------------g~~~~~------------------------  309 (353)
T 4ase_A          276 LLWEIFSLGASPYPGVKIDEEFCRRLKE----------------------GTRMRA------------------------  309 (353)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHH----------------------TCCCCC------------------------
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHHc----------------------CCCCCC------------------------
Confidence            9999998 99999886543333222111                      111111                        


Q ss_pred             hcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       353 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                        ++.+++++.+||.+||+.||++|||+.||++|
T Consensus       310 --p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          310 --PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence              23456789999999999999999999999987

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.1e-45  Score=351.13  Aligned_cols=298  Identities=46%  Similarity=0.819  Sum_probs=223.9

Q ss_pred             CceEeeCCccCCCeEEEeeeecccceeEEEEEe-cCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCC------
Q 015532           81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT------  153 (405)
Q Consensus        81 ~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~-~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~------  153 (405)
                      ++.+..|+.+.++|++.+.||+|+||+||+|.+ ..+++.||||+++......+.+.+|+.+++.+.|++....      
T Consensus         3 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A            3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             GGTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             ceeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            445667888999999999999999999999998 5678999999998766667788899999999999763110      


Q ss_pred             c----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCc
Q 015532          154 R----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       154 ~----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df  205 (405)
                      .                            ...+++..++.++.||+.||.|||++||+||||||+|||++..+.....+.
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           83 LEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             ecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCC
Confidence            0                            124788999999999999999999999999999999999976543222111


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                      +...        ......+..+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       163 ~~~~--------~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  234 (339)
T 1z57_A          163 KIKR--------DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF  234 (339)
T ss_dssp             ---C--------EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             cccc--------ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence            1000        00001145689999999987766666678999999999999989999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       286 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      ...+..+.+..+.+..+++|..+.......  .++ ......|...........   ................++.+.+|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l  308 (339)
T 1z57_A          235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYF-HHDRLDWDEHSSAGRYVS---RACKPLKEFMLSQDVEHERLFDL  308 (339)
T ss_dssp             CCSCHHHHHHHHHHHHCSCCHHHHHHCSCG--GGE-ETTEECCCTTSHHHHHHH---HHCCCGGGGCSCCSHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHhhccch--hHH-hhccccccccccccchhh---hcCcchhhhcccchhhHHHHHHH
Confidence            999999999999999999998876654321  111 112334443222111111   11111111111223446789999


Q ss_pred             HHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          366 LQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      |.+||+.||++|||+.|+|+||||+.-
T Consensus       309 i~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          309 IQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             HHHHhCcCcccccCHHHHhcCHHHHHH
Confidence            999999999999999999999999863

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.9e-46  Score=352.09  Aligned_cols=261  Identities=30%  Similarity=0.453  Sum_probs=196.2

Q ss_pred             eeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        85 ~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      ..++.+.++|+++++||+|+||+||+|++. +++.||||+++...   ...+.+.+|+++++.+.|+++....       
T Consensus        14 ~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   92 (311)
T 3niz_A           14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER   92 (311)
T ss_dssp             -CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS
T ss_pred             eeecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC
Confidence            345678899999999999999999999985 58899999996432   2346678999999999999985321       


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++                
T Consensus        93 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~----------------  156 (311)
T 3niz_A           93 CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG----------------  156 (311)
T ss_dssp             CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC----------------
T ss_pred             EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC----------------
Confidence                                23488999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                 .+||+|||++......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+...
T Consensus       157 -----------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  225 (311)
T 3niz_A          157 -----------ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD  225 (311)
T ss_dssp             -----------CEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred             -----------CEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence                       4566666666543321   223478999999999987 4689999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+.+..+...++.++...+...... ..+....  ....                 ............++++.+||.+||
T Consensus       226 ~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~li~~~L  285 (311)
T 3niz_A          226 DDQLPKIFSILGTPNPREWPQVQEL-PLWKQRT--FQVF-----------------EKKPWSSIIPGFCQEGIDLLSNML  285 (311)
T ss_dssp             TTHHHHHHHHHCCCCTTTSGGGTTS-HHHHSCC--CCCC-----------------CCCCHHHHSTTCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCCCChHHhhhhhcc-chhhhcc--cccc-----------------cCCcHHHhCcccCHHHHHHHHHHc
Confidence            8888888888876554322111000 0000000  0000                 000011123456778999999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ++||++|||++|+|+||||++-.
T Consensus       286 ~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          286 CFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             CSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             CCChhHCCCHHHHhcCcccccCC
Confidence            99999999999999999999743

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=4.8e-46  Score=353.03  Aligned_cols=226  Identities=26%  Similarity=0.351  Sum_probs=186.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+|+.||||++....   ...+.+.+|+.+++.+.|+++....             
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            467999999999999999999999999999999996532   3345678899999999999984321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++                      
T Consensus        94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~----------------------  151 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM----------------------  151 (328)
T ss_dssp             CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS----------------------
T ss_pred             ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC----------------------
Confidence                          24578999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           .+||+|||++......  ....+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+..+....+
T Consensus       152 -----~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  226 (328)
T 3fe3_A          152 -----NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV  226 (328)
T ss_dssp             -----CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             -----CEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                 4667777766543322  2345799999999999988875 7899999999999999999999988776665555


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .......|                                                  ...++++.+||.+||+.||++|
T Consensus       227 ~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L~~dP~~R  256 (328)
T 3fe3_A          227 LRGKYRIP--------------------------------------------------FYMSTDCENLLKRFLVLNPIKR  256 (328)
T ss_dssp             HHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHCCSSTTTS
T ss_pred             HhCCCCCC--------------------------------------------------CCCCHHHHHHHHHHCCCChhHC
Confidence            43211111                                                  2346789999999999999999


Q ss_pred             CCHHHHHcCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDV  393 (405)
Q Consensus       378 pta~elL~hp~f~~~~  393 (405)
                      ||++|+|+||||+...
T Consensus       257 ~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          257 GTLEQIMKDRWINAGH  272 (328)
T ss_dssp             CCHHHHTTCTTTTTTC
T ss_pred             cCHHHHhcCHhhcCCC
Confidence            9999999999998754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.4e-46  Score=357.63  Aligned_cols=236  Identities=27%  Similarity=0.413  Sum_probs=194.6

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-------hhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      ..+.++|++.+.||+|+||+||+|+++.+|+.||||+++....       ..+.+.+|+.+|+.+.|+++....      
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~   87 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR   87 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC
Confidence            4567889999999999999999999999999999999965322       346788999999999999984321      


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..+..++.||+.||.|||++||+||||||+|||++.++.              
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~--------------  153 (361)
T 2yab_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI--------------  153 (361)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS--------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCC--------------
Confidence                                 245789999999999999999999999999999999999975431              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                               ....+||+|||++......  ....+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..
T Consensus       154 ---------~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~  224 (361)
T 2yab_A          154 ---------PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ  224 (361)
T ss_dssp             ---------SSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ---------CccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                     1225788888888654433  23467999999999999989999999999999999999999999998877


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +.+..+......++..                                              .+...++.+++||.+||.
T Consensus       225 ~~~~~i~~~~~~~~~~----------------------------------------------~~~~~s~~~~~li~~~L~  258 (361)
T 2yab_A          225 ETLANITAVSYDFDEE----------------------------------------------FFSQTSELAKDFIRKLLV  258 (361)
T ss_dssp             HHHHHHHTTCCCCCHH----------------------------------------------HHTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHhcCCCCCch----------------------------------------------hccCCCHHHHHHHHHHCC
Confidence            7766665433322221                                              123457789999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~  392 (405)
                      .||++|||++|+|+||||+..
T Consensus       259 ~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          259 KETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             SSTTTSCCHHHHHTSTTTSCS
T ss_pred             CChhHCcCHHHHhcCcCcCCC
Confidence            999999999999999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.7e-45  Score=355.09  Aligned_cols=289  Identities=30%  Similarity=0.493  Sum_probs=214.4

Q ss_pred             CCCceEeeCCccC-CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh-----------
Q 015532           79 DGHYVFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-----------  146 (405)
Q Consensus        79 ~~~~~~~~~~~~~-~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~-----------  146 (405)
                      +++++...++.+. ++|++.+.||+|+||+||+|++..+++.||||+++......+.+.+|+.+++++.           
T Consensus         5 ~~~~p~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~   84 (373)
T 1q8y_A            5 GGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG   84 (373)
T ss_dssp             --CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred             CCceeeecCCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccc
Confidence            3455666666664 6899999999999999999999999999999999876666777889999999988           


Q ss_pred             hcCCCCCc--------------------------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEE
Q 015532          147 RHDIGGTR--------------------------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENIL  193 (405)
Q Consensus       147 ~~~~~~~~--------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIl  193 (405)
                      |+++....                                ...+++..++.++.||+.||.|||++ ||+||||||+|||
T Consensus        85 ~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIl  164 (373)
T 1q8y_A           85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL  164 (373)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred             cchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeE
Confidence            45553221                                12478899999999999999999998 9999999999999


Q ss_pred             EecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHH
Q 015532          194 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  273 (405)
Q Consensus       194 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  273 (405)
                      ++..+.                     .+....+||+|||++...........||+.|+|||++.+..++.++|||||||
T Consensus       165 l~~~~~---------------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~  223 (373)
T 1q8y_A          165 MEIVDS---------------------PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTAC  223 (373)
T ss_dssp             EEEEET---------------------TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHH
T ss_pred             EeccCC---------------------CcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHH
Confidence            975431                     01234689999999877666556678999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc
Q 015532          274 ILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  347 (405)
Q Consensus       274 il~~lltg~~pf~~~~------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (405)
                      ++|+|++|..||.+..      ..+.+..+...+|.+|..+......... ++................ ......    
T Consensus       224 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~----  297 (373)
T 1q8y_A          224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRT-FFNSRGLLRNISKLKFWP-LEDVLT----  297 (373)
T ss_dssp             HHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHH-HBCC--CBSSCCCCCBCC-HHHHHH----
T ss_pred             HHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhh-hcCCcchhcccccccccc-hhhhhh----
Confidence            9999999999998654      5667888889999999887655433222 222211111111110000 011100    


Q ss_pred             hhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       348 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                        .........+.++.+||.+||+.||++|||++|+|+||||++.....
T Consensus       298 --~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          298 --EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             --HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred             --hcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCcc
Confidence              00112234567899999999999999999999999999999865443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.7e-46  Score=360.79  Aligned_cols=292  Identities=24%  Similarity=0.384  Sum_probs=195.5

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHh-hcCCCCCc--------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTR--------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~-~~~~~~~~--------  154 (405)
                      +..+.++|++.+.||+|+||+||+|.+..+++.||||++...   ........+|+.+++.+. |+++....        
T Consensus         4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~   83 (388)
T 3oz6_A            4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND   83 (388)
T ss_dssp             CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred             cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence            345668999999999999999999999999999999998542   334566778999999998 88874321        


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        84 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           84 RDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             SCEEEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             CEEEEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence                               1347888999999999999999999999999999999999988887777777765432211


Q ss_pred             CcccCCCCCCCceeccCCCC-ccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGST-TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                      .....    ....+.+.... ..........+||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..++
T Consensus       164 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  239 (388)
T 3oz6_A          164 RVTNN----IPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ  239 (388)
T ss_dssp             CCCCC----GGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ccccc----ccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            10000    00000000000 000111233589999999999987 5789999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhH-Hhhhc----C--CcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAE-KYFRR----G--ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~-~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +..+...++.++............ .+...    .  ....+..   ........       ..........++++.+||
T Consensus       240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~~dll  309 (388)
T 3oz6_A          240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRD---IFTKWKNL-------LLKINPKADCNEEALDLL  309 (388)
T ss_dssp             HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCC---CHHHHHHH-------HHHHCTTCCCCHHHHHHH
T ss_pred             HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHH---hCcchhhh-------cccccccccCCHHHHHHH
Confidence            999999998887765432211100 00000    0  0000000   00000000       000111235678999999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      .+||++||++|||++|+|+||||+.-
T Consensus       310 ~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          310 DKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             HHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             HHhhccCcccCCCHHHHhCCHHHHHh
Confidence            99999999999999999999999764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=6.8e-46  Score=357.40  Aligned_cols=257  Identities=28%  Similarity=0.508  Sum_probs=191.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.+.|+++....            
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            458899999999999999999999999999999998642   23456678999999999999884321            


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++.++                 
T Consensus       107 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-----------------  169 (367)
T 2fst_X          107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----------------  169 (367)
T ss_dssp             CCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----------------
T ss_pred             CeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC-----------------
Confidence                               13478899999999999999999999999999999999997654                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                                .+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+
T Consensus       170 ----------~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l  239 (367)
T 2fst_X          170 ----------ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL  239 (367)
T ss_dssp             ----------CEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ----------CEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                      4677777777665554555689999999999987 57899999999999999999999999999999999


Q ss_pred             HHHHHHhCCCChHHHHHhhHh-hHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          295 AMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ..+.+.+|.++.......... ...+.......  +                  ...........++.+.+||.+||++|
T Consensus       240 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~dLl~~mL~~d  299 (367)
T 2fst_X          240 KLILRLVGTPGAELLKKISSESARNYIQSLTQM--P------------------KMNFANVFIGANPLAVDLLEKMLVLD  299 (367)
T ss_dssp             HHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC--C------------------CCCHHHHTTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC--C------------------CCCHHHHCCCCCHHHHHHHHHhCCCC
Confidence            999999999887665432211 11111110000  0                  00011122345778999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~  393 (405)
                      |++|||++|+|+||||++..
T Consensus       300 P~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          300 SDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             GGGSCCHHHHHTSGGGTTTC
T ss_pred             cccCcCHHHHhcChhhhhcc
Confidence            99999999999999998753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=3.1e-45  Score=353.50  Aligned_cols=272  Identities=29%  Similarity=0.496  Sum_probs=211.0

Q ss_pred             CCCCCCCCceEeeCCc---cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhh
Q 015532           74 RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        74 ~~~~~~~~~~~~~~~~---~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~  147 (405)
                      ......+++....+..   +.++|.+.+.||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.+.|
T Consensus        21 ~~~~~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h  100 (371)
T 4exu_A           21 SLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH  100 (371)
T ss_dssp             CCSSCTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC
T ss_pred             eeeccccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCC
Confidence            3445666777666653   678999999999999999999999999999999999653   2345677899999999999


Q ss_pred             cCCCCCc------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          148 HDIGGTR------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       148 ~~~~~~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                      +++....                              ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       101 ~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  180 (371)
T 4exu_A          101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED  180 (371)
T ss_dssp             TTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             CCchhhhhheeccCCcccceeEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCC
Confidence            9885321                              1247899999999999999999999999999999999999755


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILV  276 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~  276 (405)
                      +                           .+||+|||++...........||+.|+|||++.+ ..++.++|||||||++|
T Consensus       181 ~---------------------------~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (371)
T 4exu_A          181 C---------------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA  233 (371)
T ss_dssp             C---------------------------CEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHH
T ss_pred             C---------------------------CEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHH
Confidence            4                           5677777777666555555689999999999987 67899999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc-hhhhhhcc
Q 015532          277 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL-PNLIMQHV  355 (405)
Q Consensus       277 ~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  355 (405)
                      +|++|..||.+.+..+.+..+.+..+.++..+...........+...                    .... ........
T Consensus       234 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~  293 (371)
T 4exu_A          234 EMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS--------------------LPQTPRKDFTQLF  293 (371)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHH--------------------SCCCCCCCHHHHS
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhc--------------------cCCCcchhHHHhc
Confidence            99999999999999999999999999888776543322111111000                    0000 00111223


Q ss_pred             cCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ...++.+.+||.+||++||++|||++|+|+||||+..
T Consensus       294 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          294 PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             TTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             cccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            4567899999999999999999999999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.2e-46  Score=350.93  Aligned_cols=234  Identities=24%  Similarity=0.380  Sum_probs=195.9

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .+.++|++.+.||+|+||+||+|.+..+++.||+|+++......+.+.+|+.+++.+.|+++....              
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            456899999999999999999999999999999999976666667788999999999999984321              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++..                       
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-----------------------  138 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-----------------------  138 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-----------------------
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-----------------------
Confidence                          1358899999999999999999999999999999999999652                       


Q ss_pred             CCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                        .+..+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.
T Consensus       139 --~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  216 (321)
T 1tki_A          139 --RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM  216 (321)
T ss_dssp             --SCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             --CCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH
Confidence              13467888888887654332  33679999999999998889999999999999999999999999988877766665


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .....++..                                              .+..++.++.+||.+||..||++||
T Consensus       217 ~~~~~~~~~----------------------------------------------~~~~~s~~~~~li~~~L~~dp~~Rp  250 (321)
T 1tki_A          217 NAEYTFDEE----------------------------------------------AFKEISIEAMDFVDRLLVKERKSRM  250 (321)
T ss_dssp             HTCCCCCHH----------------------------------------------HHTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             cCCCCCChh----------------------------------------------hhccCCHHHHHHHHHHcCCChhHCc
Confidence            433322221                                              1234577899999999999999999


Q ss_pred             CHHHHHcCCCCCCCC
Q 015532          379 KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ta~elL~hp~f~~~~  393 (405)
                      |+.|+|+||||++..
T Consensus       251 t~~e~l~hp~~~~~~  265 (321)
T 1tki_A          251 TASEALQHPWLKQKI  265 (321)
T ss_dssp             CHHHHHHSHHHHSCG
T ss_pred             CHHHHhcChhhccCc
Confidence            999999999998753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.4e-45  Score=359.38  Aligned_cols=277  Identities=27%  Similarity=0.407  Sum_probs=197.5

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.++|++.+.||+|+||+||+|++..+++.||||+++..   ....+.+.+|+.+|+.+.|+++....           
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            3568899999999999999999999999999999999653   23446788999999999999874321           


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       103 ~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~  182 (432)
T 3n9x_A          103 DELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE  182 (432)
T ss_dssp             CCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred             CeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence                                134789999999999999999999999999999999999988777777766665433221


Q ss_pred             CCcccCCCCCCCceeccCCCC-------ccccCCccceecCCCcchhHHHh-CCCCCCchhHHHHHHHHHHHHh------
Q 015532          215 GSYFKNLPKSSAIKLIDFGST-------TFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCS------  280 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a-------~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~~llt------  280 (405)
                      ....         ...++...       ..........+||+.|+|||++. +..|+.++|||||||++|||++      
T Consensus       183 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          183 KDTN---------IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             -------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccc---------ccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            1000         00000000       00001123468999999999974 5569999999999999999998      


Q ss_pred             -----CCCCCCCCC-----------------hHHHHHHHHHHhCCCChHHHHHhhHhh-HHhhhcCCcccCCCCCCchhh
Q 015532          281 -----GEALFQTHE-----------------NLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDS  337 (405)
Q Consensus       281 -----g~~pf~~~~-----------------~~~~~~~i~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  337 (405)
                           |.++|.+.+                 ..+++..+...+|.++...+....... ..+.....             
T Consensus       254 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~-------------  320 (432)
T 3n9x_A          254 NDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP-------------  320 (432)
T ss_dssp             SSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC-------------
T ss_pred             cccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCC-------------
Confidence                 555665543                 367888899999998877654322111 11111100             


Q ss_pred             HHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                             ...+..........++++.+||.+||++||++|||++|+|+||||++...
T Consensus       321 -------~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          321 -------HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             -------CCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             -------CCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence                   00011111223456889999999999999999999999999999997543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=5.9e-46  Score=355.75  Aligned_cols=224  Identities=25%  Similarity=0.396  Sum_probs=181.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHH-hhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRL-ARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l-~~~~~~~~~------------  154 (405)
                      ++|++++.||+|+||+||+|+++.+++.||||++++.    ....+....|+.++..+ .|+++....            
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv  102 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV  102 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence            6799999999999999999999999999999999753    23345677899999998 577774321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                    
T Consensus       103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~--------------------  162 (353)
T 3txo_A          103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH--------------------  162 (353)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--------------------
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCC--------------------
Confidence                           245889999999999999999999999999999999999976664                    


Q ss_pred             CCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                             +||+|||++....   ......+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..+....
T Consensus       163 -------ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~  235 (353)
T 3txo_A          163 -------CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA  235 (353)
T ss_dssp             -------EEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             -------EEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                   5666666655322   122346899999999999998899999999999999999999999999888777666


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.......|                                                  ...+..+.+||.+||+.||++
T Consensus       236 i~~~~~~~p--------------------------------------------------~~~~~~~~~li~~lL~~dP~~  265 (353)
T 3txo_A          236 ILNDEVVYP--------------------------------------------------TWLHEDATGILKSFMTKNPTM  265 (353)
T ss_dssp             HHHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHcCCCCCC--------------------------------------------------CCCCHHHHHHHHHHhhhCHHH
Confidence            644221111                                                  234678999999999999999


Q ss_pred             CCCH------HHHHcCCCCCCC
Q 015532          377 RLKA------REALRHPFFTRD  392 (405)
Q Consensus       377 Rpta------~elL~hp~f~~~  392 (405)
                      |+++      +|+++||||++-
T Consensus       266 R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          266 RLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             STTSGGGTCTHHHHTSGGGTTC
T ss_pred             ccCCcccCCHHHHhhCCcccCC
Confidence            9998      999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.4e-45  Score=344.03  Aligned_cols=253  Identities=30%  Similarity=0.484  Sum_probs=193.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.++||+|+||+||+|++..+++.||||+++...   ...+.+.+|+.+++.+.|+++....              
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57999999999999999999999999999999996432   3346778999999999999985421              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+|||++.++                       
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~-----------------------  138 (292)
T 3o0g_A           82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-----------------------  138 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------------------
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----------------------
Confidence                         24688999999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCC-CCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEAL-FQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~p-f~~~~~~~~~~~  296 (405)
                          .+||+|||++......   .....||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+.+..
T Consensus       139 ----~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~  214 (292)
T 3o0g_A          139 ----ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_dssp             ----CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred             ----CEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHH
Confidence                4566666666543221   22357899999999998765 89999999999999999987666 677777788888


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+..+.++...+.......    .   ...++.              ..............+..+.+||.+||++||++
T Consensus       215 i~~~~~~~~~~~~~~~~~~~----~---~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  273 (292)
T 3o0g_A          215 IFRLLGTPTEEQWPSMTKLP----D---YKPYPM--------------YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQ  273 (292)
T ss_dssp             HHHHHCCCCTTTCTTGGGST----T---CCCCCC--------------CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHHHhCCCChhhhhhhcccc----c---cccccc--------------ccCCcchhhcccccChHHHHHHHHHhccChhh
Confidence            88888776543221110000    0   000000              00001111223456789999999999999999


Q ss_pred             CCCHHHHHcCCCCCCC
Q 015532          377 RLKAREALRHPFFTRD  392 (405)
Q Consensus       377 Rpta~elL~hp~f~~~  392 (405)
                      |||++|+|+||||++.
T Consensus       274 R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          274 RISAEEALQHPYFSDF  289 (292)
T ss_dssp             SCCHHHHHTSGGGTTC
T ss_pred             CCCHHHHhcCcccccC
Confidence            9999999999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.3e-45  Score=354.95  Aligned_cols=240  Identities=25%  Similarity=0.401  Sum_probs=193.2

Q ss_pred             ceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc----
Q 015532           82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR----  154 (405)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~----  154 (405)
                      +....+..+.++|++.+.||+|+||.||+|.+..+++.||||+++...   ...+.+.+|+.+++.+.|+++....    
T Consensus        19 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~   98 (362)
T 2bdw_A           19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ   98 (362)
T ss_dssp             -----CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             EeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            444555667789999999999999999999999999999999996532   3345678899999999999984321    


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..+..++.||+.||.|||++||+||||||+|||++.++             
T Consensus        99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~-------------  165 (362)
T 2bdw_A           99 EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA-------------  165 (362)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS-------------
T ss_pred             eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC-------------
Confidence                                   23478999999999999999999999999999999999997543             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                 ....+||+|||++.......  ....||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+
T Consensus       166 -----------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~  234 (362)
T 2bdw_A          166 -----------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  234 (362)
T ss_dssp             -----------TTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence                       23458888888886654332  23589999999999999899999999999999999999999999887


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+....+.......|.                                              ..+..+++++.+||.+|
T Consensus       235 ~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~  268 (362)
T 2bdw_A          235 QHRLYAQIKAGAYDYPS----------------------------------------------PEWDTVTPEAKSLIDSM  268 (362)
T ss_dssp             HHHHHHHHHHTCCCCCT----------------------------------------------TGGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHH
Confidence            76666555442221111                                              11134567899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      |+.||++|||+.|+|+||||+.
T Consensus       269 L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          269 LTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             SCSSGGGSCCHHHHTTSHHHHT
T ss_pred             cCCChhhCcCHHHHhcCcccCC
Confidence            9999999999999999999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.1e-44  Score=348.72  Aligned_cols=263  Identities=30%  Similarity=0.526  Sum_probs=202.5

Q ss_pred             EeeCCcc--CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----
Q 015532           84 FAIGENL--TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----  154 (405)
Q Consensus        84 ~~~~~~~--~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----  154 (405)
                      +..|+.+  .++|++++.||+|+||.||+|++..+++.||||++...  ....+.+.+|+++++.+.|+++....     
T Consensus        17 ~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~   96 (364)
T 3qyz_A           17 MVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRA   96 (364)
T ss_dssp             BCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECC
T ss_pred             EEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEec
Confidence            3445544  47999999999999999999999999999999999643  23346788999999999999985421     


Q ss_pred             -------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          155 -------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 -------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++.          
T Consensus        97 ~~~~~~~~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~----------  166 (364)
T 3qyz_A           97 PTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----------  166 (364)
T ss_dssp             SSTTTCCCEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC----------
T ss_pred             CCccccceEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCC----------
Confidence                                     134788999999999999999999999999999999999976554          


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~  282 (405)
                                       +||+|||++......      ....+||+.|+|||++.+. .++.++|||||||++|+|++|.
T Consensus       167 -----------------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  229 (364)
T 3qyz_A          167 -----------------LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR  229 (364)
T ss_dssp             -----------------EEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             -----------------EEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCC
Confidence                             566666666443221      1235799999999987654 5899999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhh-HHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      +||.+.+..+.+..+...++.++........... ..+....     +..               ............+++
T Consensus       230 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~~~~~  289 (364)
T 3qyz_A          230 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL-----PHK---------------NKVPWNRLFPNADSK  289 (364)
T ss_dssp             CSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS-----CCC---------------CCCCHHHHCTTSCHH
T ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhc-----CCc---------------cCCCHHHhCCCCCHH
Confidence            9999999999999999999988876554321111 1111100     000               000011222456778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +.+||.+||++||++|||++|+|+||||++..
T Consensus       290 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          290 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            99999999999999999999999999999863

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.9e-45  Score=345.97  Aligned_cols=237  Identities=26%  Similarity=0.416  Sum_probs=194.2

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-------hhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      +.+.++|++.+.||+|+||.||+|++..+++.||||+++....       ..+.+.+|+.+|+.+.|+++....      
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   86 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   86 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            3456789999999999999999999999999999999964321       356788999999999999984321      


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++.              
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~--------------  152 (326)
T 2y0a_A           87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV--------------  152 (326)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS--------------
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCC--------------
Confidence                                 235789999999999999999999999999999999999976541              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                               ....+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       153 ---------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  223 (326)
T 2y0a_A          153 ---------PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ  223 (326)
T ss_dssp             ---------SSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ---------CCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH
Confidence                     2235788888888654322  23457999999999999889999999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +.+..+.......+..                                              .....+..+.+||.+||+
T Consensus       224 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~li~~~L~  257 (326)
T 2y0a_A          224 ETLANVSAVNYEFEDE----------------------------------------------YFSNTSALAKDFIRRLLV  257 (326)
T ss_dssp             HHHHHHHHTCCCCCHH----------------------------------------------HHTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHhcCCCcCcc----------------------------------------------ccccCCHHHHHHHHHHcc
Confidence            7666655433332221                                              113446789999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .||++|||++|+|+||||+...
T Consensus       258 ~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          258 KDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             SSGGGSCCHHHHHHSTTTSCCS
T ss_pred             CChhhCCCHHHHhcCCCccCCc
Confidence            9999999999999999998754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3.9e-45  Score=360.04  Aligned_cols=234  Identities=26%  Similarity=0.410  Sum_probs=191.6

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..+.++|++.+.||+|+||+||+|.+..+++.||+|++....   ...+.+.+|+.+++.+.|+++....          
T Consensus         7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   86 (444)
T 3soa_A            7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY   86 (444)
T ss_dssp             CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred             ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence            456678999999999999999999999999999999996532   3446678999999999999985421          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.+.                   
T Consensus        87 lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~-------------------  147 (444)
T 3soa_A           87 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL-------------------  147 (444)
T ss_dssp             EEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS-------------------
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC-------------------
Confidence                             24578999999999999999999999999999999999997532                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                           .+..+||+|||++.......   ....||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+..
T Consensus       148 -----~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~  222 (444)
T 3soa_A          148 -----KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY  222 (444)
T ss_dssp             -----TTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             -----CCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence                 23468888888886554332   2357999999999999989999999999999999999999999988877776


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.......|.                                              ..+..+++++.+||.+||+.||
T Consensus       223 ~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~dP  256 (444)
T 3soa_A          223 QQIKAGAYDFPS----------------------------------------------PEWDTVTPEAKDLINKMLTINP  256 (444)
T ss_dssp             HHHHHTCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHHSCSST
T ss_pred             HHHHhCCCCCCc----------------------------------------------cccccCCHHHHHHHHHHcCCCh
Confidence            666543222211                                              1123457789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCC
Q 015532          375 AERLKAREALRHPFFTR  391 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~  391 (405)
                      ++|||+.|+|+||||+.
T Consensus       257 ~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          257 SKRITAAEALKHPWISH  273 (444)
T ss_dssp             TTSCCHHHHHHSCTTHH
T ss_pred             hHCCCHHHHhcCccccC
Confidence            99999999999999975

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.9e-45  Score=355.08  Aligned_cols=279  Identities=28%  Similarity=0.449  Sum_probs=202.7

Q ss_pred             CCCceEeeCC---ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCC
Q 015532           79 DGHYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGG  152 (405)
Q Consensus        79 ~~~~~~~~~~---~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~  152 (405)
                      .+++++..|+   .+.++|++.+.||+|+||.||+|++..+++.||||++...   ....+.+.+|+.+++.+.|+++..
T Consensus         9 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~   88 (371)
T 2xrw_A            9 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG   88 (371)
T ss_dssp             GGEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CcceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccc
Confidence            3456677776   3568999999999999999999999999999999999642   234466788999999999998843


Q ss_pred             Cc------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccccc
Q 015532          153 TR------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       153 ~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~  202 (405)
                      ..                              ...+++..+..++.||+.||.|||++||+||||||+|||++.++    
T Consensus        89 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~----  164 (371)
T 2xrw_A           89 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC----  164 (371)
T ss_dssp             EEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS----
T ss_pred             eEEeeccccccccccceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC----
Confidence            21                              12468889999999999999999999999999999999997655    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                                             .+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       165 -----------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  221 (371)
T 2xrw_A          165 -----------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK  221 (371)
T ss_dssp             -----------------------CEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             -----------------------CEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHh
Confidence                                   4666677766544322  233579999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+.+..+.+..+.+.++.++..+..........+..........       ...........+. ........+.
T Consensus       222 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~  293 (371)
T 2xrw_A          222 GGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY-------SFEKLFPDVLFPA-DSEHNKLKAS  293 (371)
T ss_dssp             SSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCC-------CHHHHSCGGGSCC-SSHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcccccc-------chhhhcccccCcc-cccccccccH
Confidence            9999999999998888888888877766655444444433322111100       0000000000000 0000112256


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ++++||.+||++||++|||++|+|+||||+..
T Consensus       294 ~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          294 QARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            89999999999999999999999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-45  Score=346.33  Aligned_cols=224  Identities=25%  Similarity=0.371  Sum_probs=187.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.||||++++..    ...+.+.+|+.+++.+.|+++....             
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            57999999999999999999999999999999997532    2346677899999999999884321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.+|                      
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g----------------------  143 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG----------------------  143 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS----------------------
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCC----------------------
Confidence                          24578999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus       144 -----~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  218 (318)
T 1fot_A          144 -----HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA  218 (318)
T ss_dssp             -----CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC
T ss_pred             -----CEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence                 467777777765555555578999999999999999999999999999999999999999987776665555432


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC--
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL--  378 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp--  378 (405)
                      ....                                                  +...++++.+||.+||+.||++|+  
T Consensus       219 ~~~~--------------------------------------------------p~~~~~~~~~li~~lL~~dp~~R~~~  248 (318)
T 1fot_A          219 ELRF--------------------------------------------------PPFFNEDVKDLLSRLITRDLSQRLGN  248 (318)
T ss_dssp             CCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSCTTTCTTS
T ss_pred             CCCC--------------------------------------------------CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            1111                                                  123467899999999999999999  


Q ss_pred             ---CHHHHHcCCCCCCC
Q 015532          379 ---KAREALRHPFFTRD  392 (405)
Q Consensus       379 ---ta~elL~hp~f~~~  392 (405)
                         +++|+++||||++-
T Consensus       249 ~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          249 LQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             STTTTHHHHTSGGGSSC
T ss_pred             cCCCHHHHhcCccccCC
Confidence               99999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3e-45  Score=348.64  Aligned_cols=224  Identities=25%  Similarity=0.398  Sum_probs=183.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++++.||+|+||+||+|+++.+++.||||++++.    ....+.+.+|+.+|+.+.|+++....             
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5799999999999999999999999999999999753    23345678899999999999884321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                     
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~---------------------  143 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH---------------------  143 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC---------------------
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCC---------------------
Confidence                          235789999999999999999999999999999999999987664                     


Q ss_pred             CCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                            +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+
T Consensus       144 ------vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  217 (337)
T 1o6l_A          144 ------IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI  217 (337)
T ss_dssp             ------EEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             ------EEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH
Confidence                  5555555554321   1223468999999999999989999999999999999999999999887766655544


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......                                                  .+..+++++.+||.+||+.||++|
T Consensus       218 ~~~~~~--------------------------------------------------~p~~~s~~~~~li~~lL~~dP~~R  247 (337)
T 1o6l_A          218 LMEEIR--------------------------------------------------FPRTLSPEAKSLLAGLLKKDPKQR  247 (337)
T ss_dssp             HHCCCC--------------------------------------------------CCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             HcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhhcCHHHh
Confidence            331111                                                  112356789999999999999999


Q ss_pred             C-----CHHHHHcCCCCCCC
Q 015532          378 L-----KAREALRHPFFTRD  392 (405)
Q Consensus       378 p-----ta~elL~hp~f~~~  392 (405)
                      |     +++|+++||||+.-
T Consensus       248 ~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          248 LGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TTCSTTTHHHHHTSGGGTTC
T ss_pred             cCCCCCCHHHHHcCCCcCCC
Confidence            9     99999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=5.6e-45  Score=341.08  Aligned_cols=231  Identities=26%  Similarity=0.387  Sum_probs=187.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ..++|++.+.||+|+||+||+|++..+++.||||++.... ...+.+.+|+.+++.+.|+++....              
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            3568999999999999999999999999999999986433 3456678999999999999985422              


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+|||++.++                        
T Consensus        98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~------------------------  153 (297)
T 3fxz_A           98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG------------------------  153 (297)
T ss_dssp             CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC------------------------
T ss_pred             CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCC------------------------
Confidence                        13478899999999999999999999999999999999997655                        


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                         .+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+..
T Consensus       154 ---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  230 (297)
T 3fxz_A          154 ---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT  230 (297)
T ss_dssp             ---CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             ---CEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence               4566666665443322   2335799999999999999999999999999999999999999988777665554432


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ...+.                                               ......++..+.+||.+||+.||++|||
T Consensus       231 ~~~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps  263 (297)
T 3fxz_A          231 NGTPE-----------------------------------------------LQNPEKLSAIFRDFLNRCLEMDVEKRGS  263 (297)
T ss_dssp             HCSCC-----------------------------------------------CSCGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCC-----------------------------------------------CCCccccCHHHHHHHHHHccCChhHCcC
Confidence            21100                                               0112345678999999999999999999


Q ss_pred             HHHHHcCCCCCCCCC
Q 015532          380 AREALRHPFFTRDVR  394 (405)
Q Consensus       380 a~elL~hp~f~~~~~  394 (405)
                      ++|+|+||||+....
T Consensus       264 ~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          264 AKELLQHQFLKIAKP  278 (297)
T ss_dssp             HHHHTTCGGGGGCCC
T ss_pred             HHHHhhChhhcccCc
Confidence            999999999997643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=4.8e-45  Score=339.81  Aligned_cols=252  Identities=29%  Similarity=0.473  Sum_probs=188.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++++.||+|+||+||+|++ .+++.||||+++...   ...+.+.+|+.+++.+.|+++....              
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            5799999999999999999998 678899999996432   2346778999999999999984321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                      
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~----------------------  138 (288)
T 1ob3_A           81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE----------------------  138 (288)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC----------------------
T ss_pred             ecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC----------------------
Confidence                         245788999999999999999999999999999999999976654                      


Q ss_pred             CCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           +||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+
T Consensus       139 -----~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~  213 (288)
T 1ob3_A          139 -----LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI  213 (288)
T ss_dssp             -----EEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             -----EEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                 55556665543221   11234789999999999864 5899999999999999999999999999888888888


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+..+..+...+...... ..+     ...+..               ..+..........++++.+||.+||+.||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  272 (288)
T 1ob3_A          214 FRILGTPNSKNWPNVTEL-PKY-----DPNFTV---------------YEPLPWESFLKGLDESGIDLLSKMLKLDPNQR  272 (288)
T ss_dssp             HHHHCCCCTTTSTTGGGS-TTC-----CTTCCC---------------CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHCCCChhhchhhhcc-ccc-----cccccc---------------ccCccHHHHhhhcCHHHHHHHHHHcCCCcccC
Confidence            887776543211100000 000     000000               00000112234567899999999999999999


Q ss_pred             CCHHHHHcCCCCCCC
Q 015532          378 LKAREALRHPFFTRD  392 (405)
Q Consensus       378 pta~elL~hp~f~~~  392 (405)
                      ||++|+|+||||++.
T Consensus       273 pt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          273 ITAKQALEHAYFKEN  287 (288)
T ss_dssp             CCHHHHHTSGGGGC-
T ss_pred             CCHHHHhcCcchhhc
Confidence            999999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.2e-45  Score=350.72  Aligned_cols=265  Identities=29%  Similarity=0.485  Sum_probs=193.9

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ..++|++.++||+|+||+||+|++..+++.||||+++...   ...+.+.+|+.+++.+.|+++....            
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            3568999999999999999999999999999999996432   2235567899999999999985421            


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                     
T Consensus       112 ~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~---------------------  170 (329)
T 3gbz_A          112 FEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDA---------------------  170 (329)
T ss_dssp             EECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC------------------------
T ss_pred             EecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCC---------------------
Confidence                          235789999999999999999999999999999999999965431                     


Q ss_pred             CCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                       +....+||+|||++......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+....+.+..
T Consensus       171 -~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  249 (329)
T 3gbz_A          171 -SETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK  249 (329)
T ss_dssp             ---CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             -CccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHH
Confidence             13445788888887654322   2335789999999999875 489999999999999999999999999999998888


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....+.++.........          ...|......          ..............++++.+||.+||++||++
T Consensus       250 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  309 (329)
T 3gbz_A          250 IFEVLGLPDDTTWPGVTA----------LPDWKQSFPK----------FRGKTLKRVLGALLDDEGLDLLTAMLEMDPVK  309 (329)
T ss_dssp             HHHHHCCCCTTTSTTGGG----------STTCCTTCCC----------CCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHhCCCchhhhhhhhh----------hhhhhhhhhh----------hccccHhhhcccccCHHHHHHHHHHccCChhh
Confidence            888877665432111000          0001000000          00000011111235678999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~~~  396 (405)
                      |||++|+|+||||++....|
T Consensus       310 R~t~~e~l~hp~f~~~~~~P  329 (329)
T 3gbz_A          310 RISAKNALEHPYFSHNDFDP  329 (329)
T ss_dssp             SCCHHHHHTSGGGSSSCSCC
T ss_pred             CCCHHHHhCCcccCCCCCCC
Confidence            99999999999999876554

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=4.6e-45  Score=357.93  Aligned_cols=250  Identities=29%  Similarity=0.492  Sum_probs=195.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      .+|++.+.||+|+||+||+|++..+++.||||++.....   ...+|+++|+.+.|++++...                 
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            469999999999999999999999999999999865332   234699999999999985421                 


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++.++                 
T Consensus       131 v~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~-----------------  193 (420)
T 1j1b_A          131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT-----------------  193 (420)
T ss_dssp             EEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT-----------------
T ss_pred             ehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC-----------------
Confidence                               13467888999999999999999999999999999999997532                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                               ..+||+|||+++....  .....+||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.+..+
T Consensus       194 ---------~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~  264 (420)
T 1j1b_A          194 ---------AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD  264 (420)
T ss_dssp             ---------TEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ---------CeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     2467777777764332  22345789999999999875 69999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+.+.+|.++...+......       .....++....              ...........++++.+||.+||++
T Consensus       265 ~l~~i~~~lg~p~~~~~~~~~~~-------~~~~~~p~~~~--------------~~~~~~~~~~~~~~~~~Li~~~L~~  323 (420)
T 1j1b_A          265 QLVEIIKVLGTPTREQIREMNPN-------YTEFKFPQIKA--------------HPWTKVFRPRTPPEAIALCSRLLEY  323 (420)
T ss_dssp             HHHHHHHHHCSCCHHHHHHHCSC-------CCCCCCCCCCC--------------CCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHhCCCCHHHHHhhChh-------hhhhccCccCC--------------CCHHHhcCCCCCHHHHHHHHHhccC
Confidence            99999999998876654332110       01111111000              0000111234577899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTR  391 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~  391 (405)
                      ||++|||+.|+|+||||+.
T Consensus       324 dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          324 TPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             SGGGSCCHHHHHTSGGGGG
T ss_pred             ChhHCCCHHHHhCCHhhcc
Confidence            9999999999999999975

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.5e-45  Score=347.69  Aligned_cols=256  Identities=29%  Similarity=0.473  Sum_probs=190.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhh--hHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|+++++||+|+||+||+|++..+++.||||+++.....  ...+.+|+.+++.+.|+++....               
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            5799999999999999999999999999999999653321  12345799999999999885421               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                       
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~-----------------------  138 (324)
T 3mtl_A           82 LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE-----------------------  138 (324)
T ss_dssp             CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCC-----------------------
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCC-----------------------
Confidence                        134788999999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          +||+|||++......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.
T Consensus       139 ----~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  214 (324)
T 3mtl_A          139 ----LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIF  214 (324)
T ss_dssp             ----EEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ----EEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                555666655433221   123478999999999987 468999999999999999999999999999999999999


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +.++.++...+........ +.    ...++.               ............+++++.+||.+||++||++||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~-~~----~~~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  274 (324)
T 3mtl_A          215 RILGTPTEETWPGILSNEE-FK----TYNYPK---------------YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI  274 (324)
T ss_dssp             HHHCCCCTTTSTTGGGCHH-HH----HTCCCC---------------CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHhCCCChHhchhhhcchh-hc----cccccc---------------ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCC
Confidence            9888776543221110000 00    000000               001111222345678999999999999999999


Q ss_pred             CHHHHHcCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 ta~elL~hp~f~~~~~  394 (405)
                      |++|+|+||||++...
T Consensus       275 t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          275 SAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CHHHHTTSGGGGGGCS
T ss_pred             CHHHHhcChhhhhccc
Confidence            9999999999987544

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=5.1e-45  Score=348.96  Aligned_cols=224  Identities=26%  Similarity=0.395  Sum_probs=188.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++++.||+|+||.||+|++..+++.||||++++..    ...+.+.+|+.+|+.+.|+++....             
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            67999999999999999999999999999999996532    2346678899999999999874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.+|                      
T Consensus       121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g----------------------  178 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----------------------  178 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS----------------------
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC----------------------
Confidence                          14578999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus       179 -----~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  253 (350)
T 1rdq_E          179 -----YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG  253 (350)
T ss_dssp             -----CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             -----CEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC
Confidence                 467777777766555555678999999999999999999999999999999999999999988776666555432


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC-
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK-  379 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt-  379 (405)
                      ...+                                                  +..++..+.+||.+||+.||++||+ 
T Consensus       254 ~~~~--------------------------------------------------p~~~~~~~~~li~~lL~~dp~~R~~~  283 (350)
T 1rdq_E          254 KVRF--------------------------------------------------PSHFSSDLKDLLRNLLQVDLTKRFGN  283 (350)
T ss_dssp             CCCC--------------------------------------------------CTTCCHHHHHHHHHHSCSCTTTCTTS
T ss_pred             CCCC--------------------------------------------------CCCCCHHHHHHHHHHhhcCHHhccCC
Confidence            1111                                                  1234678999999999999999998 


Q ss_pred             ----HHHHHcCCCCCCC
Q 015532          380 ----AREALRHPFFTRD  392 (405)
Q Consensus       380 ----a~elL~hp~f~~~  392 (405)
                          ++|+++||||+..
T Consensus       284 ~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          284 LKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             STTTTHHHHTSGGGTTC
T ss_pred             ccCCHHHHHhCcCcCCC
Confidence                9999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=3.8e-45  Score=350.22  Aligned_cols=232  Identities=28%  Similarity=0.407  Sum_probs=186.0

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      +.++|++.+.||+|+||+||+|+++.+++.||||+++...      ...+.+.+|+.+++.+.|+++....         
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  101 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML  101 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            4578999999999999999999999999999999996432      1356788999999999999984321         


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...+++..++.++.||+.||.|||++||+||||||+|||++.++              
T Consensus       102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~--------------  167 (351)
T 3c0i_A          102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE--------------  167 (351)
T ss_dssp             EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS--------------
T ss_pred             EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC--------------
Confidence                                  11378899999999999999999999999999999999997643              


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                ....+||+|||++.......   ...+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus       168 ----------~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  237 (351)
T 3c0i_A          168 ----------NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK  237 (351)
T ss_dssp             ----------TTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH
T ss_pred             ----------CCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH
Confidence                      23357888888886554332   23579999999999999899999999999999999999999998743


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                       .+....+.......+.                                              ..+..++.++.+||.+|
T Consensus       238 -~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~  270 (351)
T 3c0i_A          238 -ERLFEGIIKGKYKMNP----------------------------------------------RQWSHISESAKDLVRRM  270 (351)
T ss_dssp             -HHHHHHHHHTCCCCCH----------------------------------------------HHHTTSCHHHHHHHHHH
T ss_pred             -HHHHHHHHcCCCCCCc----------------------------------------------cccccCCHHHHHHHHHH
Confidence             3333333221111110                                              11134577899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      |+.||++|||+.|+|+||||+..
T Consensus       271 L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          271 LMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             TCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             CCCChhHCcCHHHHhcChhhcCC
Confidence            99999999999999999999863

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=6.2e-45  Score=347.50  Aligned_cols=225  Identities=25%  Similarity=0.371  Sum_probs=183.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc-----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR-----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~-----------  154 (405)
                      .++|++.+.||+|+||.||+|+++.+++.||||++++..    ...+....|..++..+ .|+++....           
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            367999999999999999999999999999999997532    3345677899999987 788774321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                   
T Consensus        96 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~-------------------  156 (345)
T 1xjd_A           96 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH-------------------  156 (345)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-------------------
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCC-------------------
Confidence                            145789999999999999999999999999999999999977664                   


Q ss_pred             cCCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       157 --------vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  228 (345)
T 1xjd_A          157 --------IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH  228 (345)
T ss_dssp             --------EEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --------EEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence                    5555666554321   12234689999999999999999999999999999999999999999887766665


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.......                                                  +...++++.+||.+||+.||+
T Consensus       229 ~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~lL~~dp~  258 (345)
T 1xjd_A          229 SIRMDNPFY--------------------------------------------------PRWLEKEAKDLLVKLFVREPE  258 (345)
T ss_dssp             HHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHSCSSGG
T ss_pred             HHHhCCCCC--------------------------------------------------CcccCHHHHHHHHHHhcCCHh
Confidence            553321111                                                  123467899999999999999


Q ss_pred             CCCCHH-HHHcCCCCCCC
Q 015532          376 ERLKAR-EALRHPFFTRD  392 (405)
Q Consensus       376 ~Rpta~-elL~hp~f~~~  392 (405)
                      +||++. ++++||||+.-
T Consensus       259 ~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          259 KRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             GSBTTBSCGGGSGGGTTC
T ss_pred             HcCCChHHHHcCccccCC
Confidence            999998 99999999864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.5e-44  Score=335.57  Aligned_cols=257  Identities=31%  Similarity=0.571  Sum_probs=194.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.++||+|+||+||+|++..+++.||||++....   ...+.+.+|+.+++.+.|+++....             
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            468999999999999999999999999999999985432   2346677899999999999985421             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.++                      
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~----------------------  139 (311)
T 4agu_A           82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS----------------------  139 (311)
T ss_dssp             ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS----------------------
T ss_pred             EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC----------------------
Confidence                          24578999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                           .++|+|||++......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+.+..
T Consensus       140 -----~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  214 (311)
T 4agu_A          140 -----VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYL  214 (311)
T ss_dssp             -----CEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             -----CEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                 4677777776544322   123578999999999987 5689999999999999999999999999999999999


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+..+..+..........  .++. +.....+....                ........++..+.+||.+||++||++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~----------------~~~~~~~~~~~~~~~li~~~L~~dP~~  275 (311)
T 4agu_A          215 IRKTLGDLIPRHQQVFSTN--QYFS-GVKIPDPEDME----------------PLELKFPNISYPALGLLKGCLHMDPTE  275 (311)
T ss_dssp             HHHHHCSCCHHHHHHHHTC--GGGT-TCCCCCCSSCC----------------CHHHHCTTCCHHHHHHHHHHCCSSTTT
T ss_pred             HHHHhcccccccccccccc--cccc-cCcCCCccccc----------------hhhhhcccccHHHHHHHHHHccCChhh
Confidence            9888888776543322111  1110 11111110000                001112356778999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDV  393 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~  393 (405)
                      |||++|+|+||||++-.
T Consensus       276 Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          276 RLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             SCCHHHHHTSGGGTTCC
T ss_pred             cCCHHHHhcChHHHhcc
Confidence            99999999999999754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-44  Score=348.47  Aligned_cols=235  Identities=26%  Similarity=0.435  Sum_probs=192.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+|+.+.|+++....              
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            4578999999999999999999999999999999996532 3345678899999999999884321              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.+                       
T Consensus       129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-----------------------  185 (387)
T 1kob_A          129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-----------------------  185 (387)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-----------------------
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-----------------------
Confidence                          1357899999999999999999999999999999999999642                       


Q ss_pred             CCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                        ....+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.
T Consensus       186 --~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~  263 (387)
T 1kob_A          186 --KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK  263 (387)
T ss_dssp             --TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred             --CCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence              23457888888887654332  33579999999999999899999999999999999999999999887766665554


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ......+                                              ......+++++.+||.+||+.||++||
T Consensus       264 ~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~L~~dP~~Rp  297 (387)
T 1kob_A          264 RCDWEFD----------------------------------------------EDAFSSVSPEAKDFIKNLLQKEPRKRL  297 (387)
T ss_dssp             HCCCCCC----------------------------------------------SSTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             hCCCCCC----------------------------------------------ccccccCCHHHHHHHHHHcCCChhHCc
Confidence            3211111                                              011234577899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVRR  395 (405)
Q Consensus       379 ta~elL~hp~f~~~~~~  395 (405)
                      |+.|+|+||||++....
T Consensus       298 t~~ell~hp~~~~~~~~  314 (387)
T 1kob_A          298 TVHDALEHPWLKGDHSN  314 (387)
T ss_dssp             CHHHHHTSTTTSSCCTT
T ss_pred             CHHHHhhCccccCCccc
Confidence            99999999999986543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=8.5e-45  Score=342.94  Aligned_cols=261  Identities=31%  Similarity=0.535  Sum_probs=183.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++++.||+|+||+||+|.+..+++.||||+++...  ...+.+.+|+.+++.+.|+++....              
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            357999999999999999999999999999999996432  2346788999999999999984321              


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                 
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~-----------------  146 (317)
T 2pmi_A           84 FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ-----------------  146 (317)
T ss_dssp             CCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC-----------------
T ss_pred             ecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCC-----------------
Confidence                              124788999999999999999999999999999999999976654                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                                +||+|||++......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+
T Consensus       147 ----------~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  216 (317)
T 2pmi_A          147 ----------LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE  216 (317)
T ss_dssp             ----------EEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ----------EEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                      566666665443221   2234789999999999874 68999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+....+.++...+...... ..+     ......  .........        .........+.++.+||.+||+.
T Consensus       217 ~~~~i~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~l~~li~~~L~~  280 (317)
T 2pmi_A          217 QLKLIFDIMGTPNESLWPSVTKL-PKY-----NPNIQQ--RPPRDLRQV--------LQPHTKEPLDGNLMDFLHGLLQL  280 (317)
T ss_dssp             HHHHHHHHHCSCCTTTCGGGGGC-TTC-----CTTCCC--CCCCCSHHH--------HGGGCSSCCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHhCCCChhHhhhhhhh-hhc-----cccccc--ccchhHHHh--------hcccccccCCHHHHHHHHHHCCC
Confidence            99999888887665432221100 000     000000  000000000        01112235678999999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      ||++|||++|+|+||||++...
T Consensus       281 dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          281 NPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             SGGGSCCHHHHTTSGGGGGGCC
T ss_pred             CcccCCCHHHHhCChhhhcccc
Confidence            9999999999999999987543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-44  Score=350.61  Aligned_cols=253  Identities=32%  Similarity=0.560  Sum_probs=196.6

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ...++|++.+.||+|+||+||+|++..+++.||||++......   ..+|+++++.+.|+++....              
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            3457899999999999999999999999999999998654332   33699999999999874310              


Q ss_pred             ------------------------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHC
Q 015532          155 ------------------------------------------------------YRSFPIDLVRELGRQLLESVAFMHEL  180 (405)
Q Consensus       155 ------------------------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~  180 (405)
                                                                            ...+++..++.++.||+.||.|||++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  160 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL  160 (383)
T ss_dssp             -----------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence                                                                  13477889999999999999999999


Q ss_pred             CcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHh
Q 015532          181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVIL  258 (405)
Q Consensus       181 givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~  258 (405)
                      ||+||||||+|||++.                          .+..+||+|||++.....  ......||+.|+|||++.
T Consensus       161 gi~H~Dikp~Nil~~~--------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~  214 (383)
T 3eb0_A          161 GICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELML  214 (383)
T ss_dssp             TEECSCCCGGGEEEET--------------------------TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHT
T ss_pred             cCccCccCHHHEEEcC--------------------------CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhc
Confidence            9999999999999973                          123567777777764432  223457899999999998


Q ss_pred             CCC-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhh
Q 015532          259 GLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS  337 (405)
Q Consensus       259 ~~~-~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (405)
                      +.. ++.++|||||||++|+|++|.+||.+.+..+.+..+.+.+|.++...+........       ...++....    
T Consensus       215 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~-------~~~~~~~~~----  283 (383)
T 3eb0_A          215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYT-------EVRFPTLKA----  283 (383)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC---------CCCCCCCC----
T ss_pred             CCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccc-------cccCCccCc----
Confidence            754 89999999999999999999999999999999999999999988765544321111       111111100    


Q ss_pred             HHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                                ...........++++.+||.+||++||++|||+.|+|+||||++
T Consensus       284 ----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          284 ----------KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             ----------CCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             ----------ccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                      01111223456788999999999999999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=8e-44  Score=341.24  Aligned_cols=257  Identities=30%  Similarity=0.512  Sum_probs=199.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +.++|.+.+.||+|+||.||+|++..+|+.||||++...   ....+.+.+|+.+++.+.|+++....            
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            457899999999999999999999999999999999643   23346678899999999999884321            


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.++                  
T Consensus       102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~------------------  163 (353)
T 3coi_A          102 YDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC------------------  163 (353)
T ss_dssp             CCCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTC------------------
T ss_pred             eeEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCC------------------
Confidence                              12478999999999999999999999999999999999997654                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                               .+||+|||++...........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus       164 ---------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  234 (353)
T 3coi_A          164 ---------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT  234 (353)
T ss_dssp             ---------CEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH
T ss_pred             ---------cEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                     4677777777665544455688999999999987 578999999999999999999999999999999999


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.+..|.++..+...........+....    +.               .............++.+.+||.+||+.||+
T Consensus       235 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---------------~~~~~~~~~~~~~~~~~~~li~~~L~~dp~  295 (353)
T 3coi_A          235 QILKVTGVPGTEFVQKLNDKAAKSYIQSL----PQ---------------TPRKDFTQLFPRASPQAADLLEKMLELDVD  295 (353)
T ss_dssp             HHHHHHCBCCHHHHTTCSCHHHHHHHHTS----CB---------------CSSCCTTTTCTTSCHHHHHHHHHHSCSCTT
T ss_pred             HHHHHhCCCCHHHHHHHhhHHHHHHHHhC----cC---------------CCCccHHHhcCCcCHHHHHHHHHHcCCCcc
Confidence            99999998887665433222111110000    00               000001112235678999999999999999


Q ss_pred             CCCCHHHHHcCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRD  392 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~  392 (405)
                      +|||++|+|+||||+..
T Consensus       296 ~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          296 KRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             TSCCHHHHHTSGGGTTT
T ss_pred             cCCCHHHHhcCcchhhc
Confidence            99999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.8e-44  Score=348.52  Aligned_cols=224  Identities=23%  Similarity=0.402  Sum_probs=176.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------  154 (405)
                      ++|+++++||+|+||+||+|+++.+++.||||++++..    ...+.+..|..++.++ .|++++...            
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            57999999999999999999999999999999997542    2234567899999888 788774321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.                    
T Consensus       132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~--------------------  191 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--------------------  191 (396)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--------------------
T ss_pred             EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCC--------------------
Confidence                           245899999999999999999999999999999999999977664                    


Q ss_pred             CCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH----
Q 015532          220 NLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE----  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~----  292 (405)
                             +||+|||+++...   ......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||......+    
T Consensus       192 -------ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~  264 (396)
T 4dc2_A          192 -------IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ  264 (396)
T ss_dssp             -------EEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------
T ss_pred             -------EEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch
Confidence                   5666666654311   22334689999999999999999999999999999999999999996532211    


Q ss_pred             -----HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          293 -----HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       293 -----~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                           ....+...                        .                          ...+..++.++.+||.
T Consensus       265 ~~~~~~~~~i~~~------------------------~--------------------------~~~p~~~s~~~~~li~  294 (396)
T 4dc2_A          265 NTEDYLFQVILEK------------------------Q--------------------------IRIPRSLSVKAASVLK  294 (396)
T ss_dssp             CCHHHHHHHHHHC------------------------C--------------------------CCCCTTSCHHHHHHHH
T ss_pred             hhHHHHHHHHhcc------------------------c--------------------------cCCCCcCCHHHHHHHH
Confidence                 11111110                        0                          1122345778999999


Q ss_pred             HccccCCCCCCCH------HHHHcCCCCCCC
Q 015532          368 GLLRYDPAERLKA------REALRHPFFTRD  392 (405)
Q Consensus       368 ~~L~~dP~~Rpta------~elL~hp~f~~~  392 (405)
                      +||+.||++|+++      +|+++||||++-
T Consensus       295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             HHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            9999999999985      899999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.6e-45  Score=343.66  Aligned_cols=168  Identities=23%  Similarity=0.245  Sum_probs=131.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ..+|.+.++||+|+||+||+|++  +|+.||||+++...........|+..+..++|+|++...                
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            35699999999999999999987  488999999976544333444566677789999985421                


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHC--------CcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~--------givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                    ...+++..+..++.|++.||.|||++        +||||||||+|||++.++              
T Consensus        80 ~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~--------------  145 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--------------  145 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTS--------------
T ss_pred             ecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCC--------------
Confidence                          13568889999999999999999987        999999999999997665              


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCc-------cceecCCCcchhHHHhCC------CCCCchhHHHHHHHHHHHH
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGL------GWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~~ll  279 (405)
                                   .+||+|||+|+......       ...+||+.|||||++.+.      .|+.++|||||||++|||+
T Consensus       146 -------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~  212 (303)
T 3hmm_A          146 -------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA  212 (303)
T ss_dssp             -------------CEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------CEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHH
Confidence                         45666666665432221       235799999999999864      3677999999999999999


Q ss_pred             hCCCCCCC
Q 015532          280 SGEALFQT  287 (405)
Q Consensus       280 tg~~pf~~  287 (405)
                      ||.+||..
T Consensus       213 tg~~~~~~  220 (303)
T 3hmm_A          213 RRCSIGGI  220 (303)
T ss_dssp             HTBCBTTB
T ss_pred             HCCCCCCc
Confidence            99888754

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.3e-44  Score=351.77  Aligned_cols=254  Identities=31%  Similarity=0.532  Sum_probs=196.3

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++....+|++.+.||+|+||+||+|++..+++ ||+|++......   ..+|+++++.+.|+++....            
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~  110 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE  110 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch---HHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence            34455689999999999999999999987776 888877543322   23699999999999985421            


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe-cccccccCCccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPDYKFLS  209 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~-~~~~~k~~df~~~~  209 (405)
                                              ...+++..++.++.||+.||.|||++||+||||||+|||++ .++           
T Consensus       111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~-----------  179 (394)
T 4e7w_A          111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG-----------  179 (394)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT-----------
T ss_pred             eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCC-----------
Confidence                                    23578889999999999999999999999999999999997 444           


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                      .+||+|||++.....  ......||+.|+|||++.+. .|+.++|||||||++|+|++|++||.
T Consensus       180 ----------------~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  243 (394)
T 4e7w_A          180 ----------------VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP  243 (394)
T ss_dssp             ----------------EEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ----------------cEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                            467777777754322  22345789999999999875 58999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +.+..+.+..+.+.+|.++...+........       ...++...              ............++++.+||
T Consensus       244 ~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~-------~~~~~~~~--------------~~~~~~~~~~~~~~~~~~li  302 (394)
T 4e7w_A          244 GESGIDQLVEIIKVLGTPSREQIKTMNPNYM-------EHKFPQIR--------------PHPFSKVFRPRTPPDAIDLI  302 (394)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS-------SSCCCCCC--------------CCCHHHHSCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHHhhChhhh-------hhcccccc--------------CCcHHHhccccCCHHHHHHH
Confidence            9999999999999999988765543321110       01111100              00011112234678999999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      .+||++||++|||+.|+|+||||++-
T Consensus       303 ~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          303 SRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HHHhCCChhhCCCHHHHhcChhhhhh
Confidence            99999999999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.2e-44  Score=347.93  Aligned_cols=233  Identities=28%  Similarity=0.412  Sum_probs=176.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.+.||+|+||+||+|++..+++.||||++.......+.+.+|+.+++.+.|+++....                
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            4689999999999999999999999999999999987666667788999999999999985421                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||.|||++||+||||||+|||++.++                         
T Consensus        99 ~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~-------------------------  153 (361)
T 3uc3_A           99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP-------------------------  153 (361)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSS-------------------------
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-------------------------
Confidence                       24578999999999999999999999999999999999997543                         


Q ss_pred             CCCceeccCCCCcccc--CCccceecCCCcchhHHHhCCCCCCc-hhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHH
Q 015532          224 SSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHLAM-MER  299 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~~lltg~~pf~~~~~~~~~~~-i~~  299 (405)
                      ...+||+|||++....  ......+||+.|+|||++.+..++.+ +|||||||++|+|++|..||.+......... +..
T Consensus       154 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~  233 (361)
T 3uc3_A          154 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR  233 (361)
T ss_dssp             SCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHH
T ss_pred             CceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence            2347888888876332  22234579999999999998888755 8999999999999999999986543221111 111


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ....                     ...++                        ....+++.+.+||.+||+.||++|||
T Consensus       234 ~~~~---------------------~~~~~------------------------~~~~~s~~~~~li~~~L~~dP~~Rps  268 (361)
T 3uc3_A          234 ILSV---------------------KYSIP------------------------DDIRISPECCHLISRIFVADPATRIS  268 (361)
T ss_dssp             HHTT---------------------CCCCC------------------------TTSCCCHHHHHHHHHHSCSCTTTSCC
T ss_pred             HhcC---------------------CCCCC------------------------CcCCCCHHHHHHHHHHccCChhHCcC
Confidence            1100                     00000                        01235678999999999999999999


Q ss_pred             HHHHHcCCCCCCCC
Q 015532          380 AREALRHPFFTRDV  393 (405)
Q Consensus       380 a~elL~hp~f~~~~  393 (405)
                      +.|+++||||.+..
T Consensus       269 ~~ell~hp~f~~~~  282 (361)
T 3uc3_A          269 IPEIKTHSWFLKNL  282 (361)
T ss_dssp             HHHHHTSHHHHTTC
T ss_pred             HHHHHhCcchhcCC
Confidence            99999999997654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=5.7e-44  Score=331.49  Aligned_cols=239  Identities=25%  Similarity=0.394  Sum_probs=194.3

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.+.|+++....          
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY   81 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEE
Confidence            356789999999999999999999999999999999996533   2345677899999999999884321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+||+++.++                   
T Consensus        82 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-------------------  142 (284)
T 3kk8_A           82 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA-------------------  142 (284)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS-------------------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC-------------------
Confidence                             13478899999999999999999999999999999999997543                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                           ....++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+........
T Consensus       143 -----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~  217 (284)
T 3kk8_A          143 -----KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA  217 (284)
T ss_dssp             -----TTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             -----CCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH
Confidence                 23457888888886554332  23579999999999999899999999999999999999999999887776665


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.......|.                                              ......++.+.+||.+||+.||+
T Consensus       218 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~dp~  251 (284)
T 3kk8_A          218 QIKAGAYDYPS----------------------------------------------PEWDTVTPEAKSLIDSMLTVNPK  251 (284)
T ss_dssp             HHHHTCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHHSCSSTT
T ss_pred             HHHhccccCCc----------------------------------------------hhhcccCHHHHHHHHHHcccChh
Confidence            55443222111                                              11134567899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~~~  396 (405)
                      +|||++|+|+||||++..+..
T Consensus       252 ~Rps~~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          252 KRITADQALKVPWICNRERVA  272 (284)
T ss_dssp             TSCCHHHHTTSHHHHSCCCGG
T ss_pred             hCCCHHHHhcCccccCChhHH
Confidence            999999999999998865443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.1e-44  Score=344.96  Aligned_cols=225  Identities=24%  Similarity=0.342  Sum_probs=182.0

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc-----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR-----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~-----------  154 (405)
                      .++|++++.||+|+||.||+|+++.+++.||||++++..    ...+....|..++..+ .|+++....           
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            367999999999999999999999999999999997532    3346677899999887 555553211           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                   
T Consensus        99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~-------------------  159 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH-------------------  159 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC-------------------
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCc-------------------
Confidence                            246789999999999999999999999999999999999987664                   


Q ss_pred             cCCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       160 --------vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~  231 (353)
T 2i0e_A          160 --------IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ  231 (353)
T ss_dssp             --------EEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --------EEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH
Confidence                    5555555554321   12234689999999999999999999999999999999999999999887776665


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.......                                                  +...+.++.+||.+||+.||+
T Consensus       232 ~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~lL~~dP~  261 (353)
T 2i0e_A          232 SIMEHNVAY--------------------------------------------------PKSMSKEAVAICKGLMTKHPG  261 (353)
T ss_dssp             HHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSCTT
T ss_pred             HHHhCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhhcCHH
Confidence            554321111                                                  123567899999999999999


Q ss_pred             CCC-----CHHHHHcCCCCCCC
Q 015532          376 ERL-----KAREALRHPFFTRD  392 (405)
Q Consensus       376 ~Rp-----ta~elL~hp~f~~~  392 (405)
                      +|+     +++++++||||+.-
T Consensus       262 ~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          262 KRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             SCTTCSTTHHHHHHTSGGGTTC
T ss_pred             HcCCCCCCCHHHHhcCccccCC
Confidence            999     47999999999863

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3.3e-44  Score=339.82  Aligned_cols=231  Identities=22%  Similarity=0.370  Sum_probs=179.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.++|++.+.||+|+||+||+|++..+++.||||++....  ...+.+.+|+.+++.+.|+++....             
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            5678999999999999999999999999999999986432  2346678999999999999984321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++                      
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~----------------------  142 (323)
T 3tki_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD----------------------  142 (323)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC----------------------
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC----------------------
Confidence                          23578999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                           .+||+|||++......     ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.........
T Consensus       143 -----~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  217 (323)
T 3tki_A          143 -----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE  217 (323)
T ss_dssp             -----CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH
T ss_pred             -----CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH
Confidence                 4666677766533211     223579999999999988775 67899999999999999999999765543211


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ........                                               ........+++.+.+||.+||+.||
T Consensus       218 ~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~li~~~L~~dP  250 (323)
T 3tki_A          218 YSDWKEKK-----------------------------------------------TYLNPWKKIDSAPLALLHKILVENP  250 (323)
T ss_dssp             HHHHHTTC-----------------------------------------------TTSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHhccc-----------------------------------------------ccCCccccCCHHHHHHHHHHccCCh
Confidence            11100000                                               0001113456788999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~  394 (405)
                      ++|||++|+++||||++...
T Consensus       251 ~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          251 SARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             TTSCCHHHHTTCTTTTCCCC
T ss_pred             hhCcCHHHHhhChhhccccc
Confidence            99999999999999987543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3.7e-44  Score=343.14  Aligned_cols=238  Identities=26%  Similarity=0.410  Sum_probs=176.3

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+.+.++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|+.+++++.|+++....            
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence            3456788999999999999999999999999999999997543 345677899999999999984321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+|||++..                      
T Consensus       127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~----------------------  184 (349)
T 2w4o_A          127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP----------------------  184 (349)
T ss_dssp             ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS----------------------
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC----------------------
Confidence                           2347899999999999999999999999999999999999642                      


Q ss_pred             CCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-HLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~-~~~~  296 (405)
                        +.+..+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||......+ .+..
T Consensus       185 --~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  262 (349)
T 2w4o_A          185 --APDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR  262 (349)
T ss_dssp             --STTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH
T ss_pred             --CCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH
Confidence              12446788888887654432  234579999999999999899999999999999999999999997765544 2222


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.......+                                              ......++.++.+||.+||+.||++
T Consensus       263 i~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~L~~dP~~  296 (349)
T 2w4o_A          263 ILNCEYYFI----------------------------------------------SPWWDEVSLNAKDLVRKLIVLDPKK  296 (349)
T ss_dssp             HHTTCCCCC----------------------------------------------TTTTTTSCHHHHHHHHTTSCSSGGG
T ss_pred             HHhCCCccC----------------------------------------------CchhhhCCHHHHHHHHHHccCChhh
Confidence            221110000                                              0112345778999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~~  395 (405)
                      |||+.|+|+||||++....
T Consensus       297 Rpt~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          297 RLTTFQALQHPWVTGKAAN  315 (349)
T ss_dssp             SCCHHHHHHSTTTTSTTCC
T ss_pred             CcCHHHHhcCcccCCCccc
Confidence            9999999999999986543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.2e-44  Score=337.27  Aligned_cols=237  Identities=24%  Similarity=0.324  Sum_probs=180.5

Q ss_pred             CCCCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHH-hhcCCCC
Q 015532           77 DKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGG  152 (405)
Q Consensus        77 ~~~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l-~~~~~~~  152 (405)
                      ...++++...++.+.++|++.++||+|+||+||+|++..+++.||||++...   .........|+..+..+ .|+++..
T Consensus        42 ~~~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~  121 (311)
T 3p1a_A           42 QSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR  121 (311)
T ss_dssp             CCTTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            3445556666777888999999999999999999999999999999998542   23334555677666666 7777643


Q ss_pred             Cc---------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCc
Q 015532          153 TR---------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       153 ~~---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df  205 (405)
                      ..                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++.      
T Consensus       122 l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~------  195 (311)
T 3p1a_A          122 LEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR------  195 (311)
T ss_dssp             EEEEEEETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGC------
T ss_pred             EEEEEEeCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCC------
Confidence            21                           135899999999999999999999999999999999999977654      


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCC
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                                           +||+|||++......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..
T Consensus       196 ---------------------~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~  253 (311)
T 3p1a_A          196 ---------------------CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNME  253 (311)
T ss_dssp             ---------------------EEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCC
T ss_pred             ---------------------EEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCC
Confidence                                 566666665443322  123468999999999886 79999999999999999999977


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      ||.+......   +..  +..+.                                              .....+++.+.
T Consensus       254 ~~~~~~~~~~---~~~--~~~~~----------------------------------------------~~~~~~~~~l~  282 (311)
T 3p1a_A          254 LPHGGEGWQQ---LRQ--GYLPP----------------------------------------------EFTAGLSSELR  282 (311)
T ss_dssp             CCSSHHHHHH---HTT--TCCCH----------------------------------------------HHHTTSCHHHH
T ss_pred             CCCCccHHHH---Hhc--cCCCc----------------------------------------------ccccCCCHHHH
Confidence            7754322111   100  11111                                              11234577899


Q ss_pred             HHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          364 DLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +||.+||+.||++|||++|+|+||||++.
T Consensus       283 ~li~~~L~~dP~~Rpt~~ell~hp~~~~p  311 (311)
T 3p1a_A          283 SVLVMMLEPDPKLRATAEALLALPVLRQP  311 (311)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGSCC
T ss_pred             HHHHHHcCCChhhCcCHHHHHhCccccCC
Confidence            99999999999999999999999999873

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-44  Score=337.23  Aligned_cols=226  Identities=24%  Similarity=0.401  Sum_probs=176.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---------------------------hhHHHHHHHHHHH
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------------------------YREAAMIEIDVLQ  143 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------------------------~~~~~~~E~~il~  143 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||++.....                           ..+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999864321                           1245788999999


Q ss_pred             HHhhcCCCCCc----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe
Q 015532          144 RLARHDIGGTR----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  195 (405)
Q Consensus       144 ~l~~~~~~~~~----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~  195 (405)
                      .+.|+++....                            ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~  171 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG  171 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence            99999874311                            23578999999999999999999999999999999999997


Q ss_pred             cccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCC---CCCchhHH
Q 015532          196 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG---WNYPCDLW  269 (405)
Q Consensus       196 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~---~~~~~Diw  269 (405)
                      .++                           .+||+|||++.......   ....||+.|+|||++.+..   ++.++|||
T Consensus       172 ~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~  224 (298)
T 2zv2_A          172 EDG---------------------------HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVW  224 (298)
T ss_dssp             TTS---------------------------CEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHH
T ss_pred             CCC---------------------------CEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhH
Confidence            655                           45666666665433221   2357999999999998765   37889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchh
Q 015532          270 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  349 (405)
Q Consensus       270 SlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (405)
                      ||||++|+|++|..||.+.........+......                        ++                    
T Consensus       225 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------------------~~--------------------  260 (298)
T 2zv2_A          225 AMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALE------------------------FP--------------------  260 (298)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC------------------------CC--------------------
T ss_pred             hHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCC------------------------CC--------------------
Confidence            9999999999999999877655443333221111                        00                    


Q ss_pred             hhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       350 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                          ....+++.+.+||.+||+.||++|||+.|+|+||||++
T Consensus       261 ----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          261 ----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             ----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             ----CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                11245678999999999999999999999999999963

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=5.4e-44  Score=342.08  Aligned_cols=259  Identities=28%  Similarity=0.498  Sum_probs=194.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.++||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.+.|+++....              
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            68999999999999999999999999999999985432   2345678899999999999874311              


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++.              
T Consensus        97 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~--------------  162 (351)
T 3mi9_A           97 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--------------  162 (351)
T ss_dssp             CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--------------
T ss_pred             ceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCC--------------
Confidence                                 135789999999999999999999999999999999999987665              


Q ss_pred             CCCcccCCCCCCCceeccCCCCcccc-------CCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEH-------QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                                   +||+|||++....       .......||+.|+|||++.+. .++.++|||||||++|+|++|.+||
T Consensus       163 -------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  229 (351)
T 3mi9_A          163 -------------LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM  229 (351)
T ss_dssp             -------------EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             -------------EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence                         4555555553322       111235789999999999874 5899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       286 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      .+....+.+..+.+..+.++...........  .+.   ..........  .......         .  ...++.+.+|
T Consensus       230 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~--~~~~~~~---------~--~~~~~~~~~l  291 (351)
T 3mi9_A          230 QGNTEQHQLALISQLCGSITPEVWPNVDNYE--LYE---KLELVKGQKR--KVKDRLK---------A--YVRDPYALDL  291 (351)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCTTTSTTGGGCG--GGT---SSCCCSSCCC--CHHHHHH---------H--HHCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCCChhhccccccch--hhc---cccccccccc--CHHHHhh---------h--ccCChHHHHH
Confidence            9999999999999998887765432221100  000   0000000000  0000000         0  0125678999


Q ss_pred             HHHccccCCCCCCCHHHHHcCCCCCCCCCC
Q 015532          366 LQGLLRYDPAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~hp~f~~~~~~  395 (405)
                      |.+||++||++|||++|+|+||||+.....
T Consensus       292 i~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          292 IDKLLVLDPAQRIDSDDALNHDFFWSDPMP  321 (351)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred             HHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence            999999999999999999999999876543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.9e-44  Score=344.89  Aligned_cols=258  Identities=30%  Similarity=0.475  Sum_probs=191.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.+.||+|+||+||+|++..+++.||||++............|++.+..+.|+++....                
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  101 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL  101 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence            3689999999999999999999999999999999876655556677888999999999885421                


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHH--HCCcEecCCCCCcEEEec-ccccccCCcccccc
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVS-AEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH--~~givHrDlkp~NIli~~-~~~~k~~df~~~~~  210 (405)
                                           ...+++..++.++.||+.||.|||  ++||+||||||+|||++. ++            
T Consensus       102 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~------------  169 (360)
T 3e3p_A          102 NVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADG------------  169 (360)
T ss_dssp             EEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTT------------
T ss_pred             EEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCC------------
Confidence                                 124577888999999999999999  999999999999999975 44            


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                     .+||+|||++.......  ....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+
T Consensus       170 ---------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  234 (360)
T 3e3p_A          170 ---------------TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG  234 (360)
T ss_dssp             ---------------EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------------cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence                           46777777765443322  2357899999999997654 89999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .+..+.+..+.+..+.++..+..........+       .+.....           ..+...........++++.+||.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~li~  296 (360)
T 3e3p_A          235 DNSAGQLHEIVRVLGCPSREVLRKLNPSHTDV-------DLYNSKG-----------IPWSNVFSDHSLKDAKEAYDLLS  296 (360)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCG-------GGGCCCC-----------CCHHHHTTTCCCTTHHHHHHHHH
T ss_pred             CChHHHHHHHHHHcCCCCHHHHHhcccchhhc-------ccccccc-----------CCcccccchhhccccHHHHHHHH
Confidence            99999999999999998887665442211110       0000000           00111112223346789999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +||++||++|||+.|+|+||||++..
T Consensus       297 ~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          297 ALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             HHhccCccccCCHHHHhcCccccccC
Confidence            99999999999999999999998753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.2e-45  Score=351.07  Aligned_cols=228  Identities=25%  Similarity=0.376  Sum_probs=181.5

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ...++|++.+.||+|+||+||+|++..+++.||||++....    .....+.+|+.+++.+.|+++....          
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            34578999999999999999999999999999999996432    2345688999999999999985421          


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++.+++.++.||+.||.|||++||+||||||+|||++.++                    
T Consensus        86 lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~--------------------  145 (336)
T 3h4j_B           86 MVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL--------------------  145 (336)
T ss_dssp             EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC--------------------
T ss_pred             EEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC--------------------
Confidence                            24578999999999999999999999999999999999997655                    


Q ss_pred             cCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                             .+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+....+...
T Consensus       146 -------~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~  218 (336)
T 3h4j_B          146 -------NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK  218 (336)
T ss_dssp             -------CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC
T ss_pred             -------CEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence                   4666777766543322  234579999999999988776 689999999999999999999997643211100


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+                                                  .......+...++.+.+||.+||+.||+
T Consensus       219 ~i--------------------------------------------------~~~~~~~p~~~s~~~~~li~~~L~~dP~  248 (336)
T 3h4j_B          219 KV--------------------------------------------------NSCVYVMPDFLSPGAQSLIRRMIVADPM  248 (336)
T ss_dssp             CC--------------------------------------------------CSSCCCCCTTSCHHHHHHHHTTSCSSGG
T ss_pred             HH--------------------------------------------------HcCCCCCcccCCHHHHHHHHHHcCCChh
Confidence            00                                                  0000112234577899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDV  393 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~  393 (405)
                      +|||++|+++||||+...
T Consensus       249 ~Rpt~~eil~hp~~~~~~  266 (336)
T 3h4j_B          249 QRITIQEIRRDPWFNVNL  266 (336)
T ss_dssp             GSCCHHHHTTCHHHHTTC
T ss_pred             HCcCHHHHHhChhhccCC
Confidence            999999999999998753

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=5.6e-44  Score=341.18  Aligned_cols=224  Identities=22%  Similarity=0.384  Sum_probs=175.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHH-hhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l-~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||.||+|+++.+++.||||++++..    ...+.+.+|+.++..+ .|+++....            
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57999999999999999999999999999999997532    2345577899999988 788774321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||             
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG-------------  155 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-------------  155 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGG-------------
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecc-------------
Confidence                           1458899999999999999999999999999999999999877655555555             


Q ss_pred             CCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-----
Q 015532          220 NLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL-----  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~-----  291 (405)
                                    ++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||......     
T Consensus       156 --------------~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  221 (345)
T 3a8x_A          156 --------------MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ  221 (345)
T ss_dssp             --------------GCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------
T ss_pred             --------------ccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc
Confidence                          443211   1223458999999999999999999999999999999999999999653211     


Q ss_pred             ----HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          292 ----EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       292 ----~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                          .....+...                        .                          ...+...+.++.+||.
T Consensus       222 ~~~~~~~~~i~~~------------------------~--------------------------~~~p~~~s~~~~~li~  251 (345)
T 3a8x_A          222 NTEDYLFQVILEK------------------------Q--------------------------IRIPRSLSVKAASVLK  251 (345)
T ss_dssp             -CHHHHHHHHHHC------------------------C--------------------------CCCCTTSCHHHHHHHH
T ss_pred             ccHHHHHHHHHcC------------------------C--------------------------CCCCCCCCHHHHHHHH
Confidence                111111110                        0                          0112345778999999


Q ss_pred             HccccCCCCCCCH------HHHHcCCCCCCC
Q 015532          368 GLLRYDPAERLKA------REALRHPFFTRD  392 (405)
Q Consensus       368 ~~L~~dP~~Rpta------~elL~hp~f~~~  392 (405)
                      +||+.||++||++      +|+++||||++-
T Consensus       252 ~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          252 SFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             HHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            9999999999995      899999999864

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=5.4e-44  Score=358.46  Aligned_cols=245  Identities=27%  Similarity=0.446  Sum_probs=197.4

Q ss_pred             CCCceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--------------hhhHHHHHHHHHHHH
Q 015532           79 DGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------------KYREAAMIEIDVLQR  144 (405)
Q Consensus        79 ~~~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--------------~~~~~~~~E~~il~~  144 (405)
                      .+.+....+..+.++|+++++||+|+||+||+|++..+++.||||+++...              ...+.+.+|+.+++.
T Consensus        23 ~~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  102 (504)
T 3q5i_A           23 PGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS  102 (504)
T ss_dssp             GGGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHT
T ss_pred             hhheeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHh
Confidence            344555666778899999999999999999999999999999999996532              335678899999999


Q ss_pred             HhhcCCCCCc---------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          145 LARHDIGGTR---------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       145 l~~~~~~~~~---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                      +.|+++....                           ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       103 l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  182 (504)
T 3q5i_A          103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK  182 (504)
T ss_dssp             CCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST
T ss_pred             CCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC
Confidence            9999984321                           2457899999999999999999999999999999999999764


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  275 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  275 (405)
                      +                        ....+||+|||++......  ....+||+.|+|||++.+ .|+.++|||||||++
T Consensus       183 ~------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il  237 (504)
T 3q5i_A          183 N------------------------SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIM  237 (504)
T ss_dssp             T------------------------CCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHH
T ss_pred             C------------------------CCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHH
Confidence            3                        2235889999988765433  234579999999999875 699999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcc
Q 015532          276 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  355 (405)
Q Consensus       276 ~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
                      |+|++|.+||.+.+..+.+..+.......+.                                              ..+
T Consensus       238 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~  271 (504)
T 3q5i_A          238 YILLCGYPPFGGQNDQDIIKKVEKGKYYFDF----------------------------------------------NDW  271 (504)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH----------------------------------------------HHH
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc----------------------------------------------ccc
Confidence            9999999999998887777666543222211                                              112


Q ss_pred             cCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       356 ~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      ..+++++++||.+||++||++|||++|+|+||||++...
T Consensus       272 ~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          272 KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             CCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            345778999999999999999999999999999987543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1e-43  Score=336.09  Aligned_cols=237  Identities=27%  Similarity=0.419  Sum_probs=192.4

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-------hhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||+++....       ..+.+.+|+.+++.+.|+++....      
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   87 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR   87 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            4466789999999999999999999999999999999965321       356788999999999999984321      


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++.              
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~--------------  153 (321)
T 2a2a_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI--------------  153 (321)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS--------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCC--------------
Confidence                                 234688999999999999999999999999999999999976541              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                               ....++|+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       154 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  224 (321)
T 2a2a_A          154 ---------PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ  224 (321)
T ss_dssp             ---------SSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ---------CcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH
Confidence                     12257888888876544322  3357999999999999989999999999999999999999999988777


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +.+..+.......+..                                              .....+..+.+||.+||+
T Consensus       225 ~~~~~i~~~~~~~~~~----------------------------------------------~~~~~~~~~~~li~~~l~  258 (321)
T 2a2a_A          225 ETLANITSVSYDFDEE----------------------------------------------FFSHTSELAKDFIRKLLV  258 (321)
T ss_dssp             HHHHHHHTTCCCCCHH----------------------------------------------HHTTCCHHHHHHHHTTSC
T ss_pred             HHHHHHHhcccccChh----------------------------------------------hhcccCHHHHHHHHHHcC
Confidence            7666554432222221                                              112446789999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .||++|||++|+|+||||+...
T Consensus       259 ~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          259 KETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             SSTTTSCCHHHHHHSTTTSCSS
T ss_pred             CChhhCcCHHHHhcCccccCCC
Confidence            9999999999999999998653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.7e-44  Score=350.18  Aligned_cols=231  Identities=24%  Similarity=0.431  Sum_probs=172.7

Q ss_pred             CCCeEEE-eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc--------------
Q 015532           91 TPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~-~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~--------------  154 (405)
                      .++|.+. +.||+|+||+||+|++..+++.||||+++..    ....+|+.++.++ .|+++....              
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            3567776 7899999999999999999999999999643    3456788887555 667763311              


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++..+                 
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~-----------------  198 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-----------------  198 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-----------------
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC-----------------
Confidence                               12478999999999999999999999999999999999997521                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-  292 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~-  292 (405)
                             .+..+||+|||++......  ....+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+..... 
T Consensus       199 -------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  271 (400)
T 1nxk_A          199 -------PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI  271 (400)
T ss_dssp             -------TTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS
T ss_pred             -------CCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc
Confidence                   2346788888888654432  234689999999999998899999999999999999999999997654321 


Q ss_pred             ---HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          293 ---HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       293 ---~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                         ....+...                        ...++                      ...+..++.++.+||.+|
T Consensus       272 ~~~~~~~i~~~------------------------~~~~~----------------------~~~~~~~s~~~~~li~~~  305 (400)
T 1nxk_A          272 SPGMKTRIRMG------------------------QYEFP----------------------NPEWSEVSEEVKMLIRNL  305 (400)
T ss_dssp             CCSHHHHHHHT------------------------CCCCC----------------------TTTTTTSCHHHHHHHHTT
T ss_pred             cHHHHHHHHcC------------------------cccCC----------------------CcccccCCHHHHHHHHHH
Confidence               11111110                        00000                      011234677899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~~~~  395 (405)
                      |+.||++|||++|+|+||||.+....
T Consensus       306 L~~dP~~Rpt~~eil~hp~~~~~~~~  331 (400)
T 1nxk_A          306 LKTEPTQRMTITEFMNHPWIMQSTKV  331 (400)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHTTTTS
T ss_pred             CCCChhHCcCHHHHhcCccccCCCCC
Confidence            99999999999999999999876543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.7e-44  Score=349.97  Aligned_cols=269  Identities=26%  Similarity=0.456  Sum_probs=184.9

Q ss_pred             CccCCCeEEE-eeeecccceeEEEEEec--CCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCcc---------
Q 015532           88 ENLTPRYRIL-SKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRY---------  155 (405)
Q Consensus        88 ~~~~~~y~~~-~~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~~---------  155 (405)
                      +.+.+.|++. ++||+|+||+||+|+++  .+++.||||++.... ....+.+|+.+|+.+.|++++....         
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   94 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRK   94 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence            3455678884 58999999999999965  568899999997533 3456789999999999999854320         


Q ss_pred             ----------------------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          156 ----------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       156 ----------------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                                                  ..+++..++.++.||+.||.|||++||+||||||+|||+...+         
T Consensus        95 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~---------  165 (405)
T 3rgf_A           95 VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG---------  165 (405)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSS---------
T ss_pred             EEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCC---------
Confidence                                        1388899999999999999999999999999999999995321         


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHh
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~llt  280 (405)
                                    +.+..+||+|||++......      ....+||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus       166 --------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  231 (405)
T 3rgf_A          166 --------------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT  231 (405)
T ss_dssp             --------------TTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHh
Confidence                          23456888888888654422      2335799999999999875 48999999999999999999


Q ss_pred             CCCCCCCCCh---------HHHHHHHHHHhCCCChHHHHHhhHhhH--HhhhcCCcccCCCCCCchhhHHHHHHhccchh
Q 015532          281 GEALFQTHEN---------LEHLAMMERVLGPLPHHMVIRADRRAE--KYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  349 (405)
Q Consensus       281 g~~pf~~~~~---------~~~~~~i~~~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (405)
                      |.+||.+...         .+.+..+...+|.++...+........  ..........+.              ......
T Consensus       232 g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~  297 (405)
T 3rgf_A          232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT--------------NCSLIK  297 (405)
T ss_dssp             SSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGT--------------TCCHHH
T ss_pred             CCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCC--------------cchhhh
Confidence            9999976554         477788888888766533211110000  000000000000              000001


Q ss_pred             hhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       350 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .........++.+.+||.+||++||++|||++|+|+||||++...
T Consensus       298 ~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          298 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             HHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             hHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence            111112233668999999999999999999999999999988643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=6.2e-44  Score=347.83  Aligned_cols=230  Identities=23%  Similarity=0.390  Sum_probs=185.4

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++.++||+|+||+||+|+++.+++.||||++++..    ...+.+.+|+.+++.+.|++++...            
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            468999999999999999999999999999999996532    2234577899999999999985421            


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                     
T Consensus       148 ~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~---------------------  206 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH---------------------  206 (410)
T ss_dssp             ECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC---------------------
T ss_pred             EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCC---------------------
Confidence                          135789999999999999999999999999999999999976654                     


Q ss_pred             CCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCC----CCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                            +||+|||++......    ....+||+.|+|||++.+..    |+.++|||||||++|+|++|.+||.+.+..+
T Consensus       207 ------ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  280 (410)
T 3v8s_A          207 ------LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG  280 (410)
T ss_dssp             ------EEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             ------EEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh
Confidence                  566666666543322    12468999999999998765    7899999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.....                      ...+|                        ....++.++++||.+||+.
T Consensus       281 ~~~~i~~~~~----------------------~~~~p------------------------~~~~~s~~~~~li~~lL~~  314 (410)
T 3v8s_A          281 TYSKIMNHKN----------------------SLTFP------------------------DDNDISKEAKNLICAFLTD  314 (410)
T ss_dssp             HHHHHHTHHH----------------------HCCCC------------------------TTCCCCHHHHHHHHHHSSC
T ss_pred             HHHHHHhccc----------------------cccCC------------------------CcccccHHHHHHHHHHccC
Confidence            6665543210                      00011                        1124577999999999999


Q ss_pred             CCCC--CCCHHHHHcCCCCCCCC
Q 015532          373 DPAE--RLKAREALRHPFFTRDV  393 (405)
Q Consensus       373 dP~~--Rpta~elL~hp~f~~~~  393 (405)
                      +|++  |++++|+++||||++..
T Consensus       315 ~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          315 REVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             GGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             hhhhCCCCCHHHHhcCccccCCC
Confidence            9998  99999999999999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=8.5e-44  Score=337.57  Aligned_cols=248  Identities=25%  Similarity=0.329  Sum_probs=194.8

Q ss_pred             CCCCCceEeeCCccCCCeEEE-eeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhh-cCCC
Q 015532           77 DKDGHYVFAIGENLTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLAR-HDIG  151 (405)
Q Consensus        77 ~~~~~~~~~~~~~~~~~y~~~-~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~-~~~~  151 (405)
                      +..+...+..++.+.++|.+. +.||+|+||+||+|++..+++.||||+++...   .....+.+|+.+++.+.+ +++.
T Consensus        13 ~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv   92 (327)
T 3lm5_A           13 LGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI   92 (327)
T ss_dssp             ---CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBC
T ss_pred             ccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEE
Confidence            344456677778889999998 89999999999999999999999999996532   335678899999999966 5552


Q ss_pred             CC-----------------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccccc
Q 015532          152 GT-----------------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       152 ~~-----------------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~  202 (405)
                      ..                             ....+++..++.++.||+.||.|||++||+||||||+|||++...    
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~----  168 (327)
T 3lm5_A           93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY----  168 (327)
T ss_dssp             CEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT----
T ss_pred             EEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC----
Confidence            21                             124578999999999999999999999999999999999997521    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                                          ....+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       169 --------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  228 (327)
T 3lm5_A          169 --------------------PLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT  228 (327)
T ss_dssp             --------------------TBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             --------------------CCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh
Confidence                                13457777777776543322  23579999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+.+..+....+.......+.                                              .....+++
T Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~  262 (327)
T 3lm5_A          229 HTSPFVGEDNQETYLNISQVNVDYSE----------------------------------------------ETFSSVSQ  262 (327)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TTTTTSCH
T ss_pred             CCCCCCCCCchHHHHHHHhcccccCc----------------------------------------------hhhcccCH
Confidence            99999988877766665544322221                                              11234567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .+.+||.+||+.||++|||++|+|+||||++...
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            8999999999999999999999999999987643

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=3.4e-43  Score=336.53  Aligned_cols=273  Identities=28%  Similarity=0.424  Sum_probs=195.9

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      +..+.++|++.+.||+|+||.||+|++..+++.||||+++..  ......+.+|+.+++.+.|+++....          
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   85 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFEN   85 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTT
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCc
Confidence            455778999999999999999999999999999999999643  23445677899999999999885321          


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        86 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A           86 FNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             CCCEEEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             cceEEEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence                                134788999999999999999999999999999999999987765555555543322111


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                      .....              ............+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus       166 ~~~~~--------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  231 (353)
T 2b9h_A          166 AADNS--------------EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ  231 (353)
T ss_dssp             ----------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ccccc--------------CccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            00000              00000001122478999999999875 5789999999999999999999999999998888


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhc-cch-hhhhhcccCchHHHHHHHHHccc
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL-RLP-NLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +..+....+.++......                    .............. ..+ .........+++++.+||.+||+
T Consensus       232 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  291 (353)
T 2b9h_A          232 LLLIFGIIGTPHSDNDLR--------------------CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV  291 (353)
T ss_dssp             HHHHHHHHCCCCSTTTTT--------------------TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHhCCCchhcccc--------------------ccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC
Confidence            888888777654211000                    00000011111100 000 11112234567899999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .||++|||++|+|+||||+...
T Consensus       292 ~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          292 FDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTTC
T ss_pred             cCcccCCCHHHHhcCccccccC
Confidence            9999999999999999998753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=3.8e-43  Score=337.54  Aligned_cols=260  Identities=27%  Similarity=0.444  Sum_probs=194.3

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh------------hhhHHHHHHHHHHHHHhhcCCCCCc
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------------KYREAAMIEIDVLQRLARHDIGGTR  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------------~~~~~~~~E~~il~~l~~~~~~~~~  154 (405)
                      ...+.++|++.+.||+|+||.||+|.+.. ++.||||++....            ...+.+.+|+.+++.+.|+++....
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   95 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR   95 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcccee
Confidence            34567899999999999999999999865 8899999985321            1236788999999999999985421


Q ss_pred             --------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccccc
Q 015532          155 --------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       155 --------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~  202 (405)
                                                      ...+++..++.++.||+.||.|||++||+||||||+|||++.++    
T Consensus        96 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~----  171 (362)
T 3pg1_A           96 DIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN----  171 (362)
T ss_dssp             EEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC----
T ss_pred             eeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC----
Confidence                                            12478999999999999999999999999999999999997655    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHH
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~ll  279 (405)
                                             .+||+|||++......  .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus       172 -----------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  228 (362)
T 3pg1_A          172 -----------------------DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF  228 (362)
T ss_dssp             -----------------------CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred             -----------------------CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHH
Confidence                                   4677777776533222  233578999999999987 57899999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHh-hHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCc
Q 015532          280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  358 (405)
Q Consensus       280 tg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (405)
                      +|..||.+....+.+..+....+.++.......... ...+.... ....+.                  ..........
T Consensus       229 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~  289 (362)
T 3pg1_A          229 NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS-LSNVPA------------------RAWTAVVPTA  289 (362)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTC-CCCCCC------------------CCHHHHSTTS
T ss_pred             hCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhh-cccCCh------------------hhHHhhCCCC
Confidence            999999999999999999998888776543322111 11111111 011110                  0111223455


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          359 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       359 ~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ++.+.+||.+||++||++|||+.|+|+||||++-.
T Consensus       290 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          290 DPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            77899999999999999999999999999999853

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=3.7e-44  Score=358.08  Aligned_cols=236  Identities=31%  Similarity=0.546  Sum_probs=192.3

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .+.++|++.++||+|+||+||+|++..+++.||||++...   ......+.+|+.+++.+.|+++....           
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            3467899999999999999999999999999999999643   23456788999999999999985421           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||.|||++||+||||||+|||++..+                    
T Consensus        99 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~--------------------  158 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE--------------------  158 (486)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS--------------------
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC--------------------
Confidence                            24578999999999999999999999999999999999996532                    


Q ss_pred             cCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                          ....+||+|||++.......  ...+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..
T Consensus       159 ----~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  233 (486)
T 3mwu_A          159 ----KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR  233 (486)
T ss_dssp             ----TTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             ----CCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                34468899999887544332  33579999999999986 599999999999999999999999999888777666


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.......+                                              ...+..+++++++||.+||+.||++
T Consensus       234 i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~L~~dp~~  267 (486)
T 3mwu_A          234 VETGKYAFD----------------------------------------------LPQWRTISDDAKDLIRKMLTFHPSL  267 (486)
T ss_dssp             HHHTCCCSC----------------------------------------------SGGGGGSCHHHHHHHHHHTCSSTTT
T ss_pred             HHhCCCCCC----------------------------------------------CcccCCCCHHHHHHHHHHcCCChhh
Confidence            544221111                                              0112345778999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~~  395 (405)
                      |||+.|+|+||||++....
T Consensus       268 R~t~~~~l~hp~~~~~~~~  286 (486)
T 3mwu_A          268 RITATQCLEHPWIQKYSSE  286 (486)
T ss_dssp             SCCHHHHHHCHHHHHTCCC
T ss_pred             CcCHHHHhcCHhhccCccc
Confidence            9999999999999875443

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=342.30  Aligned_cols=231  Identities=28%  Similarity=0.405  Sum_probs=182.3

Q ss_pred             CCCeEE--EeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRI--LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~--~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .+.|.+  .+.||+|+||.||+|++..+++.||||+++... ...+.+.+|+.+++++.|+++....             
T Consensus        86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  165 (373)
T 2x4f_A           86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM  165 (373)
T ss_dssp             GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            344555  678999999999999999999999999997543 3456788999999999999984321             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+|||+..+                      
T Consensus       166 E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----------------------  223 (373)
T 2x4f_A          166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR----------------------  223 (373)
T ss_dssp             ECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET----------------------
T ss_pred             eCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC----------------------
Confidence                           1347889999999999999999999999999999999998532                      


Q ss_pred             CCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                         ....+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+
T Consensus       224 ---~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i  300 (373)
T 2x4f_A          224 ---DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI  300 (373)
T ss_dssp             ---TTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             ---CCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence               23357888888876544322  2357999999999999888999999999999999999999999998877776665


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......++.                                              .....+++++.+||.+||+.||++|
T Consensus       301 ~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~L~~dp~~R  334 (373)
T 2x4f_A          301 LACRWDLED----------------------------------------------EEFQDISEEAKEFISKLLIKEKSWR  334 (373)
T ss_dssp             HHTCCCSCS----------------------------------------------GGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HhccCCCCh----------------------------------------------hhhccCCHHHHHHHHHHcCCChhhC
Confidence            543222111                                              1123457789999999999999999


Q ss_pred             CCHHHHHcCCCCCCC
Q 015532          378 LKAREALRHPFFTRD  392 (405)
Q Consensus       378 pta~elL~hp~f~~~  392 (405)
                      ||++|+|+||||++.
T Consensus       335 ps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          335 ISASEALKHPWLSDH  349 (373)
T ss_dssp             CCHHHHHHSHHHHCH
T ss_pred             CCHHHHhcCcCcCCC
Confidence            999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.4e-43  Score=336.20  Aligned_cols=225  Identities=25%  Similarity=0.385  Sum_probs=176.4

Q ss_pred             CCCeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      .++|++.+.||+|+||.||+|++.   .+++.||||+++...     .....+.+|+.+|+.+.|+++....        
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            367999999999999999999985   688999999997532     2344567899999999999985421        


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~----------------  159 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH----------------  159 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSC----------------
T ss_pred             EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCc----------------
Confidence                               134788899999999999999999999999999999999976654                


Q ss_pred             CcccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                                 +||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       160 -----------~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  228 (327)
T 3a62_A          160 -----------VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK  228 (327)
T ss_dssp             -----------EEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -----------EEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH
Confidence                       56666666543221   1223579999999999999899999999999999999999999999887766


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+.+....+|                                                  ...+..+.+||.+||+.
T Consensus       229 ~~~~i~~~~~~~p--------------------------------------------------~~~~~~~~~li~~~L~~  258 (327)
T 3a62_A          229 TIDKILKCKLNLP--------------------------------------------------PYLTQEARDLLKKLLKR  258 (327)
T ss_dssp             HHHHHHHTCCCCC--------------------------------------------------TTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHhCCCCCC--------------------------------------------------CCCCHHHHHHHHHHHhc
Confidence            6655543221111                                                  23467899999999999


Q ss_pred             CCCCCC-----CHHHHHcCCCCCCC
Q 015532          373 DPAERL-----KAREALRHPFFTRD  392 (405)
Q Consensus       373 dP~~Rp-----ta~elL~hp~f~~~  392 (405)
                      ||++||     +++|+++||||+.-
T Consensus       259 dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          259 NAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             CGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             CHhhccCCCCCCHHHHHcCCcccCC
Confidence            999999     89999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2e-44  Score=359.98  Aligned_cols=239  Identities=30%  Similarity=0.494  Sum_probs=193.5

Q ss_pred             eEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc----
Q 015532           83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR----  154 (405)
Q Consensus        83 ~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~----  154 (405)
                      ....+..+.++|++.+.||+|+||.||+|++..+++.||||++...    ....+.+.+|+.+++.+.|+++....    
T Consensus        17 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   96 (484)
T 3nyv_A           17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE   96 (484)
T ss_dssp             --CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             eccCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            3334456778999999999999999999999999999999998643    23457788999999999999984321    


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..++.++.||+.||.|||++||+||||||+|||++..+             
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-------------  163 (484)
T 3nyv_A           97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS-------------  163 (484)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-------------
T ss_pred             eCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCC-------------
Confidence                                   24578999999999999999999999999999999999995421             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                 .+..+||+|||++.......  ...+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+
T Consensus       164 -----------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  231 (484)
T 3nyv_A          164 -----------KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN  231 (484)
T ss_dssp             -----------TTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence                       34467888888876544332  33579999999999987 69999999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+.+..+.......+                                              ...+..+++.+.+||.+|
T Consensus       232 ~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~  265 (484)
T 3nyv_A          232 EYDILKKVEKGKYTFE----------------------------------------------LPQWKKVSESAKDLIRKM  265 (484)
T ss_dssp             HHHHHHHHHHCCCCCC----------------------------------------------SGGGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCC----------------------------------------------CcccccCCHHHHHHHHHH
Confidence            8777766644221111                                              011234577899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      |++||++|||+.|+|+||||+..
T Consensus       266 L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          266 LTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             TCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             CCCChhHCcCHHHHhhChhhccc
Confidence            99999999999999999999764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-43  Score=329.10  Aligned_cols=231  Identities=28%  Similarity=0.404  Sum_probs=182.3

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+.++|++.++||+|+||.||+|++..+++.||+|++....  ...+.+.+|+++++.+.|+++....            
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   98 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV   98 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence            45678999999999999999999999999999999996543  2346788999999999999984321            


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++..+                 
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~-----------------  161 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS-----------------  161 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS-----------------
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC-----------------
Confidence                               14578899999999999999999999999999999999995421                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                             ....++|+|||++......  .....||+.|+|||++. ..++.++|||||||++|+|++|..||.+....+.
T Consensus       162 -------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~  233 (285)
T 3is5_A          162 -------PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV  233 (285)
T ss_dssp             -------TTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             -------CCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH
Confidence                   3446888999988654332  23457999999999986 4789999999999999999999999988776554


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.......+                                               ......++.+.+||.+||+.|
T Consensus       234 ~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~~L~~d  266 (285)
T 3is5_A          234 QQKATYKEPNYA-----------------------------------------------VECRPLTPQAVDLLKQMLTKD  266 (285)
T ss_dssp             HHHHHHCCCCCC-----------------------------------------------C--CCCCHHHHHHHHHHTCSC
T ss_pred             HhhhccCCcccc-----------------------------------------------cccCcCCHHHHHHHHHHccCC
Confidence            433322111000                                               001224678999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCC
Q 015532          374 PAERLKAREALRHPFFTR  391 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~  391 (405)
                      |++|||+.|+|+||||++
T Consensus       267 P~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          267 PERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             TTTSCCHHHHHTSGGGGC
T ss_pred             hhhCcCHHHHhcCHHhhc
Confidence            999999999999999986

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.9e-44  Score=341.81  Aligned_cols=232  Identities=25%  Similarity=0.414  Sum_probs=181.9

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc-------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR-------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~-------------  154 (405)
                      .+.++|++.+.||+|+||+||+|+++.+++.||||++++...   ...+|++++.++ .|+++....             
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            456789999999999999999999999999999999975432   235688999988 688874321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||+....                      
T Consensus        96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~----------------------  153 (342)
T 2qr7_A           96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES----------------------  153 (342)
T ss_dssp             CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS----------------------
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCC----------------------
Confidence                          23578999999999999999999999999999999999985421                      


Q ss_pred             CCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC---ChHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH---ENLEHL  294 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~---~~~~~~  294 (405)
                       .....+||+|||++......   ....+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.   ...+.+
T Consensus       154 -~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~  232 (342)
T 2qr7_A          154 -GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL  232 (342)
T ss_dssp             -CSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH
T ss_pred             -CCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH
Confidence             12235788888888654332   23457899999999999888999999999999999999999999763   223333


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+......+                                              ....+..+++++.+||.+||+.||
T Consensus       233 ~~i~~~~~~~----------------------------------------------~~~~~~~~s~~~~~li~~~L~~dP  266 (342)
T 2qr7_A          233 ARIGSGKFSL----------------------------------------------SGGYWNSVSDTAKDLVSKMLHVDP  266 (342)
T ss_dssp             HHHHHCCCCC----------------------------------------------CSTTTTTSCHHHHHHHHHHTCSST
T ss_pred             HHHccCCccc----------------------------------------------CccccccCCHHHHHHHHHHCCCCh
Confidence            3332211000                                              011123467899999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRD  392 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~  392 (405)
                      ++|||+.|+|+||||.+.
T Consensus       267 ~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          267 HQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             TTSCCHHHHTTSHHHHTG
T ss_pred             hHCcCHHHHhcCCeecCc
Confidence            999999999999999764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=342.58  Aligned_cols=225  Identities=23%  Similarity=0.423  Sum_probs=180.2

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++++.||+|+||.||+|++..+++.||||++....    .....+.+|+.+|+.+.|++++...            
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            378999999999999999999999999999999996532    2346678899999999999985421            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.+|                     
T Consensus        94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g---------------------  152 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG---------------------  152 (384)
T ss_dssp             ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS---------------------
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC---------------------
Confidence                           23588999999999999999999999999999999999997665                     


Q ss_pred             CCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCChH---
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHENL---  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~---  291 (405)
                            .+||+|||++.....  .....+||+.|+|||++.+   ..|+.++|||||||++|+|++|..||......   
T Consensus       153 ------~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~  226 (384)
T 4fr4_A          153 ------HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK  226 (384)
T ss_dssp             ------CEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH
T ss_pred             ------CEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH
Confidence                  456666666654332  2234689999999999974   45899999999999999999999999754332   


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+.....                                                  ..+..++..+.+||.+||+
T Consensus       227 ~~~~~~~~~~~--------------------------------------------------~~p~~~s~~~~~li~~lL~  256 (384)
T 4fr4_A          227 EIVHTFETTVV--------------------------------------------------TYPSAWSQEMVSLLKKLLE  256 (384)
T ss_dssp             HHHHHHHHCCC--------------------------------------------------CCCTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHhhccc--------------------------------------------------CCCCcCCHHHHHHHHHHhc
Confidence            22222211111                                                  1123456789999999999


Q ss_pred             cCCCCCCC-HHHHHcCCCCCCC
Q 015532          372 YDPAERLK-AREALRHPFFTRD  392 (405)
Q Consensus       372 ~dP~~Rpt-a~elL~hp~f~~~  392 (405)
                      .||++||+ ++++++||||+.-
T Consensus       257 ~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          257 PNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             SSGGGSCCSHHHHHTSGGGTTC
T ss_pred             CCHhHhcccHHHHHcChhhhcC
Confidence            99999998 9999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-43  Score=338.53  Aligned_cols=253  Identities=30%  Similarity=0.525  Sum_probs=186.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh------hhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||+++....      ....+.+|+.+++.+.|+++....          
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            4789999999999999999999999999999999864221      224577899999999999884321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+                 
T Consensus        89 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~-----------------  151 (346)
T 1ua2_A           89 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVL-----------------  151 (346)
T ss_dssp             EEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE-----------------
T ss_pred             EEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCE-----------------
Confidence                             1347888999999999999999999999999999999999876655                 


Q ss_pred             ccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                                ||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.
T Consensus       152 ----------kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~  221 (346)
T 1ua2_A          152 ----------KLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ  221 (346)
T ss_dssp             ----------EECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ----------EEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                      5555554443221   12235789999999999765 588999999999999999999999999999888


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccch-hhhhhcccCchHHHHHHHHHcccc
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      +..+....+.++...                   |+.........    .....+ ..........+.++.+||.+||+.
T Consensus       222 ~~~i~~~~~~~~~~~-------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  278 (346)
T 1ua2_A          222 LTRIFETLGTPTEEQ-------------------WPDMCSLPDYV----TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLF  278 (346)
T ss_dssp             HHHHHHHHCCCCTTT-------------------SSSTTSSTTCC----CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCS
T ss_pred             HHHHHHHcCCCChhh-------------------hhhhccCcccc----cccccCCCChHHhhccCCHHHHHHHHHHhcc
Confidence            888887776654322                   11110000000    000000 001112345678999999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ||++|||++|+|+||||++..
T Consensus       279 dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          279 NPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             STTTSCCHHHHHTSGGGTSSS
T ss_pred             ChhhCCCHHHHhcChhhhcCC
Confidence            999999999999999998753

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.7e-43  Score=347.39  Aligned_cols=232  Identities=25%  Similarity=0.386  Sum_probs=184.8

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..++|++.++||+|+||+||+|+++.+++.||||++++...    ....+..|+.++..+.|+++....           
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l  151 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL  151 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence            34789999999999999999999999999999999975322    223477899999999999874311           


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.                  
T Consensus       152 V~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~------------------  213 (437)
T 4aw2_A          152 VMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH------------------  213 (437)
T ss_dssp             EECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC------------------
T ss_pred             EEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCC------------------
Confidence                             246899999999999999999999999999999999999976654                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                               +||+|||++.......    ...+||+.|+|||++.     +..|+.++|||||||++|||++|..||.+.
T Consensus       214 ---------vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~  284 (437)
T 4aw2_A          214 ---------IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE  284 (437)
T ss_dssp             ---------EEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             ---------EEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence                     5666666654332221    2358999999999997     456899999999999999999999999998


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      +..+....+.....                      ...+|.                       ....+++++++||.+
T Consensus       285 ~~~~~~~~i~~~~~----------------------~~~~p~-----------------------~~~~~s~~~~dLi~~  319 (437)
T 4aw2_A          285 SLVETYGKIMNHKE----------------------RFQFPT-----------------------QVTDVSENAKDLIRR  319 (437)
T ss_dssp             SHHHHHHHHHTHHH----------------------HCCCCS-----------------------SCCCSCHHHHHHHHT
T ss_pred             ChhHHHHhhhhccc----------------------cccCCc-----------------------ccccCCHHHHHHHHH
Confidence            87776665543110                      001110                       113457899999999


Q ss_pred             ccccCCCC--CCCHHHHHcCCCCCCCC
Q 015532          369 LLRYDPAE--RLKAREALRHPFFTRDV  393 (405)
Q Consensus       369 ~L~~dP~~--Rpta~elL~hp~f~~~~  393 (405)
                      ||..+|++  |++++|+++||||++-.
T Consensus       320 lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          320 LICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             TSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             HhcccccccCCCCHHHHhCCCccCCCC
Confidence            99999988  99999999999998754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2.3e-43  Score=335.06  Aligned_cols=257  Identities=28%  Similarity=0.484  Sum_probs=196.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||++....   ...+.+.+|+.+++.+.|+++....             
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            468999999999999999999999999999999985432   3345677899999999999985421             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++.++                      
T Consensus       104 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~----------------------  161 (331)
T 4aaa_A          104 EFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG----------------------  161 (331)
T ss_dssp             ECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS----------------------
T ss_pred             ecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC----------------------
Confidence                          24578899999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                           .++|+|||++......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+....+.+..
T Consensus       162 -----~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  236 (331)
T 4aaa_A          162 -----VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH  236 (331)
T ss_dssp             -----CEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             -----cEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence                 4666777766543321   2235789999999999876 689999999999999999999999999999999988


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....+..++...........  + .  ....+....              ..........+++.+.+||.+||+.||++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~  297 (331)
T 4aaa_A          237 IMMCLGNLIPRHQELFNKNPV--F-A--GVRLPEIKE--------------REPLERRYPKLSEVVIDLAKKCLHIDPDK  297 (331)
T ss_dssp             HHHHHCSCCHHHHHHHHHCGG--G-T--TCCCCCCSS--------------CCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHhCCCChhhhhHhhhccc--c-c--cccCccccc--------------cchhhhcccchhHHHHHHHHHHhccCccc
Confidence            888888877654332211100  0 0  011111000              01111222356789999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDV  393 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~  393 (405)
                      |||++|+|+||||+...
T Consensus       298 Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          298 RPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             SCCGGGGGGSHHHHGGG
T ss_pred             CCCHHHHhcCchhccCC
Confidence            99999999999998653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.3e-43  Score=344.22  Aligned_cols=280  Identities=19%  Similarity=0.217  Sum_probs=183.8

Q ss_pred             CCeEEEeeeecc--cceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEG--TFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G--~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|++.++||+|  +||+||+|++..+++.||||+++...   ...+.+.+|+.+++.+.|++++...            
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  104 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV  104 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence            579999999999  99999999999999999999996532   3446677899999999999985421            


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||++.        
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~--------  176 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL--------  176 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCE--------
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccce--------
Confidence                             1457899999999999999999999999999999999999988877777777542        


Q ss_pred             ccCCCCCCCceeccCCCCccc-cCCccceecCCCcchhHHHhC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                                .+.+.|..... .......+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+.+
T Consensus       177 ----------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  246 (389)
T 3gni_B          177 ----------SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML  246 (389)
T ss_dssp             ----------ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH
T ss_pred             ----------eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                      22222221111 111223478999999999987  57999999999999999999999999886655544


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHH-hccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK-LLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ..+..  +..+....... .....+...........  ........... ..............+++.+.+||.+||++|
T Consensus       247 ~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  321 (389)
T 3gni_B          247 LEKLN--GTVPCLLDTST-IPAEELTMSPSRSVANS--GLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN  321 (389)
T ss_dssp             HHC-------------------------------------------------------------CCHHHHHHHHHHTCSC
T ss_pred             HHHhc--CCCCccccccc-ccccccccccccccccc--ccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC
Confidence            33221  11111000000 00000000000000000  00000000000 000001111233456789999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~  394 (405)
                      |++|||++|+|+||||++...
T Consensus       322 P~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          322 PDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             TTTSCCHHHHTTSGGGGGC--
T ss_pred             cccCCCHHHHhcCHHHHHHhh
Confidence            999999999999999987543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=6e-43  Score=331.72  Aligned_cols=259  Identities=25%  Similarity=0.519  Sum_probs=189.0

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh-hcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~-~~~~~~~~---------------  154 (405)
                      .++|++.+.||+|+||+||+|++..+++.||||+++..  ..+.+.+|+.+++.+. |+++....               
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            36799999999999999999999999999999999743  3466889999999998 77763211               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||.|||++||+||||||+|||++.++                         
T Consensus       113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-------------------------  167 (330)
T 3nsz_A          113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH-------------------------  167 (330)
T ss_dssp             ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT-------------------------
T ss_pred             eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC-------------------------
Confidence                       23578899999999999999999999999999999999997543                         


Q ss_pred             CCCceeccCCCCccccCC--ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ-THENLEHLAMMER  299 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~-~~~~~~~~~~i~~  299 (405)
                       ..++|+|||++......  .....||..|+|||++.+ ..++.++|||||||++|+|++|..||. +....+.+..+.+
T Consensus       168 -~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~  246 (330)
T 3nsz_A          168 -RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK  246 (330)
T ss_dssp             -TEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHH
T ss_pred             -CEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHH
Confidence             24677777777543322  233578999999999987 568999999999999999999999984 4556666776666


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhcc---chh-hhhhcccCchHHHHHHHHHccccCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR---LPN-LIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .++..+..          .+.... ....      ............   +.. ........+++++.+||.+||++||+
T Consensus       247 ~~~~~~~~----------~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  309 (330)
T 3nsz_A          247 VLGTEDLY----------DYIDKY-NIEL------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQ  309 (330)
T ss_dssp             HHCHHHHH----------HHHHHT-TCCC------CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGG
T ss_pred             hcCCchhh----------hHHHHh-cccc------ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcc
Confidence            65532110          000000 0000      000000000000   000 00111223578999999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~  394 (405)
                      +|||++|+|+||||++-.+
T Consensus       310 ~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          310 SRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             GSCCHHHHHTSGGGTTCC-
T ss_pred             cCCCHHHHhcCccHhhhcc
Confidence            9999999999999997543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=8.1e-44  Score=351.89  Aligned_cols=225  Identities=25%  Similarity=0.405  Sum_probs=177.2

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...    .....+.+|+.+++.+.|+++....            
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            468999999999999999999999999999999997532    2334567899999999999884321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                     ...+++..++.++.||+.||+|||+ +||+||||||+|||++.++                    
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~--------------------  286 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--------------------  286 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS--------------------
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC--------------------
Confidence                           2357899999999999999999998 9999999999999997655                    


Q ss_pred             cCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                             .+||+|||++.....   .....+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..+...
T Consensus       287 -------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  359 (446)
T 4ejn_A          287 -------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE  359 (446)
T ss_dssp             -------CEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             -------CEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence                   456666666654221   1234689999999999999999999999999999999999999999887766665


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+......+                                                  +..+++++.+||.+||+.||+
T Consensus       360 ~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~~L~~dP~  389 (446)
T 4ejn_A          360 LILMEEIRF--------------------------------------------------PRTLGPEAKSLLSGLLKKDPK  389 (446)
T ss_dssp             HHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSSTT
T ss_pred             HHHhCCCCC--------------------------------------------------CccCCHHHHHHHHHHcccCHH
Confidence            543321111                                                  123467899999999999999


Q ss_pred             CCC-----CHHHHHcCCCCCCC
Q 015532          376 ERL-----KAREALRHPFFTRD  392 (405)
Q Consensus       376 ~Rp-----ta~elL~hp~f~~~  392 (405)
                      +||     |++|+++||||++-
T Consensus       390 ~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          390 QRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             TSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HhCCCCCCCHHHHHhCccccCC
Confidence            999     99999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=9.9e-44  Score=329.25  Aligned_cols=229  Identities=28%  Similarity=0.445  Sum_probs=184.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||++....    .....+.+|+.+++.+.|+++....            
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            367999999999999999999999999999999986432    2345678899999999999884321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                    
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~--------------------  147 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--------------------  147 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSC--------------------
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCC--------------------
Confidence                           135788999999999999999999999999999999999976654                    


Q ss_pred             CCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                             ++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......+....+.
T Consensus       148 -------~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  220 (279)
T 3fdn_A          148 -------LKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS  220 (279)
T ss_dssp             -------EEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             -------EEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence                   566666655433222 233578999999999999899999999999999999999999999887766665554


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ......|                                                  ...++.+.+||.+||+.||++||
T Consensus       221 ~~~~~~~--------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rp  250 (279)
T 3fdn_A          221 RVEFTFP--------------------------------------------------DFVTEGARDLISRLLKHNPSQRP  250 (279)
T ss_dssp             HTCCCCC--------------------------------------------------TTSCHHHHHHHHHHCCSSGGGSC
T ss_pred             hCCCCCC--------------------------------------------------CcCCHHHHHHHHHHhccChhhCC
Confidence            4322221                                                  23466889999999999999999


Q ss_pred             CHHHHHcCCCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVRRP  396 (405)
Q Consensus       379 ta~elL~hp~f~~~~~~~  396 (405)
                      |++|+|+||||+.....+
T Consensus       251 s~~e~l~h~~~~~~~~~~  268 (279)
T 3fdn_A          251 MLREVLEHPWITANSSKP  268 (279)
T ss_dssp             CHHHHHHCHHHHHHCSSC
T ss_pred             CHHHHhhCccccCCccCc
Confidence            999999999998765544

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=9.8e-44  Score=355.72  Aligned_cols=234  Identities=30%  Similarity=0.489  Sum_probs=188.4

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      ...+.++|+++++||+|+||+||+|+++.+++.||||+++...   .....+.+|+.+++.+.|+++....         
T Consensus        32 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  111 (494)
T 3lij_A           32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY  111 (494)
T ss_dssp             BCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            3446678999999999999999999999999999999996532   3356788999999999999985421         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++..+                  
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~------------------  173 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE------------------  173 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS------------------
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC------------------
Confidence                              13578899999999999999999999999999999999997533                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                            ....+||+|||++.......  ...+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+....+.+
T Consensus       174 ------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  246 (494)
T 3lij_A          174 ------KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL  246 (494)
T ss_dssp             ------TTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             ------CCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                  23458899999886554332  34579999999999864 6999999999999999999999999998887776


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.......+.                                              ..+..+++.+.+||.+||++||
T Consensus       247 ~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~dp  280 (494)
T 3lij_A          247 RKVEKGKYTFDS----------------------------------------------PEWKNVSEGAKDLIKQMLQFDS  280 (494)
T ss_dssp             HHHHHTCCCCCS----------------------------------------------GGGTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHhCCCCCCc----------------------------------------------hhcccCCHHHHHHHHHHCCCCh
Confidence            666543222111                                              1123457789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCC
Q 015532          375 AERLKAREALRHPFFTR  391 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~  391 (405)
                      ++|||+.|+|+||||++
T Consensus       281 ~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          281 QRRISAQQALEHPWIKE  297 (494)
T ss_dssp             TTSCCHHHHHTCHHHHH
T ss_pred             hhCccHHHHhcCccccc
Confidence            99999999999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.3e-43  Score=351.63  Aligned_cols=229  Identities=26%  Similarity=0.344  Sum_probs=185.9

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      ....++|.+.+.||+|+||.||+|++..+|+.||||+++...    ...+.+.+|+.+++.+.|+++....         
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~   91 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI   91 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            334578999999999999999999999999999999996532    2345678999999999999984321         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.++                  
T Consensus        92 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~------------------  153 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM------------------  153 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC------------------
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC------------------
Confidence                              24578999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                               .+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....
T Consensus       154 ---------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~  224 (476)
T 2y94_A          154 ---------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL  224 (476)
T ss_dssp             ---------CEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH
T ss_pred             ---------CeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH
Confidence                     4566666666543322  234579999999999998775 6899999999999999999999988776655


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.......                                                  +...++++.+||.+||+.|
T Consensus       225 ~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~Li~~~L~~d  254 (476)
T 2y94_A          225 FKKICDGIFYT--------------------------------------------------PQYLNPSVISLLKHMLQVD  254 (476)
T ss_dssp             HHHHHTTCCCC--------------------------------------------------CTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCcCC--------------------------------------------------CccCCHHHHHHHHHHcCCC
Confidence            54443211111                                                  1234678999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~  393 (405)
                      |++|||++|+++||||++..
T Consensus       255 P~~Rpt~~eil~hp~~~~~~  274 (476)
T 2y94_A          255 PMKRATIKDIREHEWFKQDL  274 (476)
T ss_dssp             TTTSCCHHHHHTCHHHHTTC
T ss_pred             chhCcCHHHHHhCHHhhhcC
Confidence            99999999999999998754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.6e-43  Score=327.32  Aligned_cols=235  Identities=25%  Similarity=0.396  Sum_probs=190.4

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+++++.+.|+++....             
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            3567899999999999999999999999999999998653 23456788999999999999884321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++||+||||||+|||+..+                       
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-----------------------  142 (277)
T 3f3z_A           86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD-----------------------  142 (277)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-----------------------
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC-----------------------
Confidence                          2347889999999999999999999999999999999999332                       


Q ss_pred             CCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                       +.+..++|+|||++......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......+....+.
T Consensus       143 -~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  220 (277)
T 3f3z_A          143 -SPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIR  220 (277)
T ss_dssp             -STTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             -CCCCcEEEEecccceeccCccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence             13446788888877654332  233579999999999876 48999999999999999999999999888777666665


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ......|...                                              ...+++.+.+||.+||+.||++||
T Consensus       221 ~~~~~~~~~~----------------------------------------------~~~~~~~~~~li~~~l~~dp~~R~  254 (277)
T 3f3z_A          221 EGTFTFPEKD----------------------------------------------WLNVSPQAESLIRRLLTKSPKQRI  254 (277)
T ss_dssp             HCCCCCCHHH----------------------------------------------HTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             hCCCCCCchh----------------------------------------------hhcCCHHHHHHHHHHccCChhhCc
Confidence            5433333211                                              123467899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 ta~elL~hp~f~~~~~  394 (405)
                      |+.|+|+||||++...
T Consensus       255 s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          255 TSLQALEHEWFEKQLS  270 (277)
T ss_dssp             CHHHHTTSHHHHHHHC
T ss_pred             CHHHHhcCHHHhcccc
Confidence            9999999999987433

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.6e-43  Score=335.44  Aligned_cols=232  Identities=28%  Similarity=0.475  Sum_probs=164.0

Q ss_pred             CCCeEEE---eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh-hcCCCCCc------------
Q 015532           91 TPRYRIL---SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~---~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~-~~~~~~~~------------  154 (405)
                      .++|++.   +.||+|+||+||+|++..+++.||||++...  ......+|+.+++.+. |+++....            
T Consensus         7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv   84 (325)
T 3kn6_A            7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLV   84 (325)
T ss_dssp             HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEE
Confidence            3567775   7899999999999999999999999999653  3456778999999998 88874321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++.+++.++.||+.||.|||++||+||||||+|||++.++                     
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~---------------------  143 (325)
T 3kn6_A           85 MELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN---------------------  143 (325)
T ss_dssp             ECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-----------------------
T ss_pred             EEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC---------------------
Confidence                           23578999999999999999999999999999999999997643                     


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-----
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL-----  291 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~-----  291 (405)
                         ....+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+....     
T Consensus       144 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  220 (325)
T 3kn6_A          144 ---DNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS  220 (325)
T ss_dssp             -----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCC
T ss_pred             ---CcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccccc
Confidence               2335788888888654332   23357899999999999999999999999999999999999999764431     


Q ss_pred             --HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          292 --EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       292 --~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                        +.+..+.......                                              ....+..+++++.+||.+|
T Consensus       221 ~~~~~~~i~~~~~~~----------------------------------------------~~~~~~~~s~~~~~li~~~  254 (325)
T 3kn6_A          221 AVEIMKKIKKGDFSF----------------------------------------------EGEAWKNVSQEAKDLIQGL  254 (325)
T ss_dssp             HHHHHHHHTTTCCCC----------------------------------------------CSHHHHTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCC----------------------------------------------CcccccCCCHHHHHHHHHH
Confidence              1111111100000                                              0111234577899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      |+.||++|||++|+++||||++...
T Consensus       255 L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          255 LTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             HCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             CCCChhHCCCHHHHhcChhhccCcc
Confidence            9999999999999999999998644

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.7e-43  Score=331.15  Aligned_cols=237  Identities=25%  Similarity=0.364  Sum_probs=176.4

Q ss_pred             CccCCCeEEE-eeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHH-hhcCCCCCc----------
Q 015532           88 ENLTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRL-ARHDIGGTR----------  154 (405)
Q Consensus        88 ~~~~~~y~~~-~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l-~~~~~~~~~----------  154 (405)
                      ..+.++|++. +.||+|+||+||+|++..+++.||||+++... ...+.+.+|++++.++ .|+++....          
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~   87 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY   87 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            3467789996 78999999999999999999999999996543 3456788999999995 688874321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                  
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~------------------  149 (316)
T 2ac3_A           88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ------------------  149 (316)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS------------------
T ss_pred             EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC------------------
Confidence                             135788999999999999999999999999999999999976542                  


Q ss_pred             ccCCCCCCCceeccCCCCccccC----------CccceecCCCcchhHHHhC-----CCCCCchhHHHHHHHHHHHHhCC
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQ----------DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~~lltg~  282 (405)
                            ...+||+|||++.....          .....+||+.|+|||++.+     ..++.++|||||||++|+|++|.
T Consensus       150 ------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~  223 (316)
T 2ac3_A          150 ------VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY  223 (316)
T ss_dssp             ------SCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSS
T ss_pred             ------cCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCC
Confidence                  22367777777654321          1122469999999999975     45889999999999999999999


Q ss_pred             CCCCCCChHH---------------HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc
Q 015532          283 ALFQTHENLE---------------HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  347 (405)
Q Consensus       283 ~pf~~~~~~~---------------~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (405)
                      .||.+....+               ....+.......|                                          
T Consensus       224 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------------------------------------  261 (316)
T 2ac3_A          224 PPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP------------------------------------------  261 (316)
T ss_dssp             CSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCC------------------------------------------
T ss_pred             CCCcccccccccccccccchhHHHHHHHHHhccCcccC------------------------------------------
Confidence            9997654211               1111111000000                                          


Q ss_pred             hhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       348 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                          ......++..+.+||.+||+.||++|||++|+|+||||++...
T Consensus       262 ----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          262 ----DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             ----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             ----chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence                1111345778999999999999999999999999999997543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=6.5e-43  Score=329.52  Aligned_cols=261  Identities=26%  Similarity=0.437  Sum_probs=192.3

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      |..+.++|++.+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+.|+++....           
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   85 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT   85 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence            4567789999999999999999999999999999999986433 3456788999999999999885421           


Q ss_pred             ----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcc
Q 015532          155 ----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       155 ----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                                                  ...+++..++.++.||+.||.|||++||+||||||+|||++..         
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---------  156 (320)
T 2i6l_A           86 DDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE---------  156 (320)
T ss_dssp             C----CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT---------
T ss_pred             cccccccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC---------
Confidence                                        1346888999999999999999999999999999999999742         


Q ss_pred             ccccCCCCCCcccCCCCCCCceeccCCCCccccC------CccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHH
Q 015532          207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~ll  279 (405)
                                       +..+||+|||++.....      ......+|..|+|||++.+ ..++.++|||||||++|+|+
T Consensus       157 -----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~  219 (320)
T 2i6l_A          157 -----------------DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML  219 (320)
T ss_dssp             -----------------TTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHH
Confidence                             22456667776654322      1123467999999999876 57899999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       280 tg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                      +|..||.+....+.+..+....+................+....                  .  .............++
T Consensus       220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~--~~~~~~~~~~~~~~~  279 (320)
T 2i6l_A          220 TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND------------------M--TEPHKPLTQLLPGIS  279 (320)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHH------------------T--TSCCCCHHHHSTTCC
T ss_pred             hCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccc------------------c--cCCCCChhHhcchhh
Confidence            99999999988888877777665555433222211111111000                  0  000011112234567


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .++.+||.+||+.||++|||++|+|+||||+...
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          280 REAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             HHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            8999999999999999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=6.4e-43  Score=330.72  Aligned_cols=228  Identities=25%  Similarity=0.404  Sum_probs=183.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      .|...++||+|+||.||+|++..+|+.||||+++... ...+.+.+|+.+++.+.|+++....                 
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  125 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ  125 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence            4888899999999999999999999999999996533 3456688999999999999985321                 


Q ss_pred             ---------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          155 ---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       155 ---------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                               ...+++..+..++.||+.||.|||++||+||||||+|||++.++                           
T Consensus       126 ~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~---------------------------  178 (321)
T 2c30_A          126 GGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG---------------------------  178 (321)
T ss_dssp             SCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC---------------------------
T ss_pred             CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC---------------------------
Confidence                     13578999999999999999999999999999999999997655                           


Q ss_pred             CceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          226 AIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                      .+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+....+.....
T Consensus       179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  258 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP  258 (321)
T ss_dssp             CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC
T ss_pred             cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence            4566666665443322   2335799999999999998999999999999999999999999988776665544432110


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                      +.                                               .......++.+.+||.+||+.||++|||++|
T Consensus       259 ~~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  291 (321)
T 2c30_A          259 PK-----------------------------------------------LKNSHKVSPVLRDFLERMLVRDPQERATAQE  291 (321)
T ss_dssp             CC-----------------------------------------------CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CC-----------------------------------------------cCccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            00                                               0011234678999999999999999999999


Q ss_pred             HHcCCCCCCCCC
Q 015532          383 ALRHPFFTRDVR  394 (405)
Q Consensus       383 lL~hp~f~~~~~  394 (405)
                      +|+||||.+...
T Consensus       292 ll~hp~~~~~~~  303 (321)
T 2c30_A          292 LLDHPFLLQTGL  303 (321)
T ss_dssp             HHTSGGGGGCCC
T ss_pred             HhcChhhccCCC
Confidence            999999987643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.1e-43  Score=347.99  Aligned_cols=234  Identities=30%  Similarity=0.460  Sum_probs=178.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---------hhhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      +.++|.+.+.||+|+||+||+|.+..+++.||||++....         .....+.+|+.+|+++.|+++....      
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~  212 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE  212 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            4578999999999999999999999999999999996532         1122467899999999999985422      


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++..+                
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~----------------  276 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE----------------  276 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS----------------
T ss_pred             ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC----------------
Confidence                                24578999999999999999999999999999999999996543                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                              ....+||+|||++.......  ...+||+.|+|||++.+   ..|+.++|||||||++|+|++|..||....
T Consensus       277 --------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~  348 (419)
T 3i6u_A          277 --------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR  348 (419)
T ss_dssp             --------SSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred             --------CcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc
Confidence                    23458899999887654332  34689999999999864   468889999999999999999999997654


Q ss_pred             hHHHH-HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          290 NLEHL-AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       290 ~~~~~-~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ....+ ..+.......                                              ....+..+++.+.+||.+
T Consensus       349 ~~~~~~~~i~~~~~~~----------------------------------------------~~~~~~~~~~~~~~li~~  382 (419)
T 3i6u_A          349 TQVSLKDQITSGKYNF----------------------------------------------IPEVWAEVSEKALDLVKK  382 (419)
T ss_dssp             SSCCHHHHHHTTCCCC----------------------------------------------CHHHHTTSCHHHHHHHHH
T ss_pred             chHHHHHHHhcCCCCC----------------------------------------------CchhhcccCHHHHHHHHH
Confidence            32211 1111110000                                              011123457789999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ||++||++|||++|+|+||||++..
T Consensus       383 ~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          383 LLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             HSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             HccCChhHCcCHHHHhCCcccCChh
Confidence            9999999999999999999998753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.2e-43  Score=341.49  Aligned_cols=228  Identities=26%  Similarity=0.367  Sum_probs=181.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++.+.||+|+||+||+|+++.+++.||||++++..    ...+.+..|+.++..+.|+++....            
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  139 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV  139 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            478999999999999999999999999999999997532    2234577899999999998874321            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                   
T Consensus       140 mE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~-------------------  200 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH-------------------  200 (412)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC-------------------
T ss_pred             EcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCC-------------------
Confidence                            136889999999999999999999999999999999999977664                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHh-------CCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVIL-------GLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                              +||+|||++.......    ...+||+.|+|||++.       +..|+.++|||||||++|||++|..||.+
T Consensus       201 --------vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  272 (412)
T 2vd5_A          201 --------IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA  272 (412)
T ss_dssp             --------EEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             --------EEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence                    5556666554432221    2358999999999997       34689999999999999999999999998


Q ss_pred             CChHHHHHHHHHHh--CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          288 HENLEHLAMMERVL--GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       288 ~~~~~~~~~i~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      .+..+....+....  ...|                                               .....+++++++|
T Consensus       273 ~~~~~~~~~i~~~~~~~~~p-----------------------------------------------~~~~~~s~~~~dl  305 (412)
T 2vd5_A          273 DSTAETYGKIVHYKEHLSLP-----------------------------------------------LVDEGVPEEARDF  305 (412)
T ss_dssp             SSHHHHHHHHHTHHHHCCCC---------------------------------------------------CCCHHHHHH
T ss_pred             CCHHHHHHHHHhcccCcCCC-----------------------------------------------ccccCCCHHHHHH
Confidence            88777665554311  0111                                               0012457799999


Q ss_pred             HHHccccCCCCC---CCHHHHHcCCCCCCCC
Q 015532          366 LQGLLRYDPAER---LKAREALRHPFFTRDV  393 (405)
Q Consensus       366 l~~~L~~dP~~R---pta~elL~hp~f~~~~  393 (405)
                      |.+||. +|++|   ++++|+++||||+.-.
T Consensus       306 i~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~  335 (412)
T 2vd5_A          306 IQRLLC-PPETRLGRGGAGDFRTHPFFFGLD  335 (412)
T ss_dssp             HHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred             HHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence            999999 99998   5999999999998753

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.9e-43  Score=340.65  Aligned_cols=224  Identities=28%  Similarity=0.393  Sum_probs=174.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh----hhHHHHHHHHH-HHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDV-LQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~i-l~~l~~~~~~~~~------------  154 (405)
                      ++|++++.||+|+||.||+|+++.+++.||||++++...    .......|..+ ++.+.|+++....            
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            569999999999999999999999999999999975432    23345566666 4668888874321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                    
T Consensus       118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~--------------------  177 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH--------------------  177 (373)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--------------------
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC--------------------
Confidence                           135788999999999999999999999999999999999987665                    


Q ss_pred             CCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                             +||+|||++....   ......+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+..+....
T Consensus       178 -------ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~  250 (373)
T 2r5t_A          178 -------IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN  250 (373)
T ss_dssp             -------EEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH
T ss_pred             -------EEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence                   4555555554321   122346899999999999999999999999999999999999999998777666555


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....-                                                  .....++..+.+||.+||+.||++
T Consensus       251 i~~~~~--------------------------------------------------~~~~~~~~~~~~li~~lL~~dp~~  280 (373)
T 2r5t_A          251 ILNKPL--------------------------------------------------QLKPNITNSARHLLEGLLQKDRTK  280 (373)
T ss_dssp             HHHSCC--------------------------------------------------CCCSSSCHHHHHHHHHHTCSSGGG
T ss_pred             HHhccc--------------------------------------------------CCCCCCCHHHHHHHHHHcccCHHh
Confidence            433111                                                  111345678999999999999999


Q ss_pred             CCCH----HHHHcCCCCCCC
Q 015532          377 RLKA----REALRHPFFTRD  392 (405)
Q Consensus       377 Rpta----~elL~hp~f~~~  392 (405)
                      |+++    +++++||||+.-
T Consensus       281 R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          281 RLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             STTTTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCCHHHHhCCccccCC
Confidence            9986    699999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=8e-43  Score=331.96  Aligned_cols=230  Identities=29%  Similarity=0.399  Sum_probs=186.7

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      ....++|.+.+.||+|+||.||+|++..+++.||+|++...    ....+.+.+|+.+++.+.|+++....         
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  116 (335)
T 2owb_A           37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV  116 (335)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence            44567899999999999999999999999999999998653    23456788899999999999984421         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                 
T Consensus       117 ~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~-----------------  179 (335)
T 2owb_A          117 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-----------------  179 (335)
T ss_dssp             EEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC-----------------
T ss_pred             EEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCC-----------------
Confidence                              135788999999999999999999999999999999999976554                 


Q ss_pred             cccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                                ++|+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||......+.
T Consensus       180 ----------~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  249 (335)
T 2owb_A          180 ----------VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET  249 (335)
T ss_dssp             ----------EEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ----------EEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence                      56666666644321   12335789999999999998999999999999999999999999988776555


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+......                                                  ....+++.+.+||.+||+.|
T Consensus       250 ~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~d  279 (335)
T 2owb_A          250 YLRIKKNEYS--------------------------------------------------IPKHINPVAASLIQKMLQTD  279 (335)
T ss_dssp             HHHHHHTCCC--------------------------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCCC--------------------------------------------------CCccCCHHHHHHHHHHccCC
Confidence            4443321111                                                  11234668899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~  394 (405)
                      |++|||++|+|+||||+....
T Consensus       280 p~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          280 PTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             GGGSCCGGGGGGSHHHHTSCC
T ss_pred             hhHCcCHHHHhcCccccCCCc
Confidence            999999999999999987643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=6.8e-43  Score=334.11  Aligned_cols=229  Identities=26%  Similarity=0.371  Sum_probs=184.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..++|++.+.||+|+||+||+|++..+++.||||++...    ....+.+.+|+.+++.+.|+++....           
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            446799999999999999999999999999999998642    22345678999999999999985421           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                   
T Consensus       132 v~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-------------------  192 (348)
T 1u5q_A          132 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL-------------------  192 (348)
T ss_dssp             EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTE-------------------
T ss_pred             EEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC-------------------
Confidence                            235788999999999999999999999999999999999987654                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              +||+|||++...... ....||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus       193 --------~kL~DfG~a~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~  263 (348)
T 1u5q_A          193 --------VKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY  263 (348)
T ss_dssp             --------EEECCCTTCBSSSSB-CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred             --------EEEeeccCceecCCC-CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                    566666666544322 2357999999999996   4568999999999999999999999998877666554


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.....+.                                                .....+++.+.+||.+||+.||+
T Consensus       264 ~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~l~~dP~  295 (348)
T 1u5q_A          264 HIAQNESPA------------------------------------------------LQSGHWSEYFRNFVDSCLQKIPQ  295 (348)
T ss_dssp             HHHHSCCCC------------------------------------------------CCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHHhcCCCC------------------------------------------------CCCCCCCHHHHHHHHHHcccChh
Confidence            443211000                                                00123466899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~  394 (405)
                      +|||++++|+||||.....
T Consensus       296 ~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          296 DRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             GSCCHHHHTTCHHHHSCCC
T ss_pred             hCcCHHHHhhChhhhccCC
Confidence            9999999999999987643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=6.1e-43  Score=361.27  Aligned_cols=225  Identities=24%  Similarity=0.351  Sum_probs=183.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++++.||+|+||+||+|+++.+++.||||++++.    ....+....|..+|..+.+++++..+            
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            36799999999999999999999999999999999753    23446677899999988554432111            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||+|||++|||||||||+|||++.+|.                   
T Consensus       420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~-------------------  480 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH-------------------  480 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSC-------------------
T ss_pred             EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCc-------------------
Confidence                            145889999999999999999999999999999999999977664                   


Q ss_pred             cCCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              +||+|||+++...   ......+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+.+..+.+.
T Consensus       481 --------ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~  552 (674)
T 3pfq_A          481 --------IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ  552 (674)
T ss_dssp             --------EEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --------EEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH
Confidence                    5666666654321   12234689999999999999999999999999999999999999999988777666


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .|......+                                                  +..+++++.+||.+||+.||+
T Consensus       553 ~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~lL~~dP~  582 (674)
T 3pfq_A          553 SIMEHNVAY--------------------------------------------------PKSMSKEAVAICKGLMTKHPG  582 (674)
T ss_dssp             HHHSSCCCC--------------------------------------------------CTTSCHHHHHHHHHHSCSSST
T ss_pred             HHHhCCCCC--------------------------------------------------CccCCHHHHHHHHHHccCCHH
Confidence            554321111                                                  124577899999999999999


Q ss_pred             CCCCH-----HHHHcCCCCCCC
Q 015532          376 ERLKA-----REALRHPFFTRD  392 (405)
Q Consensus       376 ~Rpta-----~elL~hp~f~~~  392 (405)
                      +|+++     +||++||||+.-
T Consensus       583 ~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          583 KRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             TCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HCCCCCCCcHHHHhcCccccCC
Confidence            99997     999999999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.6e-43  Score=330.77  Aligned_cols=238  Identities=26%  Similarity=0.330  Sum_probs=170.4

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCcc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRY------------  155 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~~------------  155 (405)
                      +.++|++.+.||+|+||.||+|++..+++.||||+++..  ....+.+.+|+.+|+++.|+++.....            
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            446799999999999999999999999999999999642  334577889999999999999864210            


Q ss_pred             ---------------------------------------------------------------------------ccCCH
Q 015532          156 ---------------------------------------------------------------------------RSFPI  160 (405)
Q Consensus       156 ---------------------------------------------------------------------------~~l~~  160 (405)
                                                                                                 ...++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                                                       11244


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccC
Q 015532          161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ  240 (405)
Q Consensus       161 ~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  240 (405)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............        ...    .....
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~--------~~~----~~~~~  231 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV--------LTP----MPAYA  231 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccc--------ccc----ccccc
Confidence            468899999999999999999999999999999987776555555544332211100000        000    00001


Q ss_pred             CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCChHHHHHhhHhhHHh
Q 015532          241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV-LGPLPHHMVIRADRRAEKY  319 (405)
Q Consensus       241 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~-~g~~p~~~~~~~~~~~~~~  319 (405)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|..|+..     ....+... .+..|...           
T Consensus       232 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----------  295 (332)
T 3qd2_B          232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLKFPLLF-----------  295 (332)
T ss_dssp             CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTTCCCHHH-----------
T ss_pred             cccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhccCCCccc-----------
Confidence            11234799999999999999999999999999999999998766421     11111111 11111110           


Q ss_pred             hhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          320 FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                                                          ...++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       296 ------------------------------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          296 ------------------------------------TQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             ------------------------------------HHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             ------------------------------------ccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence                                                112457789999999999999999999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.7e-43  Score=334.53  Aligned_cols=234  Identities=26%  Similarity=0.401  Sum_probs=184.5

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch------hhhhHHHHHHHHHHHHHhhcCCCCCcc-------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRY-------  155 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~il~~l~~~~~~~~~~-------  155 (405)
                      .+.++|++.+.||+|+||+||+|++..+++.||||++...      ....+.+.+|+.+++.+.|+++.....       
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            4567899999999999999999999999999999998643      234467889999999999999843210       


Q ss_pred             ------------------------------------------------------------ccCCHHHHHHHHHHHHHHHH
Q 015532          156 ------------------------------------------------------------RSFPIDLVRELGRQLLESVA  175 (405)
Q Consensus       156 ------------------------------------------------------------~~l~~~~~~~~~~qi~~aL~  175 (405)
                                                                                  ..+++..++.++.||+.||.
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence                                                                        01246778899999999999


Q ss_pred             HHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccC-------CccceecC
Q 015532          176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVST  248 (405)
Q Consensus       176 ~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt  248 (405)
                      |||++||+||||||+|||++.++                         ...+||+|||++.....       ......||
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt  237 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTNK-------------------------SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT  237 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSS-------------------------SCCEEECCCTTCEEGGGTTCC--------CCC
T ss_pred             HHHHCCccccCCChhhEEEecCC-------------------------CceEEEeeccccccccccCccccccccccCCC
Confidence            99999999999999999997543                         23578888887764322       12335799


Q ss_pred             CCcchhHHHhC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcc
Q 015532          249 RHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL  326 (405)
Q Consensus       249 ~~y~aPE~~~~--~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  326 (405)
                      +.|+|||++.+  ..++.++|||||||++|+|++|..||.+....+....+.......+.                    
T Consensus       238 ~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------  297 (345)
T 3hko_A          238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN--------------------  297 (345)
T ss_dssp             GGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS--------------------
T ss_pred             ccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC--------------------
Confidence            99999999976  57899999999999999999999999988877666554432111110                    


Q ss_pred             cCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          327 DWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                                                .....+++.+.+||.+||+.||++|||+.|+|+||||++..
T Consensus       298 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          298 --------------------------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             --------------------------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             --------------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence                                      11123467899999999999999999999999999998754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=4.7e-42  Score=330.47  Aligned_cols=230  Identities=31%  Similarity=0.476  Sum_probs=182.4

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---------hhhHHHHHHHHHHHHH-hhcCCCCCc----
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRL-ARHDIGGTR----  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~il~~l-~~~~~~~~~----  154 (405)
                      .+.++|++.+.||+|+||.||+|++..+|+.||||+++...         ...+.+.+|+.+++.+ .|+++....    
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            45578999999999999999999999899999999986432         2245677899999999 688874321    


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..+..++.||+.||.|||++||+||||||+|||++.+|             
T Consensus       171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~-------------  237 (365)
T 2y7j_A          171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM-------------  237 (365)
T ss_dssp             BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-------------
T ss_pred             eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-------------
Confidence                                   13578899999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCC------CCCCchhHHHHHHHHHHHHhCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL------GWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~~lltg~~  283 (405)
                                    .++|+|||++......  .....||+.|+|||++.+.      .++.++|||||||++|+|++|..
T Consensus       238 --------------~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~  303 (365)
T 2y7j_A          238 --------------QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP  303 (365)
T ss_dssp             --------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence                          4566666665443322  2335799999999999743      58899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      ||........+..+.......+.                                              ..+...+..+.
T Consensus       304 pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~~  337 (365)
T 2y7j_A          304 PFWHRRQILMLRMIMEGQYQFSS----------------------------------------------PEWDDRSSTVK  337 (365)
T ss_dssp             SSCCSSHHHHHHHHHHTCCCCCH----------------------------------------------HHHSSSCHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCCCCC----------------------------------------------cccccCCHHHH
Confidence            99887766655544332111111                                              11134567899


Q ss_pred             HHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          364 DLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      +||.+||+.||++|||++|+|+||||++
T Consensus       338 ~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          338 DLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            9999999999999999999999999974

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=4.3e-43  Score=325.38  Aligned_cols=235  Identities=26%  Similarity=0.402  Sum_probs=188.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-------hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      +.++|++.+.||+|+||.||+|++..+++.||||+++...       ...+.+.+|+.+++.+.|+++....        
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence            3467999999999999999999999999999999986432       1356788999999999999884321        


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.||+.||.|||++||+||||||+||+++.++                 
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------------  145 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN-----------------  145 (283)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS-----------------
T ss_pred             EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC-----------------
Confidence                               13578999999999999999999999999999999999997654                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                            .....++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus       146 ------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  219 (283)
T 3bhy_A          146 ------VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET  219 (283)
T ss_dssp             ------SSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ------CCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH
Confidence                  123367888888886543322  235789999999999988999999999999999999999999998877665


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+.......+.                                              ......+..+.+||.+||..|
T Consensus       220 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~d  253 (283)
T 3bhy_A          220 LTNISAVNYDFDE----------------------------------------------EYFSNTSELAKDFIRRLLVKD  253 (283)
T ss_dssp             HHHHHTTCCCCCH----------------------------------------------HHHTTCCHHHHHHHHTTSCSS
T ss_pred             HHHhHhcccCCcc----------------------------------------------hhcccCCHHHHHHHHHHccCC
Confidence            5544332222111                                              111344678999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~  393 (405)
                      |++|||+.|+|+||||+.-.
T Consensus       254 p~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          254 PKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             GGGSCCHHHHHHCHHHHHHH
T ss_pred             HhHCcCHHHHHhCHHHHHHH
Confidence            99999999999999998643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=9.7e-43  Score=350.50  Aligned_cols=225  Identities=28%  Similarity=0.415  Sum_probs=180.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++.+.||+|+||.||+|+++.+++.||||++++..    .....+.+|+++|+.+.|++++...            
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999999999999999996532    2345678899999999999884321            


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                  
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~------------------  324 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH------------------  324 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC------------------
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCC------------------
Confidence                             123889999999999999999999999999999999999976654                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh----H
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN----L  291 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~----~  291 (405)
                               +||+|||++......  ....+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+...    .
T Consensus       325 ---------vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~  395 (576)
T 2acx_A          325 ---------IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE  395 (576)
T ss_dssp             ---------EEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH
T ss_pred             ---------eEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH
Confidence                     566666666544322  2335899999999999998999999999999999999999999987532    1


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .....+....                                                  ......+++++.+||.+||+
T Consensus       396 ~i~~~i~~~~--------------------------------------------------~~~p~~~s~~~~dLI~~lL~  425 (576)
T 2acx_A          396 EVERLVKEVP--------------------------------------------------EEYSERFSPQARSLCSQLLC  425 (576)
T ss_dssp             HHHHHHHHCC--------------------------------------------------CCCCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHhhccc--------------------------------------------------ccCCccCCHHHHHHHHHhcc
Confidence            1111111100                                                  01123457799999999999


Q ss_pred             cCCCCCC-----CHHHHHcCCCCCCC
Q 015532          372 YDPAERL-----KAREALRHPFFTRD  392 (405)
Q Consensus       372 ~dP~~Rp-----ta~elL~hp~f~~~  392 (405)
                      .||++|+     +++|+++||||+.-
T Consensus       426 ~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          426 KDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             SSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             CCHHHcCCCCCCCHHHHHhChhhccC
Confidence            9999999     89999999999873

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=9.4e-43  Score=326.77  Aligned_cols=236  Identities=25%  Similarity=0.393  Sum_probs=188.0

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-hhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .+.++|++.+.||+|+||.||+|++..+++.||||+++.... ..+.+.+|+.+++.+.|+++....             
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence            456789999999999999999999999999999999975432 345678899999999999884321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+||++...                       
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~-----------------------  142 (304)
T 2jam_A           86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP-----------------------  142 (304)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS-----------------------
T ss_pred             EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC-----------------------
Confidence                          1346889999999999999999999999999999999998421                       


Q ss_pred             CCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                       +.+..++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......+....+.+
T Consensus       143 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~  221 (304)
T 2jam_A          143 -EENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE  221 (304)
T ss_dssp             -STTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             -CCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence             13446788888877654432 2335799999999999998999999999999999999999999988777666555443


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .....+.                                              .....+++.+.+||.+||+.||++|||
T Consensus       222 ~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps  255 (304)
T 2jam_A          222 GYYEFES----------------------------------------------PFWDDISESAKDFICHLLEKDPNERYT  255 (304)
T ss_dssp             CCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHHHCSSTTTSCC
T ss_pred             CCCCCCc----------------------------------------------cccccCCHHHHHHHHHHcCCChhHCcC
Confidence            2211110                                              112345678999999999999999999


Q ss_pred             HHHHHcCCCCCCCCC
Q 015532          380 AREALRHPFFTRDVR  394 (405)
Q Consensus       380 a~elL~hp~f~~~~~  394 (405)
                      ++|+|+||||+....
T Consensus       256 ~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          256 CEKALSHPWIDGNTA  270 (304)
T ss_dssp             HHHHHTSHHHHSSCS
T ss_pred             HHHHhcCccccCCCc
Confidence            999999999987543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.6e-43  Score=335.38  Aligned_cols=222  Identities=28%  Similarity=0.447  Sum_probs=179.1

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---------hhHHHHHHHHHHHHHhhcCCCCCc-----
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------YREAAMIEIDVLQRLARHDIGGTR-----  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------~~~~~~~E~~il~~l~~~~~~~~~-----  154 (405)
                      .+.++|++.+.||+|+||+||+|++..+++.||||+++....         ..+.+.+|+.+++.+.|+++....     
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            356789999999999999999999999999999999975421         233566799999999999884321     


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..++.++.||+.||.|||++||+||||||+|||++.++             
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-------------  167 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF-------------  167 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-------------
T ss_pred             CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCC-------------
Confidence                                   23578999999999999999999999999999999999997654             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                                    .+||+|||++.......  ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||...
T Consensus       168 --------------~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  233 (335)
T 3dls_A          168 --------------TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL  233 (335)
T ss_dssp             --------------CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSG
T ss_pred             --------------cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhH
Confidence                          46777777775543322  34579999999999998876 78999999999999999999999652


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ...         .                                               .........+++++.+||.+
T Consensus       234 ~~~---------~-----------------------------------------------~~~~~~~~~~~~~l~~li~~  257 (335)
T 3dls_A          234 EET---------V-----------------------------------------------EAAIHPPYLVSKELMSLVSG  257 (335)
T ss_dssp             GGG---------T-----------------------------------------------TTCCCCSSCCCHHHHHHHHH
T ss_pred             HHH---------H-----------------------------------------------hhccCCCcccCHHHHHHHHH
Confidence            110         0                                               00001112356789999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ||+.||++|||++|+++||||++..
T Consensus       258 ~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          258 LLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             HTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             HccCChhhCcCHHHHhcCccccCCc
Confidence            9999999999999999999998754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=3.9e-42  Score=325.46  Aligned_cols=254  Identities=31%  Similarity=0.526  Sum_probs=192.6

Q ss_pred             cCCCeEEEeeeecccceeEEEEEec-CCCcEEEEEEecchh---hhhHHHHHHHHHHHHH---hhcCCCCCc--------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSIN---KYREAAMIEIDVLQRL---ARHDIGGTR--------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~-~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l---~~~~~~~~~--------  154 (405)
                      ..++|++.+.||+|+||.||+|++. .+++.||||+++...   .....+.+|+.+++.+   .|+++....        
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            4578999999999999999999995 678999999986432   2234566788888877   688874321        


Q ss_pred             -------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          155 -------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 -------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                               ...+++..++.++.||+.||.|||++||+||||||+|||++.++           
T Consensus        89 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~-----------  157 (326)
T 1blx_A           89 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----------  157 (326)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----------
T ss_pred             CCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC-----------
Confidence                                     12378999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                      .++|+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       158 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  221 (326)
T 1blx_A          158 ----------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  221 (326)
T ss_dssp             ----------------CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ----------------CEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence                            4566666666543322  2235789999999999998999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      ....+.+..+....+.++...                   |+........   ... .............++..+.+||.
T Consensus       222 ~~~~~~~~~i~~~~~~~~~~~-------------------~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~li~  278 (326)
T 1blx_A          222 SSDVDQLGKILDVIGLPGEED-------------------WPRDVALPRQ---AFH-SKSAQPIEKFVTDIDELGKDLLL  278 (326)
T ss_dssp             SSHHHHHHHHHHHHCCCCGGG-------------------SCTTCSSCGG---GSC-CCCCCCGGGTCCSCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCCccc-------------------Cccccccchh---hhc-ccCcchhhhccccCCHHHHHHHH
Confidence            998888888877776554321                   1111000000   000 00001112233456789999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +||+.||++|||+.|+|+||||++-.
T Consensus       279 ~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          279 KCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHcCCCcccCCCHHHHhcCccccccc
Confidence            99999999999999999999998754

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2e-42  Score=347.22  Aligned_cols=224  Identities=23%  Similarity=0.334  Sum_probs=179.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|+++.+++.||||++++..    ...+.+.+|+.+|+.+.|+++....             
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            67999999999999999999999999999999996532    2345678899999999999874311             


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.                 
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~-----------------  327 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-----------------  327 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC-----------------
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCC-----------------
Confidence                              125889999999999999999999999999999999999977664                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN---  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~---  290 (405)
                                +||+|||++......   ....+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+...   
T Consensus       328 ----------vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~  397 (543)
T 3c4z_A          328 ----------VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE  397 (543)
T ss_dssp             ----------EEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC
T ss_pred             ----------EEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh
Confidence                      566666665443322   1235899999999999999999999999999999999999999987532   


Q ss_pred             -HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          291 -LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       291 -~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                       .+....+.....                                                  ..+..+++.+.+||.+|
T Consensus       398 ~~~~~~~i~~~~~--------------------------------------------------~~p~~~s~~~~~li~~l  427 (543)
T 3c4z_A          398 NKELKQRVLEQAV--------------------------------------------------TYPDKFSPASKDFCEAL  427 (543)
T ss_dssp             HHHHHHHHHHCCC--------------------------------------------------CCCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHhhccc--------------------------------------------------CCCcccCHHHHHHHHHh
Confidence             222222211100                                                  11234577899999999


Q ss_pred             cccCCCCCCC-----HHHHHcCCCCCCC
Q 015532          370 LRYDPAERLK-----AREALRHPFFTRD  392 (405)
Q Consensus       370 L~~dP~~Rpt-----a~elL~hp~f~~~  392 (405)
                      |+.||++||+     ++++++||||+.-
T Consensus       428 L~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          428 LQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             SCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             ccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            9999999995     5899999999973

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.2e-42  Score=322.78  Aligned_cols=226  Identities=25%  Similarity=0.393  Sum_probs=183.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+.+++.+.|+++....             
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            67999999999999999999999999999999996432    2345678899999999999884321             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+||+++.++                      
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~----------------------  151 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG----------------------  151 (284)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC----------------------
T ss_pred             EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC----------------------
Confidence                          13578899999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                           .++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......+....+..
T Consensus       152 -----~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  226 (284)
T 2vgo_A          152 -----ELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN  226 (284)
T ss_dssp             -----CEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             -----CEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc
Confidence                 4566666665433322 2335789999999999998999999999999999999999999988776555443322


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ....                                                  .....+..+.+||.+||+.||++|||
T Consensus       227 ~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps  256 (284)
T 2vgo_A          227 VDLK--------------------------------------------------FPPFLSDGSKDLISKLLRYHPPQRLP  256 (284)
T ss_dssp             TCCC--------------------------------------------------CCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cccC--------------------------------------------------CCCcCCHHHHHHHHHHhhcCHhhCCC
Confidence            1111                                                  11234678999999999999999999


Q ss_pred             HHHHHcCCCCCCCCC
Q 015532          380 AREALRHPFFTRDVR  394 (405)
Q Consensus       380 a~elL~hp~f~~~~~  394 (405)
                      ++|+++||||+....
T Consensus       257 ~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          257 LKGVMEHPWVKANSR  271 (284)
T ss_dssp             HHHHHTCHHHHHHCC
T ss_pred             HHHHhhCHHHHhhcc
Confidence            999999999987544

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.9e-42  Score=327.38  Aligned_cols=234  Identities=30%  Similarity=0.442  Sum_probs=181.8

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---------hhhHHHHHHHHHHHHHhhcCCCCCc-----
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTR-----  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~il~~l~~~~~~~~~-----  154 (405)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++....         .....+.+|+.+++.+.|+++....     
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            45578999999999999999999999999999999986432         1224577899999999999884321     


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++               
T Consensus        87 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~---------------  151 (322)
T 2ycf_A           87 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE---------------  151 (322)
T ss_dssp             SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS---------------
T ss_pred             CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC---------------
Confidence                                 23578899999999999999999999999999999999997543               


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                               ....+||+|||++.......  ....||+.|+|||++.   +..++.++|||||||++|+|++|..||...
T Consensus       152 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  222 (322)
T 2ycf_A          152 ---------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  222 (322)
T ss_dssp             ---------SSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred             ---------CCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence                     23458899999887654432  2357999999999985   456889999999999999999999999765


Q ss_pred             ChHH-HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          289 ENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       289 ~~~~-~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .... ....+........                                              ......++..+.+||.
T Consensus       223 ~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~  256 (322)
T 2ycf_A          223 RTQVSLKDQITSGKYNFI----------------------------------------------PEVWAEVSEKALDLVK  256 (322)
T ss_dssp             TCSSCHHHHHHHTCCCCC----------------------------------------------HHHHTTSCHHHHHHHH
T ss_pred             chHHHHHHHHHhCccccC----------------------------------------------chhhhhcCHHHHHHHH
Confidence            4321 1111211100000                                              0112345678999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +||+.||++|||++|+|+||||+..
T Consensus       257 ~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          257 KLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             HHcccCHhhCCCHHHHhhCcCcCCH
Confidence            9999999999999999999999864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.5e-42  Score=328.62  Aligned_cols=227  Identities=30%  Similarity=0.460  Sum_probs=171.2

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhh--cCCCCCc----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLAR--HDIGGTR----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~--~~~~~~~----------  154 (405)
                      ..++|++.+.||+|+||.||+|.+ .+++.||||++....   ...+.+.+|+.+|+.+.|  +++....          
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            356799999999999999999998 468899999986432   334667889999999987  5553211          


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++.+++.++.||+.||.|||++||+||||||+|||++ ++                    
T Consensus        86 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~--------------------  144 (343)
T 3dbq_A           86 MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG--------------------  144 (343)
T ss_dssp             EEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TT--------------------
T ss_pred             EEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CC--------------------
Confidence                            23578899999999999999999999999999999999995 23                    


Q ss_pred             cCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhC-----------CCCCCchhHHHHHHHHHHHHhCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILG-----------LGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~~lltg~  282 (405)
                             .+||+|||++.......     ...+||+.|+|||++.+           ..++.++|||||||++|+|++|.
T Consensus       145 -------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~  217 (343)
T 3dbq_A          145 -------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK  217 (343)
T ss_dssp             -------EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSS
T ss_pred             -------cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence                   36777777776543222     23579999999999975           56889999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||.......  ..+.....+                   .....                          .....+..+
T Consensus       218 ~pf~~~~~~~--~~~~~~~~~-------------------~~~~~--------------------------~~~~~~~~l  250 (343)
T 3dbq_A          218 TPFQQIINQI--SKLHAIIDP-------------------NHEIE--------------------------FPDIPEKDL  250 (343)
T ss_dssp             CTTTTCCSHH--HHHHHHHCT-------------------TSCCC--------------------------CCCCSCHHH
T ss_pred             CcchhhhhHH--HHHHHHhcC-------------------CcccC--------------------------CcccCCHHH
Confidence            9997644321  111111100                   00111                          112335688


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      .+||.+||+.||++|||+.|+|+||||+..
T Consensus       251 ~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          251 QDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            999999999999999999999999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.7e-43  Score=322.60  Aligned_cols=226  Identities=25%  Similarity=0.395  Sum_probs=157.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+.+++.+.|+++....             
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            56999999999999999999999999999999996532    2236688899999999999884321             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+||+++.++                     
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~---------------------  149 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM---------------------  149 (278)
T ss_dssp             ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC---------------------
T ss_pred             ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC---------------------
Confidence                           14578999999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                            .++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||......+.+..
T Consensus       150 ------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  223 (278)
T 3cok_A          150 ------NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK  223 (278)
T ss_dssp             ------CEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----
T ss_pred             ------CEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH
Confidence                  4566666666543321   1235789999999999988899999999999999999999999976543222211


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +..                          .                        .......++.++.+||.+||+.||++
T Consensus       224 ~~~--------------------------~------------------------~~~~~~~~~~~~~~li~~~l~~dp~~  253 (278)
T 3cok_A          224 VVL--------------------------A------------------------DYEMPSFLSIEAKDLIHQLLRRNPAD  253 (278)
T ss_dssp             CCS--------------------------S------------------------CCCCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             Hhh--------------------------c------------------------ccCCccccCHHHHHHHHHHcccCHhh
Confidence            100                          0                        00112235678999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVR  394 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~  394 (405)
                      |||++++|+||||++...
T Consensus       254 Rps~~~~l~h~~~~~~~~  271 (278)
T 3cok_A          254 RLSLSSVLDHPFMSRNSS  271 (278)
T ss_dssp             SCCHHHHTTSTTTC----
T ss_pred             CCCHHHHhcCccccCCCC
Confidence            999999999999997653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.7e-41  Score=317.05  Aligned_cols=233  Identities=30%  Similarity=0.459  Sum_probs=183.5

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----------hhhHHHHHHHHHHHHHh-hcCCCCCc---
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLA-RHDIGGTR---  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----------~~~~~~~~E~~il~~l~-~~~~~~~~---  154 (405)
                      .+.++|++.+.||+|+||.||+|++..+++.||||+++...          ...+.+.+|+.+++++. |+++....   
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            45678999999999999999999999999999999996432          23466788999999996 88874321   


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++..+..++.||+.||.|||++||+||||||+||+++.++.           
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-----------  162 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-----------  162 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-----------
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCc-----------
Confidence                                    135788999999999999999999999999999999999976554           


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHh------CCCCCCchhHHHHHHHHHHHHhCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVIL------GLGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~~lltg~  282 (405)
                                      ++|+|||++......  .....||+.|+|||++.      ...++.++|||||||++|+|++|.
T Consensus       163 ----------------~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~  226 (298)
T 1phk_A          163 ----------------IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS  226 (298)
T ss_dssp             ----------------EEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------------EEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCC
Confidence                            566666665443222  22357899999999986      346889999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||...+.......+.......+.                                              .....++..+
T Consensus       227 ~p~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~l  260 (298)
T 1phk_A          227 PPFWHRKQMLMLRMIMSGNYQFGS----------------------------------------------PEWDDYSDTV  260 (298)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TTGGGSCHHH
T ss_pred             CCCcCccHHHHHHHHhcCCcccCc----------------------------------------------ccccccCHHH
Confidence            999887766655544332111110                                              1112356789


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .+||.+||+.||++|||+.|+|+||||++...
T Consensus       261 ~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             HHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence            99999999999999999999999999997643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=3.2e-42  Score=319.72  Aligned_cols=245  Identities=19%  Similarity=0.256  Sum_probs=179.4

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHH-hhcCCCCCc---------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTR---------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l-~~~~~~~~~---------  154 (405)
                      ..+.++|++.+.||+|+||+||+|++..+++.||||+++..   ......+.+|+.++..+ .|+++....         
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~   86 (289)
T 1x8b_A            7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM   86 (289)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred             ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence            34567899999999999999999999999999999999742   23456678899999999 888874321         


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+....... 
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~-  165 (289)
T 1x8b_A           87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD-  165 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred             EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccc-
Confidence                                  134789999999999999999999999999999999999987765544433211100 


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                             .......++|+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|+|++|.+++......
T Consensus       166 -------~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~  237 (289)
T 1x8b_A          166 -------WASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW  237 (289)
T ss_dssp             -----------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH
T ss_pred             -------ccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH
Confidence                   01245578999999987665433 34699999999999876 5668999999999999999999887543221


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      .   .+.+  +..                                               ......+++.+.+||.+||+
T Consensus       238 ~---~~~~--~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~  265 (289)
T 1x8b_A          238 H---EIRQ--GRL-----------------------------------------------PRIPQVLSQEFTELLKVMIH  265 (289)
T ss_dssp             H---HHHT--TCC-----------------------------------------------CCCSSCCCHHHHHHHHHHTC
T ss_pred             H---HHHc--CCC-----------------------------------------------CCCCcccCHHHHHHHHHHhC
Confidence            1   1110  000                                               01123457789999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .||++|||+.|+|+||||++..
T Consensus       266 ~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          266 PDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             SSGGGSCCHHHHHTCTTC----
T ss_pred             CCcccCCCHHHHhhChHhhhhc
Confidence            9999999999999999999764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=8.8e-43  Score=336.32  Aligned_cols=233  Identities=16%  Similarity=0.128  Sum_probs=166.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHh--hcCCCCCc------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLA--RHDIGGTR------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~--~~~~~~~~------------  154 (405)
                      .|++.+.||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.+++.|.  |+++....            
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred             eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence            499999999999999999999999999999999763    334556677877677765  88753310            


Q ss_pred             ---------------------c------------------ccCCHHHH------HHHHHHHHHHHHHHHHCCcEecCCCC
Q 015532          155 ---------------------Y------------------RSFPIDLV------RELGRQLLESVAFMHELRLIHTDLKP  189 (405)
Q Consensus       155 ---------------------~------------------~~l~~~~~------~~~~~qi~~aL~~LH~~givHrDlkp  189 (405)
                                           +                  ..+++..+      ..++.||+.||.|||++||+||||||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp  222 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTP  222 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCH
Confidence                                 0                  01223334      56779999999999999999999999


Q ss_pred             CcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC--CCCCCchh
Q 015532          190 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCD  267 (405)
Q Consensus       190 ~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  267 (405)
                      +|||++.+|                           .+||+|||++...........+|+.|+|||++.+  ..++.++|
T Consensus       223 ~NIll~~~~---------------------------~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~D  275 (371)
T 3q60_A          223 DNLFIMPDG---------------------------RLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALN  275 (371)
T ss_dssp             GGEEECTTS---------------------------CEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHH
T ss_pred             HHEEECCCC---------------------------CEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCcccc
Confidence            999997665                           4566666666554443334567799999999987  67999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc
Q 015532          268 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  347 (405)
Q Consensus       268 iwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (405)
                      ||||||++|+|++|..||.+.......                        .+.   ......              ...
T Consensus       276 iwSlG~il~elltg~~Pf~~~~~~~~~------------------------~~~---~~~~~~--------------~~~  314 (371)
T 3q60_A          276 AWQLGLSIYRVWCLFLPFGLVTPGIKG------------------------SWK---RPSLRV--------------PGT  314 (371)
T ss_dssp             HHHHHHHHHHHHHSSCSTTBCCTTCTT------------------------CCC---BCCTTS--------------CCC
T ss_pred             HHHHHHHHHHHHhCCCCCCCcCccccc------------------------chh---hhhhhh--------------ccc
Confidence            999999999999999999765321000                        000   000000              000


Q ss_pred             hhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       348 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ..........+++.+.+||.+||+.||++|||+.|+|+||||++-.
T Consensus       315 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          315 DSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             CSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             cccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence            0111112235678999999999999999999999999999998643

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3.4e-42  Score=321.38  Aligned_cols=230  Identities=29%  Similarity=0.399  Sum_probs=185.6

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      ....++|++.+.||+|+||.||+|++..+++.||+|++...    ....+.+.+|+.+++.+.|+++....         
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   90 (294)
T 2rku_A           11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV   90 (294)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEE
Confidence            34567899999999999999999999999999999998643    23456778899999999999984421         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                 
T Consensus        91 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-----------------  153 (294)
T 2rku_A           91 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-----------------  153 (294)
T ss_dssp             EEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC-----------------
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCC-----------------
Confidence                              135789999999999999999999999999999999999976554                 


Q ss_pred             cccCCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                                ++|+|||.+.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||......+.
T Consensus       154 ----------~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  223 (294)
T 2rku_A          154 ----------VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET  223 (294)
T ss_dssp             ----------EEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ----------EEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                      56666666544321   12235789999999999998899999999999999999999999988766554


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+......                                                  .....++.+.+||.+||+.|
T Consensus       224 ~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~~  253 (294)
T 2rku_A          224 YLRIKKNEYS--------------------------------------------------IPKHINPVAASLIQKMLQTD  253 (294)
T ss_dssp             HHHHHTTCCC--------------------------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHhhccCC--------------------------------------------------CccccCHHHHHHHHHHcccC
Confidence            4333221101                                                  11234668899999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~  394 (405)
                      |++|||++|+++||||+....
T Consensus       254 p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          254 PTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             GGGSCCGGGGGGSHHHHTSCC
T ss_pred             hhhCcCHHHHhhChheecCCc
Confidence            999999999999999987643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.6e-42  Score=323.65  Aligned_cols=228  Identities=25%  Similarity=0.447  Sum_probs=181.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      +.++|++.+.||+|+||.||+|.+..+++.||||+++...     ...+.+.+|+.+++.+.|+++....          
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            4578999999999999999999999999999999996532     3346788999999999999874311          


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..+..++.||+.||.|||++||+||||||+|||++.++.               
T Consensus        83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~---------------  147 (305)
T 2wtk_C           83 MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT---------------  147 (305)
T ss_dssp             EEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC---------------
T ss_pred             EEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCc---------------
Confidence                                134788899999999999999999999999999999999976654               


Q ss_pred             CCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCC--CCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                  ++|+|||.+.....     ......||+.|+|||++.+..  ++.++|||||||++|+|++|..||.+
T Consensus       148 ------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (305)
T 2wtk_C          148 ------------LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG  215 (305)
T ss_dssp             ------------EEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ------------EEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence                        55555555543321     112346899999999998754  37899999999999999999999998


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .+..+....+.....                                                  .....+++.+.+||.
T Consensus       216 ~~~~~~~~~i~~~~~--------------------------------------------------~~~~~~~~~l~~li~  245 (305)
T 2wtk_C          216 DNIYKLFENIGKGSY--------------------------------------------------AIPGDCGPPLSDLLK  245 (305)
T ss_dssp             SSHHHHHHHHHHCCC--------------------------------------------------CCCSSSCHHHHHHHH
T ss_pred             chHHHHHHHHhcCCC--------------------------------------------------CCCCccCHHHHHHHH
Confidence            776555544432111                                                  011244678999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      +||+.||++|||++|+++||||++...
T Consensus       246 ~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          246 GMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHccCChhhCCCHHHHhcCcccccCCC
Confidence            999999999999999999999987644

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=5.2e-42  Score=333.01  Aligned_cols=225  Identities=30%  Similarity=0.474  Sum_probs=171.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhh--cCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLAR--HDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~--~~~~~~~------------  154 (405)
                      .+|++.+.||+|+||+||+|.+.. ++.||||++...   ....+.+.+|+.+|+.+.|  +++....            
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            469999999999999999999865 889999999643   2345678899999999986  5553321            


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++.+++.++.||+.||.|||++||+||||||+|||++ ++                      
T Consensus       135 ~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~----------------------  191 (390)
T 2zmd_A          135 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG----------------------  191 (390)
T ss_dssp             EECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SS----------------------
T ss_pred             EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CC----------------------
Confidence                          13567889999999999999999999999999999999994 23                      


Q ss_pred             CCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhC-----------CCCCCchhHHHHHHHHHHHHhCCCC
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILG-----------LGWNYPCDLWSVGCILVELCSGEAL  284 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~~lltg~~p  284 (405)
                           .+||+|||++.......     ...+||+.|+|||++.+           ..++.++|||||||++|+|++|..|
T Consensus       192 -----~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~P  266 (390)
T 2zmd_A          192 -----MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP  266 (390)
T ss_dssp             -----CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             -----eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCc
Confidence                 46777777776543221     23579999999999976           3688999999999999999999999


Q ss_pred             CCCCChH-HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          285 FQTHENL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       285 f~~~~~~-~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      |...... ..+..+   ...                   .....+                          ....+..+.
T Consensus       267 f~~~~~~~~~~~~~---~~~-------------------~~~~~~--------------------------~~~~~~~~~  298 (390)
T 2zmd_A          267 FQQIINQISKLHAI---IDP-------------------NHEIEF--------------------------PDIPEKDLQ  298 (390)
T ss_dssp             TTTCCCHHHHHHHH---HCT-------------------TSCCCC--------------------------CCCSCHHHH
T ss_pred             chhhhHHHHHHHHH---hCc-------------------cccCCC--------------------------CccchHHHH
Confidence            9765432 222211   110                   001111                          122356889


Q ss_pred             HHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          364 DLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      +||.+||+.||++|||+.|+|+||||+...
T Consensus       299 ~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          299 DVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            999999999999999999999999998643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.3e-42  Score=327.07  Aligned_cols=232  Identities=22%  Similarity=0.303  Sum_probs=181.7

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      ...+.++|++.+.||+|+||.||+|++..+++.||||+++...    .....+.+|+.+++.+.|+++....        
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   86 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP   86 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC
Confidence            3456789999999999999999999999999999999996532    2345678899999999999985421        


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..++.++.||+.||.|||++||+||||||+|||++.++.            
T Consensus        87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~------------  154 (311)
T 3ork_A           87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA------------  154 (311)
T ss_dssp             TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSC------------
T ss_pred             CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCC------------
Confidence                                   134788999999999999999999999999999999999987664            


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                                     +||+|||++......      .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       155 ---------------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf  219 (311)
T 3ork_A          155 ---------------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF  219 (311)
T ss_dssp             ---------------EEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ---------------EEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence                           566666665433221      12256899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       286 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      .+....+....+..... .+.                                             ......++.++.+|
T Consensus       220 ~~~~~~~~~~~~~~~~~-~~~---------------------------------------------~~~~~~~~~~l~~l  253 (311)
T 3ork_A          220 TGDSPVSVAYQHVREDP-IPP---------------------------------------------SARHEGLSADLDAV  253 (311)
T ss_dssp             CCSSHHHHHHHHHHCCC-CCH---------------------------------------------HHHSTTCCHHHHHH
T ss_pred             CCCChHHHHHHHhcCCC-CCc---------------------------------------------ccccCCCCHHHHHH
Confidence            98877665544332211 111                                             01123457789999


Q ss_pred             HHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          366 LQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                      |.+||+.||++||++.++|.|+|++.
T Consensus       254 i~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          254 VLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            99999999999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=9.7e-43  Score=334.53  Aligned_cols=273  Identities=22%  Similarity=0.311  Sum_probs=187.5

Q ss_pred             eCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        86 ~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      .++...++|++.+.||+|+||+||+|++..+++.||+|+++..  ....+.+.+|+.+++.+.|+++....         
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  106 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI  106 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEE
Confidence            3455568899999999999999999999999999999999653  34456788999999999999884321         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                        ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++                 
T Consensus       107 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~-----------------  169 (360)
T 3eqc_A          107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-----------------  169 (360)
T ss_dssp             EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC-----------------
T ss_pred             EEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCC-----------------
Confidence                              13578889999999999999999985 999999999999997654                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccC-CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                                .++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+..
T Consensus       170 ----------~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  239 (360)
T 3eqc_A          170 ----------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE  239 (360)
T ss_dssp             ----------CEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHH
T ss_pred             ----------CEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                      467777777653321 223357999999999999999999999999999999999999999887765544


Q ss_pred             HHHHHHh-CCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          295 AMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       295 ~~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ..+.... +..+... ....... ..+... ................+.... .   .......++.++.+||.+||++|
T Consensus       240 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~li~~~L~~d  312 (360)
T 3eqc_A          240 LMFGCQVEGDAAETP-PRPRTPG-RPLNKF-GMDSRPPMAIFELLDYIVNEP-P---PKLPSGVFSLEFQDFVNKCLIKN  312 (360)
T ss_dssp             HHHC---------------------------------CCCHHHHHHHHHHSC-C---CCCCTTTSCHHHHHHHHHHHCSS
T ss_pred             HHhcccccccCCCCC-CCcccCC-Cccccc-ccCCCCcccchhhhhHHhccC-C---CCCCcccccHHHHHHHHHHhhcC
Confidence            3332111 1111100 0000000 000000 000000000011111111100 0   01112345778999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRD  392 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~  392 (405)
                      |++|||++|+|+||||++.
T Consensus       313 P~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          313 PAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             TTTSCCHHHHHTSHHHHHH
T ss_pred             hhhCCCHHHHhhChHhhcc
Confidence            9999999999999999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-41  Score=322.35  Aligned_cols=233  Identities=22%  Similarity=0.416  Sum_probs=180.7

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc-----------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR-----------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~-----------  154 (405)
                      .....++|++.+.||+|+||.||+|++..+++.||||++.......+.+.+|+.+++++ .|+++....           
T Consensus        19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   98 (326)
T 2x7f_A           19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   98 (326)
T ss_dssp             CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred             ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence            34467899999999999999999999999999999999976656667888999999999 677763210           


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++..++.++.||+.||.|||++||+||||||+|||++.++            
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~------------  166 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA------------  166 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC------------
T ss_pred             cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC------------
Confidence                                    13478889999999999999999999999999999999997655            


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg~  282 (405)
                                     .++|+|||++......   .....||+.|+|||++.     +..++.++|||||||++|+|++|.
T Consensus       167 ---------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  231 (326)
T 2x7f_A          167 ---------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA  231 (326)
T ss_dssp             ---------------CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCC
Confidence                           4566666666543321   22357899999999997     456889999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||.+......+..+....  .|.                                              .....++..+
T Consensus       232 ~p~~~~~~~~~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~l  263 (326)
T 2x7f_A          232 PPLCDMHPMRALFLIPRNP--APR----------------------------------------------LKSKKWSKKF  263 (326)
T ss_dssp             CTTTTSCHHHHHHHHHHSC--CCC----------------------------------------------CSCSCSCHHH
T ss_pred             CCCCCCcHHHHHHHhhcCc--ccc----------------------------------------------CCccccCHHH
Confidence            9998877655444332210  000                                              0012346789


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .+||.+||..||++|||++|+++||||++...
T Consensus       264 ~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          264 QSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             HHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence            99999999999999999999999999987644

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.5e-42  Score=319.09  Aligned_cols=231  Identities=26%  Similarity=0.345  Sum_probs=176.7

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      |....++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+.+++.+.|+++....        
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   85 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD   85 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe
Confidence            3445578999999999999999999999999999999996432    2345678899999999999884321        


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~----------------  149 (276)
T 2h6d_A           86 FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMN----------------  149 (276)
T ss_dssp             EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSC----------------
T ss_pred             EEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCC----------------
Confidence                               135788999999999999999999999999999999999976654                


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                                 ++|+|||++.......  ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.......
T Consensus       150 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  218 (276)
T 2h6d_A          150 -----------AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT  218 (276)
T ss_dssp             -----------EEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -----------EEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH
Confidence                       5566666554433221  23468999999999988765 589999999999999999999998876655


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.......                                                  ....+..+.+||.+||+.
T Consensus       219 ~~~~~~~~~~~~--------------------------------------------------~~~~~~~l~~li~~~l~~  248 (276)
T 2h6d_A          219 LFKKIRGGVFYI--------------------------------------------------PEYLNRSVATLLMHMLQV  248 (276)
T ss_dssp             HHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCS
T ss_pred             HHHHhhcCcccC--------------------------------------------------chhcCHHHHHHHHHHccC
Confidence            444433211111                                                  123456889999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      ||++|||++|+++||||++...
T Consensus       249 ~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          249 DPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             SGGGSCCHHHHHHSHHHHTTCC
T ss_pred             ChhhCCCHHHHHhChhhccCch
Confidence            9999999999999999988643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.2e-41  Score=314.33  Aligned_cols=230  Identities=22%  Similarity=0.379  Sum_probs=179.4

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...  ...+.+.+|+.+++.+.|+++....              
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            467999999999999999999999999999999986433  3456788999999999999874321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                      
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~----------------------  143 (276)
T 2yex_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN----------------------  143 (276)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC----------------------
T ss_pred             ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCC----------------------
Confidence                         135789999999999999999999999999999999999976554                      


Q ss_pred             CCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCChHHH-H
Q 015532          222 PKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEH-L  294 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~~~~-~  294 (405)
                           ++|+|||.+.....     ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||........ .
T Consensus       144 -----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  218 (276)
T 2yex_A          144 -----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY  218 (276)
T ss_dssp             -----EEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH
T ss_pred             -----EEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence                 56666666543221     1223578999999999988765 6789999999999999999999987543211 1


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.....                                                ........++.+.+||.+||+.||
T Consensus       219 ~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p  250 (276)
T 2yex_A          219 SDWKEKKT------------------------------------------------YLNPWKKIDSAPLALLHKILVENP  250 (276)
T ss_dssp             HHHHTTCT------------------------------------------------TSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             HHhhhccc------------------------------------------------ccCchhhcCHHHHHHHHHHCCCCc
Confidence            11110000                                                000112356789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~  395 (405)
                      ++|||++|+++||||++....
T Consensus       251 ~~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          251 SARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             TTSCCHHHHTTCTTTTCCCC-
T ss_pred             hhCCCHHHHhcCccccChhhc
Confidence            999999999999999986543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-41  Score=320.17  Aligned_cols=255  Identities=20%  Similarity=0.308  Sum_probs=181.4

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..+.++|++.+.||+|+||+||+|++..+++.||||+++...  ...+.+.+|+++++.+.|+++....           
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence            345678999999999999999999999999999999997533  3346678999999999999874321           


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||+....               
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~---------------  149 (319)
T 4euu_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE---------------  149 (319)
T ss_dssp             EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECT---------------
T ss_pred             EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccC---------------
Confidence                                 01288999999999999999999999999999999999983221               


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHh--------CCCCCCchhHHHHHHHHHHHHhCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVIL--------GLGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~--------~~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                              +....+||+|||++.......  ....||+.|+|||++.        +..++.++|||||||++|+|++|..
T Consensus       150 --------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~  221 (319)
T 4euu_A          150 --------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL  221 (319)
T ss_dssp             --------TSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             --------CCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                    123457888888886544332  3357999999999987        4678999999999999999999999


Q ss_pred             CCCCCChH-HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          284 LFQTHENL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       284 pf~~~~~~-~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      ||...... .....+.++....|...+.....      .......|....                ..........+..+
T Consensus       222 pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~~~~~~~~~~----------------~~~~~~~~~~~~~l  279 (319)
T 4euu_A          222 PFRPFEGPRRNKEVMYKIITGKPSGAISGVQK------AENGPIDWSGDM----------------PVSCSLSRGLQVLL  279 (319)
T ss_dssp             SEECTTCGGGCHHHHHHHHHHCCTTCCEEEEC------STTCCEEEESSC----------------CTTCSSCHHHHHHH
T ss_pred             CCCCCCccchhHHHHHHHhcCCCcccchhhhc------ccCCccccCccC----------------CcccccchhHHHHh
Confidence            99754321 11222222222222110000000      000001110000                00001122346688


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHP  387 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp  387 (405)
                      .+||.+||++||++|||++|+|+||
T Consensus       280 ~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          280 TPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHHHHHhccCChhhhccHHHhhhcc
Confidence            9999999999999999999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.9e-41  Score=315.61  Aligned_cols=227  Identities=22%  Similarity=0.401  Sum_probs=177.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ..|++.+.||+|+||.||+|.+..++..||+|++...   ....+.+.+|+.+++.+.|+++....              
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            4589999999999999999999999999999998643   23456678899999999999885321              


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                       ...+++..++.++.||+.||.|||++|  |+||||||+|||++.                   
T Consensus       106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~-------------------  166 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-------------------  166 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS-------------------
T ss_pred             EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC-------------------
Confidence                             135788899999999999999999999  999999999999962                   


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCc-cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                             .+..++|+|||++....... ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.........
T Consensus       167 -------~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~  238 (290)
T 1t4h_A          167 -------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI  238 (290)
T ss_dssp             -------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH
T ss_pred             -------CCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH
Confidence                   22356777777775443332 23579999999998875 5899999999999999999999999876554433


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ...... +..+                                              .......++.+.+||.+||+.||
T Consensus       239 ~~~~~~-~~~~----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp  271 (290)
T 1t4h_A          239 YRRVTS-GVKP----------------------------------------------ASFDKVAIPEVKEIIEGCIRQNK  271 (290)
T ss_dssp             HHHHTT-TCCC----------------------------------------------GGGGGCCCHHHHHHHHHHSCSSG
T ss_pred             HHHHhc-cCCc----------------------------------------------cccCCCCCHHHHHHHHHHccCCh
Confidence            221110 0000                                              01112345689999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRD  392 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~  392 (405)
                      ++|||++|+|+||||+++
T Consensus       272 ~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          272 DERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             GGSCCHHHHHTSGGGC--
T ss_pred             hhCCCHHHHhhCcccccC
Confidence            999999999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.1e-41  Score=318.92  Aligned_cols=238  Identities=26%  Similarity=0.424  Sum_probs=183.6

Q ss_pred             EeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        84 ~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      +..+....++|++.+.||+|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++.+.|+++....        
T Consensus        11 ~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   90 (302)
T 2j7t_A           11 VRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK   90 (302)
T ss_dssp             CBSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-C
T ss_pred             cccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCe
Confidence            3344556789999999999999999999999999999999986533 3456788999999999999884321        


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..+..++.||+.||.|||++||+||||||+||+++.++.               
T Consensus        91 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~---------------  155 (302)
T 2j7t_A           91 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---------------  155 (302)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSC---------------
T ss_pred             EEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCC---------------
Confidence                                245789999999999999999999999999999999999976654               


Q ss_pred             CCcccCCCCCCCceeccCCCCcccc---CCccceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                  ++|+|||++....   .......||+.|+|||++.     +..++.++|||||||++|+|++|..||.
T Consensus       156 ------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  223 (302)
T 2j7t_A          156 ------------IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH  223 (302)
T ss_dssp             ------------EEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ------------EEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCc
Confidence                        5555555543211   1122347899999999984     5678999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      ..+.......+.....+.                                               ......++..+.+||
T Consensus       224 ~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~l~~li  256 (302)
T 2j7t_A          224 ELNPMRVLLKIAKSDPPT-----------------------------------------------LLTPSKWSVEFRDFL  256 (302)
T ss_dssp             TSCHHHHHHHHHHSCCCC-----------------------------------------------CSSGGGSCHHHHHHH
T ss_pred             cCCHHHHHHHHhccCCcc-----------------------------------------------cCCccccCHHHHHHH
Confidence            877665544433211000                                               001123466899999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~~~~  395 (405)
                      .+||+.||++|||+.|+++||||+.....
T Consensus       257 ~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  285 (302)
T 2j7t_A          257 KIALDKNPETRPSAAQLLEHPFVSSITSN  285 (302)
T ss_dssp             HHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred             HHHcccChhhCCCHHHHhcChHHhhhccc
Confidence            99999999999999999999999986543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.3e-41  Score=317.61  Aligned_cols=231  Identities=24%  Similarity=0.364  Sum_probs=177.7

Q ss_pred             eCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc----hhhhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        86 ~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      .|+.+.++|++.+.||+|+||.||+|++..+++.||||++..    .....+.+.+|+.+++.+.|+++....       
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~   84 (294)
T 4eqm_A            5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD   84 (294)
T ss_dssp             CSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS
T ss_pred             hhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC
Confidence            567788999999999999999999999999999999999843    223446778999999999999984321       


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++                
T Consensus        85 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~----------------  148 (294)
T 4eqm_A           85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK----------------  148 (294)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS----------------
T ss_pred             eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC----------------
Confidence                                13578999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                 .+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       149 -----------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~  217 (294)
T 4eqm_A          149 -----------TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA  217 (294)
T ss_dssp             -----------CEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH
T ss_pred             -----------CEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence                       4666666666543322    1235799999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+......  ....|                                           .........+++.+.++|.+||
T Consensus       218 ~~~~~~~~--~~~~~-------------------------------------------~~~~~~~~~~~~~l~~li~~~l  252 (294)
T 4eqm_A          218 VSIAIKHI--QDSVP-------------------------------------------NVTTDVRKDIPQSLSNVILRAT  252 (294)
T ss_dssp             HHHHHHHH--SSCCC-------------------------------------------CHHHHSCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHh--hccCC-------------------------------------------CcchhcccCCCHHHHHHHHHHh
Confidence            55432221  11111                                           1111223456778999999999


Q ss_pred             ccCCCCCCCHHHHHcCCC
Q 015532          371 RYDPAERLKAREALRHPF  388 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~  388 (405)
                      +.||++||+..+.+.+.|
T Consensus       253 ~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          253 EKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             CSSGGGSCSSHHHHHHHH
T ss_pred             cCCHhHccccHHHHHHHH
Confidence            999999995555554444

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3.2e-43  Score=340.18  Aligned_cols=219  Identities=19%  Similarity=0.265  Sum_probs=167.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHH---HHHHHhhcCCCCC----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEID---VLQRLARHDIGGT----------  153 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~---il~~l~~~~~~~~----------  153 (405)
                      .++|++.+.||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.   +|+.+.|++++..          
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46899999999999999999999999999999998632    234567788994   4555567765210          


Q ss_pred             -----------------------cc-----------------ccCC-------HHHHHHHHHHHHHHHHHHHHCCcEecC
Q 015532          154 -----------------------RY-----------------RSFP-------IDLVRELGRQLLESVAFMHELRLIHTD  186 (405)
Q Consensus       154 -----------------------~~-----------------~~l~-------~~~~~~~~~qi~~aL~~LH~~givHrD  186 (405)
                                             .+                 ..++       +..+..++.||+.||.|||++||+|||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  231 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  231 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence                                   00                 1123       367778999999999999999999999


Q ss_pred             CCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC------
Q 015532          187 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL------  260 (405)
Q Consensus       187 lkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~------  260 (405)
                      |||+|||++.++                           .+||+|||++..........+| +.|+|||++.+.      
T Consensus       232 ikp~NIll~~~~---------------------------~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~  283 (377)
T 3byv_A          232 LRPVDIVLDQRG---------------------------GVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYH  283 (377)
T ss_dssp             CCGGGEEECTTC---------------------------CEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHH
T ss_pred             CCHHHEEEcCCC---------------------------CEEEEechhheecCCcccCCCC-cCccChhhhccccccccc
Confidence            999999997655                           4666666666654444445678 999999999987      


Q ss_pred             -----CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCch
Q 015532          261 -----GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR  335 (405)
Q Consensus       261 -----~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (405)
                           .++.++|||||||++|+|++|..||.+........                                        
T Consensus       284 ~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~----------------------------------------  323 (377)
T 3byv_A          284 RDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE----------------------------------------  323 (377)
T ss_dssp             HCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG----------------------------------------
T ss_pred             ccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh----------------------------------------
Confidence                 79999999999999999999999996543211110                                        


Q ss_pred             hhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                                    ........+++.+.+||.+||+.||++|||+.|+|+||||++
T Consensus       324 --------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          324 --------------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             --------------GGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             --------------hhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence                          001112345778999999999999999999999999999975

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=6.4e-42  Score=318.47  Aligned_cols=235  Identities=31%  Similarity=0.543  Sum_probs=188.1

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||++....   ...+.+.+|+++++++.|+++....          
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence            345678999999999999999999999999999999986432   3456788999999999999874321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+||+++.++                   
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~-------------------  158 (287)
T 2wei_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE-------------------  158 (287)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS-------------------
T ss_pred             EEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC-------------------
Confidence                             13578899999999999999999999999999999999997543                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                           ....+||+|||++.......  ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+...
T Consensus       159 -----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~  232 (287)
T 2wei_A          159 -----KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK  232 (287)
T ss_dssp             -----TTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             -----CcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                 23457888888776543322  23468999999999876 58999999999999999999999999877766555


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.......+                                              ......+++.+.+||.+||+.||+
T Consensus       233 ~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~dp~  266 (287)
T 2wei_A          233 RVETGKYAFD----------------------------------------------LPQWRTISDDAKDLIRKMLTFHPS  266 (287)
T ss_dssp             HHHHCCCCCC----------------------------------------------SGGGTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCCCC----------------------------------------------chhhhhcCHHHHHHHHHHcccChh
Confidence            4433111100                                              011134567899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDV  393 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~  393 (405)
                      +|||+.|+|+||||++..
T Consensus       267 ~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          267 LRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             GSCCHHHHHHSHHHHHHC
T ss_pred             hCcCHHHHhcCHHHhccc
Confidence            999999999999998643

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=7.8e-42  Score=317.91  Aligned_cols=229  Identities=21%  Similarity=0.361  Sum_probs=166.2

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---hhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ..++|++.+.||+|+||+||+|++..+++.||||+++....   ..+....+...++.+.|+++....            
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            34789999999999999999999999999999999965322   222333444557778888874321            


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                        ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++                 
T Consensus        85 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-----------------  147 (290)
T 3fme_A           85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-----------------  147 (290)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTC-----------------
T ss_pred             EehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-----------------
Confidence                              13588999999999999999999998 999999999999997655                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHH----hCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                .+||+|||++.......  ....||+.|+|||++    .+..++.++|||||||++|+|++|..||....
T Consensus       148 ----------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  217 (290)
T 3fme_A          148 ----------QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG  217 (290)
T ss_dssp             ----------CEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred             ----------CEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC
Confidence                      46666676665433222  224789999999997    45568899999999999999999999998633


Q ss_pred             -hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          290 -NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       290 -~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                       ....+..+.....  +                     .                         ......++++.+||.+
T Consensus       218 ~~~~~~~~~~~~~~--~---------------------~-------------------------~~~~~~~~~~~~li~~  249 (290)
T 3fme_A          218 TPFQQLKQVVEEPS--P---------------------Q-------------------------LPADKFSAEFVDFTSQ  249 (290)
T ss_dssp             CHHHHHHHHHHSCC--C---------------------C-------------------------CCTTTSCHHHHHHHHH
T ss_pred             chHHHHHHHhccCC--C---------------------C-------------------------cccccCCHHHHHHHHH
Confidence             3333322211100  0                     0                         0012356789999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ||+.||++|||+.|+++||||+...
T Consensus       250 ~l~~~p~~Rpt~~e~l~hp~f~~~~  274 (290)
T 3fme_A          250 CLKKNSKERPTYPELMQHPFFTLHE  274 (290)
T ss_dssp             HTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HhhcChhhCcCHHHHHhCcccccCc
Confidence            9999999999999999999998643

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=2.2e-41  Score=317.16  Aligned_cols=232  Identities=26%  Similarity=0.409  Sum_probs=186.2

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ..++|++.+.||+|+||.||+|++..+++.||||++...  ....+.+.+|+.+++.+.|+++....             
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            346799999999999999999999999999999999643  23456788999999999999874321             


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++.++                       
T Consensus       100 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----------------------  156 (303)
T 3a7i_A          100 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----------------------  156 (303)
T ss_dssp             ECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------------------
T ss_pred             EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCC-----------------------
Confidence                         13578999999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          .++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...........+.
T Consensus       157 ----~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  232 (303)
T 3a7i_A          157 ----EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP  232 (303)
T ss_dssp             ----CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             ----CEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh
Confidence                4566666666443322   233578999999999999899999999999999999999999998876655444332


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ...  .                                               ......++..+.+||.+||+.||++||
T Consensus       233 ~~~--~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rp  263 (303)
T 3a7i_A          233 KNN--P-----------------------------------------------PTLEGNYSKPLKEFVEACLNKEPSFRP  263 (303)
T ss_dssp             HSC--C-----------------------------------------------CCCCSSCCHHHHHHHHHHCCSSGGGSC
T ss_pred             cCC--C-----------------------------------------------CCCccccCHHHHHHHHHHcCCChhhCc
Confidence            210  0                                               011134567899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCCCCc
Q 015532          379 KAREALRHPFFTRDVRRPT  397 (405)
Q Consensus       379 ta~elL~hp~f~~~~~~~~  397 (405)
                      |+.|+++||||........
T Consensus       264 s~~~ll~~~~~~~~~~~~~  282 (303)
T 3a7i_A          264 TAKELLKHKFILRNAKKTS  282 (303)
T ss_dssp             CHHHHTTCHHHHHHCCCGG
T ss_pred             CHHHHhhChhhhcCCCccH
Confidence            9999999999987654433

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.5e-41  Score=318.41  Aligned_cols=232  Identities=25%  Similarity=0.441  Sum_probs=179.0

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ....++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+.+++.+.|+++....             
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence            345678999999999999999999999999999999997543 346688999999999999884321             


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.                    
T Consensus       104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--------------------  163 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH--------------------  163 (314)
T ss_dssp             ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--------------------
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCC--------------------
Confidence                           235788999999999999999999999999999999999976554                    


Q ss_pred             CCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                             ++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       164 -------~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  236 (314)
T 3com_A          164 -------AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM  236 (314)
T ss_dssp             -------EEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             -------EEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                   566666666443222   2235789999999999998999999999999999999999999988766554433


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.....+                                               .......++..+.+||.+||..||++
T Consensus       237 ~~~~~~~-----------------------------------------------~~~~~~~~~~~l~~li~~~l~~dp~~  269 (314)
T 3com_A          237 IPTNPPP-----------------------------------------------TFRKPELWSDNFTDFVKQCLVKSPEQ  269 (314)
T ss_dssp             HHHSCCC-----------------------------------------------CCSSGGGSCHHHHHHHHHHTCSCTTT
T ss_pred             HhcCCCc-----------------------------------------------ccCCcccCCHHHHHHHHHHccCChhh
Confidence            2221000                                               00011234678999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVR  394 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~  394 (405)
                      |||+.++|+||||+....
T Consensus       270 Rpt~~~ll~~~~~~~~~~  287 (314)
T 3com_A          270 RATATQLLQHPFVRSAKG  287 (314)
T ss_dssp             SCCHHHHTTSHHHHTCCC
T ss_pred             CcCHHHHHhCHHHhcCCc
Confidence            999999999999998653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=5.8e-42  Score=323.99  Aligned_cols=230  Identities=25%  Similarity=0.365  Sum_probs=177.0

Q ss_pred             CceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-------hhHHHHHHHHHHHHHhh--cCCC
Q 015532           81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLAR--HDIG  151 (405)
Q Consensus        81 ~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~il~~l~~--~~~~  151 (405)
                      ..+...++.+.++|++.+.||+|+||.||+|++..+++.||||+++....       ..+.+.+|+.+++++.+  +++.
T Consensus        32 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~  111 (320)
T 3a99_A           32 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI  111 (320)
T ss_dssp             --------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBC
T ss_pred             cCcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCce
Confidence            34456677888999999999999999999999999999999999965431       22456679999999975  6653


Q ss_pred             CCc----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe-ccccccc
Q 015532          152 GTR----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKV  202 (405)
Q Consensus       152 ~~~----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~-~~~~~k~  202 (405)
                      ...                            ...+++..++.++.||+.||.|||++||+||||||+|||++ .++    
T Consensus       112 ~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~----  187 (320)
T 3a99_A          112 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG----  187 (320)
T ss_dssp             CEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT----
T ss_pred             EEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCC----
Confidence            211                            13578899999999999999999999999999999999997 334    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHh
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCS  280 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~llt  280 (405)
                                             .+||+|||++...... .....||+.|+|||++.+..+ +.++|||||||++|+|++
T Consensus       188 -----------------------~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~  244 (320)
T 3a99_A          188 -----------------------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC  244 (320)
T ss_dssp             -----------------------EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------------CEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHH
Confidence                                   4677777766544332 223578999999999987765 688999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.....      +..  +.                      .                          .....+++
T Consensus       245 g~~pf~~~~~------~~~--~~----------------------~--------------------------~~~~~~~~  268 (320)
T 3a99_A          245 GDIPFEHDEE------IIR--GQ----------------------V--------------------------FFRQRVSS  268 (320)
T ss_dssp             SSCSCCSHHH------HHH--CC----------------------C--------------------------CCSSCCCH
T ss_pred             CCCCCCChhh------hhc--cc----------------------c--------------------------cccccCCH
Confidence            9999965311      000  00                      0                          01124567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ++.+||.+||+.||++|||++|+++||||++..
T Consensus       269 ~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          269 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            899999999999999999999999999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-41  Score=324.77  Aligned_cols=227  Identities=27%  Similarity=0.382  Sum_probs=171.5

Q ss_pred             CCeEEEeeeecccceeEEEEEec---CCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHh-hcCCCCCc--------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTR--------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~-~~~~~~~~--------  154 (405)
                      ++|++.+.||+|+||.||+|++.   .+++.||||+++...     ...+.+.+|+++++.+. |+++....        
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            68999999999999999999984   478999999986432     23455678999999995 66663211        


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~----------------  197 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH----------------  197 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC----------------
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCc----------------
Confidence                               135788999999999999999999999999999999999976654                


Q ss_pred             CcccCCCCCCCceeccCCCCccccC----CccceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQ----DHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                 +||+|||++.....    .....+||+.|+|||++.+.  .++.++|||||||++|+|++|..||....
T Consensus       198 -----------~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~  266 (355)
T 1vzo_A          198 -----------VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG  266 (355)
T ss_dssp             -----------EEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTT
T ss_pred             -----------EEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCC
Confidence                       55566665543221    11235799999999999863  47899999999999999999999997543


Q ss_pred             hHHHHHHHHH-HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          290 NLEHLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       290 ~~~~~~~i~~-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      .......+.+ ....                                               .......++..+.+||.+
T Consensus       267 ~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~li~~  299 (355)
T 1vzo_A          267 EKNSQAEISRRILKS-----------------------------------------------EPPYPQEMSALAKDLIQR  299 (355)
T ss_dssp             SCCCHHHHHHHHHHC-----------------------------------------------CCCCCTTSCHHHHHHHHH
T ss_pred             ccchHHHHHHHHhcc-----------------------------------------------CCCCCcccCHHHHHHHHH
Confidence            2111111111 0000                                               001123456788999999


Q ss_pred             ccccCCCCCC-----CHHHHHcCCCCCCC
Q 015532          369 LLRYDPAERL-----KAREALRHPFFTRD  392 (405)
Q Consensus       369 ~L~~dP~~Rp-----ta~elL~hp~f~~~  392 (405)
                      ||+.||++||     |++|+++||||+..
T Consensus       300 ~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          300 LLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            9999999999     99999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=5e-41  Score=317.64  Aligned_cols=235  Identities=17%  Similarity=0.258  Sum_probs=163.9

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCc---EEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCcc--------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRY--------  155 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~---~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~~--------  155 (405)
                      ..++|++.+.||+|+||+||+|++..+++   .||||+++..   ....+.+.+|+.+++.+.|+++.....        
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            45789999999999999999999887765   7999998653   234567889999999999998743210        


Q ss_pred             -------------------------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCC
Q 015532          156 -------------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  204 (405)
Q Consensus       156 -------------------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~d  204 (405)
                                                     ..+++..++.++.||+.||.|||++||+||||||+|||++.++      
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~------  174 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM------  174 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS------
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC------
Confidence                                           1478889999999999999999999999999999999997655      


Q ss_pred             ccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHH
Q 015532          205 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       205 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~ll  279 (405)
                                           .+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|+|+
T Consensus       175 ---------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  233 (323)
T 3qup_A          175 ---------------------TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM  233 (323)
T ss_dssp             ---------------------CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             ---------------------CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHH
Confidence                                 45666666665432221     1235678899999999999999999999999999999


Q ss_pred             h-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCc
Q 015532          280 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  358 (405)
Q Consensus       280 t-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (405)
                      + |..||.+....+....+....                       ..                          .....+
T Consensus       234 ~~g~~p~~~~~~~~~~~~~~~~~-----------------------~~--------------------------~~~~~~  264 (323)
T 3qup_A          234 TRGQTPYAGIENAEIYNYLIGGN-----------------------RL--------------------------KQPPEC  264 (323)
T ss_dssp             TTSCCTTTTCCGGGHHHHHHTTC-----------------------CC--------------------------CCCTTC
T ss_pred             hCCCCCccccChHHHHHHHhcCC-----------------------CC--------------------------CCCCcc
Confidence            9 999998877655444332210                       00                          111245


Q ss_pred             hHHHHHHHHHccccCCCCCCC-------HHHHHcCCCCCCCCCCCcchh
Q 015532          359 AGDLIDLLQGLLRYDPAERLK-------AREALRHPFFTRDVRRPTLLV  400 (405)
Q Consensus       359 ~~~l~~ll~~~L~~dP~~Rpt-------a~elL~hp~f~~~~~~~~~~~  400 (405)
                      ++.+.+||.+||+.||++|||       ++++++|+|+......|....
T Consensus       265 ~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~~~  313 (323)
T 3qup_A          265 MEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYIN  313 (323)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------------
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Confidence            678999999999999999999       788889999999877765543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.3e-41  Score=323.73  Aligned_cols=238  Identities=27%  Similarity=0.401  Sum_probs=157.7

Q ss_pred             ccCCCeEEEe-eeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           89 NLTPRYRILS-KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        89 ~~~~~y~~~~-~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .+.++|++.+ .||+|+||+||+|++..+++.||||++.........   ....++.+.|+++....             
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            4668899965 599999999999999999999999999764332222   22345666777763211             


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++                
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~----------------  165 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE----------------  165 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS----------------
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecC----------------
Confidence                                12588999999999999999999999999999999999997533                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                              ....+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus       166 --------~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  237 (336)
T 3fhr_A          166 --------KDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI  237 (336)
T ss_dssp             --------TTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             --------CCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh
Confidence                    2345889999988654432 2345789999999999888899999999999999999999999976544332


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.....                    .....                      ........+++.+.+||.+||+.|
T Consensus       238 ~~~~~~~~~--------------------~~~~~----------------------~~~~~~~~~~~~~~~li~~~L~~d  275 (336)
T 3fhr_A          238 SPGMKRRIR--------------------LGQYG----------------------FPNPEWSEVSEDAKQLIRLLLKTD  275 (336)
T ss_dssp             ---------------------------------C----------------------CCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred             hhhHHHhhh--------------------ccccc----------------------cCchhhccCCHHHHHHHHHHCCCC
Confidence            111110000                    00000                      001112345778999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCCCCCC
Q 015532          374 PAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~~~~~  395 (405)
                      |++|||++|+|+||||++....
T Consensus       276 P~~Rpt~~ell~hp~~~~~~~~  297 (336)
T 3fhr_A          276 PTERLTITQFMNHPWINQSMVV  297 (336)
T ss_dssp             GGGSCCHHHHHHSHHHHTGGGS
T ss_pred             hhHCcCHHHHhcCccccccccC
Confidence            9999999999999999875443

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.6e-41  Score=314.21  Aligned_cols=246  Identities=24%  Similarity=0.339  Sum_probs=172.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.++|++.+.||+|+||.||+|++..+++.||||+++......+.+.+|+.+++.+.|+++....               
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            34679999999999999999999999999999999977666667788999999999999874321               


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  208 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~  208 (405)
                                                ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||++
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  163 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA  163 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence                                      123567888999999999999999999999999999999987776666666654


Q ss_pred             ccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          209 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                      .........         .. .+...............||+.|+|||++.+. .++.++|||||||++|+|++   ||..
T Consensus       164 ~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          164 KNVHRSLDI---------LK-LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             SCTTC-----------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             hhcccccch---------hc-cccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            322211000         00 0000000001112235789999999999875 68999999999999999998   5543


Q ss_pred             CCh-HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          288 HEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       288 ~~~-~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      ... .+....+......                        ++                      .......+..+.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~------------------------~~----------------------~~~~~~~~~~~~~li  264 (303)
T 1zy4_A          231 GMERVNILKKLRSVSIE------------------------FP----------------------PDFDDNKMKVEKKII  264 (303)
T ss_dssp             HHHHHHHHHHHHSTTCC------------------------CC----------------------TTCCTTTSHHHHHHH
T ss_pred             chhHHHHHHhccccccc------------------------cC----------------------ccccccchHHHHHHH
Confidence            221 1222211111111                        11                      011233456789999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .+||+.||++|||++|+++||||+....
T Consensus       265 ~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (303)
T 1zy4_A          265 RLLIDHDPNKRPGARTLLNSGWLPVKHQ  292 (303)
T ss_dssp             HHHTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred             HHHHhcCcccCcCHHHHhCCCCcCCCCh
Confidence            9999999999999999999999987644

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=8.6e-41  Score=309.23  Aligned_cols=227  Identities=22%  Similarity=0.361  Sum_probs=181.0

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||+|++...   ....+.+.+|+.+++.+.|+++....             
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35799999999999999999999999999999999643   23456788999999999999884421             


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCC-----cEecCCCCCcEEEecccccccCCccccc
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELR-----LIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                          ...+++..++.++.||+.||.|||++|     |+||||||+|||++.++           
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~-----------  153 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-----------  153 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS-----------
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC-----------
Confidence                                012788999999999999999999999     99999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                      .++|+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       154 ----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  217 (279)
T 2w5a_A          154 ----------------NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT  217 (279)
T ss_dssp             ----------------CEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ----------------CEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence                            45666666654433222   22478999999999999899999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      ..+..+....+.....  +                                               .....++.++.+||
T Consensus       218 ~~~~~~~~~~i~~~~~--~-----------------------------------------------~~~~~~~~~l~~li  248 (279)
T 2w5a_A          218 AFSQKELAGKIREGKF--R-----------------------------------------------RIPYRYSDELNEII  248 (279)
T ss_dssp             CSSHHHHHHHHHHTCC--C-----------------------------------------------CCCTTSCHHHHHHH
T ss_pred             ccCHHHHHHHHhhccc--c-----------------------------------------------cCCcccCHHHHHHH
Confidence            8776555444332110  0                                               01123467899999


Q ss_pred             HHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          367 QGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      .+||+.||++|||++|+|+|+|+.++.
T Consensus       249 ~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          249 TRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             HHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            999999999999999999999998864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.7e-41  Score=316.28  Aligned_cols=225  Identities=24%  Similarity=0.388  Sum_probs=170.6

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-------hhHHHHHHHHHHHHH----hhcCCCCCc-
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRL----ARHDIGGTR-  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~il~~l----~~~~~~~~~-  154 (405)
                      ++.+.++|++.+.||+|+||.||+|++..+++.||||+++....       ....+.+|+.++.++    .|+++.... 
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            45567889999999999999999999999999999999965332       223345799999999    788874321 


Q ss_pred             ---------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe-cccccccCCcc
Q 015532          155 ---------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPDYK  206 (405)
Q Consensus       155 ---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~-~~~~~k~~df~  206 (405)
                                                 ...+++..++.++.||+.||.|||++||+||||||+||+++ .++        
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--------  177 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG--------  177 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT--------
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC--------
Confidence                                       13478899999999999999999999999999999999997 444        


Q ss_pred             ccccCCCCCCcccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCC-CchhHHHHHHHHHHHHhCCCC
Q 015532          207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEAL  284 (405)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~~lltg~~p  284 (405)
                                         .++|+|||++...... .....||..|+|||++.+..+. .++|||||||++|+|++|..|
T Consensus       178 -------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  238 (312)
T 2iwi_A          178 -------------------CAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP  238 (312)
T ss_dssp             -------------------EEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------------eEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCC
Confidence                               4666777766544332 2335789999999999877664 589999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       285 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      |.....      +...                        ..                          .....++..+.+
T Consensus       239 f~~~~~------~~~~------------------------~~--------------------------~~~~~~~~~~~~  262 (312)
T 2iwi_A          239 FERDQE------ILEA------------------------EL--------------------------HFPAHVSPDCCA  262 (312)
T ss_dssp             CCSHHH------HHHT------------------------CC--------------------------CCCTTSCHHHHH
T ss_pred             CCChHH------Hhhh------------------------cc--------------------------CCcccCCHHHHH
Confidence            965211      1000                        00                          111245678999


Q ss_pred             HHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          365 LLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      ||.+||+.||++|||++|+++||||+....
T Consensus       263 li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          263 LIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             HHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            999999999999999999999999998643

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.1e-41  Score=333.25  Aligned_cols=218  Identities=18%  Similarity=0.213  Sum_probs=167.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCC-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDI-----------------  150 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~-----------------  150 (405)
                      ..|.+.+.||+|+||+||+|++..+|+.||||+++..    ....+.+.+|+.+++.+.|...                 
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            3588999999999999999999999999999998732    2234667889988888876210                 


Q ss_pred             ------------CC-C------------------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Q 015532          151 ------------GG-T------------------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  187 (405)
Q Consensus       151 ------------~~-~------------------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDl  187 (405)
                                  .. .                              ....+++..+..++.||+.||.|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence                        00 0                              0122456678888999999999999999999999


Q ss_pred             CCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHH----------
Q 015532          188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI----------  257 (405)
Q Consensus       188 kp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~----------  257 (405)
                      ||+|||++.++.                           +||+|||++..........+| +.|+|||++          
T Consensus       238 Kp~NILl~~~~~---------------------------~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~  289 (413)
T 3dzo_A          238 RPVDIVLDQRGG---------------------------VFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQH  289 (413)
T ss_dssp             CGGGEEECTTCC---------------------------EEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred             ccceEEEecCCe---------------------------EEEEeccceeecCCccccCCC-CceeCchhhhccccccccc
Confidence            999999977654                           566666666554444445678 999999999          


Q ss_pred             hCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhh
Q 015532          258 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS  337 (405)
Q Consensus       258 ~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (405)
                      .+..++.++|||||||++|+|++|+.||.+.+..+...                                          
T Consensus       290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~------------------------------------------  327 (413)
T 3dzo_A          290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE------------------------------------------  327 (413)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG------------------------------------------
T ss_pred             cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH------------------------------------------
Confidence            44458889999999999999999999997654211100                                          


Q ss_pred             HHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCC
Q 015532          338 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~  391 (405)
                                  ........+++.+.+||.+||+.||++|||+.|+++||||++
T Consensus       328 ------------~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          328 ------------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             ------------GGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ------------HHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence                        001111245678999999999999999999999999999974

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.2e-40  Score=310.70  Aligned_cols=224  Identities=21%  Similarity=0.251  Sum_probs=169.1

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .+.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+.+++.+.|+++....              
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            45678999999999999999999999999999999875433 234578899999999998864321              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEE---ecccccccCCccccccCCCCCCc
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL---VSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli---~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++                   
T Consensus        85 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~-------------------  145 (296)
T 4hgt_A           85 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN-------------------  145 (296)
T ss_dssp             ECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTT-------------------
T ss_pred             EccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCC-------------------
Confidence                          2357899999999999999999999999999999999999   4444                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                              .+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       146 --------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 4hgt_A          146 --------LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             --------CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             --------eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcc
Confidence                    4566666666443221          1235799999999999999999999999999999999999999976


Q ss_pred             CChHH---HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHH
Q 015532          288 HENLE---HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  364 (405)
Q Consensus       288 ~~~~~---~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  364 (405)
                      .....   .+..+......                                             .........+++.+.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~l~~  252 (296)
T 4hgt_A          218 LKAATKRQKYERISEKKMS---------------------------------------------TPIEVLCKGYPSEFAT  252 (296)
T ss_dssp             CCCSSSSSHHHHHHHHHHH---------------------------------------------SCHHHHTTTSCHHHHH
T ss_pred             cchhhhhhhhhhhhccccc---------------------------------------------chhhhhhccCCHHHHH
Confidence            43321   11111111000                                             0011112345678999


Q ss_pred             HHHHccccCCCCCCCHHHHHc
Q 015532          365 LLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       365 ll~~~L~~dP~~Rpta~elL~  385 (405)
                      ||.+||+.||++|||++++++
T Consensus       253 li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          253 YLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHhcCCCCCCCHHHHHH
Confidence            999999999999999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.2e-40  Score=314.34  Aligned_cols=227  Identities=21%  Similarity=0.263  Sum_probs=174.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~--------------  154 (405)
                      +.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++.+ .|+++....              
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            4578999999999999999999999999999999986533 234578899999999 888773321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                      
T Consensus        86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~----------------------  143 (330)
T 2izr_A           86 LLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN----------------------  143 (330)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG----------------------
T ss_pred             eCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC----------------------
Confidence                         246889999999999999999999999999999999999987653                      


Q ss_pred             CCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                      .....+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       144 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~  223 (330)
T 2izr_A          144 KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD  223 (330)
T ss_dssp             TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS
T ss_pred             CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc
Confidence            01223667777766543221          13468999999999999999999999999999999999999999875432


Q ss_pred             H---HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          292 E---HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       292 ~---~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      +   .+..+.......|.                                             .......+ ++.+||..
T Consensus       224 ~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~~p-~~~~li~~  257 (330)
T 2izr_A          224 TLKERYQKIGDTKRATPI---------------------------------------------EVLCENFP-EMATYLRY  257 (330)
T ss_dssp             SHHHHHHHHHHHHHHSCH---------------------------------------------HHHTTTCH-HHHHHHHH
T ss_pred             cHHHHHHHHHhhhccCCH---------------------------------------------HHHhccCh-HHHHHHHH
Confidence            2   22222211111110                                             00112234 89999999


Q ss_pred             ccccCCCCCCCHHHHHc
Q 015532          369 LLRYDPAERLKAREALR  385 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~  385 (405)
                      ||+.||++||+++++++
T Consensus       258 ~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          258 VRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHCCTTCCCCHHHHHH
T ss_pred             HHhCCCCCCCCHHHHHH
Confidence            99999999999998876

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.5e-40  Score=307.21  Aligned_cols=231  Identities=19%  Similarity=0.237  Sum_probs=177.5

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc-----------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR-----------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~-----------  154 (405)
                      ++.+.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++.+ .|+++....           
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   83 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL   83 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence            4556789999999999999999999999999999999986433 345578899999999 455442211           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                   
T Consensus        84 v~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~-------------------  144 (298)
T 1csn_A           84 VIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS-------------------  144 (298)
T ss_dssp             EEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS-------------------
T ss_pred             EEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC-------------------
Confidence                            135899999999999999999999999999999999999976552                   


Q ss_pred             cCCCCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                         .....++|+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       145 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          145 ---KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             ---TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ---CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence               12334777777777544322          23357999999999999999999999999999999999999999874


Q ss_pred             C---hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          289 E---NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       289 ~---~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      .   ..+.+..+.......+                                             .......+++.+.+|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l~~l  256 (298)
T 1csn_A          222 KAATNKQKYERIGEKKQSTP---------------------------------------------LRELCAGFPEEFYKY  256 (298)
T ss_dssp             CSCCHHHHHHHHHHHHHHSC---------------------------------------------HHHHTTTSCHHHHHH
T ss_pred             hccccHHHHHHHHhhccCcc---------------------------------------------HHHHHhhCcHHHHHH
Confidence            3   2233322222110000                                             011123457789999


Q ss_pred             HHHccccCCCCCCCHHHHHc
Q 015532          366 LQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~  385 (405)
                      |.+||+.||++|||++++++
T Consensus       257 i~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          257 MHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHhcCCcccCCCHHHHHH
Confidence            99999999999999999875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.6e-41  Score=322.73  Aligned_cols=228  Identities=18%  Similarity=0.269  Sum_probs=179.5

Q ss_pred             cCCCeEEEeeeecccceeEEEEE-----ecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~-----~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      ..++|++.+.||+|+||+||+|+     +..+++.||||+++..  ......+.+|+.+++.+.|+++....        
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            34789999999999999999999     4457789999998642  33445678899999999999984321        


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  208 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~  208 (405)
                                                ...+++..++.++.||+.||.|||++||+||||||+|||++.+|          
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~----------  218 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG----------  218 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS----------
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC----------
Confidence                                      12478889999999999999999999999999999999997554          


Q ss_pred             ccCCCCCCcccCCCCCCCceeccCCCCcccc-----CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CC
Q 015532          209 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH-----QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  282 (405)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~  282 (405)
                                    ....+||+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       219 --------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~  284 (367)
T 3l9p_A          219 --------------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY  284 (367)
T ss_dssp             --------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             --------------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                          23347777887775321     12223568999999999999999999999999999999998 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      .||.+....+....+......                                                 .....++..+
T Consensus       285 ~pf~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l  315 (367)
T 3l9p_A          285 MPYPSKSNQEVLEFVTSGGRM-------------------------------------------------DPPKNCPGPV  315 (367)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCC-------------------------------------------------CCCTTCCHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCC-------------------------------------------------CCCccCCHHH
Confidence            999988776655544321100                                                 0112346689


Q ss_pred             HHHHHHccccCCCCCCCHHHHHcCCCCC
Q 015532          363 IDLLQGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                      .+||.+||+.||++|||+.++++|.|+-
T Consensus       316 ~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          316 YRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999999999987654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=6.6e-41  Score=320.04  Aligned_cols=248  Identities=20%  Similarity=0.323  Sum_probs=183.8

Q ss_pred             eCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhh------------------hHHHHHHHHHHHHHhh
Q 015532           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------------REAAMIEIDVLQRLAR  147 (405)
Q Consensus        86 ~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------------------~~~~~~E~~il~~l~~  147 (405)
                      .++...++|++.+.||+|+||.||+|++  +++.||||++......                  .+.+.+|+.+++.+.|
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  102 (348)
T 2pml_X           25 EKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN  102 (348)
T ss_dssp             SSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC
T ss_pred             hcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC
Confidence            3445568999999999999999999998  8999999999653221                  1778899999999999


Q ss_pred             cCCCCCc-----------------------------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCc
Q 015532          148 HDIGGTR-----------------------------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPEN  191 (405)
Q Consensus       148 ~~~~~~~-----------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~N  191 (405)
                      +++....                                   ...+++..++.++.||+.||.|||+ +||+||||||+|
T Consensus       103 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          103 EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            9873211                                   2457889999999999999999999 999999999999


Q ss_pred             EEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCC-CCCC-chhH
Q 015532          192 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGL-GWNY-PCDL  268 (405)
Q Consensus       192 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~-~~Di  268 (405)
                      |+++.++                           .++|+|||.+...... .....||..|+|||++.+. .++. ++||
T Consensus       183 il~~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di  235 (348)
T 2pml_X          183 ILMDKNG---------------------------RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI  235 (348)
T ss_dssp             EEECTTS---------------------------CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHH
T ss_pred             EEEcCCC---------------------------cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhH
Confidence            9997655                           4667777766543322 2335789999999999887 5665 9999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc
Q 015532          269 WSVGCILVELCSGEALFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  347 (405)
Q Consensus       269 wSlG~il~~lltg~~pf~~~~~-~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (405)
                      |||||++|+|++|..||..... .+....+.......|...                 ..+....              .
T Consensus       236 ~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~-----------------~~~~~~~--------------~  284 (348)
T 2pml_X          236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR-----------------NHFLYPL--------------T  284 (348)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSS-----------------SSSTTTT--------------C
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccch-----------------hhhhccc--------------c
Confidence            9999999999999999987765 444443322111111100                 0000000              0


Q ss_pred             hhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCC
Q 015532          348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       348 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      ..........++..+.+||.+||+.||++|||++|+|+||||++..
T Consensus       285 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          285 NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             C--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            0000111235678999999999999999999999999999999754

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=5.9e-40  Score=306.12  Aligned_cols=227  Identities=22%  Similarity=0.272  Sum_probs=174.1

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+.+++.+.|+++....              
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            456889999999999999999999999999999999865433 34578899999999998863221              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||.|||++||+||||||+|||++...                      
T Consensus        85 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~----------------------  142 (296)
T 3uzp_A           85 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK----------------------  142 (296)
T ss_dssp             ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG----------------------
T ss_pred             EecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCC----------------------
Confidence                          23578999999999999999999999999999999999995211                      


Q ss_pred             CCCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                        .+..+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       143 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  220 (296)
T 3uzp_A          143 --KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA  220 (296)
T ss_dssp             --GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             --CCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence              2234666666666543322          1335799999999999999999999999999999999999999976432


Q ss_pred             H---HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          291 L---EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       291 ~---~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .   +.+..+.......|                                             .......+++.+.+||.
T Consensus       221 ~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l~~li~  255 (296)
T 3uzp_A          221 ATKRQKYERISEKKMSTP---------------------------------------------IEVLCKGYPSEFATYLN  255 (296)
T ss_dssp             SSSSSHHHHHHHHHHHSC---------------------------------------------HHHHTTTSCHHHHHHHH
T ss_pred             hhhhhhhhhhcccccCCc---------------------------------------------hHHHHhhCCHHHHHHHH
Confidence            1   12222211100000                                             01112345678999999


Q ss_pred             HccccCCCCCCCHHHHHc
Q 015532          368 GLLRYDPAERLKAREALR  385 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~  385 (405)
                      +||+.||++|||++++++
T Consensus       256 ~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          256 FCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTSCTTCCCCHHHHHH
T ss_pred             HHHhcCcCcCCCHHHHHH
Confidence            999999999999999885

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=3.1e-40  Score=310.93  Aligned_cols=237  Identities=29%  Similarity=0.427  Sum_probs=173.6

Q ss_pred             ceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhh--cCCCCCc--
Q 015532           82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLAR--HDIGGTR--  154 (405)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~--~~~~~~~--  154 (405)
                      +.+.......++|++.+.||+|+||.||+|.+. +++.||||++...   ....+.+.+|+.+++.+.|  +++....  
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            334444455678999999999999999999985 5888999999542   2345678899999999986  5553211  


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++..++.++.||+.||.|||++||+||||||+|||++. +            
T Consensus        97 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~------------  163 (313)
T 3cek_A           97 EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G------------  163 (313)
T ss_dssp             EECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-T------------
T ss_pred             eecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-C------------
Confidence                                    235788899999999999999999999999999999999953 3            


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhC-----------CCCCCchhHHHHHHH
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILG-----------LGWNYPCDLWSVGCI  274 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~i  274 (405)
                                     .+||+|||++.......     ....||+.|+|||++.+           ..++.++|||||||+
T Consensus       164 ---------------~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~i  228 (313)
T 3cek_A          164 ---------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI  228 (313)
T ss_dssp             ---------------EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHH
T ss_pred             ---------------eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHH
Confidence                           36677777665433221     23478999999999976           468889999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhc
Q 015532          275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  354 (405)
Q Consensus       275 l~~lltg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (405)
                      +|+|++|..||........  .+.....                   ......                          .
T Consensus       229 l~el~~g~~pf~~~~~~~~--~~~~~~~-------------------~~~~~~--------------------------~  261 (313)
T 3cek_A          229 LYYMTYGKTPFQQIINQIS--KLHAIID-------------------PNHEIE--------------------------F  261 (313)
T ss_dssp             HHHHHHSSCTTTTCCSHHH--HHHHHHC-------------------TTSCCC--------------------------C
T ss_pred             HHHHHhCCCchhhHHHHHH--HHHHHHh-------------------cccccC--------------------------C
Confidence            9999999999976543211  1111110                   000111                          1


Q ss_pred             ccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCC
Q 015532          355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       355 ~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      ....+..+.+||.+||+.||++|||+.|+|+||||+....
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  301 (313)
T 3cek_A          262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH  301 (313)
T ss_dssp             CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred             cccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence            1233568899999999999999999999999999987643

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=3.9e-40  Score=309.89  Aligned_cols=226  Identities=20%  Similarity=0.274  Sum_probs=171.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.+.||+|+||+||+|++  +++.||||++....   ...+.+.+|+.+++++.|+++....             
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            46899999999999999999987  47889999986532   3345678999999999999884321             


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                       ...+++..+..++.||+.||.|||++|  |+||||||+|||++.++                 
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~-----------------  176 (309)
T 3p86_A          114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-----------------  176 (309)
T ss_dssp             ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC-----------------
T ss_pred             ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC-----------------
Confidence                             012788999999999999999999999  99999999999997655                 


Q ss_pred             CcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                                .+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       177 ----------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~  246 (309)
T 3p86_A          177 ----------TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ  246 (309)
T ss_dssp             ----------CEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH
T ss_pred             ----------cEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                      4666667666543322   223579999999999999999999999999999999999999998877766


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+......                      .                          .....+++.+.+||.+||+.
T Consensus       247 ~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~l~~li~~~l~~  278 (309)
T 3p86_A          247 VVAAVGFKCKR----------------------L--------------------------EIPRNLNPQVAAIIEGCWTN  278 (309)
T ss_dssp             HHHHHHHSCCC----------------------C--------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCCC----------------------C--------------------------CCCccCCHHHHHHHHHHccC
Confidence            55443221110                      0                          11234567899999999999


Q ss_pred             CCCCCCCHHHHHc--CCCCCCCC
Q 015532          373 DPAERLKAREALR--HPFFTRDV  393 (405)
Q Consensus       373 dP~~Rpta~elL~--hp~f~~~~  393 (405)
                      ||++|||++|+++  +++++...
T Consensus       279 dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          279 EPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             SGGGSCCHHHHHHHHHHHHC---
T ss_pred             ChhhCcCHHHHHHHHHHHHHhCC
Confidence            9999999999997  56666543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2e-40  Score=305.29  Aligned_cols=218  Identities=23%  Similarity=0.331  Sum_probs=175.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.+.||+|+||.||+|++. +++.||||+++......+.+.+|+.+++++.|+++....                 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            57999999999999999999986 467799999987666667889999999999999874321                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                        
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~------------------------  144 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV------------------------  144 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC------------------------
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCC------------------------
Confidence                       134788999999999999999999999999999999999976654                        


Q ss_pred             CCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                         ++|+|||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+.
T Consensus       145 ---~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~  221 (269)
T 4hcu_A          145 ---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS  221 (269)
T ss_dssp             ---EEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             ---EEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh
Confidence               566666665443221    112356778999999999899999999999999999999 999999887766555443


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .....                                                 ......++.+.+||.+||+.||++||
T Consensus       222 ~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (269)
T 4hcu_A          222 TGFRL-------------------------------------------------YKPRLASTHVYQIMNHCWRERPEDRP  252 (269)
T ss_dssp             TTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCccC-------------------------------------------------CCCCcCCHHHHHHHHHHccCCcccCc
Confidence            21110                                                 01123467899999999999999999


Q ss_pred             CHHHHHcC
Q 015532          379 KAREALRH  386 (405)
Q Consensus       379 ta~elL~h  386 (405)
                      |+.|+++|
T Consensus       253 s~~~ll~~  260 (269)
T 4hcu_A          253 AFSRLLRQ  260 (269)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999975

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=3.6e-41  Score=315.28  Aligned_cols=246  Identities=23%  Similarity=0.354  Sum_probs=160.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||++...  ....+.+.+|+.+++.+.|+++....              
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   93 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK   93 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence            46899999999999999999999989999999998643  23345677899999999999874311              


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+|++|||++.....
T Consensus        94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  173 (303)
T 2vwi_A           94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT  173 (303)
T ss_dssp             CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred             hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence                                 12378999999999999999999999999999999999998777666666665432211


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                      ...                   ...........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.......
T Consensus       174 ~~~-------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  234 (303)
T 2vwi_A          174 GGD-------------------ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK  234 (303)
T ss_dssp             ---------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred             CCC-------------------ccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh
Confidence            100                   000011123478999999999976 468999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .......  +..+.                     ...                 ..........++..+.+||.+||+.
T Consensus       235 ~~~~~~~--~~~~~---------------------~~~-----------------~~~~~~~~~~~~~~~~~li~~~l~~  274 (303)
T 2vwi_A          235 VLMLTLQ--NDPPS---------------------LET-----------------GVQDKEMLKKYGKSFRKMISLCLQK  274 (303)
T ss_dssp             HHHHHHT--SSCCC---------------------TTC----------------------CCCCCCCHHHHHHHHHHCCS
T ss_pred             HHHHHhc--cCCCc---------------------ccc-----------------ccccchhhhhhhHHHHHHHHHHccC
Confidence            3322211  00000                     000                 0000112245577899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~~~  395 (405)
                      ||++|||+.|+++||||++....
T Consensus       275 dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          275 DPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             SGGGSCCHHHHHTSTTC------
T ss_pred             ChhhCcCHHHHhhChhhhcCCCC
Confidence            99999999999999999976443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.4e-40  Score=313.55  Aligned_cols=220  Identities=21%  Similarity=0.265  Sum_probs=173.7

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCc---EEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..++|++.+.||+|+||.||+|++..+++   .||||+++..  ....+.+.+|+.+++.+.|+++....          
T Consensus        47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  126 (325)
T 3kul_A           47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM  126 (325)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred             ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence            35789999999999999999999986554   5999999753  34456788999999999999884321          


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                 
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~-----------------  189 (325)
T 3kul_A          127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV-----------------  189 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-----------------
T ss_pred             EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCC-----------------
Confidence                              236789999999999999999999999999999999999976554                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  289 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~  289 (405)
                                ++|+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus       190 ----------~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~  259 (325)
T 3kul_A          190 ----------CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT  259 (325)
T ss_dssp             ----------EEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred             ----------EEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence                      5666666655433221      11245778999999998899999999999999999999 999998887


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+....+.....                       .                          .....+++.+.+||.+|
T Consensus       260 ~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~~  290 (325)
T 3kul_A          260 NRDVISSVEEGYR-----------------------L--------------------------PAPMGCPHALHQLMLDC  290 (325)
T ss_dssp             HHHHHHHHHTTCC-----------------------C--------------------------CCCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCC-----------------------C--------------------------CCCCCcCHHHHHHHHHH
Confidence            7666554432110                       0                          01124567899999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |..||++|||+.|+++
T Consensus       291 l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          291 WHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhhCcCHHHHHH
Confidence            9999999999999986

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=3.8e-40  Score=306.30  Aligned_cols=226  Identities=20%  Similarity=0.231  Sum_probs=178.7

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh--------hhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      ..++|++.+.||+|+||+||+|++..+++.||||++.....        ..+.+.+|+.+++.+.|+++....       
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP   96 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence            35789999999999999999999999999999999854221        115678999999999999874321       


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                         ...+++..+..++.||+.||.|||++|  |+||||||+|||++.++.              
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~--------------  162 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE--------------  162 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT--------------
T ss_pred             eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC--------------
Confidence                               235788999999999999999999999  999999999999976441              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHh--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL--GLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                              +....+||+|||++...........||+.|+|||++.  +..++.++|||||||++|+|++|..||......
T Consensus       163 --------~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  234 (287)
T 4f0f_A          163 --------NAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG  234 (287)
T ss_dssp             --------TCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC
T ss_pred             --------CCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc
Confidence                    1233488999999887666656678999999999984  445789999999999999999999999765433


Q ss_pred             HH--HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          292 EH--LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       292 ~~--~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..  ...+.. .+.                     .                          ......+++.+.+||.+|
T Consensus       235 ~~~~~~~~~~-~~~---------------------~--------------------------~~~~~~~~~~l~~li~~~  266 (287)
T 4f0f_A          235 KIKFINMIRE-EGL---------------------R--------------------------PTIPEDCPPRLRNVIELC  266 (287)
T ss_dssp             HHHHHHHHHH-SCC---------------------C--------------------------CCCCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHhc-cCC---------------------C--------------------------CCCCcccCHHHHHHHHHH
Confidence            22  111111 000                     0                          011234567899999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |+.||++|||++|+++
T Consensus       267 l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          267 WSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             hcCChhhCcCHHHHHH
Confidence            9999999999999986

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=4.7e-40  Score=302.58  Aligned_cols=219  Identities=19%  Similarity=0.270  Sum_probs=175.4

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.+.||+|+||.||+|.+. ++..||||+++......+.+.+|+++++.+.|+++....                
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            468999999999999999999875 567799999987666667789999999999999874321                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+||+++.++.                       
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~-----------------------  142 (268)
T 3sxs_A           86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLC-----------------------  142 (268)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCC-----------------------
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCC-----------------------
Confidence                        124789999999999999999999999999999999999976554                       


Q ss_pred             CCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                          ++|+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+
T Consensus       143 ----~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  218 (268)
T 3sxs_A          143 ----VKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV  218 (268)
T ss_dssp             ----EEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             ----EEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH
Confidence                5666666654333221    11345678999999999889999999999999999999 99999887776655443


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......                                                 ......++.+.+||.+||+.||++|
T Consensus       219 ~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~R  249 (268)
T 3sxs_A          219 SQGHRL-------------------------------------------------YRPHLASDTIYQIMYSCWHELPEKR  249 (268)
T ss_dssp             HTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHTTCSSGGGS
T ss_pred             HcCCCC-------------------------------------------------CCCCcChHHHHHHHHHHcCCChhhC
Confidence            321100                                                 0012346689999999999999999


Q ss_pred             CCHHHHHcC
Q 015532          378 LKAREALRH  386 (405)
Q Consensus       378 pta~elL~h  386 (405)
                      ||+.|+++|
T Consensus       250 ps~~~ll~~  258 (268)
T 3sxs_A          250 PTFQQLLSS  258 (268)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999975

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.6e-40  Score=313.56  Aligned_cols=219  Identities=22%  Similarity=0.286  Sum_probs=165.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcE----EEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~----vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.    ||+|.++..  ....+.+.+|+.+++.+.|+++....           
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v   94 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            6799999999999999999999877765    477777532  23456788999999999999985321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|              
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~D--------------  160 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD--------------  160 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECC--------------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEcc--------------
Confidence                            23578899999999999999999999999999999999998877555555              


Q ss_pred             cCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                                   ||++......     .....||..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       161 -------------fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  227 (327)
T 3poz_A          161 -------------FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             -------------TTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             -------------CcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH
Confidence                         4444332211     112356889999999999999999999999999999999 999998876554


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+....                       ..                          ......+..+.+|+.+||+.
T Consensus       228 ~~~~~~~~~-----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~  258 (327)
T 3poz_A          228 ISSILEKGE-----------------------RL--------------------------PQPPICTIDVYMIMVKCWMI  258 (327)
T ss_dssp             HHHHHHTTC-----------------------CC--------------------------CCCTTBCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCC-----------------------CC--------------------------CCCccCCHHHHHHHHHHcCC
Confidence            433322110                       00                          01123466899999999999


Q ss_pred             CCCCCCCHHHHHcC
Q 015532          373 DPAERLKAREALRH  386 (405)
Q Consensus       373 dP~~Rpta~elL~h  386 (405)
                      ||++|||+.|++++
T Consensus       259 ~p~~Rps~~ell~~  272 (327)
T 3poz_A          259 DADSRPKFRELIIE  272 (327)
T ss_dssp             CGGGSCCHHHHHHH
T ss_pred             ChhhCCCHHHHHHH
Confidence            99999999999965

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=7.6e-40  Score=314.00  Aligned_cols=221  Identities=22%  Similarity=0.315  Sum_probs=170.2

Q ss_pred             CCCeEEEeeeecccceeEEEEE-----ecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~-----~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~--------  154 (405)
                      .++|++.+.||+|+||.||+|+     +..+++.||||+++...  ...+.+.+|+.++.++ .|+++....        
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~  100 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  100 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence            4789999999999999999999     55677899999997532  3345688999999999 566763211        


Q ss_pred             --------------------c-----------------------------------------------------------
Q 015532          155 --------------------Y-----------------------------------------------------------  155 (405)
Q Consensus       155 --------------------~-----------------------------------------------------------  155 (405)
                                          .                                                           
T Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (359)
T 3vhe_A          101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  180 (359)
T ss_dssp             CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred             ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence                                0                                                           


Q ss_pred             -------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCce
Q 015532          156 -------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  228 (405)
Q Consensus       156 -------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  228 (405)
                             ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||                      
T Consensus       181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg----------------------  238 (359)
T 3vhe_A          181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG----------------------  238 (359)
T ss_dssp             ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCG----------------------
T ss_pred             cccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEecc----------------------
Confidence                   018889999999999999999999999999999999999877655555555                      


Q ss_pred             eccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 015532          229 LIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       229 l~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g  302 (405)
                           ++......     .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+........
T Consensus       239 -----~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~  313 (359)
T 3vhe_A          239 -----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT  313 (359)
T ss_dssp             -----GGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC
T ss_pred             -----ceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC
Confidence                 44322111     122468899999999999999999999999999999998 9999987654433322221110


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                                            ..                          ......++++.+||.+||+.||++|||+.|
T Consensus       314 ----------------------~~--------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  345 (359)
T 3vhe_A          314 ----------------------RM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSE  345 (359)
T ss_dssp             ----------------------CC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ----------------------CC--------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence                                  00                          111234678999999999999999999999


Q ss_pred             HHcC
Q 015532          383 ALRH  386 (405)
Q Consensus       383 lL~h  386 (405)
                      +++|
T Consensus       346 ll~~  349 (359)
T 3vhe_A          346 LVEH  349 (359)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=7.6e-40  Score=305.22  Aligned_cols=227  Identities=21%  Similarity=0.326  Sum_probs=171.2

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      |.....||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++.+.|+++....                  
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  103 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG  103 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence            333458999999999999999999999999986543 3456788999999999999985421                  


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEec-ccccccCCccccccCCCCCCcccCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~-~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+||+++. ++                       
T Consensus       104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-----------------------  160 (295)
T 2clq_A          104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG-----------------------  160 (295)
T ss_dssp             EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTC-----------------------
T ss_pred             CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCC-----------------------
Confidence                        113467888999999999999999999999999999999975 34                       


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCC--CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                          .++|+|||++......   .....||+.|+|||++.+..  ++.++|||||||++|+|++|..||...........
T Consensus       161 ----~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  236 (295)
T 2clq_A          161 ----VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF  236 (295)
T ss_dssp             ----CEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH
T ss_pred             ----CEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH
Confidence                4677777766543321   22357899999999997653  88999999999999999999999975443322111


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      ........                                               ......++..+.+||.+||+.||++
T Consensus       237 ~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~  269 (295)
T 2clq_A          237 KVGMFKVH-----------------------------------------------PEIPESMSAEAKAFILKCFEPDPDK  269 (295)
T ss_dssp             HHHHHCCC-----------------------------------------------CCCCTTSCHHHHHHHHHTTCSSTTT
T ss_pred             hhcccccc-----------------------------------------------ccccccCCHHHHHHHHHHccCChhh
Confidence            10000000                                               0112345678999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVR  394 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~  394 (405)
                      |||++|+|+||||+....
T Consensus       270 Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          270 RACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             SCCHHHHHTSGGGCC---
T ss_pred             CCCHHHHhcChhhhhccc
Confidence            999999999999987643

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=5.1e-40  Score=304.81  Aligned_cols=219  Identities=19%  Similarity=0.300  Sum_probs=173.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.+.||+|+||+||+|.+. ++..||||+++......+.+.+|+.+++.+.|+++....                
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            357999999999999999999886 677899999987666667789999999999999874311                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||.|||++||+||||||+|||++.++                        
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~------------------------  157 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG------------------------  157 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTS------------------------
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCC------------------------
Confidence                        24578999999999999999999999999999999999997655                        


Q ss_pred             CCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                         .++|+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+
T Consensus       158 ---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~  234 (283)
T 3gen_A          158 ---VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI  234 (283)
T ss_dssp             ---CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             ---CEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH
Confidence               45666666665432211    12346778999999998899999999999999999998 99999988776655544


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+.....                                                 .....++.+.+||.+||+.||++|
T Consensus       235 ~~~~~~~-------------------------------------------------~~~~~~~~l~~li~~~l~~~p~~R  265 (283)
T 3gen_A          235 AQGLRLY-------------------------------------------------RPHLASEKVYTIMYSCWHEKADER  265 (283)
T ss_dssp             HTTCCCC-------------------------------------------------CCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             hcccCCC-------------------------------------------------CCCcCCHHHHHHHHHHccCChhHC
Confidence            3321110                                                 112345689999999999999999


Q ss_pred             CCHHHHHcC
Q 015532          378 LKAREALRH  386 (405)
Q Consensus       378 pta~elL~h  386 (405)
                      ||+.|+++|
T Consensus       266 ps~~~ll~~  274 (283)
T 3gen_A          266 PTFKILLSN  274 (283)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=4e-40  Score=306.30  Aligned_cols=226  Identities=23%  Similarity=0.336  Sum_probs=178.7

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCC-------cEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKK-------ELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~-------~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      ..++|++.+.||+|+||+||+|++..++       ..||+|++.... ...+.+.+|+.+++.+.|+++....       
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            3468999999999999999999998777       469999986533 4557788999999999999984321       


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..+..++.||+.||.|||++||+||||||+|||++.++..++.+++       
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~-------  158 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP-------  158 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCC-------
T ss_pred             CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccc-------
Confidence                                 1237889999999999999999999999999999999999998876666654       


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhC-CCCCCCCChH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG-EALFQTHENL  291 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg-~~pf~~~~~~  291 (405)
                                  .++|+|||++...... ....||+.|+|||++.+ ..++.++|||||||++|+|++| .+||......
T Consensus       159 ------------~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~  225 (289)
T 4fvq_A          159 ------------FIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ  225 (289)
T ss_dssp             ------------EEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             ------------eeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH
Confidence                        3799999998655432 33568999999999987 6789999999999999999995 5555554443


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      ...... .....                                                  .....+..+.+||.+||+
T Consensus       226 ~~~~~~-~~~~~--------------------------------------------------~~~~~~~~l~~li~~~l~  254 (289)
T 4fvq_A          226 RKLQFY-EDRHQ--------------------------------------------------LPAPKAAELANLINNCMD  254 (289)
T ss_dssp             HHHHHH-HTTCC--------------------------------------------------CCCCSSCTTHHHHHHHSC
T ss_pred             HHHHHh-hccCC--------------------------------------------------CCCCCCHHHHHHHHHHcC
Confidence            322211 11100                                                  112234578899999999


Q ss_pred             cCCCCCCCHHHHHcC
Q 015532          372 YDPAERLKAREALRH  386 (405)
Q Consensus       372 ~dP~~Rpta~elL~h  386 (405)
                      .||++|||+.|+++|
T Consensus       255 ~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          255 YEPDHRPSFRAIIRD  269 (289)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhHCcCHHHHHHH
Confidence            999999999999974

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=7e-40  Score=304.53  Aligned_cols=221  Identities=18%  Similarity=0.302  Sum_probs=178.6

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++.......+.+.+|+.+++.+.|+++....              
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            345789999999999999999999999999999999987666677889999999999999874321              


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+||+++.++.                    
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--------------------  149 (288)
T 3kfa_A           90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL--------------------  149 (288)
T ss_dssp             CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGC--------------------
T ss_pred             cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCC--------------------
Confidence                           134788999999999999999999999999999999999977664                    


Q ss_pred             CCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  294 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~  294 (405)
                             ++|+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       150 -------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~  222 (288)
T 3kfa_A          150 -------VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY  222 (288)
T ss_dssp             -------EEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred             -------EEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                   5566666554433222    12457889999999999899999999999999999999 99999877655444


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.....                                                 ......+++.+.+||.+||..||
T Consensus       223 ~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~~l~~dp  253 (288)
T 3kfa_A          223 ELLEKDYR-------------------------------------------------MERPEGCPEKVYELMRACWQWNP  253 (288)
T ss_dssp             HHHHTTCC-------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHhccCC-------------------------------------------------CCCCCCCCHHHHHHHHHHhCCCh
Confidence            33322100                                                 01123456789999999999999


Q ss_pred             CCCCCHHHHHc
Q 015532          375 AERLKAREALR  385 (405)
Q Consensus       375 ~~Rpta~elL~  385 (405)
                      ++|||++|+++
T Consensus       254 ~~Rps~~~~~~  264 (288)
T 3kfa_A          254 SDRPSFAEIHQ  264 (288)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.2e-39  Score=323.86  Aligned_cols=227  Identities=19%  Similarity=0.266  Sum_probs=174.0

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .+.++|++.++||+|+||.||+|++..+++.||||+++.... ...+..|+++++.|.|+++....              
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            456889999999999999999999999999999998865332 34578899999999987653221              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++|||||||||+||||+..                       
T Consensus        83 e~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-----------------------  139 (483)
T 3sv0_A           83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-----------------------  139 (483)
T ss_dssp             ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG-----------------------
T ss_pred             ECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC-----------------------
Confidence                          2458899999999999999999999999999999999999421                       


Q ss_pred             CCCCCCceeccCCCCccccCCc----------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                       +....+||+|||++.......          ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       140 -~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~  218 (483)
T 3sv0_A          140 -RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA  218 (483)
T ss_dssp             -GGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             -CCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence             123346666666665433221          245799999999999999999999999999999999999999987543


Q ss_pred             H---HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          291 L---EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       291 ~---~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .   +.+..+....                                             ...........++.++.+||.
T Consensus       219 ~~~~~~~~~i~~~~---------------------------------------------~~~~~~~l~~~~p~~l~~li~  253 (483)
T 3sv0_A          219 GTKKQKYEKISEKK---------------------------------------------VATSIEALCRGYPTEFASYFH  253 (483)
T ss_dssp             SSHHHHHHHHHHHH---------------------------------------------HHSCHHHHHTTSCHHHHHHHH
T ss_pred             hhHHHHHHHHhhcc---------------------------------------------ccccHHHHhcCCcHHHHHHHH
Confidence            2   2222221110                                             000011112345678999999


Q ss_pred             HccccCCCCCCCHHHHHc
Q 015532          368 GLLRYDPAERLKAREALR  385 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~  385 (405)
                      +||+.||++||++++|++
T Consensus       254 ~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          254 YCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHTCCTTCCCCHHHHHH
T ss_pred             HHhcCChhhCcCHHHHHH
Confidence            999999999999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=8.6e-40  Score=310.02  Aligned_cols=219  Identities=21%  Similarity=0.290  Sum_probs=168.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEE----EEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELV----AIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~v----AiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .++|++.+.||+|+||+||+|++..+++.|    |+|.++..  ....+.+.+|+.+++.+.|+++....          
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   93 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence            478999999999999999999998887765    66665432  23456788999999999999985432          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                  
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~------------------  155 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH------------------  155 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE------------------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCC------------------
Confidence                             235788999999999999999999999999999999999987664                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  291 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~  291 (405)
                               +||+|||++.......     ....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus       156 ---------~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~  226 (327)
T 3lzb_A          156 ---------VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS  226 (327)
T ss_dssp             ---------EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred             ---------EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence                     4555555554332211     12356788999999999999999999999999999999 99999887665


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+....                       ..                          ......+.++.+||.+||+
T Consensus       227 ~~~~~~~~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~~l~  257 (327)
T 3lzb_A          227 EISSILEKGE-----------------------RL--------------------------PQPPICTIDVYMIMRKCWM  257 (327)
T ss_dssp             GHHHHHHTTC-----------------------CC--------------------------CCCTTBCHHHHHHHHHHTC
T ss_pred             HHHHHHHcCC-----------------------CC--------------------------CCCccCCHHHHHHHHHHcC
Confidence            5443332211                       00                          0112346689999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .||++|||+.|+++
T Consensus       258 ~dp~~Rps~~ell~  271 (327)
T 3lzb_A          258 IDADSRPKFRELII  271 (327)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=6.8e-40  Score=308.16  Aligned_cols=237  Identities=17%  Similarity=0.221  Sum_probs=171.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecc-hhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~-~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ++|++.+.||+|+||+||+|++..+++.||+|++.. .....+.+.+|+++++.+.|+++....                
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            679999999999999999999999999999998854 334567788999999999999984321                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++............  
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--  167 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG--  167 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc--
Confidence                        245788999999999999999999999999999999999987776666666554332211100000  


Q ss_pred             CCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 015532          223 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG  302 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~~g  302 (405)
                            .  ...............||+.|+|||++.+..++.++|||||||++|+|++|..||..........       
T Consensus       168 ------~--~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------  232 (310)
T 3s95_A          168 ------L--RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------  232 (310)
T ss_dssp             --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------
T ss_pred             ------c--ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------
Confidence                  0  0000000011123579999999999999999999999999999999999999986532210000       


Q ss_pred             CCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHH
Q 015532          303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE  382 (405)
Q Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~e  382 (405)
                                                      .......        ........+++.+.+||.+||+.||++|||+.+
T Consensus       233 --------------------------------~~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~  272 (310)
T 3s95_A          233 --------------------------------GLNVRGF--------LDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVK  272 (310)
T ss_dssp             --------------------------------SBCHHHH--------HHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --------------------------------hhhhhcc--------ccccCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence                                            0000000        000112345678999999999999999999999


Q ss_pred             HHc
Q 015532          383 ALR  385 (405)
Q Consensus       383 lL~  385 (405)
                      +++
T Consensus       273 l~~  275 (310)
T 3s95_A          273 LEH  275 (310)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.5e-39  Score=320.10  Aligned_cols=244  Identities=24%  Similarity=0.293  Sum_probs=172.3

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCcc----------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRY----------  155 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~~----------  155 (405)
                      .+.+.+.|.+.+.||+|+||+||.+. ..+|+.||||++...  ..+.+.+|+.+|+.+ .|++++....          
T Consensus        10 ~~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l   86 (434)
T 2rio_A           10 EQSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI   86 (434)
T ss_dssp             SCSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred             hhhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence            34566788889999999999998754 467899999998653  245578899999987 7888754210          


Q ss_pred             ------c----------c-------CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          156 ------R----------S-------FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       156 ------~----------~-------l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                            +          .       .++..+..++.||+.||.|||++||+||||||+|||++..+.......       
T Consensus        87 v~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~-------  159 (434)
T 2rio_A           87 ALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ-------  159 (434)
T ss_dssp             EECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT-------
T ss_pred             EEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccc-------
Confidence                  0          0       122234679999999999999999999999999999987543211110       


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCc-------cceecCCCcchhHHHhC-------CCCCCchhHHHHHHHHHHH
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~~l  278 (405)
                             ..+.+..+||+|||++.......       ....||+.|+|||++.+       ..++.++|||||||++|+|
T Consensus       160 -------~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~el  232 (434)
T 2rio_A          160 -------TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI  232 (434)
T ss_dssp             -------TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHH
T ss_pred             -------cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHH
Confidence                   01234578999999887654322       23579999999999976       5689999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC
Q 015532          279 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  357 (405)
Q Consensus       279 lt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (405)
                      ++ |..||......+.  .+......                        .+.                   ........
T Consensus       233 lt~g~~Pf~~~~~~~~--~i~~~~~~------------------------~~~-------------------~~~~~~~~  267 (434)
T 2rio_A          233 LSKGKHPFGDKYSRES--NIIRGIFS------------------------LDE-------------------MKCLHDRS  267 (434)
T ss_dssp             HTTSCCTTCSTTTHHH--HHHHTCCC------------------------CCC-------------------CTTCCCHH
T ss_pred             HhCCCCCCCCchhhHH--HHhcCCCC------------------------ccc-------------------cccccccc
Confidence            99 9999976543321  11111000                        000                   00000112


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       358 ~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      .+.++.+||.+||+.||++|||+.|+++||||...
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            35689999999999999999999999999999753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=306.92  Aligned_cols=226  Identities=27%  Similarity=0.349  Sum_probs=160.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh---hhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||||++.....   ..+.+..+..+++.+.|+++....              
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            679999999999999999999999999999999965322   222333444567778888874321              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                   ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++                      
T Consensus       105 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~----------------------  162 (318)
T 2dyl_A          105 LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG----------------------  162 (318)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS----------------------
T ss_pred             ccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC----------------------
Confidence                         24578899999999999999999995 999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHE-NLE  292 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg~~pf~~~~-~~~  292 (405)
                           .+||+|||++......  .....||+.|+|||++.     +..++.++|||||||++|+|++|..||.... ..+
T Consensus       163 -----~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  237 (318)
T 2dyl_A          163 -----QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE  237 (318)
T ss_dssp             -----CEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred             -----CEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH
Confidence                 4566666666443222  22347899999999995     4568899999999999999999999998743 333


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+.....+                       ..                        .....++..+.+||.+||+.
T Consensus       238 ~~~~~~~~~~~-----------------------~~------------------------~~~~~~~~~l~~li~~~l~~  270 (318)
T 2dyl_A          238 VLTKVLQEEPP-----------------------LL------------------------PGHMGFSGDFQSFVKDCLTK  270 (318)
T ss_dssp             HHHHHHHSCCC-----------------------CC------------------------CSSSCCCHHHHHHHHHHTCS
T ss_pred             HHHHHhccCCC-----------------------CC------------------------CccCCCCHHHHHHHHHHccC
Confidence            33332221000                       00                        01123567899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTR  391 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~  391 (405)
                      ||++|||++|+++||||++
T Consensus       271 dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          271 DHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             CTTTSCCHHHHTTSHHHHH
T ss_pred             ChhHCcCHHHHhhCHHHHh
Confidence            9999999999999999975

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.3e-39  Score=313.88  Aligned_cols=220  Identities=18%  Similarity=0.303  Sum_probs=170.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEec-------CCCcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~-------~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------  154 (405)
                      .++|++.+.||+|+||.||+|++.       .++..||||+++..  ....+.+.+|+.+++.+ .|+++....      
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            368999999999999999999874       34567999999753  23456788999999999 788874311      


Q ss_pred             -------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          155 -------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       155 -------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                                                           ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  239 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  239 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence                                                 0136788899999999999999999999999999999999776


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                      +.                           +||+|||++......     .....+|+.|+|||++.+..++.++||||||
T Consensus       240 ~~---------------------------~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG  292 (370)
T 2psq_A          240 NV---------------------------MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  292 (370)
T ss_dssp             CC---------------------------EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHH
T ss_pred             CC---------------------------EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHH
Confidence            64                           455555555432221     1223567899999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|||++ |..||.+....+....+....                       ..                         
T Consensus       293 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~-----------------------~~-------------------------  324 (370)
T 2psq_A          293 VLMWEIFTLGGSPYPGIPVEELFKLLKEGH-----------------------RM-------------------------  324 (370)
T ss_dssp             HHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-----------------------CC-------------------------
T ss_pred             HHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-----------------------CC-------------------------
Confidence            99999999 999998876554443322110                       00                         


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                       .....++..+.+||.+||+.||++|||+.|++++
T Consensus       325 -~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          325 -DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             1122456789999999999999999999999863

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.2e-39  Score=307.55  Aligned_cols=232  Identities=16%  Similarity=0.227  Sum_probs=168.3

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecC---CCcEEEEEEecchhh------------hhHHHHHHHHHHHHHhhcCCCC
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINK------------YREAAMIEIDVLQRLARHDIGG  152 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~---~~~~vAiK~~~~~~~------------~~~~~~~E~~il~~l~~~~~~~  152 (405)
                      +...++|++.+.||+|+||.||+|++..   ++..||||++.....            ....+.+|+.++..+.|+++..
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            3445789999999999999999999987   788999999864321            1234566788888889998843


Q ss_pred             Cc------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccccccc
Q 015532          153 TR------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       153 ~~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~  202 (405)
                      ..                              ...+++..++.++.||+.||.|||++||+||||||+|||++.++    
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~----  188 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN----  188 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS----
T ss_pred             eecccccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC----
Confidence            21                              12578999999999999999999999999999999999998654    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                                           ...+||+|||++......          .....||+.|+|||++.+..++.++||||||
T Consensus       189 ---------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  247 (345)
T 2v62_A          189 ---------------------PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILG  247 (345)
T ss_dssp             ---------------------TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHH
T ss_pred             ---------------------CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHH
Confidence                                 124566666666433211          1335799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhh
Q 015532          273 CILVELCSGEALFQTH--ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL  350 (405)
Q Consensus       273 ~il~~lltg~~pf~~~--~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (405)
                      |++|+|++|..||.+.  ...............+|..+...                                       
T Consensus       248 ~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------  288 (345)
T 2v62_A          248 YCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKW---------------------------------------  288 (345)
T ss_dssp             HHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHH---------------------------------------
T ss_pred             HHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhh---------------------------------------
Confidence            9999999999999652  22222222223222333221100                                       


Q ss_pred             hhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       351 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                        .....++.++.+||.+||+.||++|||++++++
T Consensus       289 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          289 --APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             --SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             --ccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence              001245778999999999999999999999886

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.1e-39  Score=300.66  Aligned_cols=227  Identities=22%  Similarity=0.290  Sum_probs=167.9

Q ss_pred             eeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        85 ~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      ..++...++|++.++||+|+||+||+|++..   .||||+++..   ....+.+.+|+.+++.+.|+++....       
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ   93 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCc
Confidence            3456677899999999999999999998743   5999998643   23446688999999999999884321       


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..+..++.||+.||.|||++||+||||||+|||++.++.               
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~---------------  158 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---------------  158 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE---------------
T ss_pred             cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC---------------
Confidence                                235788999999999999999999999999999999999987664               


Q ss_pred             CCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHh---CCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                  ++|+|||++.....     ......||+.|+|||++.   +..++.++|||||||++|+|++|..||.
T Consensus       159 ------------~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  226 (289)
T 3og7_A          159 ------------VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS  226 (289)
T ss_dssp             ------------EEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             ------------EEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcc
Confidence                        45555555543221     112357899999999997   5568899999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +....+.+..+.......+                                            ........+++.+.+||
T Consensus       227 ~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~l~~li  262 (289)
T 3og7_A          227 NINNRDQIIEMVGRGSLSP--------------------------------------------DLSKVRSNCPKRMKRLM  262 (289)
T ss_dssp             SCCCHHHHHHHHHHTSCCC--------------------------------------------CTTSSCTTSCHHHHHHH
T ss_pred             ccchHHHHHHHhcccccCc--------------------------------------------chhhccccCCHHHHHHH
Confidence            8766554443322111000                                            00111234567899999


Q ss_pred             HHccccCCCCCCCHHHHHc
Q 015532          367 QGLLRYDPAERLKAREALR  385 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~  385 (405)
                      .+||+.||++|||+.++++
T Consensus       263 ~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          263 AECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhhCCCHHHHHH
Confidence            9999999999999999986

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=7e-40  Score=310.33  Aligned_cols=220  Identities=21%  Similarity=0.254  Sum_probs=168.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcE----EEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~----vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .++|++.+.||+|+||+||+|++..+++.    ||+|++....  .....+.+|+.+++.+.|+++....          
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL   91 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence            36899999999999999999999888775    7777764322  2234567899999999999984321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                  
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~------------------  153 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQ------------------  153 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSC------------------
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCe------------------
Confidence                             235788899999999999999999999999999999999976664                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  291 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~  291 (405)
                               +||+|||++......     .....||..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus       154 ---------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~  224 (325)
T 3kex_A          154 ---------VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA  224 (325)
T ss_dssp             ---------EEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT
T ss_pred             ---------EEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH
Confidence                     455555555433221     123467889999999999899999999999999999999 99999887655


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+....                       ...                          .....+..+.+||.+||+
T Consensus       225 ~~~~~~~~~~-----------------------~~~--------------------------~~~~~~~~~~~li~~~l~  255 (325)
T 3kex_A          225 EVPDLLEKGE-----------------------RLA--------------------------QPQICTIDVYMVMVKCWM  255 (325)
T ss_dssp             HHHHHHHTTC-----------------------BCC--------------------------CCTTBCTTTTHHHHHHTC
T ss_pred             HHHHHHHcCC-----------------------CCC--------------------------CCCcCcHHHHHHHHHHcC
Confidence            5443332210                       000                          112235577899999999


Q ss_pred             cCCCCCCCHHHHHcC
Q 015532          372 YDPAERLKAREALRH  386 (405)
Q Consensus       372 ~dP~~Rpta~elL~h  386 (405)
                      .||++|||+.|+++|
T Consensus       256 ~dp~~Rps~~el~~~  270 (325)
T 3kex_A          256 IDENIRPTFKELANE  270 (325)
T ss_dssp             SCTTTSCCHHHHHHH
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999999975

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.7e-39  Score=301.23  Aligned_cols=221  Identities=24%  Similarity=0.314  Sum_probs=167.7

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCC---CcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..++|++.+.||+|+||.||+|++..+   +..||||+++..  ....+.+.+|+.+++.+.|+++....          
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~l   92 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI   92 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEE
Confidence            457899999999999999999998654   457999998653  33456788999999999999884321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+                 
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~-----------------  155 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-----------------  155 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE-----------------
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCE-----------------
Confidence                             1247889999999999999999999999999999999999876654                 


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                                ||+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       156 ----------kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~  225 (281)
T 1mp8_A          156 ----------KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  225 (281)
T ss_dssp             ----------EECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             ----------EECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH
Confidence                      555555554332211    12356788999999998899999999999999999996 999998876655


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+....                       ..                          .....+++.+.+||.+||+.
T Consensus       226 ~~~~i~~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~~l~~  256 (281)
T 1mp8_A          226 VIGRIENGE-----------------------RL--------------------------PMPPNCPPTLYSLMTKCWAY  256 (281)
T ss_dssp             HHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCC-----------------------CC--------------------------CCCCCCCHHHHHHHHHHccC
Confidence            444332210                       00                          01134567899999999999


Q ss_pred             CCCCCCCHHHHHcC
Q 015532          373 DPAERLKAREALRH  386 (405)
Q Consensus       373 dP~~Rpta~elL~h  386 (405)
                      ||++|||+.|++++
T Consensus       257 ~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          257 DPSRRPRFTELKAQ  270 (281)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999863

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=3.9e-39  Score=296.80  Aligned_cols=227  Identities=23%  Similarity=0.300  Sum_probs=170.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-----hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++...     ...+.+.+|+++++.+.|+++....           
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            468999999999999999999975  7889999986432     2346678899999999999884321           


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELR---LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                     ...+++..++.++.||+.||.|||++|   |+||||||+|||++..+..                
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~----------------  147 (271)
T 3dtc_A           84 VMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN----------------  147 (271)
T ss_dssp             EEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS----------------
T ss_pred             EEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc----------------
Confidence                           246789999999999999999999999   9999999999999753210                


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc-cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                         ....+..++|+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       148 ---~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~  224 (271)
T 3dtc_A          148 ---GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY  224 (271)
T ss_dssp             ---SCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH
T ss_pred             ---ccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               00124568999999887544332 23579999999999999899999999999999999999999998877655443


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.....                                                .......+++.+.+||.+||+.||+
T Consensus       225 ~~~~~~~------------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~  256 (271)
T 3dtc_A          225 GVAMNKL------------------------------------------------ALPIPSTCPEPFAKLMEDCWNPDPH  256 (271)
T ss_dssp             HHHTSCC------------------------------------------------CCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hhhcCCC------------------------------------------------CCCCCcccCHHHHHHHHHHhcCCcc
Confidence            3221100                                                0011234567899999999999999


Q ss_pred             CCCCHHHHHcC
Q 015532          376 ERLKAREALRH  386 (405)
Q Consensus       376 ~Rpta~elL~h  386 (405)
                      +|||+.|+++|
T Consensus       257 ~Rps~~e~l~~  267 (271)
T 3dtc_A          257 SRPSFTNILDQ  267 (271)
T ss_dssp             GSCCHHHHHHH
T ss_pred             cCcCHHHHHHH
Confidence            99999999974

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=320.04  Aligned_cols=228  Identities=24%  Similarity=0.278  Sum_probs=165.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~----------------  154 (405)
                      .+|.+.+.||+|+||+||. ....+++.||||++....  .....+|+.+|+.+ .|++++...                
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~  100 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC  100 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence            4699999999999999764 344678899999986532  22356799999999 788885432                


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+.+..+..++.||+.||.|||++||+||||||+|||++.++.                      +.
T Consensus       101 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~----------------------~~  158 (432)
T 3p23_A          101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNA----------------------HG  158 (432)
T ss_dssp             SEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBT----------------------TT
T ss_pred             CCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCC----------------------CC
Confidence                       112344567789999999999999999999999999999964321                      12


Q ss_pred             CCCceeccCCCCccccCC------ccceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH  293 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~  293 (405)
                      ...++|+|||++......      ....+||+.|+|||++.+   ..++.++|||||||++|+|++ |..||........
T Consensus       159 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~  238 (432)
T 3p23_A          159 KIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA  238 (432)
T ss_dssp             BCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH
T ss_pred             ceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH
Confidence            345678888887654422      223579999999999974   467889999999999999999 9999965543322


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ..    ..+...                    ....                       ......+..+.+||.+||+.|
T Consensus       239 ~~----~~~~~~--------------------~~~~-----------------------~~~~~~~~~~~~li~~~L~~d  271 (432)
T 3p23_A          239 NI----LLGACS--------------------LDCL-----------------------HPEKHEDVIARELIEKMIAMD  271 (432)
T ss_dssp             HH----HTTCCC--------------------CTTS-----------------------CTTCHHHHHHHHHHHHHSCSS
T ss_pred             HH----HhccCC--------------------cccc-----------------------CccccccHHHHHHHHHHHhCC
Confidence            11    111000                    0000                       000122456889999999999


Q ss_pred             CCCCCCHHHHHcCCCCCC
Q 015532          374 PAERLKAREALRHPFFTR  391 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~  391 (405)
                      |++|||++|+++||||..
T Consensus       272 P~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          272 PQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             GGGSCCHHHHHTSTTTCC
T ss_pred             HhhCCCHHHHHhCccccC
Confidence            999999999999999975

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.4e-39  Score=310.09  Aligned_cols=220  Identities=20%  Similarity=0.303  Sum_probs=173.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC-------CcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~-------~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------  154 (405)
                      .++|++.++||+|+||.||+|++..+       +..||||+++..  ......+.+|+++++.+ .|+++....      
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            47899999999999999999997543       357999999653  23346688999999999 888874311      


Q ss_pred             -------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          155 -------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       155 -------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  227 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED  227 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC
Confidence                                                 0238899999999999999999999999999999999999766


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                      +.                           +||+|||++......     .....||+.|+|||++.+..++.++||||||
T Consensus       228 ~~---------------------------~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG  280 (382)
T 3tt0_A          228 NV---------------------------MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG  280 (382)
T ss_dssp             CC---------------------------EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred             Cc---------------------------EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHH
Confidence            54                           555666655433221     1224578899999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|+|++ |..||.+....+....+....                       ..                         
T Consensus       281 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~-----------------------~~-------------------------  312 (382)
T 3tt0_A          281 VLLWEIFTLGGSPYPGVPVEELFKLLKEGH-----------------------RM-------------------------  312 (382)
T ss_dssp             HHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-----------------------CC-------------------------
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----------------------CC-------------------------
Confidence            99999999 999998877665554432211                       00                         


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                       .....+++++.+||.+||+.||++|||+.|++++
T Consensus       313 -~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          313 -DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             -CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             1123456789999999999999999999999974

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=4e-39  Score=300.65  Aligned_cols=236  Identities=22%  Similarity=0.307  Sum_probs=170.2

Q ss_pred             cCCCeEEEeeeecccceeEEEEE----ecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~----~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..++|++.+.||+|+||+||+|+    +..+++.||||+++... ...+.+.+|+.+++.+.|+++....          
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence            35789999999999999999998    56789999999997533 3446788999999999999884321          


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+              
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~--------------  153 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV--------------  153 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE--------------
T ss_pred             eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeE--------------
Confidence                                1237888999999999999999999999999999999999876654              


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                                   ||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       154 -------------kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~  220 (295)
T 3ugc_A          154 -------------KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP  220 (295)
T ss_dssp             -------------EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred             -------------EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence                         555555554332211      1234677899999999999999999999999999999999998643


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      ...     .....+..+......  .........+.+                          ......+++++.+||.+
T Consensus       221 ~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~  267 (295)
T 3ugc_A          221 PAE-----FMRMIGNDKQGQMIV--FHLIELLKNNGR--------------------------LPRPDGCPDEIYMIMTE  267 (295)
T ss_dssp             HHH-----HHHHHCTTCCTHHHH--HHHHHHHHTTCC--------------------------CCCCTTCCHHHHHHHHH
T ss_pred             hHH-----HHhhhcCccccchhH--HHHHHHHhccCc--------------------------CCCCcCcCHHHHHHHHH
Confidence            211     111111111100000  000000011111                          11223567789999999


Q ss_pred             ccccCCCCCCCHHHHHc
Q 015532          369 LLRYDPAERLKAREALR  385 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~  385 (405)
                      ||+.||++|||+.|+++
T Consensus       268 ~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          268 CWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HSCSSGGGSCCHHHHHH
T ss_pred             HcCCChhhCCCHHHHHH
Confidence            99999999999999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=316.35  Aligned_cols=253  Identities=20%  Similarity=0.312  Sum_probs=177.1

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..+.++|++.+.||+|+||+||+|++..+++.||||+++...  ...+.+.+|+++++.+.|+++....           
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~   84 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK   84 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence            445678999999999999999999999999999999997533  3346678999999999999874321           


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||+....               
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---------------  149 (396)
T 4eut_A           85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE---------------  149 (396)
T ss_dssp             EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECT---------------
T ss_pred             EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecC---------------
Confidence                                 01288999999999999999999999999999999999983211               


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhC--------CCCCCchhHHHHHHHHHHHHhCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG--------LGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                              +.+..+||+|||++.......  ....||+.|+|||++.+        ..++.++|||||||++|+|++|..
T Consensus       150 --------~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~  221 (396)
T 4eut_A          150 --------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL  221 (396)
T ss_dssp             --------TSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             --------CCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCC
Confidence                    123356777777776543322  23579999999999875        457789999999999999999999


Q ss_pred             CCCCCCh-HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHH
Q 015532          284 LFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  362 (405)
Q Consensus       284 pf~~~~~-~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  362 (405)
                      ||..... ......+.+.....|...+.....      .......|.....                .........+..+
T Consensus       222 Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~~~~~~~~~~~----------------~~~~l~~~~~~~l  279 (396)
T 4eut_A          222 PFRPFEGPRRNKEVMYKIITGKPSGAISGVQK------AENGPIDWSGDMP----------------VSCSLSRGLQVLL  279 (396)
T ss_dssp             SEECTTCTTTCHHHHHHHHHSCCTTCCEEEEC------STTCCEEEESSCC----------------TTCSSCHHHHHHH
T ss_pred             CCCCCCcccchHHHHHHHhcCCCcccchhhee------ccCCCcccCccCC----------------cccccchHHHhhc
Confidence            9965322 111222222222222211000000      0000111111000                0001112346688


Q ss_pred             HHHHHHccccCCCCCCCHHHHHc
Q 015532          363 IDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       363 ~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .+||.+||++||++|||++|+++
T Consensus       280 ~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          280 TPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             hHHHHHhhccChhhhccHHHHHH
Confidence            99999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=9.3e-40  Score=309.54  Aligned_cols=232  Identities=25%  Similarity=0.410  Sum_probs=155.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHH-HHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEID-VLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~-il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...  .....+..|+. +++.+.|+++....             
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            478999999999999999999999999999999996532  23344555665 66777888874321             


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                        ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++.                
T Consensus       101 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~----------------  164 (327)
T 3aln_A          101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN----------------  164 (327)
T ss_dssp             CCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTE----------------
T ss_pred             eecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCC----------------
Confidence                              24578889999999999999999998 9999999999999987664                


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHH----hCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                 +||+|||++.......  ....||+.|+|||++    .+..++.++|||||||++|+|++|..||.+..
T Consensus       165 -----------~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  233 (327)
T 3aln_A          165 -----------IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN  233 (327)
T ss_dssp             -----------EEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred             -----------EEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence                       5666666654433221  224689999999998    45568999999999999999999999997643


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ...  ..+.....                    +..                      +.........+++.+.+||.+|
T Consensus       234 ~~~--~~~~~~~~--------------------~~~----------------------~~~~~~~~~~~~~~l~~li~~~  269 (327)
T 3aln_A          234 SVF--DQLTQVVK--------------------GDP----------------------PQLSNSEEREFSPSFINFVNLC  269 (327)
T ss_dssp             --------CCCCC--------------------SCC----------------------CCCCCCSSCCCCHHHHHHHHHH
T ss_pred             hHH--HHHHHHhc--------------------CCC----------------------CCCCCcccccCCHHHHHHHHHH
Confidence            211  00000000                    000                      0000111234577899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      |+.||++|||+.|+++||||....
T Consensus       270 l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          270 LTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             TCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             hhCChhhCcCHHHHHhChHHHHhH
Confidence            999999999999999999997643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=9e-39  Score=295.78  Aligned_cols=219  Identities=22%  Similarity=0.351  Sum_probs=175.0

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..++|++.+.||+|+||.||+|.+. +++.||||+++......+.+.+|+++++.+.|+++....               
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   89 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM   89 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecC
Confidence            3468999999999999999999975 567899999977665677889999999999999874321               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++.++                       
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------------------  146 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL-----------------------  146 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-----------------------
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCC-----------------------
Confidence                         01578899999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                          .++|+|||++.......    ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+....
T Consensus       147 ----~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  222 (279)
T 1qpc_A          147 ----SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN  222 (279)
T ss_dssp             ----CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             ----CEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH
Confidence                45666666665433221    12356788999999998889999999999999999999 9999988776655444


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+...                       .                          .....++..+.+||.+||..||++
T Consensus       223 ~~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~~l~~~p~~  253 (279)
T 1qpc_A          223 LERGYR-----------------------M--------------------------VRPDNCPEELYQLMRLCWKERPED  253 (279)
T ss_dssp             HHTTCC-----------------------C--------------------------CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhcccC-----------------------C--------------------------CCcccccHHHHHHHHHHhccChhh
Confidence            322100                       0                          011244678999999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      |||++++++
T Consensus       254 Rps~~~l~~  262 (279)
T 1qpc_A          254 RPTFDYLRS  262 (279)
T ss_dssp             SCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            999999886

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.7e-39  Score=314.10  Aligned_cols=218  Identities=19%  Similarity=0.296  Sum_probs=171.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ++|++.+.||+|+||.||+|++..+++.||||+++..  ....+.+.+|+++|+.+.|+++....               
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  193 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL  193 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence            6799999999999999999999989999999998653  22345677899999999999984321               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||               
T Consensus       194 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG---------------  258 (377)
T 3cbl_A          194 VQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG---------------  258 (377)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGG---------------
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCC---------------
Confidence                         1247889999999999999999999999999999999999876655555554               


Q ss_pred             CCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  295 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~  295 (405)
                                  ++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+...
T Consensus       259 ------------~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~  326 (377)
T 3cbl_A          259 ------------MSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE  326 (377)
T ss_dssp             ------------GCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH
T ss_pred             ------------CceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence                        443322111     11235778999999998889999999999999999998 999998877655444


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+...                       .+...                          +..+++.+.+||.+||+.||+
T Consensus       327 ~~~~~-----------------------~~~~~--------------------------~~~~~~~l~~li~~cl~~dP~  357 (377)
T 3cbl_A          327 FVEKG-----------------------GRLPC--------------------------PELCPDAVFRLMEQCWAYEPG  357 (377)
T ss_dssp             HHHTT-----------------------CCCCC--------------------------CTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHcC-----------------------CCCCC--------------------------CCCCCHHHHHHHHHHcCCCch
Confidence            33221                       11111                          123466899999999999999


Q ss_pred             CCCCHHHHHc
Q 015532          376 ERLKAREALR  385 (405)
Q Consensus       376 ~Rpta~elL~  385 (405)
                      +|||++++++
T Consensus       358 ~Rps~~~i~~  367 (377)
T 3cbl_A          358 QRPSFSTIYQ  367 (377)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999985

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.8e-39  Score=294.91  Aligned_cols=218  Identities=23%  Similarity=0.331  Sum_probs=174.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.+.||+|+||.||+|.+. +++.||||+++......+.+.+|+.+++.+.|+++....                 
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            57999999999999999999986 567899999987665667889999999999999874311                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||++||+||||||+||+++.++.                        
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~------------------------  142 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV------------------------  142 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGC------------------------
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCC------------------------
Confidence                       134788999999999999999999999999999999999977664                        


Q ss_pred             CCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                         ++|+|||++......    .....+|..|+|||++.+..++.++|||||||++|+|++ |..||......+....+.
T Consensus       143 ---~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~  219 (267)
T 3t9t_A          143 ---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS  219 (267)
T ss_dssp             ---EEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             ---EEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh
Confidence               555555555433221    112356788999999998899999999999999999999 999998877665554432


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .....                                                 ......+..+.+||.+||+.||++||
T Consensus       220 ~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rp  250 (267)
T 3t9t_A          220 TGFRL-------------------------------------------------YKPRLASTHVYQIMNHCWRERPEDRP  250 (267)
T ss_dssp             TTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCcC-------------------------------------------------CCCccCcHHHHHHHHHHccCChhhCc
Confidence            21100                                                 01123466899999999999999999


Q ss_pred             CHHHHHcC
Q 015532          379 KAREALRH  386 (405)
Q Consensus       379 ta~elL~h  386 (405)
                      |+.+++++
T Consensus       251 s~~~ll~~  258 (267)
T 3t9t_A          251 AFSRLLRQ  258 (267)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.8e-39  Score=307.68  Aligned_cols=229  Identities=18%  Similarity=0.272  Sum_probs=175.5

Q ss_pred             ccCCCeEEEeeeecccceeEEEEE-----ecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~-----~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      ...++|++.+.||+|+||.||+|+     +..+++.||||++...  ......+.+|+.+++.+.|+++....       
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            345789999999999999999999     5567889999999542  33456688899999999999874321       


Q ss_pred             ---------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          155 ---------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       155 ---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                                                 ...+++..++.++.||+.||.|||++||+||||||+|||++.++         
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~---------  177 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG---------  177 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS---------
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC---------
Confidence                                       02378889999999999999999999999999999999997543         


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-C
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G  281 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g  281 (405)
                                     ....++|+|||++.....     ......||+.|+|||++.+..++.++|||||||++|+|++ |
T Consensus       178 ---------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  242 (327)
T 2yfx_A          178 ---------------PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG  242 (327)
T ss_dssp             ---------------TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ---------------CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCC
Confidence                           233577777776653221     1123467889999999999899999999999999999998 9


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ..||......+....+.....                       .                          .....++..
T Consensus       243 ~~p~~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~  273 (327)
T 2yfx_A          243 YMPYPSKSNQEVLEFVTSGGR-----------------------M--------------------------DPPKNCPGP  273 (327)
T ss_dssp             CCSSTTCCHHHHHHHHHTTCC-----------------------C--------------------------CCCTTCCHH
T ss_pred             CCCCCCcCHHHHHHHHhcCCC-----------------------C--------------------------CCCCCCCHH
Confidence            999988776655443322100                       0                          011234678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~  390 (405)
                      +.+||.+||+.||++|||+.++++|.|+-
T Consensus       274 l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          274 VYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999999988764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1e-38  Score=307.04  Aligned_cols=229  Identities=15%  Similarity=0.208  Sum_probs=163.4

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCC-----CcEEEEEEecchhhh------------hHHHHHHHHHHHHHhhcCC
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSINKY------------REAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~-----~~~vAiK~~~~~~~~------------~~~~~~E~~il~~l~~~~~  150 (405)
                      +...++|++.+.||+|+||.||+|.+..+     ++.||||++......            ......|+..+..+.|+++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            34456899999999999999999998764     578999998653211            1122234444555567776


Q ss_pred             CCCc-------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEe--cc
Q 015532          151 GGTR-------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV--SA  197 (405)
Q Consensus       151 ~~~~-------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~--~~  197 (405)
                      ....                               ...+++..++.++.||+.||.|||++||+||||||+|||++  .+
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~  190 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP  190 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT
T ss_pred             CeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC
Confidence            4321                               14589999999999999999999999999999999999998  44


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchh
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCD  267 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~D  267 (405)
                      +                           .+||+|||++......          .....||+.|+|||++.+..++.++|
T Consensus       191 ~---------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  243 (364)
T 3op5_A          191 D---------------------------QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGD  243 (364)
T ss_dssp             T---------------------------CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHH
T ss_pred             C---------------------------eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhh
Confidence            4                           4566666665432211          12346999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhcc
Q 015532          268 LWSVGCILVELCSGEALFQTHENLEH-LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  346 (405)
Q Consensus       268 iwSlG~il~~lltg~~pf~~~~~~~~-~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (405)
                      ||||||++|+|++|..||.+...... ...........                                          
T Consensus       244 i~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~------------------------------------------  281 (364)
T 3op5_A          244 LEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYREN------------------------------------------  281 (364)
T ss_dssp             HHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHC------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhh------------------------------------------
Confidence            99999999999999999986432222 21111110000                                          


Q ss_pred             chhhhhhc--ccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          347 LPNLIMQH--VDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       347 ~~~~~~~~--~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      ........  ....+.++.+||..||..||++||++.++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          282 IASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            00000000  1345678999999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=5.3e-40  Score=310.80  Aligned_cols=237  Identities=22%  Similarity=0.209  Sum_probs=168.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||+||+|++.  ++.||||+++...........|+.++..+.|+++....                 
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            57999999999999999999875  78999999977666666677799999999999984321                 


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHC----------CcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHEL----------RLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~----------givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                   ...+++..++.++.||+.||.|||++          ||+||||||+|||++.++             
T Consensus       102 e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~-------------  168 (322)
T 3soc_A          102 AFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL-------------  168 (322)
T ss_dssp             ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC-------------
T ss_pred             ecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC-------------
Confidence                         13478899999999999999999999          999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCC-----CCCCchhHHHHHHHHHHHHhC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~~lltg  281 (405)
                                    .+||+|||++......     .....||+.|+|||++.+.     .++.++|||||||++|+|++|
T Consensus       169 --------------~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg  234 (322)
T 3soc_A          169 --------------TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR  234 (322)
T ss_dssp             --------------CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --------------eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhC
Confidence                          4566666666433221     1225799999999999873     455788999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhh-cccCchH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ-HVDHSAG  360 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  360 (405)
                      ..||.+.......................      ........+                      +..... .....+.
T Consensus       235 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~----------------------~~~~~~~~~~~~~~  286 (322)
T 3soc_A          235 CTAADGPVDEYMLPFEEEIGQHPSLEDMQ------EVVVHKKKR----------------------PVLRDYWQKHAGMA  286 (322)
T ss_dssp             BTTSSSCCCCCCCTTHHHHCSSCCHHHHH------HHHTTSCCC----------------------CCCCGGGGSSHHHH
T ss_pred             CCCCCCCcchhccchhhhhccCCchhhhh------hhhhcccCC----------------------CCccccccccchHH
Confidence            99997654321111111111110000000      000000000                      000000 0112345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHc
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .+.+||.+||+.||++|||+.|+++
T Consensus       287 ~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          287 MLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            6999999999999999999999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=299.31  Aligned_cols=218  Identities=25%  Similarity=0.334  Sum_probs=164.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.+.||+|+||+||+|++.  ++.||||++... ...+.+.+|+++++++.|+++....                 
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~   84 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGG   84 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCC
Confidence            57999999999999999999975  788999999653 3456788999999999999884321                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHE---LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                 ...+++..+..++.||+.||.|||+   +||+||||||+|||++.++.                     
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~---------------------  143 (307)
T 2eva_A           85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT---------------------  143 (307)
T ss_dssp             BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT---------------------
T ss_pred             CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC---------------------
Confidence                       1235788899999999999999999   89999999999999976542                     


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||...............
T Consensus       144 -----~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  218 (307)
T 2eva_A          144 -----VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH  218 (307)
T ss_dssp             -----EEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH
T ss_pred             -----EEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh
Confidence                 257788887765544444557999999999999989999999999999999999999999754322111000000


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      .+..                                               ......++..+.+||.+||+.||++|||+
T Consensus       219 ~~~~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~  251 (307)
T 2eva_A          219 NGTR-----------------------------------------------PPLIKNLPKPIESLMTRCWSKDPSQRPSM  251 (307)
T ss_dssp             TTCC-----------------------------------------------CCCBTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             cCCC-----------------------------------------------CCcccccCHHHHHHHHHHhcCChhhCcCH
Confidence            0000                                               01123456789999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      +++++
T Consensus       252 ~ell~  256 (307)
T 2eva_A          252 EEIVK  256 (307)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=8.1e-39  Score=296.49  Aligned_cols=220  Identities=24%  Similarity=0.318  Sum_probs=170.2

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC---CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~---~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .++|++.+.||+|+||+||+|++..   ++..||||+++..  ....+.+.+|+.+++.+.|+++....           
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v   90 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII   90 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence            3679999999999999999998653   3456999998753  23456788999999999999884321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+|++               
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~---------------  155 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG---------------  155 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEEC---------------
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeC---------------
Confidence                            1347888999999999999999999999999999999999877655554               


Q ss_pred             cCCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH  293 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~  293 (405)
                                  |||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||......+.
T Consensus       156 ------------Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~  223 (281)
T 3cc6_A          156 ------------DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV  223 (281)
T ss_dssp             ------------CCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH
T ss_pred             ------------ccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH
Confidence                        55544332221    122356788999999998899999999999999999998 9999987665554


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      ...+.....                       .                          .....+++.+.+||.+||..|
T Consensus       224 ~~~~~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~~l~~~  254 (281)
T 3cc6_A          224 IGVLEKGDR-----------------------L--------------------------PKPDLCPPVLYTLMTRCWDYD  254 (281)
T ss_dssp             HHHHHHTCC-----------------------C--------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCCC-----------------------C--------------------------CCCCCCCHHHHHHHHHHccCC
Confidence            433322110                       0                          011234678999999999999


Q ss_pred             CCCCCCHHHHHcC
Q 015532          374 PAERLKAREALRH  386 (405)
Q Consensus       374 P~~Rpta~elL~h  386 (405)
                      |++|||+.|++++
T Consensus       255 p~~Rps~~ell~~  267 (281)
T 3cc6_A          255 PSDRPRFTELVCS  267 (281)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             chhCcCHHHHHHH
Confidence            9999999999864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=5.2e-39  Score=318.07  Aligned_cols=225  Identities=24%  Similarity=0.365  Sum_probs=178.8

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ..++|++.+.||+|+||.||+|.+. ++..||||+++......+.+.+|+.+|+.+.|+++....               
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~  264 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFM  264 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred             chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeec
Confidence            3468999999999999999999985 467799999987666678899999999999999884321               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+|||++.++                       
T Consensus       265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----------------------  321 (454)
T 1qcf_A          265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL-----------------------  321 (454)
T ss_dssp             TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTC-----------------------
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCC-----------------------
Confidence                         12467888999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                          .+||+|||++......    .....+|..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....
T Consensus       322 ----~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~  397 (454)
T 1qcf_A          322 ----VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA  397 (454)
T ss_dssp             ----CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             ----cEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence                4566666666543221    112346778999999998899999999999999999999 9999998877766655


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+...                       .                          ..+..+++.+.+||.+||..||++
T Consensus       398 i~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~cl~~dp~~  428 (454)
T 1qcf_A          398 LERGYR-----------------------M--------------------------PRPENCPEELYNIMMRCWKNRPEE  428 (454)
T ss_dssp             HHHTCC-----------------------C--------------------------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHcCCC-----------------------C--------------------------CCCCCCCHHHHHHHHHHccCChhH
Confidence            433210                       0                          011245678999999999999999


Q ss_pred             CCCHHHHHc--CCCCCC
Q 015532          377 RLKAREALR--HPFFTR  391 (405)
Q Consensus       377 Rpta~elL~--hp~f~~  391 (405)
                      |||++++++  ..++..
T Consensus       429 RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          429 RPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             SCCHHHHHHHHHTSSSS
T ss_pred             CcCHHHHHHHHHHHHhc
Confidence            999999975  344443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=5.6e-39  Score=304.76  Aligned_cols=231  Identities=25%  Similarity=0.339  Sum_probs=153.1

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHh-hcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLA-RHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~-~~~~~~~~--------------  154 (405)
                      ..+|++.++||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++++. |+++....              
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            358999999999999999999999999999999885433 34566788999999996 88875321              


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccc
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                             ...+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++.
T Consensus       107 ~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          107 AEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT  186 (337)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred             ceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence                                   124788999999999999999999999  9999999999999877766555555443


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCC-CccccCCccceecCCCcchhHHH---hCCCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~-a~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                      .........             +.. ............||+.|+|||++   .+..++.++|||||||++|+|++|..||
T Consensus       187 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~  253 (337)
T 3ll6_A          187 TISHYPDYS-------------WSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF  253 (337)
T ss_dssp             CCSSCC--------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             eccccCccc-------------ccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCC
Confidence            222111000             000 00000111234689999999998   4567889999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHH
Q 015532          286 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  365 (405)
Q Consensus       286 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  365 (405)
                      ...........   .                         ...                        ......+..+.+|
T Consensus       254 ~~~~~~~~~~~---~-------------------------~~~------------------------~~~~~~~~~~~~l  281 (337)
T 3ll6_A          254 EDGAKLRIVNG---K-------------------------YSI------------------------PPHDTQYTVFHSL  281 (337)
T ss_dssp             ----------------------------------------CCC------------------------CTTCCSSGGGHHH
T ss_pred             cchhHHHhhcC---c-------------------------ccC------------------------CcccccchHHHHH
Confidence            75433221110   0                         000                        0012334568899


Q ss_pred             HHHccccCCCCCCCHHHHHcC
Q 015532          366 LQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       366 l~~~L~~dP~~Rpta~elL~h  386 (405)
                      |.+||+.||++|||+.|+++|
T Consensus       282 i~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          282 IRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.6e-39  Score=300.78  Aligned_cols=226  Identities=23%  Similarity=0.302  Sum_probs=164.9

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHH--HhhcCCCCCc----------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTR----------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~--l~~~~~~~~~----------  154 (405)
                      ++.+.++|++.+.||+|+||+||+|++  +++.||||++....  ...+..|.+++..  +.|+++....          
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~   78 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSS   78 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence            345678999999999999999999987  58899999996543  3445667777777  7898874321          


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHH--------HCCcEecCCCCCcEEEecccccccCCcc
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMH--------ELRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH--------~~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                                          ...+++..+..++.||+.||.|||        ++||+||||||+|||++.++        
T Consensus        79 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~--------  150 (301)
T 3q4u_A           79 TQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG--------  150 (301)
T ss_dssp             EEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS--------
T ss_pred             ceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC--------
Confidence                                135788999999999999999999        99999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-------cceecCCCcchhHHHhCC------CCCCchhHHHHHH
Q 015532          207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGL------GWNYPCDLWSVGC  273 (405)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~  273 (405)
                                         .+||+|||++.......       ....||+.|+|||++.+.      .++.++|||||||
T Consensus       151 -------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~  211 (301)
T 3q4u_A          151 -------------------QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL  211 (301)
T ss_dssp             -------------------CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHH
T ss_pred             -------------------CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHH
Confidence                               45666666664332221       224799999999999876      3457899999999


Q ss_pred             HHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHH
Q 015532          274 ILVELCSG----------EALFQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR  339 (405)
Q Consensus       274 il~~lltg----------~~pf~~~~~----~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (405)
                      ++|+|++|          ..||.....    ......+....+.                     ....+.         
T Consensus       212 il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~---------  261 (301)
T 3q4u_A          212 VLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ---------------------RPNIPN---------  261 (301)
T ss_dssp             HHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC---------------------CCCCCG---------
T ss_pred             HHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCC---------------------CCCCCh---------
Confidence            99999999          788854321    1111111110000                     000000         


Q ss_pred             HHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                                  .......+..+.+||.+||+.||++|||+.|+++
T Consensus       262 ------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          262 ------------RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             ------------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ------------hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                        0011234568999999999999999999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4.1e-39  Score=322.01  Aligned_cols=219  Identities=17%  Similarity=0.315  Sum_probs=175.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ...|++.++||+|+||.||+|++..++..||||+++......+.+.+|+.+|+++.|++++...                
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            4679999999999999999999998899999999987666678899999999999999984321                


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                      
T Consensus       299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~----------------------  356 (495)
T 1opk_A          299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL----------------------  356 (495)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC----------------------
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCc----------------------
Confidence                         134788899999999999999999999999999999999987665                      


Q ss_pred             CCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                           +||+|||++.......    ....++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....
T Consensus       357 -----~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~  431 (495)
T 1opk_A          357 -----VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL  431 (495)
T ss_dssp             -----EEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             -----EEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence                 4555555554332211    12346778999999998899999999999999999999 9999988765544433


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....                       +.                          ..+..+++.+.+||.+||+.||++
T Consensus       432 ~~~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~cl~~dP~~  462 (495)
T 1opk_A          432 LEKDY-----------------------RM--------------------------ERPEGCPEKVYELMRACWQWNPSD  462 (495)
T ss_dssp             HHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHcCC-----------------------CC--------------------------CCCCCCCHHHHHHHHHHcCcChhH
Confidence            32110                       00                          112345678999999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      |||+.++++
T Consensus       463 RPs~~el~~  471 (495)
T 1opk_A          463 RPSFAEIHQ  471 (495)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999986

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=4.8e-39  Score=302.49  Aligned_cols=220  Identities=20%  Similarity=0.323  Sum_probs=171.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      .++|++.+.||+|+||.||+|.+.     .+++.||||+++..  ....+.+.+|+++++.+.|+++....         
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            467999999999999999999983     45689999999653  23446678899999999999884321         


Q ss_pred             ------------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcE
Q 015532          155 ------------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  192 (405)
Q Consensus       155 ------------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  192 (405)
                                                                ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NI  181 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI  181 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheE
Confidence                                                      01278889999999999999999999999999999999


Q ss_pred             EEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchh
Q 015532          193 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  267 (405)
Q Consensus       193 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  267 (405)
                      |++.++.                           ++|+|||++.......     ....+|+.|+|||++.+..++.++|
T Consensus       182 li~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  234 (314)
T 2ivs_A          182 LVAEGRK---------------------------MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD  234 (314)
T ss_dssp             EEETTTE---------------------------EEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHH
T ss_pred             EEcCCCC---------------------------EEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhh
Confidence            9987664                           4555555554332211     1235678899999999988999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhcc
Q 015532          268 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  346 (405)
Q Consensus       268 iwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (405)
                      ||||||++|+|++ |..||.+.........+....                       .                     
T Consensus       235 i~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-----------------------~---------------------  270 (314)
T 2ivs_A          235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-----------------------R---------------------  270 (314)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-----------------------C---------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC-----------------------c---------------------
Confidence            9999999999999 999998776544433322110                       0                     


Q ss_pred             chhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       347 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                           ......+++.+.+||.+||+.||++|||+.|++++
T Consensus       271 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          271 -----MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                 01123456789999999999999999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1e-38  Score=315.51  Aligned_cols=215  Identities=20%  Similarity=0.299  Sum_probs=171.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.+.||+|+||.||+|.+.  ++.||||+++... ..+.+.+|+.+|+++.|+++....                 
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~  269 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM  269 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred             HHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence            67999999999999999999985  7789999997644 457789999999999999984321                 


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+|||++.++                       
T Consensus       270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----------------------  326 (450)
T 1k9a_A          270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------------------  326 (450)
T ss_dssp             TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTS-----------------------
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCC-----------------------
Confidence                         01268889999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                          .+||+|||++...........++..|+|||++.+..++.++|||||||++|||++ |..||.+....+....+.+.
T Consensus       327 ----~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~  402 (450)
T 1k9a_A          327 ----VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG  402 (450)
T ss_dssp             ----CEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT
T ss_pred             ----CEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence                4677777776644433333467889999999999999999999999999999998 99999876655544333221


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                                             .+.                          ..+..+++.+.+||.+||+.||++|||+
T Consensus       403 -----------------------~~~--------------------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~  433 (450)
T 1k9a_A          403 -----------------------YKM--------------------------DAPDGCPPAVYDVMKNCWHLDAATRPTF  433 (450)
T ss_dssp             -----------------------CCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             -----------------------CCC--------------------------CCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence                                   011                          1123456789999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      .++++
T Consensus       434 ~~l~~  438 (450)
T 1k9a_A          434 LQLRE  438 (450)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.4e-38  Score=299.07  Aligned_cols=224  Identities=28%  Similarity=0.425  Sum_probs=164.2

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      +....++|++.+.||+|+||.||+|.+..+++.||||+++..    ....+.+.+|+.+++.+.|+++....        
T Consensus        27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~  106 (310)
T 2wqm_A           27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE  106 (310)
T ss_dssp             TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCc
Confidence            444557899999999999999999999999999999999642    33456788999999999999884321        


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..++.++.||+.||.|||++||+||||||+||+++.++.            
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~------------  174 (310)
T 2wqm_A          107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV------------  174 (310)
T ss_dssp             EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC------------
T ss_pred             EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCC------------
Confidence                                   123788899999999999999999999999999999999976554            


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                                     ++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       175 ---------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          175 ---------------VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             ---------------EEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             ---------------EEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence                           566666665443222   12346899999999999989999999999999999999999999764


Q ss_pred             Ch--HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          289 EN--LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       289 ~~--~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      ..  ......+...  .                        ++                   .   .....++..+.+||
T Consensus       240 ~~~~~~~~~~~~~~--~------------------------~~-------------------~---~~~~~~~~~l~~li  271 (310)
T 2wqm_A          240 KMNLYSLCKKIEQC--D------------------------YP-------------------P---LPSDHYSEELRQLV  271 (310)
T ss_dssp             -CCHHHHHHHHHTT--C------------------------SC-------------------C---CCTTTSCHHHHHHH
T ss_pred             chhHHHHHHHhhcc--c------------------------CC-------------------C---CcccccCHHHHHHH
Confidence            32  1111111110  0                        00                   0   00123567899999


Q ss_pred             HHccccCCCCCCCHHHHHc
Q 015532          367 QGLLRYDPAERLKAREALR  385 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~  385 (405)
                      .+||..||++|||+.++++
T Consensus       272 ~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          272 NMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhhCCCHHHHHH
Confidence            9999999999999999986

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-38  Score=304.06  Aligned_cols=221  Identities=18%  Similarity=0.254  Sum_probs=169.0

Q ss_pred             CCCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~--------  154 (405)
                      .++|++.+.||+|+||.||+|++.     .+++.||||+++..  ....+.+.+|+.+++++ .|+++....        
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            368999999999999999999973     45678999999643  23456788999999999 888874311        


Q ss_pred             --------------------c----------------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcE
Q 015532          155 --------------------Y----------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  192 (405)
Q Consensus       155 --------------------~----------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  192 (405)
                                          .                      ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NI  203 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV  203 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhE
Confidence                                0                      1268889999999999999999999999999999999


Q ss_pred             EEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchh
Q 015532          193 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCD  267 (405)
Q Consensus       193 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  267 (405)
                      |++.++.+||+|||                           ++......     .....||+.|+|||++.+..++.++|
T Consensus       204 ll~~~~~~kL~Dfg---------------------------~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  256 (344)
T 1rjb_A          204 LVTHGKVVKICDFG---------------------------LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD  256 (344)
T ss_dssp             EEETTTEEEECCCG---------------------------GGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             EEcCCCcEEeCCCc---------------------------cCcccccCccceeccCccCccCccCHHHhccCCCChhHh
Confidence            99877655555555                           44322211     12246788999999999989999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhcc
Q 015532          268 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  346 (405)
Q Consensus       268 iwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (405)
                      ||||||++|+|++ |..||.+......+..+....                      ...                    
T Consensus       257 i~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~----------------------~~~--------------------  294 (344)
T 1rjb_A          257 VWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG----------------------FKM--------------------  294 (344)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTT----------------------CCC--------------------
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcC----------------------CCC--------------------
Confidence            9999999999998 999998765443332221110                      000                    


Q ss_pred             chhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       347 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                            ......++.+.+||.+||+.||++|||+.|+++|
T Consensus       295 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          295 ------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                  1112346789999999999999999999999985

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=6.4e-39  Score=305.52  Aligned_cols=221  Identities=19%  Similarity=0.262  Sum_probs=173.6

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      ...++|++.+.||+|+||.||+|++.     .+++.||||+++..  ....+.+.+|+.+++.+.|+++....       
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  123 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK  123 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence            34578999999999999999999987     34589999999653  23456788999999999999874311       


Q ss_pred             --------------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCC
Q 015532          155 --------------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE  190 (405)
Q Consensus       155 --------------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~  190 (405)
                                                                  ...+++.+++.++.||+.||.|||++||+||||||+
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~  203 (343)
T 1luf_A          124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR  203 (343)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcc
Confidence                                                        035788899999999999999999999999999999


Q ss_pred             cEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCCCCc
Q 015532          191 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYP  265 (405)
Q Consensus       191 NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~  265 (405)
                      |||++.++.                           +||+|||++.....     ......||+.|+|||++.+..++.+
T Consensus       204 NIl~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  256 (343)
T 1luf_A          204 NCLVGENMV---------------------------VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE  256 (343)
T ss_dssp             GEEECGGGC---------------------------EEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHH
T ss_pred             eEEECCCCe---------------------------EEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcc
Confidence            999987664                           55555555543211     1122467889999999999899999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHh
Q 015532          266 CDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL  344 (405)
Q Consensus       266 ~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (405)
                      +|||||||++|+|++ |..||.+....+....+....  .                     .                  
T Consensus       257 ~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~---------------------~------------------  295 (343)
T 1luf_A          257 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN--I---------------------L------------------  295 (343)
T ss_dssp             HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--C---------------------C------------------
T ss_pred             cccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCC--c---------------------C------------------
Confidence            999999999999999 999998877665554432210  0                     0                  


Q ss_pred             ccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       345 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                              .....++..+.+||.+||+.||++|||+.++++
T Consensus       296 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          296 --------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                    011245678999999999999999999999986

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-38  Score=295.24  Aligned_cols=219  Identities=25%  Similarity=0.332  Sum_probs=172.3

Q ss_pred             CCeEEEe-eeecccceeEEEEEec--CCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILS-KMGEGTFGQVVECFDN--EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~-~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|.+.+ .||+|+||.||+|.+.  .+++.||||+++..  ....+.+.+|+.+++.+.|+++....            
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~   88 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM   88 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEE
Confidence            5688887 9999999999999864  46788999999753  34456788999999999999874321            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                   
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~-------------------  149 (287)
T 1u59_A           89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA-------------------  149 (287)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEE-------------------
T ss_pred             EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCE-------------------
Confidence                           2347899999999999999999999999999999999999877655                   


Q ss_pred             CCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                              +|+|||++......      .....||+.|+|||++.+..++.++|||||||++|+|++ |..||......+
T Consensus       150 --------kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  221 (287)
T 1u59_A          150 --------KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE  221 (287)
T ss_dssp             --------EECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH
T ss_pred             --------EECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence                    55555554433211      112356889999999998889999999999999999998 999998877655


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+....                       ..                          .....+++.+.+||.+||+.
T Consensus       222 ~~~~i~~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~~l~~  252 (287)
T 1u59_A          222 VMAFIEQGK-----------------------RM--------------------------ECPPECPPELYALMSDCWIY  252 (287)
T ss_dssp             HHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHhcCC-----------------------cC--------------------------CCCCCcCHHHHHHHHHHcCC
Confidence            544332210                       00                          11134567899999999999


Q ss_pred             CCCCCCCHHHHHcC
Q 015532          373 DPAERLKAREALRH  386 (405)
Q Consensus       373 dP~~Rpta~elL~h  386 (405)
                      ||++|||+.++++|
T Consensus       253 ~p~~Rps~~~l~~~  266 (287)
T 1u59_A          253 KWEDRPDFLTVEQR  266 (287)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999976

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.1e-38  Score=298.03  Aligned_cols=221  Identities=24%  Similarity=0.353  Sum_probs=171.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEe-----cCCCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~-----~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~--------  154 (405)
                      .++|++.+.||+|+||.||+|++     ..+++.||||+++...  ...+.+.+|+.+++++ .|+++....        
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            36899999999999999999985     4567899999997543  3456788999999999 888874311        


Q ss_pred             --------------------c-----------------ccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          155 --------------------Y-----------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       155 --------------------~-----------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                                          .                 ..+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  181 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG  181 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC
Confidence                                0                 137899999999999999999999999999999999999877


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                      +.+|++|||++                           .......     ....||+.|+|||++.+..++.++||||||
T Consensus       182 ~~~kl~Dfg~~---------------------------~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  234 (313)
T 1t46_A          182 RITKICDFGLA---------------------------RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG  234 (313)
T ss_dssp             TEEEECCCGGG---------------------------SCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             CCEEEcccccc---------------------------ccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHH
Confidence            76655555544                           3222111     123578899999999998999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|+|++ |..||.+.........+......                                                
T Consensus       235 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~------------------------------------------------  266 (313)
T 1t46_A          235 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR------------------------------------------------  266 (313)
T ss_dssp             HHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC------------------------------------------------
T ss_pred             HHHHHHHhCCCCCCCcccchhHHHHHhccCCC------------------------------------------------
Confidence            99999999 99999876544333322211000                                                


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .......+..+.+||.+||+.||++|||+.|++++
T Consensus       267 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          267 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            00112346789999999999999999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.4e-38  Score=300.60  Aligned_cols=223  Identities=22%  Similarity=0.329  Sum_probs=175.3

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      +...++|++.+.||+|+||.||+|++.     .+++.||||++....  .....+.+|+.+++.+.|+++....      
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            345578999999999999999999886     357889999996533  3345678999999999999874321      


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++     
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~-----  175 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-----  175 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC-----
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC-----
Confidence                                           02347788999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                                            .+||+|||++.......     ....||+.|+|||++.+..++.++|||||||++|+|
T Consensus       176 ----------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  233 (322)
T 1p4o_A          176 ----------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI  233 (322)
T ss_dssp             ----------------------CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ----------------------eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHH
Confidence                                  46666666665432221     223678899999999998999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC
Q 015532          279 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  357 (405)
Q Consensus       279 lt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (405)
                      ++ |..||.+.+..+....+...  ..                     .                          .....
T Consensus       234 ~~~g~~p~~~~~~~~~~~~~~~~--~~---------------------~--------------------------~~~~~  264 (322)
T 1p4o_A          234 ATLAEQPYQGLSNEQVLRFVMEG--GL---------------------L--------------------------DKPDN  264 (322)
T ss_dssp             HHTSCCTTTTSCHHHHHHHHHTT--CC---------------------C--------------------------CCCTT
T ss_pred             HhcCCCccccCCHHHHHHHHHcC--Cc---------------------C--------------------------CCCCC
Confidence            99 89999887765554433221  00                     0                          01124


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          358 SAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       358 ~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ++..+.+||.+||+.||++|||+.|+++|
T Consensus       265 ~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          265 CPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            56789999999999999999999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2e-38  Score=298.49  Aligned_cols=221  Identities=22%  Similarity=0.321  Sum_probs=168.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEe-----cCCCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~-----~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~--------  154 (405)
                      .++|++.+.||+|+||+||+|++     ..+++.||||+++...  ...+.+.+|+.++..+ .|+++....        
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            46899999999999999999985     3567899999997532  2345678999999999 566663211        


Q ss_pred             --------------------cc----------------cCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 --------------------YR----------------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 --------------------~~----------------~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                          ..                .+++..+..++.||+.||.|||++||+||||||+||+++.++
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~  185 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN  185 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC
Confidence                                00                178889999999999999999999999999999999998776


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHH
Q 015532          199 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  273 (405)
Q Consensus       199 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  273 (405)
                      .+|++|||                           ++......     .....||+.|+|||++.+..++.++|||||||
T Consensus       186 ~~kl~Dfg---------------------------~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~  238 (316)
T 2xir_A          186 VVKICDFG---------------------------LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV  238 (316)
T ss_dssp             CEEECCCG---------------------------GGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             CEEECCCc---------------------------cccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHH
Confidence            55555554                           44332211     12246788999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhh
Q 015532          274 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  352 (405)
Q Consensus       274 il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (405)
                      ++|+|++ |..||.+....+.+........                      ..                          
T Consensus       239 il~~l~t~g~~p~~~~~~~~~~~~~~~~~~----------------------~~--------------------------  270 (316)
T 2xir_A          239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGT----------------------RM--------------------------  270 (316)
T ss_dssp             HHHHHHTTSCCSSTTCCCSHHHHHHHHHTC----------------------CC--------------------------
T ss_pred             HHHHHHhCCCCCCcccchhHHHHHHhccCc----------------------cC--------------------------
Confidence            9999998 9999987654333222111100                      00                          


Q ss_pred             hcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       353 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ......++.+.++|.+||+.||++|||+.|+++|
T Consensus       271 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          271 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            0112346789999999999999999999999975

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.6e-38  Score=314.40  Aligned_cols=225  Identities=25%  Similarity=0.345  Sum_probs=176.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+.+|+++.|+++....                
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~  261 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS  261 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred             hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhc
Confidence            4679999999999999999999865 45699999986655667899999999999999884321                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                       
T Consensus       262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~-----------------------  318 (452)
T 1fmk_A          262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----------------------  318 (452)
T ss_dssp             TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC-----------------------
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCC-----------------------
Confidence                        123788899999999999999999999999999999999976654                       


Q ss_pred             CCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                          +||+|||++.......    ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+..+
T Consensus       319 ----~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i  394 (452)
T 1fmk_A          319 ----CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV  394 (452)
T ss_dssp             ----EEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             ----EEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence                5666666665432211    12356788999999998899999999999999999999 99999988776665544


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+..                       +..                          .+..+++.+.+||.+||+.||++|
T Consensus       395 ~~~~-----------------------~~~--------------------------~~~~~~~~l~~li~~cl~~dP~~R  425 (452)
T 1fmk_A          395 ERGY-----------------------RMP--------------------------CPPECPESLHDLMCQCWRKEPEER  425 (452)
T ss_dssp             HTTC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HcCC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHccCChhhC
Confidence            3211                       000                          112456789999999999999999


Q ss_pred             CCHHHHHc--CCCCCCC
Q 015532          378 LKAREALR--HPFFTRD  392 (405)
Q Consensus       378 pta~elL~--hp~f~~~  392 (405)
                      ||++++++  ..++...
T Consensus       426 pt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          426 PTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CCHHHHHHHHHTTTSCS
T ss_pred             cCHHHHHHHHHHHhccC
Confidence            99999987  4666553

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=5.1e-39  Score=303.74  Aligned_cols=242  Identities=21%  Similarity=0.192  Sum_probs=174.3

Q ss_pred             EeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------
Q 015532           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------  154 (405)
Q Consensus        84 ~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------  154 (405)
                      +...+...++|++.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.+++.+.|+++....        
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE  109 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence            3334556789999999999999999999974 68899999986432 3456788999999999999873211        


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..+..++.||+.||.|||++||+||||||+|||++.++.            
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~------------  177 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFV------------  177 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCC------------
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCC------------
Confidence                                   124788999999999999999999999999999999999976554            


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  286 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~  286 (405)
                                     +||+|||++.....     ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus       178 ---------------~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~  242 (321)
T 2qkw_B          178 ---------------PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV  242 (321)
T ss_dssp             ---------------EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCS
T ss_pred             ---------------EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccc
Confidence                           55666665543221     1123468999999999998899999999999999999999999997


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHH
Q 015532          287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  366 (405)
Q Consensus       287 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  366 (405)
                      +....+....+...                ......+......+                 +..........+..+.+|+
T Consensus       243 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~li  289 (321)
T 2qkw_B          243 QSLPREMVNLAEWA----------------VESHNNGQLEQIVD-----------------PNLADKIRPESLRKFGDTA  289 (321)
T ss_dssp             CSSSSSCCCHHHHT----------------HHHHTTTCCCSSSS-----------------SSCTTCSCHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHh----------------hhccccccHHHhcC-----------------hhhccccCHHHHHHHHHHH
Confidence            64432111100000                00000000000000                 0000111123466899999


Q ss_pred             HHccccCCCCCCCHHHHHcC
Q 015532          367 QGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       367 ~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+||+.||++|||+.|+++|
T Consensus       290 ~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          290 VKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCcccCcCHHHHHHH
Confidence            99999999999999999975

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-38  Score=299.04  Aligned_cols=221  Identities=21%  Similarity=0.288  Sum_probs=164.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+.+|+.+++.+.|+++....            
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            367999999999999999999999999999999996532    2346678899999999999885421            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++                     
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~---------------------  171 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD---------------------  171 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS---------------------
T ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC---------------------
Confidence                           13578899999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                            .++|+|||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+........
T Consensus       172 ------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  245 (309)
T 2h34_A          172 ------FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGA  245 (309)
T ss_dssp             ------CEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHH
T ss_pred             ------CEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHH
Confidence                  4566666665443322    123478999999999998889999999999999999999999998765432221


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+..   ..+                                            ........++..+.+||.+||+.||+
T Consensus       246 ~~~~---~~~--------------------------------------------~~~~~~~~~~~~l~~li~~~l~~dP~  278 (309)
T 2h34_A          246 HINQ---AIP--------------------------------------------RPSTVRPGIPVAFDAVIARGMAKNPE  278 (309)
T ss_dssp             HHHS---CCC--------------------------------------------CGGGTSTTCCTHHHHHHHHHTCSSGG
T ss_pred             Hhcc---CCC--------------------------------------------CccccCCCCCHHHHHHHHHhccCCHH
Confidence            1111   000                                            00111234567899999999999999


Q ss_pred             CCC-CHHHHHc
Q 015532          376 ERL-KAREALR  385 (405)
Q Consensus       376 ~Rp-ta~elL~  385 (405)
                      +|| |++++++
T Consensus       279 ~Rp~s~~~l~~  289 (309)
T 2h34_A          279 DRYVTCGDLSA  289 (309)
T ss_dssp             GSCSSHHHHHH
T ss_pred             HHHHhHHHHHH
Confidence            999 8888875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=3.6e-38  Score=293.72  Aligned_cols=218  Identities=24%  Similarity=0.349  Sum_probs=169.8

Q ss_pred             CCeEEEe-eeecccceeEEEEEe--cCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILS-KMGEGTFGQVVECFD--NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~-~LG~G~fg~V~~a~~--~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ++|++.+ .||+|+||+||+|.+  ..+++.||||+++...   ...+.+.+|+++++.+.|+++....           
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv   95 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV   95 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEE
Confidence            5799998 999999999999954  5677899999996532   2356788999999999999884321           


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+                   
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~-------------------  156 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-------------------  156 (291)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE-------------------
T ss_pred             EEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcE-------------------
Confidence                           1347899999999999999999999999999999999999876654                   


Q ss_pred             CCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                              +|+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       157 --------kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  228 (291)
T 1xbb_A          157 --------KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  228 (291)
T ss_dssp             --------EECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             --------EEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                    555555554332211      11346788999999998889999999999999999999 999999877655


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+....                       ..                          .....+++.+.+||.+||+.
T Consensus       229 ~~~~~~~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~~l~~  259 (291)
T 1xbb_A          229 VTAMLEKGE-----------------------RM--------------------------GCPAGCPREMYDLMNLCWTY  259 (291)
T ss_dssp             HHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCC-----------------------CC--------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            444332210                       00                          01124567899999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      ||++|||+.++++
T Consensus       260 dp~~Rps~~~l~~  272 (291)
T 1xbb_A          260 DVENRPGFAAVEL  272 (291)
T ss_dssp             STTTSCCHHHHHH
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999985

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.7e-38  Score=297.55  Aligned_cols=220  Identities=17%  Similarity=0.242  Sum_probs=166.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC---CCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~---~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .++|.+.+.||+|+||.||+|.+..   +++.||||+++..   ....+.+.+|+.+++.+.|+++....          
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            3689999999999999999998765   5568999998643   23346688999999999999874321          


Q ss_pred             ----------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcc
Q 015532          155 ----------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       155 ----------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                                                  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.       
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~-------  185 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT-------  185 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC-------
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc-------
Confidence                                        134788999999999999999999999999999999999976554       


Q ss_pred             ccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-
Q 015532          207 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-  280 (405)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-  280 (405)
                                          +||+|||++......     .....+++.|+|||++.+..++.++|||||||++|+|++ 
T Consensus       186 --------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~  245 (313)
T 3brb_A          186 --------------------VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR  245 (313)
T ss_dssp             --------------------EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred             --------------------EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhc
Confidence                                566666655433221     122457889999999999999999999999999999999 


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+....+....+....                       ..                          .....+++
T Consensus       246 g~~p~~~~~~~~~~~~~~~~~-----------------------~~--------------------------~~~~~~~~  276 (313)
T 3brb_A          246 GMTPYPGVQNHEMYDYLLHGH-----------------------RL--------------------------KQPEDCLD  276 (313)
T ss_dssp             SCCSSTTCCGGGHHHHHHTTC-----------------------CC--------------------------CCBTTCCH
T ss_pred             CCCCCccCCHHHHHHHHHcCC-----------------------CC--------------------------CCCccccH
Confidence            999998876654443322110                       00                          11234567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+.+||.+||..||++|||+.+++++
T Consensus       277 ~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          277 ELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            89999999999999999999999864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.4e-38  Score=294.41  Aligned_cols=215  Identities=20%  Similarity=0.299  Sum_probs=165.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.+.||+|+||.||+|.+.  ++.||||+++... ..+.+.+|+.+++.+.|+++....                 
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             hhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            67999999999999999999874  7899999997543 456788999999999999874321                 


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||.|||++||+||||||+||+++.++                       
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------------------  154 (278)
T 1byg_A           98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------------------  154 (278)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-----------------------
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCC-----------------------
Confidence                         01267888999999999999999999999999999999997654                       


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                          .++|+|||++...........+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....+...
T Consensus       155 ----~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~  230 (278)
T 1byg_A          155 ----VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG  230 (278)
T ss_dssp             ----CEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT
T ss_pred             ----cEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence                4677777776655444444567889999999999899999999999999999998 99999876554433322110


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      .                       .                          ......+++.+.+||.+||+.||++|||+
T Consensus       231 ~-----------------------~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~  261 (278)
T 1byg_A          231 Y-----------------------K--------------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSF  261 (278)
T ss_dssp             C-----------------------C--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             C-----------------------C--------------------------CCCcccCCHHHHHHHHHHhcCChhhCCCH
Confidence            0                       0                          01123456789999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      .|+++
T Consensus       262 ~~l~~  266 (278)
T 1byg_A          262 LQLRE  266 (278)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=7.9e-39  Score=308.78  Aligned_cols=218  Identities=22%  Similarity=0.284  Sum_probs=164.2

Q ss_pred             CCeEEEeeeecccceeEEEEEec---CCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||.||+|++.   .++..||||+++..  ....+.+.+|+.+++++.|+++....            
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            57999999999999999999986   46778999999643  33456788999999999999884321            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                   
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-------------------  185 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV-------------------  185 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-------------------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCC-------------------
Confidence                            125788999999999999999999999999999999999976654                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  291 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~  291 (405)
                              +||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus       186 --------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~  257 (373)
T 2qol_A          186 --------CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ  257 (373)
T ss_dssp             --------EEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH
T ss_pred             --------EEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                    5556666554432211      11235778999999999999999999999999999998 99999887766


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+.....                       .                          .....++..+.+||.+||+
T Consensus       258 ~~~~~i~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~cl~  288 (373)
T 2qol_A          258 DVIKAVDEGYR-----------------------L--------------------------PPPMDCPAALYQLMLDCWQ  288 (373)
T ss_dssp             HHHHHHHTTEE-----------------------C--------------------------CCCTTCBHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCC-----------------------C--------------------------CCCccccHHHHHHHHHHhC
Confidence            55544322110                       0                          0112346789999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .||++|||+.|+++
T Consensus       289 ~dp~~RPs~~~i~~  302 (373)
T 2qol_A          289 KDRNNRPKFEQIVS  302 (373)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             cChhhCcCHHHHHH
Confidence            99999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=6.6e-38  Score=297.48  Aligned_cols=225  Identities=20%  Similarity=0.288  Sum_probs=170.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCc-----EEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc--------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKE-----LVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR--------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~-----~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~--------  154 (405)
                      .++|++.+.||+|+||.||+|.+..+++     .||||+++...  ...+.+.+|+.+++.+ .|+++....        
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  124 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP  124 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence            4789999999999999999999976654     79999996532  3456788999999999 888874321        


Q ss_pred             ---------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          155 ---------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       155 ---------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus       125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~k  204 (333)
T 2i1m_A          125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK  204 (333)
T ss_dssp             CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEE
T ss_pred             eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEE
Confidence                                             11357888999999999999999999999999999999998877666


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-  280 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-  280 (405)
                      |+|||++........                      ........||+.|+|||++.+..++.++|||||||++|+|++ 
T Consensus       205 l~Dfg~~~~~~~~~~----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~  262 (333)
T 2i1m_A          205 IGDFGLARDIMNDSN----------------------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL  262 (333)
T ss_dssp             BCCCGGGCCGGGCTT----------------------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred             ECccccccccccccc----------------------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcC
Confidence            666655422111000                      000112457889999999999899999999999999999998 


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+.........+......                      .                          ......+.
T Consensus       263 g~~p~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~  294 (333)
T 2i1m_A          263 GLNPYPGILVNSKFYKLVKDGYQ----------------------M--------------------------AQPAFAPK  294 (333)
T ss_dssp             SCCSSTTCCSSHHHHHHHHHTCC----------------------C--------------------------CCCTTCCH
T ss_pred             CCCCCcccchhHHHHHHHhcCCC----------------------C--------------------------CCCCCCCH
Confidence            99999876544433322221100                      0                          01123466


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHc
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .+.+||.+||+.||++|||+.|+++
T Consensus       295 ~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          295 NIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHH
Confidence            8999999999999999999999987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=5.4e-38  Score=298.42  Aligned_cols=220  Identities=18%  Similarity=0.294  Sum_probs=170.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEec-------CCCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~-------~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~------  154 (405)
                      .++|++.+.||+|+||.||+|++.       .+++.||||+++...  ...+.+.+|+.+++.+ .|+++....      
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            468999999999999999999975       356789999996532  3446688999999999 888873311      


Q ss_pred             -------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecc
Q 015532          155 -------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       155 -------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~  197 (405)
                                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  193 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  193 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC
Confidence                                                 0137888999999999999999999999999999999999766


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHH
Q 015532          198 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  272 (405)
Q Consensus       198 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  272 (405)
                      +.                           +||+|||++......     .....+|+.|+|||++.+..++.++||||||
T Consensus       194 ~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  246 (334)
T 2pvf_A          194 NV---------------------------MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  246 (334)
T ss_dssp             CC---------------------------EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             CC---------------------------EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHH
Confidence            54                           556666655433221     1223567889999999988899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|+|++ |..||.+....+....+.....                       .                         
T Consensus       247 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-----------------------~-------------------------  278 (334)
T 2pvf_A          247 VLMWEIFTLGGSPYPGIPVEELFKLLKEGHR-----------------------M-------------------------  278 (334)
T ss_dssp             HHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC-----------------------C-------------------------
T ss_pred             HHHHHHHhCCCCCcCcCCHHHHHHHHhcCCC-----------------------C-------------------------
Confidence            99999999 9999988776655443332110                       0                         


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                       .....++..+.+||.+||+.||++|||+.|++++
T Consensus       279 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          279 -DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             0112346789999999999999999999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3e-38  Score=302.38  Aligned_cols=233  Identities=16%  Similarity=0.171  Sum_probs=168.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC--------CcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCC----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK--------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG----------  152 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~--------~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~----------  152 (405)
                      .++|++.+.||+|+||.||+|++..+        ++.||||++...    +.+.+|+++++++.|+++..          
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            47899999999999999999999874        789999998754    34778999999998866421          


Q ss_pred             --------------Cc--------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          153 --------------TR--------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       153 --------------~~--------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                    ..                    ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             cCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence                          00                    14588999999999999999999999999999999999998776


Q ss_pred             --ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHH
Q 015532          199 --YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  276 (405)
Q Consensus       199 --~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  276 (405)
                        .+||+|||++.........                 ............||+.|+|||++.+..++.++|||||||++|
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  259 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKH-----------------VAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML  259 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCC-----------------CCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             CceEEEecCcceeeccCCCcc-----------------ccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence              6666666654332211000                 000001112347999999999999989999999999999999


Q ss_pred             HHHhCCCCCCCCC-hHHHHH-HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhc
Q 015532          277 ELCSGEALFQTHE-NLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  354 (405)
Q Consensus       277 ~lltg~~pf~~~~-~~~~~~-~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (405)
                      +|++|..||.... ....+. .........+.                     +.                    .....
T Consensus       260 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------~~--------------------~~~~~  298 (352)
T 2jii_A          260 KWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGP---------------------FV--------------------GPCGH  298 (352)
T ss_dssp             HHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCC---------------------EE--------------------CTTSC
T ss_pred             HHHhCCCCcccCCcCHHHHHHHHHhccCChhh---------------------hh--------------------hhccc
Confidence            9999999998753 222222 22111111000                     00                    00001


Q ss_pred             ccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          355 VDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       355 ~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      ...++..+.+||.+||+.||++|||++++++
T Consensus       299 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          299 WIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             EECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            1245678999999999999999999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.5e-38  Score=292.13  Aligned_cols=217  Identities=21%  Similarity=0.271  Sum_probs=165.9

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCc---EEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~---~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +|.+.++||+|+||+||+|++..+++   .||+|++....  ...+.+.+|+.+++.+.|+++....             
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            57788999999999999999765544   79999986533  3446788999999999999874321             


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                   
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~-------------------  162 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFT-------------------  162 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC-------------------
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc-------------------
Confidence                            134678899999999999999999999999999999999976654                   


Q ss_pred             cCCCCCCCceeccCCCCccccC-------CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  290 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~  290 (405)
                              ++|+|||++.....       ......+|+.|+|||.+.+..++.++|||||||++|+|++ |.+||...+.
T Consensus       163 --------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~  234 (298)
T 3pls_A          163 --------VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP  234 (298)
T ss_dssp             --------EEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG
T ss_pred             --------EEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH
Confidence                    55555555543221       1122467889999999999999999999999999999999 5555655554


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+....+.....                       .                          ......++.+.+||.+||
T Consensus       235 ~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~~l  265 (298)
T 3pls_A          235 FDLTHFLAQGRR-----------------------L--------------------------PQPEYCPDSLYQVMQQCW  265 (298)
T ss_dssp             GGHHHHHHTTCC-----------------------C--------------------------CCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHhhcCCC-----------------------C--------------------------CCCccchHHHHHHHHHHc
Confidence            443333222110                       0                          011234678999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 015532          371 RYDPAERLKAREALR  385 (405)
Q Consensus       371 ~~dP~~Rpta~elL~  385 (405)
                      +.||++|||+.++++
T Consensus       266 ~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          266 EADPAVRPTFRVLVG  280 (298)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999999885

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9e-38  Score=296.87  Aligned_cols=220  Identities=22%  Similarity=0.293  Sum_probs=168.3

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCC----cEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~----~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..+|++.+.||+|+||.||+|.+..++    ..||||+++..  ......+.+|+.+++.+.|+++....          
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            468999999999999999999987553    45999999653  23455688999999999999984321          


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                 
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~-----------------  185 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV-----------------  185 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-----------------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCc-----------------
Confidence                              135788999999999999999999999999999999999976554                 


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  289 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~  289 (405)
                                +||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus       186 ----------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~  255 (333)
T 1mqb_A          186 ----------CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS  255 (333)
T ss_dssp             ----------EEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             ----------EEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC
Confidence                      5666666654432211      11245778999999999899999999999999999999 999998877


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+....+....                       +.                          .....++..+.+||.+|
T Consensus       256 ~~~~~~~~~~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~~  286 (333)
T 1mqb_A          256 NHEVMKAINDGF-----------------------RL--------------------------PTPMDCPSAIYQLMMQC  286 (333)
T ss_dssp             HHHHHHHHHTTC-----------------------CC--------------------------CCCTTCBHHHHHHHHHH
T ss_pred             HHHHHHHHHCCC-----------------------cC--------------------------CCcccCCHHHHHHHHHH
Confidence            665544432210                       00                          01123467899999999


Q ss_pred             cccCCCCCCCHHHHHcC
Q 015532          370 LRYDPAERLKAREALRH  386 (405)
Q Consensus       370 L~~dP~~Rpta~elL~h  386 (405)
                      |+.||++|||+.+++++
T Consensus       287 l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          287 WQQERARRPKFADIVSI  303 (333)
T ss_dssp             TCSSTTTSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999863

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=7e-40  Score=333.13  Aligned_cols=251  Identities=24%  Similarity=0.338  Sum_probs=178.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++.++||+|+||.||+|.+..+++.||||+++..  ....+.+.+|+.+++.+.|+++....              
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            47899999999999999999999999999999998643  34456788999999999999874210              


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...+++..++.++.||+.||.|||++||+||||||+|||++.++              
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g--------------  158 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP--------------  158 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS--------------
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC--------------
Confidence                                  01477889999999999999999999999999999999998654              


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                ....++|+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       159 ----------~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~  228 (676)
T 3qa8_A          159 ----------QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ  228 (676)
T ss_dssp             ----------SSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred             ----------CceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence                      23347888888887654332  335799999999999988999999999999999999999999987543


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .....      ........    .....+........+..                ...........+++.+.+||.+||
T Consensus       229 ~~~~~------~~i~~~~~----~~~~~~~~l~g~~~~~~----------------~lp~p~~l~~~ls~~L~dLI~~mL  282 (676)
T 3qa8_A          229 PVQWH------GKVREKSN----EHIVVYDDLTGAVKFSS----------------VLPTPNHLSGILAGKLERWLQCML  282 (676)
T ss_dssp             HHHSS------TTCC----------CCSCCCCSSSCCCCS----------------SSCCSCCCCGGGHHHHHHHHHHHS
T ss_pred             hhhhh------hhhhcccc----hhhhhhhhhcccccccc----------------ccCCchhhchhhhHHHHHHHHHHc
Confidence            32110      00000000    00000000000011110                000011122346788999999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFTR  391 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~~  391 (405)
                      .+||++|||+.|+++||||+.
T Consensus       283 ~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          283 MWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CSSCC---CCTTCCCCTTHHH
T ss_pred             cCCHhhCcCHHHHhcCHHHHH
Confidence            999999999999999999964

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=6.3e-38  Score=293.36  Aligned_cols=234  Identities=21%  Similarity=0.365  Sum_probs=170.8

Q ss_pred             CCCeEEEeeeecccceeEEEEE----ecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           91 TPRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~----~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..+|++.+.||+|+||.||+|+    +..+++.||||+++...  ...+.+.+|+.+++.+.|+++....          
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            4679999999999999999999    56789999999996432  2346788999999999999874321          


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++.               
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~---------------  164 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ---------------  164 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE---------------
T ss_pred             EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCC---------------
Confidence                                134788899999999999999999999999999999999987665               


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                                  ++|+|||++.......      ....||..|+|||++.+..++.++|||||||++|+|++|..|+...
T Consensus       165 ------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  232 (302)
T 4e5w_A          165 ------------VKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSP  232 (302)
T ss_dssp             ------------EEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             ------------EEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcch
Confidence                        4555555554332221      1235788899999999988999999999999999999999987432


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                           ...+....++........   ........+..                          ......+++.+.+||.+
T Consensus       233 -----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~  278 (302)
T 4e5w_A          233 -----MALFLKMIGPTHGQMTVT---RLVNTLKEGKR--------------------------LPCPPNCPDEVYQLMRK  278 (302)
T ss_dssp             -----HHHHHHHHCSCCGGGHHH---HHHHHHHTTCC--------------------------CCCCTTCCHHHHHHHHH
T ss_pred             -----hhHHhhccCCcccccCHH---HHHHHHhccCC--------------------------CCCCCCCCHHHHHHHHH
Confidence                 111222222222111100   00000011101                          11223567799999999


Q ss_pred             ccccCCCCCCCHHHHHc
Q 015532          369 LLRYDPAERLKAREALR  385 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~  385 (405)
                      ||+.||++|||+.|+++
T Consensus       279 ~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          279 CWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             TTCSSGGGSCCHHHHHH
T ss_pred             HcCCCCCCCCCHHHHHH
Confidence            99999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=6.5e-39  Score=297.11  Aligned_cols=222  Identities=28%  Similarity=0.345  Sum_probs=174.2

Q ss_pred             CCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        87 ~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      +..+.++|++.+.||+|+||.||+|++..+++.||||+++...   +.+.+|+++++.+.|+++....            
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET   82 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence            4456678999999999999999999999999999999997543   3466899999999999875310            


Q ss_pred             ---------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          155 ---------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       155 ---------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                                                       ...+++..++.++.||+.||.|||++||+||||||+|||++.++.  
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--  160 (284)
T 2a19_B           83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ--  160 (284)
T ss_dssp             ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--
T ss_pred             ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCC--
Confidence                                             124678899999999999999999999999999999999987664  


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHH
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  279 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~ll  279 (405)
                                               ++|+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       161 -------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  215 (284)
T 2a19_B          161 -------------------------VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL  215 (284)
T ss_dssp             -------------------------EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH
T ss_pred             -------------------------EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH
Confidence                                     455556655433221  22346899999999999989999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCch
Q 015532          280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  359 (405)
Q Consensus       280 tg~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (405)
                      +|..||....  .....+..  +                                                  .....++
T Consensus       216 ~~~~~~~~~~--~~~~~~~~--~--------------------------------------------------~~~~~~~  241 (284)
T 2a19_B          216 HVCDTAFETS--KFFTDLRD--G--------------------------------------------------IISDIFD  241 (284)
T ss_dssp             SCCSSHHHHH--HHHHHHHT--T--------------------------------------------------CCCTTSC
T ss_pred             hcCCcchhHH--HHHHHhhc--c--------------------------------------------------cccccCC
Confidence            9998874210  10000000  0                                                  0112346


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ..+.+||.+||+.||++|||+.|+++|.|.-..
T Consensus       242 ~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          242 KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            688999999999999999999999999876543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=3.9e-38  Score=317.74  Aligned_cols=224  Identities=25%  Similarity=0.348  Sum_probs=178.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+++|+.+.|++++...                 
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~  345 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK  345 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             hhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcC
Confidence            469999999999999999999865 45699999987655667899999999999999985321                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||++||+||||||+|||++.++                         
T Consensus       346 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-------------------------  400 (535)
T 2h8h_A          346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-------------------------  400 (535)
T ss_dssp             EEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-------------------------
T ss_pred             CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC-------------------------
Confidence                       12378889999999999999999999999999999999997655                         


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                        .+||+|||++.......    ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+..+.
T Consensus       401 --~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~  478 (535)
T 2h8h_A          401 --VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  478 (535)
T ss_dssp             --CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH
T ss_pred             --cEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence              45666666665433211    12346778999999998899999999999999999999 999999887766655443


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +..                       +..                          ....++..+.+||.+||+.||++||
T Consensus       479 ~~~-----------------------~~~--------------------------~~~~~~~~l~~li~~cl~~dP~~RP  509 (535)
T 2h8h_A          479 RGY-----------------------RMP--------------------------CPPECPESLHDLMCQCWRKEPEERP  509 (535)
T ss_dssp             TTC-----------------------CCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHcCCChhHCc
Confidence            211                       000                          1124567899999999999999999


Q ss_pred             CHHHHHcC--CCCCCC
Q 015532          379 KAREALRH--PFFTRD  392 (405)
Q Consensus       379 ta~elL~h--p~f~~~  392 (405)
                      |+++|++.  .+|...
T Consensus       510 t~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          510 TFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CHHHHHHHHHTSSCCC
T ss_pred             CHHHHHHHHHHHhhcc
Confidence            99999873  666543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=302.90  Aligned_cols=253  Identities=19%  Similarity=0.219  Sum_probs=162.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      .++|++.+.||+|+||.||+|++  +++.||||+++...........|+..+..+.|+++....                
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            36799999999999999999976  588999999975443333333344445568888874421                


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHC---------CcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHEL---------RLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~---------givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                     ...+++..+..++.||+.||.|||++         ||+||||||+|||++.++.+          
T Consensus        90 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~----------  159 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC----------  159 (336)
T ss_dssp             EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE----------
T ss_pred             EEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE----------
Confidence                           12346778899999999999999999         99999999999999876655          


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccC-----------CccceecCCCcchhHHHhC-------CCCCCchhHHHHH
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----------DHSYVVSTRHYRAPEVILG-------LGWNYPCDLWSVG  272 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----------~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG  272 (405)
                                       ||+|||++.....           ......||+.|+|||++.+       ..++.++||||||
T Consensus       160 -----------------kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  222 (336)
T 3g2f_A          160 -----------------VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG  222 (336)
T ss_dssp             -----------------EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHH
T ss_pred             -----------------EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHH
Confidence                             5555555433221           1123469999999999987       3466789999999


Q ss_pred             HHHHHHHhCCCCCCC-CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhh
Q 015532          273 CILVELCSGEALFQT-HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  351 (405)
Q Consensus       273 ~il~~lltg~~pf~~-~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (405)
                      |++|+|++|..||.. ....+....+....+..|......     ........+..++...                   
T Consensus       223 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------------  278 (336)
T 3g2f_A          223 LIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQ-----VLVSREKQRPKFPEAW-------------------  278 (336)
T ss_dssp             HHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHH-----HHHTTSCCCCCCCTTC-------------------
T ss_pred             HHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHH-----hhhcccccCCCCCccc-------------------
Confidence            999999999766533 221111111111122222110000     0000011111111100                   


Q ss_pred             hhcccCchHHHHHHHHHccccCCCCCCCHHHH------HcCCCCCCCCCCCc
Q 015532          352 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREA------LRHPFFTRDVRRPT  397 (405)
Q Consensus       352 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el------L~hp~f~~~~~~~~  397 (405)
                       ......++.+.+||.+||+.||++|||+.|+      +-++|-+++...++
T Consensus       279 -~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~~~~~  329 (336)
T 3g2f_A          279 -KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPT  329 (336)
T ss_dssp             -CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-------
T ss_pred             -ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcccCCCc
Confidence             0011245679999999999999999999999      45899988766543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.6e-38  Score=301.22  Aligned_cols=243  Identities=19%  Similarity=0.219  Sum_probs=172.1

Q ss_pred             CccC-CCeEEEeeeecccceeEEEEE----ecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           88 ENLT-PRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        88 ~~~~-~~y~~~~~LG~G~fg~V~~a~----~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      +.+. ++|++.+.||+|+||.||+|+    +..+++.||||++.... ...+.+.+|+++++.+.|+++....       
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   97 (327)
T 3lxl_A           18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG   97 (327)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence            3444 689999999999999999999    56789999999996543 3446688999999999998874321       


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||++...
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A           98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence                                   134788999999999999999999999999999999999988776655555543221


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                      .....                     .........||..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       178 ~~~~~---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~  236 (327)
T 3lxl_A          178 PLDKD---------------------YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE  236 (327)
T ss_dssp             CTTCS---------------------EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH
T ss_pred             ccCCc---------------------cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch
Confidence            11000                     000111235788899999999988999999999999999999999999753321


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      ....  .......+..      .........+.                          .......+++.+.+||.+||+
T Consensus       237 ~~~~--~~~~~~~~~~------~~~~~~~~~~~--------------------------~~~~~~~~~~~l~~li~~~l~  282 (327)
T 3lxl_A          237 FLRM--MGCERDVPAL------SRLLELLEEGQ--------------------------RLPAPPACPAEVHELMKLCWA  282 (327)
T ss_dssp             HHHH--CC----CCHH------HHHHHHHHTTC--------------------------CCCCCTTCCHHHHHHHHHHTC
T ss_pred             hhhh--cccccccccH------HHHHHHhhccc--------------------------CCCCCCcccHHHHHHHHHHcC
Confidence            1110  0000000000      00000000000                          011224567889999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .||++|||+.|+++
T Consensus       283 ~dP~~Rps~~ell~  296 (327)
T 3lxl_A          283 PSPQDRPSFSALGP  296 (327)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999964

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=9.4e-38  Score=291.71  Aligned_cols=225  Identities=15%  Similarity=0.186  Sum_probs=166.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC---CcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      .+|++.+.||+|+||+||+|++..+   ...||+|+++...  ...+.+.+|+.+++++.|+++....            
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4699999999999999999997543   3468999986532  3446688999999999999874322            


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+|++|||++.......  
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~--  182 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--  182 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG--
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccc--
Confidence                             1346788999999999999999999999999999999999877655555555432211000  


Q ss_pred             ccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  296 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~  296 (405)
                                        ...........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+....
T Consensus       183 ------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~  244 (298)
T 3f66_A          183 ------------------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY  244 (298)
T ss_dssp             ------------------GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHH
T ss_pred             ------------------hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence                              000011122467889999999999999999999999999999999 6777876655444333


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+....                                                 ......++.+.+||.+||+.||++
T Consensus       245 ~~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~  275 (298)
T 3f66_A          245 LLQGRRL-------------------------------------------------LQPEYCPDPLYEVMLKCWHPKAEM  275 (298)
T ss_dssp             HHTTCCC-------------------------------------------------CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCCCC-------------------------------------------------CCCccCCHHHHHHHHHHcCCChhh
Confidence            3221100                                                 011234668999999999999999


Q ss_pred             CCCHHHHHc
Q 015532          377 RLKAREALR  385 (405)
Q Consensus       377 Rpta~elL~  385 (405)
                      |||+.|+++
T Consensus       276 Rps~~ell~  284 (298)
T 3f66_A          276 RPSFSELVS  284 (298)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.3e-38  Score=293.53  Aligned_cols=219  Identities=20%  Similarity=0.299  Sum_probs=163.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-CC--cEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-~~--~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++|++.+.||+|+||+||+|++.. ++  ..||||+++..    ....+.+.+|+++++.+.|+++....          
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   97 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence            579999999999999999998643 33  36999998643    23456788999999999999874321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+                 
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~-----------------  160 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV-----------------  160 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE-----------------
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCE-----------------
Confidence                             1347889999999999999999999999999999999999876654                 


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~  290 (405)
                                +|+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus       161 ----------kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~  230 (291)
T 1u46_A          161 ----------KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG  230 (291)
T ss_dssp             ----------EECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             ----------EEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH
Confidence                      555555554332211      12357788999999998889999999999999999999 9999988776


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+.+..+.......                                                .....++..+.++|.+||
T Consensus       231 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~l  262 (291)
T 1u46_A          231 SQILHKIDKEGERL------------------------------------------------PRPEDCPQDIYNVMVQCW  262 (291)
T ss_dssp             HHHHHHHHTSCCCC------------------------------------------------CCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHccCCCC------------------------------------------------CCCcCcCHHHHHHHHHHc
Confidence            65554432211000                                                011245678999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 015532          371 RYDPAERLKAREALR  385 (405)
Q Consensus       371 ~~dP~~Rpta~elL~  385 (405)
                      ..||++|||+.++++
T Consensus       263 ~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          263 AHKPEDRPTFVALRD  277 (291)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCCcccCcCHHHHHH
Confidence            999999999999997

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.3e-37  Score=316.69  Aligned_cols=219  Identities=25%  Similarity=0.328  Sum_probs=169.6

Q ss_pred             CCCeEEEe-eeecccceeEEEEEec--CCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           91 TPRYRILS-KMGEGTFGQVVECFDN--EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        91 ~~~y~~~~-~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      .++|.+.+ +||+|+||.||+|.+.  .++..||||+++..  ....+.+.+|+++|+.+.|++++...           
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv  413 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV  413 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEE
Confidence            35677766 8999999999999875  35677999999753  23467789999999999999984321           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+                  
T Consensus       414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~v------------------  475 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYA------------------  475 (613)
T ss_dssp             EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE------------------
T ss_pred             EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcE------------------
Confidence                            2347899999999999999999999999999999999999877654                  


Q ss_pred             cCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  291 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~  291 (405)
                               ||+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..
T Consensus       476 ---------kL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~  546 (613)
T 2ozo_A          476 ---------KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  546 (613)
T ss_dssp             ---------EECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH
T ss_pred             ---------EEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence                     555555554332111      11245688999999998899999999999999999998 99999988776


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+.+..                       +..                          .+..+++++.+||.+||+
T Consensus       547 ~~~~~i~~~~-----------------------~~~--------------------------~p~~~~~~l~~li~~cl~  577 (613)
T 2ozo_A          547 EVMAFIEQGK-----------------------RME--------------------------CPPECPPELYALMSDCWI  577 (613)
T ss_dssp             HHHHHHHTTC-----------------------CCC--------------------------CCTTCCHHHHHHHHHTTC
T ss_pred             HHHHHHHcCC-----------------------CCC--------------------------CCCcCCHHHHHHHHHHcC
Confidence            6555443211                       111                          123456789999999999


Q ss_pred             cCCCCCCCHHHHHc
Q 015532          372 YDPAERLKAREALR  385 (405)
Q Consensus       372 ~dP~~Rpta~elL~  385 (405)
                      .||++|||+.++++
T Consensus       578 ~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          578 YKWEDRPDFLTVEQ  591 (613)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999999853

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=3e-38  Score=299.21  Aligned_cols=219  Identities=21%  Similarity=0.273  Sum_probs=168.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEE--EEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELV--AIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~v--AiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||.||+|++..++..+  |||+++..  ....+.+.+|+.+++++ .|+++....            
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            67999999999999999999999888765  99988642  23345678899999999 788874311            


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..++.++.||+.||.|||++||+||||||+|||++.++.    
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~----  180 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV----  180 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC----
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCe----
Confidence                                           125789999999999999999999999999999999999977654    


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-  280 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-  280 (405)
                                             +||+|||++.....  ......+++.|+|||++.+..++.++|||||||++|+|++ 
T Consensus       181 -----------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  237 (327)
T 1fvr_A          181 -----------------------AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL  237 (327)
T ss_dssp             -----------------------EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             -----------------------EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcC
Confidence                                   55566665543221  1122357889999999998889999999999999999998 


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                      |..||.+....+....+....                       .                          ......+++
T Consensus       238 g~~pf~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~  268 (327)
T 1fvr_A          238 GGTPYCGMTCAELYEKLPQGY-----------------------R--------------------------LEKPLNCDD  268 (327)
T ss_dssp             SCCTTTTCCHHHHHHHGGGTC-----------------------C--------------------------CCCCTTBCH
T ss_pred             CCCCCCCCcHHHHHHHhhcCC-----------------------C--------------------------CCCCCCCCH
Confidence            999998877655443321100                       0                          011124567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .+.+||.+||+.||++|||++|++++
T Consensus       269 ~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          269 EVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            89999999999999999999999974

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-38  Score=299.92  Aligned_cols=231  Identities=20%  Similarity=0.278  Sum_probs=162.8

Q ss_pred             eEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH--hhcCCCCCc------
Q 015532           83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL--ARHDIGGTR------  154 (405)
Q Consensus        83 ~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l--~~~~~~~~~------  154 (405)
                      +...+..+.++|++.+.||+|+||.||+|++.  ++.||||++.....  .....|.+++..+  .|+++....      
T Consensus        28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             CcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc--chhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            34455667789999999999999999999985  88999999865433  3344555555544  788874321      


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHC--------CcEecCCCCCcEEEeccccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENILLVSAEYVKV  202 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~--------givHrDlkp~NIli~~~~~~k~  202 (405)
                                              ...+++..++.++.||+.||.|||++        ||+||||||+|||++.++.   
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~---  180 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT---  180 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC---
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC---
Confidence                                    13468889999999999999999998        9999999999999976654   


Q ss_pred             CCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-------cceecCCCcchhHHHhCCCCCCc------hhHH
Q 015532          203 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGLGWNYP------CDLW  269 (405)
Q Consensus       203 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~------~Diw  269 (405)
                                              +||+|||++.......       ....||+.|+|||++.+..++.+      +|||
T Consensus       181 ------------------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw  236 (337)
T 3mdy_A          181 ------------------------CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMY  236 (337)
T ss_dssp             ------------------------EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHH
T ss_pred             ------------------------EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchH
Confidence                                    5666666654332211       13479999999999988766655      9999


Q ss_pred             HHHHHHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCch
Q 015532          270 SVGCILVELCSG----------EALFQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR  335 (405)
Q Consensus       270 SlG~il~~lltg----------~~pf~~~~~----~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (405)
                      ||||++|+|++|          ..||.....    ..........                     ...+..++.     
T Consensus       237 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~-----  290 (337)
T 3mdy_A          237 SFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCI---------------------KKLRPSFPN-----  290 (337)
T ss_dssp             HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT---------------------SCCCCCCCG-----
T ss_pred             HHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhh---------------------hccCccccc-----
Confidence            999999999999          566643211    1111110000                     000000000     


Q ss_pred             hhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          336 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                                      ......+++++.+||.+||+.||++|||+.|+++|
T Consensus       291 ----------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          291 ----------------RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             ----------------GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ----------------cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                            00112346789999999999999999999999974

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.6e-37  Score=318.67  Aligned_cols=222  Identities=23%  Similarity=0.336  Sum_probs=167.7

Q ss_pred             eEEE-eeeecccceeEEEEEe--cCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           94 YRIL-SKMGEGTFGQVVECFD--NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        94 y~~~-~~LG~G~fg~V~~a~~--~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.+. ++||+|+||.||+|.+  ..+++.||||+++...   ...+.+.+|+++|+.+.|++++...             
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E  449 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME  449 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4443 4899999999999954  4567899999997533   2357789999999999999985422             


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........     
T Consensus       450 ~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~-----  524 (635)
T 4fl3_A          450 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-----  524 (635)
T ss_dssp             CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred             ccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc-----
Confidence                         23578899999999999999999999999999999999998877655555554432211000     


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                                      .........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+...
T Consensus       525 ----------------~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~  588 (635)
T 4fl3_A          525 ----------------YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG  588 (635)
T ss_dssp             --------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             ----------------ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence                            0001112356788999999999999999999999999999998 99999988877665544331


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      .                       ...                          ....+++++.+||.+||+.||++|||+
T Consensus       589 ~-----------------------~~~--------------------------~p~~~~~~l~~li~~cl~~dP~~RPs~  619 (635)
T 4fl3_A          589 E-----------------------RMG--------------------------CPAGCPREMYDLMNLCWTYDVENRPGF  619 (635)
T ss_dssp             C-----------------------CCC--------------------------CCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             C-----------------------CCC--------------------------CCCCCCHHHHHHHHHHcCCCHhHCcCH
Confidence            1                       111                          112456789999999999999999999


Q ss_pred             HHHHc
Q 015532          381 REALR  385 (405)
Q Consensus       381 ~elL~  385 (405)
                      +++++
T Consensus       620 ~~l~~  624 (635)
T 4fl3_A          620 AAVEL  624 (635)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=6.7e-39  Score=303.42  Aligned_cols=243  Identities=19%  Similarity=0.217  Sum_probs=173.9

Q ss_pred             ceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh--hhHHHHHHHHHHHHHhhcCCCCCc-----
Q 015532           82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR-----  154 (405)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~il~~l~~~~~~~~~-----  154 (405)
                      +++.......++|++.+.||+|+||.||+|++ .+++.||||+++....  ....+.+|+.+++.+.|+++....     
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   98 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT   98 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence            34444556678999999999999999999986 4688999999865332  223578899999999999984322     


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCCCcEEEecccccccCCc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAEYVKVPDY  205 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIli~~~~~~k~~df  205 (405)
                                                ...+++..+..++.||+.||.|||++   ||+||||||+|||++.++       
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~-------  171 (326)
T 3uim_A           99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF-------  171 (326)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC-------
T ss_pred             CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC-------
Confidence                                      12378899999999999999999999   999999999999997655       


Q ss_pred             cccccCCCCCCcccCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          206 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                                          .++|+|||++.......    ....||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       172 --------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  231 (326)
T 3uim_A          172 --------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG  231 (326)
T ss_dssp             --------------------CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHC
T ss_pred             --------------------CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhC
Confidence                                45666666665433221    224589999999999988899999999999999999999


Q ss_pred             CCCCCCCC-----hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhccc
Q 015532          282 EALFQTHE-----NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  356 (405)
Q Consensus       282 ~~pf~~~~-----~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (405)
                      ..||....     .......+...                   ..........                 ..........
T Consensus       232 ~~pf~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~-----------------~~~~~~~~~~  275 (326)
T 3uim_A          232 QRAFDLARLANDDDVMLLDWVKGL-------------------LKEKKLEALV-----------------DVDLQGNYKD  275 (326)
T ss_dssp             CCSBCHHHHTTTSCSBHHHHHTTT-------------------TSSCCSTTSS-----------------CTTCTTSCCH
T ss_pred             CCcccccccccccchhHHHHHHHH-------------------hhchhhhhhc-----------------ChhhccccCH
Confidence            99995210     00000000000                   0000000000                 0001111122


Q ss_pred             CchHHHHHHHHHccccCCCCCCCHHHHHcCCC
Q 015532          357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPF  388 (405)
Q Consensus       357 ~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~  388 (405)
                      ..+..+.+|+.+||+.||++|||+.|+++|-.
T Consensus       276 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          276 EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            34578999999999999999999999998743

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=7.1e-38  Score=293.00  Aligned_cols=218  Identities=23%  Similarity=0.447  Sum_probs=160.3

Q ss_pred             cCCCeEEE-eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHH-HHHhhcCCCCCc-------------
Q 015532           90 LTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-QRLARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~-~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il-~~l~~~~~~~~~-------------  154 (405)
                      +.++|.+. +.||+|+||.||+|.+..+++.||||+++..    ....+|+.++ +.+.|+++....             
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            44567777 7899999999999999999999999999653    3466788888 555777763211             


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++..+                
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~----------------  154 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR----------------  154 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS----------------
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCC----------------
Confidence                                12478999999999999999999999999999999999997521                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                              .+..++|+|||++....                   +..++.++|||||||++|+|++|..||.+.......
T Consensus       155 --------~~~~~kl~Dfg~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~  207 (299)
T 3m2w_A          155 --------PNAILKLTDFGFAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS  207 (299)
T ss_dssp             --------TTCCEEECCCTTCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------
T ss_pred             --------CCCcEEEeccccccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh
Confidence                    24468899999875432                   235778999999999999999999999765432211


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+..                         ......                 ..........+++++.+||.+||+.||
T Consensus       208 ~~~~~-------------------------~~~~~~-----------------~~~~~~~~~~~~~~~~~li~~~l~~dP  245 (299)
T 3m2w_A          208 PGMKT-------------------------RIRMGQ-----------------YEFPNPEWSEVSEEVKMLIRNLLKTEP  245 (299)
T ss_dssp             CCSCC-------------------------SSCTTC-----------------CSSCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHH-------------------------HHhhcc-----------------ccCCchhcccCCHHHHHHHHHHcccCh
Confidence            10000                         000000                 000001113457799999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ++|||+.|+|+||||++....+
T Consensus       246 ~~Rps~~e~l~hp~~~~~~~~~  267 (299)
T 3m2w_A          246 TQRMTITEFMNHPWIMQSTKVP  267 (299)
T ss_dssp             TTSCCHHHHHTSHHHHTGGGSC
T ss_pred             hhCCCHHHHhcChhhcccccCC
Confidence            9999999999999998765443

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=7.7e-38  Score=295.37  Aligned_cols=236  Identities=25%  Similarity=0.367  Sum_probs=168.3

Q ss_pred             ccCCCe-EEEeeeecccceeEEEEEe----cCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-------
Q 015532           89 NLTPRY-RILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-------  154 (405)
Q Consensus        89 ~~~~~y-~~~~~LG~G~fg~V~~a~~----~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-------  154 (405)
                      .+.++| +++++||+|+||+||+|..    ..+++.||||+++...  ...+.+.+|+++++.+.|+++....       
T Consensus        27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (318)
T 3lxp_A           27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG  106 (318)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC
Confidence            355666 9999999999999988754    4578999999997542  3456788999999999999874311       


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+             
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~-------------  173 (318)
T 3lxp_A          107 AASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLV-------------  173 (318)
T ss_dssp             TTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE-------------
T ss_pred             CceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCE-------------
Confidence                                 1247889999999999999999999999999999999999776655             


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                    +|+|||++......      .....||..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       174 --------------kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          174 --------------KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             --------------EECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             --------------EECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence                          55555544433221      1224578889999999998899999999999999999999999965


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .....     ....+........   .........+..                          ......++..+.+||.
T Consensus       240 ~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~  285 (318)
T 3lxp_A          240 PPTKF-----LELIGIAQGQMTV---LRLTELLERGER--------------------------LPRPDKCPAEVYHLMK  285 (318)
T ss_dssp             HHHHH-----HHHHCSCCHHHHH---HHHHHHHHTTCC--------------------------CCCCTTCCHHHHHHHH
T ss_pred             cchhh-----hhhhcccccchhH---HHHHHHHhcccC--------------------------CCCCccccHHHHHHHH
Confidence            32211     0000100000000   000000111100                          1122345778999999


Q ss_pred             HccccCCCCCCCHHHHHc
Q 015532          368 GLLRYDPAERLKAREALR  385 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~  385 (405)
                      +||+.||++|||+.|+++
T Consensus       286 ~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          286 NCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCcccCcCHHHHHH
Confidence            999999999999999985

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1e-37  Score=286.97  Aligned_cols=215  Identities=15%  Similarity=0.138  Sum_probs=167.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|++.+.||+|+||.||+|++.  ++.||||+++...   ...+.+.+|+.+++.+.|+++....              
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            67999999999999999999985  8889999997532   3446688999999999999873210              


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                       ...+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+               
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~---------------  152 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA---------------  152 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCE---------------
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcce---------------
Confidence                             113789999999999999999999999  9999999999999876644               


Q ss_pred             CcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCC---chhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY---PCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                                  +|+|||++....  .....||+.|+|||++.+..++.   ++|||||||++|+|++|..||.+....+
T Consensus       153 ------------~l~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  218 (271)
T 3kmu_A          153 ------------RISMADVKFSFQ--SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME  218 (271)
T ss_dssp             ------------EEEGGGSCCTTS--CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH
T ss_pred             ------------eEEeccceeeec--ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH
Confidence                        444333332211  12246899999999999865544   7999999999999999999998877666


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.....                      ..                          .....+++.+.+||.+||+.
T Consensus       219 ~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~  250 (271)
T 3kmu_A          219 IGMKVALEGL----------------------RP--------------------------TIPPGISPHVSKLMKICMNE  250 (271)
T ss_dssp             HHHHHHHSCC----------------------CC--------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCC----------------------CC--------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            5443322100                      00                          11234567899999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      ||++|||++|+++
T Consensus       251 ~p~~Rps~~~il~  263 (271)
T 3kmu_A          251 DPAKRPKFDMIVP  263 (271)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999986

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=7.2e-38  Score=295.10  Aligned_cols=221  Identities=24%  Similarity=0.311  Sum_probs=166.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.+++.+.|+++....               
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46899999999999999999999999999999988543 34456788999999999999985421               


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++..++.++.||+.||.|||++||+||||||+|||++.++                
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~----------------  171 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG----------------  171 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS----------------
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC----------------
Confidence                                13478899999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCC------------ccceecCCCcchhHHHhCCC---CCCchhHHHHHHHHHHHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQD------------HSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC  279 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~------------~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~~ll  279 (405)
                                 .++|+|||++......            .....||+.|+|||++.+..   ++.++|||||||++|+|+
T Consensus       172 -----------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~  240 (317)
T 2buj_A          172 -----------QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM  240 (317)
T ss_dssp             -----------CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHH
T ss_pred             -----------CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHH
Confidence                       4566666655433211            01235799999999987654   689999999999999999


Q ss_pred             hCCCCCCCCChHH-HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCc
Q 015532          280 SGEALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  358 (405)
Q Consensus       280 tg~~pf~~~~~~~-~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (405)
                      +|..||....... .......                      .  ...                        .......
T Consensus       241 ~g~~p~~~~~~~~~~~~~~~~----------------------~--~~~------------------------~~~~~~~  272 (317)
T 2buj_A          241 FGEGPYDMVFQKGDSVALAVQ----------------------N--QLS------------------------IPQSPRH  272 (317)
T ss_dssp             HSSCTTHHHHHTTSCHHHHHH----------------------C--C--------------------------CCCCTTS
T ss_pred             hCCCChhhhhcccchhhHHhh----------------------c--cCC------------------------CCccccC
Confidence            9999994310000 0000000                      0  000                        0111245


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          359 AGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       359 ~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      +..+.+||.+||+.||++|||+.+++++
T Consensus       273 ~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          273 SSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            6789999999999999999999999985

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.1e-38  Score=302.48  Aligned_cols=219  Identities=17%  Similarity=0.206  Sum_probs=162.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC---CcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ..|++.+.||+|+||+||+|++..+   +..||||.++...  ...+.+.+|+.+++++.|+++....            
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            3589999999999999999997543   3468999986432  3456788999999999999884422            


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                  
T Consensus       169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~------------------  230 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT------------------  230 (373)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC------------------
T ss_pred             EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCC------------------
Confidence                             123677889999999999999999999999999999999976654                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCC-------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  289 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~  289 (405)
                               +||+|||++......       .....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+
T Consensus       231 ---------~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~  301 (373)
T 3c1x_A          231 ---------VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN  301 (373)
T ss_dssp             ---------EEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred             ---------EEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC
Confidence                     455555555432211       122457788999999999999999999999999999999 788887765


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+....+.+..                       ..                          ..+..++..+.+||.+|
T Consensus       302 ~~~~~~~~~~~~-----------------------~~--------------------------~~p~~~~~~l~~li~~c  332 (373)
T 3c1x_A          302 TFDITVYLLQGR-----------------------RL--------------------------LQPEYCPDPLYEVMLKC  332 (373)
T ss_dssp             SSCHHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCC-----------------------CC--------------------------CCCCCCCHHHHHHHHHH
Confidence            444333221110                       00                          01123467899999999


Q ss_pred             cccCCCCCCCHHHHHcC
Q 015532          370 LRYDPAERLKAREALRH  386 (405)
Q Consensus       370 L~~dP~~Rpta~elL~h  386 (405)
                      |+.||++|||+.|++++
T Consensus       333 l~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          333 WHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999863

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=288.09  Aligned_cols=233  Identities=22%  Similarity=0.336  Sum_probs=169.0

Q ss_pred             CCeEEEeeeecccceeEEEEE----ecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~----~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||.||+|+    +..+++.||||+++... ...+.+.+|+.+++.+.|+++....            
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            569999999999999999998    46689999999996533 3456788999999999999874311            


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+                
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~----------------  184 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV----------------  184 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE----------------
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcE----------------
Confidence                              1247888999999999999999999999999999999999876654                


Q ss_pred             cccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                 +|+|||++.......      ....++..|+|||++.+..++.++|||||||++|+|++|..||.... 
T Consensus       185 -----------kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~-  252 (326)
T 2w1i_A          185 -----------KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP-  252 (326)
T ss_dssp             -----------EECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-
T ss_pred             -----------EEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH-
Confidence                       555555554332221      12356778999999998889999999999999999999999986421 


Q ss_pred             HHHHHHHHHHhCCCCh-HHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          291 LEHLAMMERVLGPLPH-HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                       ..   ..+..+..+. ....   .........+.+.                          .....++.++.+||.+|
T Consensus       253 -~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~c  299 (326)
T 2w1i_A          253 -AE---FMRMIGNDKQGQMIV---FHLIELLKNNGRL--------------------------PRPDGCPDEIYMIMTEC  299 (326)
T ss_dssp             -HH---HHHHHCTTCCTHHHH---HHHHHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHH
T ss_pred             -HH---HHHhhccccchhhhH---HHHHHHhhcCCCC--------------------------CCCCcccHHHHHHHHHH
Confidence             11   1111111110 0000   0000001111010                          11234577899999999


Q ss_pred             cccCCCCCCCHHHHHc
Q 015532          370 LRYDPAERLKAREALR  385 (405)
Q Consensus       370 L~~dP~~Rpta~elL~  385 (405)
                      |+.||++|||+.|+++
T Consensus       300 l~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          300 WNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             SCSSGGGSCCHHHHHH
T ss_pred             cCCChhhCcCHHHHHH
Confidence            9999999999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.2e-37  Score=297.85  Aligned_cols=180  Identities=22%  Similarity=0.316  Sum_probs=139.0

Q ss_pred             cCCCeEEEeeeecccceeEEEEE-----ecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh---hcCCCCC--------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA---RHDIGGT--------  153 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~-----~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~---~~~~~~~--------  153 (405)
                      ..++|++.+.||+|+||+||+|.     +..+++.||||+++..  ....+..|+++++.+.   |+++...        
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence            35789999999999999999994     6678899999999753  3455778888888887   5655221        


Q ss_pred             ------------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccc
Q 015532          154 ------------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  209 (405)
Q Consensus       154 ------------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~  209 (405)
                                              ....+++..++.++.||+.||+|||++||+||||||+|||++......-       
T Consensus       141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~-------  213 (365)
T 3e7e_A          141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD-------  213 (365)
T ss_dssp             CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC--------
T ss_pred             CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc-------
Confidence                                    1235889999999999999999999999999999999999976210000       


Q ss_pred             cCCCCCCcccCCCCCCCceeccCCCCcccc---C--CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCC
Q 015532          210 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEH---Q--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  284 (405)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~p  284 (405)
                               ........+||+|||++....   .  .....+||+.|+|||++.+..|+.++|||||||++|+|++|+.|
T Consensus       214 ---------~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  284 (365)
T 3e7e_A          214 ---------DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM  284 (365)
T ss_dssp             --------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred             ---------ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCc
Confidence                     000124568888898885432   1  12235799999999999999999999999999999999999999


Q ss_pred             CCC
Q 015532          285 FQT  287 (405)
Q Consensus       285 f~~  287 (405)
                      |..
T Consensus       285 f~~  287 (365)
T 3e7e_A          285 KVK  287 (365)
T ss_dssp             CEE
T ss_pred             ccc
Confidence            954

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=9.7e-38  Score=296.92  Aligned_cols=239  Identities=20%  Similarity=0.251  Sum_probs=167.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---------hhhHHHHHHHHHHHHHh---------hcCCC--
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLA---------RHDIG--  151 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~il~~l~---------~~~~~--  151 (405)
                      ++|++.+.||+|+||+||+|++  +++.||||+++...         ...+.+.+|+.+++.+.         |++++  
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            6799999999999999999998  68999999996532         12367889999999997         33321  


Q ss_pred             ------------------------------------CC-c-----------------cccCCHHHHHHHHHHHHHHHHHH
Q 015532          152 ------------------------------------GT-R-----------------YRSFPIDLVRELGRQLLESVAFM  177 (405)
Q Consensus       152 ------------------------------------~~-~-----------------~~~l~~~~~~~~~~qi~~aL~~L  177 (405)
                                                          .. .                 ...+++..++.++.||+.||.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l  177 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA  177 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence                                                00 0                 13468999999999999999999


Q ss_pred             H-HCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHH
Q 015532          178 H-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEV  256 (405)
Q Consensus       178 H-~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~  256 (405)
                      | ++||+||||||+|||++.++... .++++...      ..........+||+|||+++.....  ..+||+.|+|||+
T Consensus       178 H~~~~ivHrDlKp~NILl~~~~~~~-~~~~~~~~------~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~  248 (336)
T 2vuw_A          178 EASLRFEHRDLHWGNVLLKKTSLKK-LHYTLNGK------SSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDL  248 (336)
T ss_dssp             HHHHCCBCSCCCGGGEEEEECSCSE-EEEEETTE------EEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGG
T ss_pred             HHhCCEeECCCCHHHEEEeccCCcc-eeeeccCc------cccccCCCceEEEeeccccEecCCC--cEEEeecccChhh
Confidence            9 99999999999999998765211 11111000      0000012236899999999866543  4589999999999


Q ss_pred             HhCCCCCCchhHHHHHHH-HHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCc
Q 015532          257 ILGLGWNYPCDLWSVGCI-LVELCSGEALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS  334 (405)
Q Consensus       257 ~~~~~~~~~~DiwSlG~i-l~~lltg~~pf~~~~~~~-~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (405)
                      +.+.. +.++|||||+++ .+++++|..||....... ....+....                         .+...   
T Consensus       249 ~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~~~~---  299 (336)
T 2vuw_A          249 FTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQM-------------------------TFKTK---  299 (336)
T ss_dssp             GCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTC-------------------------CCSSC---
T ss_pred             hcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhh-------------------------ccCcc---
Confidence            98766 899999998777 778888999984321101 111111000                         00000   


Q ss_pred             hhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHH-cCCCCC
Q 015532          335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL-RHPFFT  390 (405)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL-~hp~f~  390 (405)
                                     ........+++++.+||.+||++|     ||+|+| +||||+
T Consensus       300 ---------------~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          300 ---------------CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ---------------CCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ---------------cchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                           000011234778999999999987     999999 999996

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.4e-37  Score=290.12  Aligned_cols=228  Identities=22%  Similarity=0.316  Sum_probs=164.3

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecch-----hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-----~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      |...+.||+|+||.||+|.+  +++.||||++...     ....+.+.+|+.+++.+.|+++....              
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence            44458999999999999986  5788999998642     23456788999999999999874321              


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||.|||++||+||||||+||+++.++.                   
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~-------------------  171 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT-------------------  171 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC-------------------
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCc-------------------
Confidence                            124788999999999999999999999999999999999976554                   


Q ss_pred             cCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                              ++|+|||++......     .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......+.
T Consensus       172 --------~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  242 (307)
T 2nru_A          172 --------AKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL  242 (307)
T ss_dssp             --------EEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred             --------EEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence                    556666655433221     122478999999999876 588999999999999999999999987544332


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+.+........+        ..+..                           ..........+..+.+++.+||+.|
T Consensus       243 ~~~~~~~~~~~~~~~--------~~~~~---------------------------~~~~~~~~~~~~~l~~li~~cl~~~  287 (307)
T 2nru_A          243 LLDIKEEIEDEEKTI--------EDYID---------------------------KKMNDADSTSVEAMYSVASQCLHEK  287 (307)
T ss_dssp             TTHHHHHHHTTSCCH--------HHHSC---------------------------SSCSCCCHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHHHHhhhhhhhh--------hhhcc---------------------------ccccccchHHHHHHHHHHHHHcCCC
Confidence            222211110000000        00000                           0000011223567899999999999


Q ss_pred             CCCCCCHHHHHcC
Q 015532          374 PAERLKAREALRH  386 (405)
Q Consensus       374 P~~Rpta~elL~h  386 (405)
                      |++|||+.+++++
T Consensus       288 p~~Rps~~~l~~~  300 (307)
T 2nru_A          288 KNKRPDIKKVQQL  300 (307)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999863

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=5.1e-37  Score=292.25  Aligned_cols=233  Identities=19%  Similarity=0.243  Sum_probs=169.1

Q ss_pred             CceEeeCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHH--HhhcCCCCCc----
Q 015532           81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTR----  154 (405)
Q Consensus        81 ~~~~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~--l~~~~~~~~~----  154 (405)
                      ..++..++.+.++|++.+.||+|+||.||+|++  +++.||||+++...  ...+.+|++++..  +.|+++....    
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~ni~~~~~~~~  106 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADN  106 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh--HHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence            344556667778999999999999999999998  48899999996533  4557789999988  7888874211    


Q ss_pred             --------------------------cccCCHHHHHHHHHHHHHHHHHHH--------HCCcEecCCCCCcEEEeccccc
Q 015532          155 --------------------------YRSFPIDLVRELGRQLLESVAFMH--------ELRLIHTDLKPENILLVSAEYV  200 (405)
Q Consensus       155 --------------------------~~~l~~~~~~~~~~qi~~aL~~LH--------~~givHrDlkp~NIli~~~~~~  200 (405)
                                                ...+++..++.++.||+.||.|||        ++||+||||||+|||++.++  
T Consensus       107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~--  184 (342)
T 1b6c_B          107 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--  184 (342)
T ss_dssp             CCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS--
T ss_pred             ccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC--
Confidence                                      124688899999999999999999        89999999999999997655  


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-------cceecCCCcchhHHHhCCC------CCCchh
Q 015532          201 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGLG------WNYPCD  267 (405)
Q Consensus       201 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~------~~~~~D  267 (405)
                                               .+||+|||++.......       ....||+.|+|||++.+..      ++.++|
T Consensus       185 -------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  239 (342)
T 1b6c_B          185 -------------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRAD  239 (342)
T ss_dssp             -------------------------CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHH
T ss_pred             -------------------------CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCccc
Confidence                                     45666666664433221       2347999999999998753      336899


Q ss_pred             HHHHHHHHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCC
Q 015532          268 LWSVGCILVELCSG----------EALFQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT  333 (405)
Q Consensus       268 iwSlG~il~~lltg----------~~pf~~~~~----~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (405)
                      ||||||++|+|++|          ..||.....    .+.+.....                     ....+...+.   
T Consensus       240 i~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~---  295 (342)
T 1b6c_B          240 IYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC---------------------EQKLRPNIPN---  295 (342)
T ss_dssp             HHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT---------------------TSCCCCCCCG---
T ss_pred             HHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHH---------------------HHHhCCCCcc---
Confidence            99999999999999          778865321    111111100                     0000000000   


Q ss_pred             chhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                                        .......+..+.+||.+||+.||++|||+.|+++|
T Consensus       296 ------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          296 ------------------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             ------------------GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             ------------------cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                              00011235678999999999999999999999975

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.8e-36  Score=310.55  Aligned_cols=220  Identities=24%  Similarity=0.311  Sum_probs=172.6

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCC---CcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ..++|++.+.||+|+||.||+|.+..+   +..||||+++..  ....+.+.+|+.+++.+.|+++....          
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~l  467 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI  467 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEE
Confidence            347899999999999999999998643   467999998643  33457788999999999999984321          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                  
T Consensus       468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~------------------  529 (656)
T 2j0j_A          468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC------------------  529 (656)
T ss_dssp             EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE------------------
T ss_pred             EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCC------------------
Confidence                             124788899999999999999999999999999999999987665                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                               +||+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       530 ---------vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  600 (656)
T 2j0j_A          530 ---------VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  600 (656)
T ss_dssp             ---------EEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ---------EEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence                     4555555554432221    12356789999999999899999999999999999997 999999887776


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+....                       ...                          ....+++.+.+||.+||..
T Consensus       601 ~~~~i~~~~-----------------------~~~--------------------------~~~~~~~~l~~li~~~l~~  631 (656)
T 2j0j_A          601 VIGRIENGE-----------------------RLP--------------------------MPPNCPPTLYSLMTKCWAY  631 (656)
T ss_dssp             HHHHHHHTC-----------------------CCC--------------------------CCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCC-----------------------CCC--------------------------CCccccHHHHHHHHHHcCC
Confidence            655543311                       000                          1124467899999999999


Q ss_pred             CCCCCCCHHHHHc
Q 015532          373 DPAERLKAREALR  385 (405)
Q Consensus       373 dP~~Rpta~elL~  385 (405)
                      ||++|||+.|+++
T Consensus       632 dP~~RPs~~el~~  644 (656)
T 2j0j_A          632 DPSRRPRFTELKA  644 (656)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhHCcCHHHHHH
Confidence            9999999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1e-36  Score=316.08  Aligned_cols=221  Identities=23%  Similarity=0.332  Sum_probs=175.6

Q ss_pred             EeeCCccCCCeEEEeeeecccceeEEEEEecC-CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        84 ~~~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~-~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      +..|+.+.++|++.+.||+|+||+||+|++.. +++.||||++...  ....+.+.+|+.+++.+.|+++....      
T Consensus        72 ~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  151 (681)
T 2pzi_A           72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHT  151 (681)
T ss_dssp             SCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEE
T ss_pred             CCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeec
Confidence            34577788999999999999999999999976 7899999998543  23456678999999999999884311      


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++.+++.++.||+.||.|||++||+||||||+|||++.+             
T Consensus       152 ~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-------------  218 (681)
T 2pzi_A          152 DRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-------------  218 (681)
T ss_dssp             CTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-------------
T ss_pred             CCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-------------
Confidence                                    1357899999999999999999999999999999999999642             


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                     .+||+|||++...... ....||+.|+|||++.+. ++.++|||||||++|+|++|.+||.+...
T Consensus       219 ---------------~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~  281 (681)
T 2pzi_A          219 ---------------QLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV  281 (681)
T ss_dssp             ---------------CEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC
T ss_pred             ---------------cEEEEecccchhcccC-CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc
Confidence                           4788888888765443 445799999999999874 48899999999999999999998864211


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .           ..+..                            .           +      ....++.+.+||.+||
T Consensus       282 ~-----------~~~~~----------------------------~-----------~------~~~~~~~l~~li~~~l  305 (681)
T 2pzi_A          282 D-----------GLPED----------------------------D-----------P------VLKTYDSYGRLLRRAI  305 (681)
T ss_dssp             S-----------SCCTT----------------------------C-----------H------HHHHCHHHHHHHHHHT
T ss_pred             c-----------ccccc----------------------------c-----------c------ccccCHHHHHHHhhhc
Confidence            0           00000                            0           0      0012357889999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~  390 (405)
                      +.||++||++.+.+.|+|+.
T Consensus       306 ~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          306 DPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             CSSGGGSCSSHHHHHHHHHH
T ss_pred             cCChhhCCCHHHHHHHHHHH
Confidence            99999999988888887763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.7e-36  Score=285.83  Aligned_cols=217  Identities=19%  Similarity=0.237  Sum_probs=165.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ..++|++.+.||+|+||.||+|++..   .||+|+++...   ...+.+.+|+.+++.+.|+++....            
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            35789999999999999999999853   49999986432   2234566799999999999884322            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||.|||++||+||||||+|||++ ++.                   
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~-------------------  167 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGK-------------------  167 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---C-------------------
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCC-------------------
Confidence                            12478899999999999999999999999999999999996 343                   


Q ss_pred             cCCCCCCCceeccCCCCcccc--------CCccceecCCCcchhHHHhC---------CCCCCchhHHHHHHHHHHHHhC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEH--------QDHSYVVSTRHYRAPEVILG---------LGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~--------~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwSlG~il~~lltg  281 (405)
                              ++|+|||++....        .......||+.|+|||++.+         ..++.++|||||||++|+|++|
T Consensus       168 --------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g  239 (319)
T 2y4i_B          168 --------VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR  239 (319)
T ss_dssp             --------CEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHS
T ss_pred             --------EEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence                    5666666544321        11223468999999999975         3478899999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ..||...........+.....+.                                                .....++..
T Consensus       240 ~~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~  271 (319)
T 2y4i_B          240 EWPFKTQPAEAIIWQMGTGMKPN------------------------------------------------LSQIGMGKE  271 (319)
T ss_dssp             SCSSSSCCHHHHHHHHHTTCCCC------------------------------------------------CCCSSCCTT
T ss_pred             CCCCCCCCHHHHHHHhccCCCCC------------------------------------------------CCcCCCCHH
Confidence            99998877665554432211000                                                001134567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHc
Q 015532          362 LIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      +.+||.+||..||++|||+.++++
T Consensus       272 l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          272 ISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHhcCChhhCcCHHHHHH
Confidence            899999999999999999999997

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.5e-36  Score=282.37  Aligned_cols=207  Identities=15%  Similarity=0.034  Sum_probs=156.0

Q ss_pred             EeeCC-ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc----
Q 015532           84 FAIGE-NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR----  154 (405)
Q Consensus        84 ~~~~~-~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~----  154 (405)
                      +..|+ .+.++|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+.+|+.++..+.|+++....    
T Consensus        22 ~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~  101 (286)
T 3uqc_A           22 LVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH  101 (286)
T ss_dssp             CCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE
Confidence            44566 56789999999999999999999999999999999997542    2346788999999999999985422    


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           .......++..++.||+.||+|||++||+||||||+|||++.+|.              
T Consensus       102 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~--------------  167 (286)
T 3uqc_A          102 TRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGD--------------  167 (286)
T ss_dssp             ETTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSC--------------
T ss_pred             ECCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCC--------------
Confidence                                 112355678889999999999999999999999999999987654              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                                   ++|+++                 .|++       .++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       168 -------------~kl~~~-----------------~~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~  210 (286)
T 3uqc_A          168 -------------VVLAYP-----------------ATMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG  210 (286)
T ss_dssp             -------------EEECSC-----------------CCCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC
T ss_pred             -------------EEEEec-----------------cccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh
Confidence                         455433                 2443       378999999999999999999999987543211


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +....+                            ...               ............+++.+.+||.+||+.|
T Consensus       211 ~~~~~~----------------------------~~~---------------~~~~~~~~~~~~~~~~l~~li~~~l~~d  247 (286)
T 3uqc_A          211 LAPAER----------------------------DTA---------------GQPIEPADIDRDIPFQISAVAARSVQGD  247 (286)
T ss_dssp             SEECCB----------------------------CTT---------------SCBCCHHHHCTTSCHHHHHHHHHHHCTT
T ss_pred             hHHHHH----------------------------Hhc---------------cCCCChhhcccCCCHHHHHHHHHHcccC
Confidence            100000                            000               0000011222456778999999999999


Q ss_pred             CCCCCCHHHHHc
Q 015532          374 PAERLKAREALR  385 (405)
Q Consensus       374 P~~Rpta~elL~  385 (405)
                      |++| |+.|+++
T Consensus       248 P~~R-s~~el~~  258 (286)
T 3uqc_A          248 GGIR-SASTLLN  258 (286)
T ss_dssp             SSCC-CHHHHHH
T ss_pred             CccC-CHHHHHH
Confidence            9999 9999986

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.92  E-value=2.6e-27  Score=239.70  Aligned_cols=156  Identities=17%  Similarity=0.079  Sum_probs=96.1

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecch-----------hhhhHHHHHHHHHHHHHh-hcCCCCCc----------
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----------NKYREAAMIEIDVLQRLA-RHDIGGTR----------  154 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-----------~~~~~~~~~E~~il~~l~-~~~~~~~~----------  154 (405)
                      ...++.|++|.+..++....|+.||+|++.+.           ....+.+.+|+++|+++. |+++....          
T Consensus       239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y  318 (569)
T 4azs_A          239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW  318 (569)
T ss_dssp             ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred             hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence            34578888888888888888999999999532           234567889999999994 55553211          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       .+.+++   ..|+.||+.||+|||++|||||||||+|||++.+|                   
T Consensus       319 LVMEyv~G~~L~d~i~~~~~l~~---~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg-------------------  376 (569)
T 4azs_A          319 LVMEKLPGRLLSDMLAAGEEIDR---EKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ-------------------  376 (569)
T ss_dssp             EEEECCCSEEHHHHHHTTCCCCH---HHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS-------------------
T ss_pred             EEEecCCCCcHHHHHHhCCCCCH---HHHHHHHHHHHHHHHHCCceeccCchHhEEECCCC-------------------
Confidence                             133444   35889999999999999999999999999997665                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCC
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                              .+||+|||+|+.....   ..+.+||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus       377 --------~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          377 --------HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             --------CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             --------CEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence                    4566666666543322   234689999999999987 46678999999999888766543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.88  E-value=3.6e-23  Score=208.22  Aligned_cols=161  Identities=19%  Similarity=0.171  Sum_probs=116.6

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---------hhhHHHHHHHHHHHHHhhcCCCCCcc---------
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRY---------  155 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~il~~l~~~~~~~~~~---------  155 (405)
                      +...+.||+|+||+||+|..  .++.+|+|+.....         ...+.+.+|+++++++.|+++.....         
T Consensus       338 ~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          338 KIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             ----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred             CCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence            34567999999999999954  47789999863211         12345789999999999999973210         


Q ss_pred             ---ccC---CHHH----HHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCC
Q 015532          156 ---RSF---PIDL----VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS  225 (405)
Q Consensus       156 ---~~l---~~~~----~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~  225 (405)
                         ..+   +...    +..++.||+.||+|||++||+||||||+|||++.                             
T Consensus       416 lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-----------------------------  466 (540)
T 3en9_A          416 IMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-----------------------------  466 (540)
T ss_dssp             EEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----------------------------
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----------------------------
Confidence               000   1111    5689999999999999999999999999999853                             


Q ss_pred             CceeccCCCCccccCCc----------cceecCCCcchhHHHhC--CCCCCchhHHHHHHHHHHHHhCCCCC
Q 015532          226 AIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALF  285 (405)
Q Consensus       226 ~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~lltg~~pf  285 (405)
                      .+||+|||+++......          ...+||+.|||||++.+  ..|+..+|+||..+-..+.+.++.+|
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            57888888887665432          24689999999999987  56888899999998888887777666

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.87  E-value=6e-22  Score=183.15  Aligned_cols=127  Identities=26%  Similarity=0.292  Sum_probs=98.6

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-------------------hhhHHHHHHHHHHHHHhhcCCCC-
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------------------KYREAAMIEIDVLQRLARHDIGG-  152 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------------------~~~~~~~~E~~il~~l~~~~~~~-  152 (405)
                      .|.+.+.||+|+||.||+|.+ .+++.||||+++...                   .....+.+|+.+++.+.|..+.. 
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~  169 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKV  169 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCE
T ss_pred             EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeE
Confidence            466779999999999999999 889999999996422                   13456789999999998422211 


Q ss_pred             ----------------CccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          153 ----------------TRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       153 ----------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                      .+.. +.......++.||+.||.|||++||+||||||+|||++ ++                  
T Consensus       170 ~~~~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~------------------  229 (282)
T 1zar_A          170 YAWEGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE------------------  229 (282)
T ss_dssp             EEEETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT------------------
T ss_pred             EeccceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC------------------
Confidence                            1112 34456778999999999999999999999999999997 55                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG  259 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~  259 (405)
                               .++|+|||++.          .+..|+|||++.+
T Consensus       230 ---------~vkl~DFG~a~----------~~~~~~a~e~l~r  253 (282)
T 1zar_A          230 ---------GIWIIDFPQSV----------EVGEEGWREILER  253 (282)
T ss_dssp             ---------EEEECCCTTCE----------ETTSTTHHHHHHH
T ss_pred             ---------cEEEEECCCCe----------ECCCCCHHHHHHH
Confidence                     46788888774          3456899999854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.76  E-value=2.8e-18  Score=156.49  Aligned_cols=116  Identities=19%  Similarity=0.139  Sum_probs=90.5

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcE--EEEEEecchhh-------------------------hhHHHHHHHHHHHHHh
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSINK-------------------------YREAAMIEIDVLQRLA  146 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~--vAiK~~~~~~~-------------------------~~~~~~~E~~il~~l~  146 (405)
                      |++.+.||+|+||.||+|.+..+|+.  ||||+++....                         ....+.+|+.+|..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999778888  99998753211                         1135778999999999


Q ss_pred             hcCCCCC--------------cc------cc-------CCHHHHHHHHHHHHHHHHHHH-HCCcEecCCCCCcEEEeccc
Q 015532          147 RHDIGGT--------------RY------RS-------FPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       147 ~~~~~~~--------------~~------~~-------l~~~~~~~~~~qi~~aL~~LH-~~givHrDlkp~NIli~~~~  198 (405)
                      |+++...              ..      ..       .++..+..++.||+.||.||| ++||+||||||+|||++.  
T Consensus       129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--  206 (258)
T 1zth_A          129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--  206 (258)
T ss_dssp             HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--
T ss_pred             hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--
Confidence            8754110              00      01       123367889999999999999 999999999999999842  


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccc
Q 015532          199 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE  238 (405)
Q Consensus       199 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  238 (405)
                                                 .++|+|||+|...
T Consensus       207 ---------------------------~~~liDFG~a~~~  219 (258)
T 1zth_A          207 ---------------------------KVYFIDMGQAVTL  219 (258)
T ss_dssp             ---------------------------SEEECCCTTCEET
T ss_pred             ---------------------------cEEEEECcccccC
Confidence                                       5788999988654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.65  E-value=4.5e-16  Score=148.14  Aligned_cols=105  Identities=22%  Similarity=0.213  Sum_probs=79.6

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-----------------------hhhHHHHHHHHHHHHHhhcCC
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------KYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----------------------~~~~~~~~E~~il~~l~~~~~  150 (405)
                      |++.+.||+|+||.||+|.+. +|+.||||+++...                       ..+-...+|...|.++.+..+
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999984 68899999975210                       001123468888888876554


Q ss_pred             CCC-------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccc
Q 015532          151 GGT-------------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  199 (405)
Q Consensus       151 ~~~-------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~  199 (405)
                      ...                   ............++.||+.+|.+||++|||||||||.|||++.+|.
T Consensus       176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          176 PVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             SCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred             CCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence            211                   0111233456788999999999999999999999999999998763

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.71  E-value=4.2e-08  Score=88.78  Aligned_cols=86  Identities=13%  Similarity=0.026  Sum_probs=59.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      +.|++...++.|+++.||++...  ++.+++|+..... .....+.+|+.+++.+.....+-..                
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            45899999999999999999854  5789999986421 2234578899999999653211110                


Q ss_pred             --cccC-----CHHHHHHHHHHHHHHHHHHHH
Q 015532          155 --YRSF-----PIDLVRELGRQLLESVAFMHE  179 (405)
Q Consensus       155 --~~~l-----~~~~~~~~~~qi~~aL~~LH~  179 (405)
                        ...+     +......++.++..+|..||+
T Consensus        92 i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           92 ADGVLCSEEYEDEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             CSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHH
T ss_pred             cCCeehhhccCCcccHHHHHHHHHHHHHHHhC
Confidence              0011     122345788999999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.66  E-value=5.1e-08  Score=87.79  Aligned_cols=87  Identities=13%  Similarity=-0.028  Sum_probs=56.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC-CCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~-~~~~----------------  154 (405)
                      ..|.+....+.|..+.||++.. .+|+.+++|+....  ....+..|+.+++.+.+..+ +...                
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            4566655555667799999965 45677999997643  23456789999999987644 1100                


Q ss_pred             --cccCC--HHHHHHHHHHHHHHHHHHHHCC
Q 015532          155 --YRSFP--IDLVRELGRQLLESVAFMHELR  181 (405)
Q Consensus       155 --~~~l~--~~~~~~~~~qi~~aL~~LH~~g  181 (405)
                        ...+.  ......++.++...|..||+..
T Consensus        97 i~G~~l~~~~~~~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           97 VPGQDLLSSHLAPAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             CSSEETTTSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred             cCCcccCcCcCCHhHHHHHHHHHHHHHhCCC
Confidence              11121  1122367788888899998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.52  E-value=2.4e-07  Score=85.86  Aligned_cols=76  Identities=14%  Similarity=0.195  Sum_probs=52.0

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc-CCC----------C----Cc--------
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIG----------G----TR--------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~-~~~----------~----~~--------  154 (405)
                      +.++.|.+..||++.     ..+++|+.... .....+.+|..+|+.+... .+.          .    ..        
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            468999999999863     34889986543 3456678899999998543 220          0    00        


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHH
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHE  179 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~  179 (405)
                              ...++..+...++.|++..|..||+
T Consensus       100 G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A          100 GVPLTPLLLNNLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeECCccccccCCHHHHHHHHHHHHHHHHHHHc
Confidence                    0123455667888999999999986

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.45  E-value=6.5e-07  Score=84.89  Aligned_cols=82  Identities=13%  Similarity=0.127  Sum_probs=55.8

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEec--chh--hhhHHHHHHHHHHHHHhhcCCC--------------CCc---
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SIN--KYREAAMIEIDVLQRLARHDIG--------------GTR---  154 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~--~~~--~~~~~~~~E~~il~~l~~~~~~--------------~~~---  154 (405)
                      .++.|+.|.++.||++...  +..+++|+..  ...  .....+.+|+.+++.|....+.              +..   
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            4678999999999999864  3568889875  322  2235677899999999864330              000   


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHH
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHE  179 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~  179 (405)
                                   ...++......++.+++..|..||+
T Consensus       120 me~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          120 MEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhC
Confidence                         1234577788899999999999997

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.55  E-value=0.00062  Score=62.76  Aligned_cols=46  Identities=17%  Similarity=0.185  Sum_probs=34.6

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      ++.++.|....||+.     +..+++|+-.. ......+..|..+|+.|.++
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~   69 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGC   69 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTT
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhc
Confidence            356889999999988     45578898643 23456678999999999864

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.08  E-value=0.002  Score=61.60  Aligned_cols=51  Identities=24%  Similarity=0.324  Sum_probs=34.7

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchh--------hhhHHHHHHHHHHHHHhh
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------KYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--------~~~~~~~~E~~il~~l~~  147 (405)
                      .+.||.|.++.||++....+++.|+||......        ...+....|.++|+.+..
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~   93 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGE   93 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhh
Confidence            568999999999999876567789999864211        123445778899888754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.86  E-value=0.014  Score=53.94  Aligned_cols=46  Identities=15%  Similarity=0.203  Sum_probs=27.1

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhh
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~  147 (405)
                      ++.|+.|..+.||++... ++ .+++|+.....   +....|+.+++.|..
T Consensus        37 ~~~l~gG~~n~~~~v~~~-~~-~~vlk~~~~~~---~~~~~e~~~l~~L~~   82 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD-SG-AVCLKRIHRPE---KKALFSIFAQDYLAK   82 (346)
T ss_dssp             EEECC----CEEEEEEET-TE-EEEEEEECSCH---HHHHHHHHHHHHHHH
T ss_pred             eeeccccccCcEEEEEeC-CC-CEEEEecCCCH---HHHHHHHHHHHHHHH
Confidence            356777778999998763 33 48899986522   333456667776654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.79  E-value=0.0054  Score=56.10  Aligned_cols=48  Identities=10%  Similarity=-0.045  Sum_probs=31.9

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      ++.|+.|....+|++      +.+++|+.............|+.+++.+....+
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~   70 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGV   70 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTS
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCC
Confidence            578999999999998      347889875432211223468888888876544

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.65  E-value=0.012  Score=52.73  Aligned_cols=47  Identities=13%  Similarity=0.118  Sum_probs=33.3

Q ss_pred             eeecccce-eEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhh
Q 015532           99 KMGEGTFG-QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        99 ~LG~G~fg-~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~  147 (405)
                      .+..|..+ .||+......+..+.+|+-...  ....+..|..+|+.|..
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~   78 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTA   78 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTT
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhcc
Confidence            34455544 6999888777778899986543  34457789999998864

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.65  E-value=0.0077  Score=56.43  Aligned_cols=54  Identities=6%  Similarity=0.071  Sum_probs=36.9

Q ss_pred             EEEeee-ecccceeEEEEEec---C---CCcEEEEEEecchh---h-hhHHHHHHHHHHHHHhhc
Q 015532           95 RILSKM-GEGTFGQVVECFDN---E---KKELVAIKIVRSIN---K-YREAAMIEIDVLQRLARH  148 (405)
Q Consensus        95 ~~~~~L-G~G~fg~V~~a~~~---~---~~~~vAiK~~~~~~---~-~~~~~~~E~~il~~l~~~  148 (405)
                      ...+.| +.|..+.+|+....   .   +++.+++|+.....   . ....+..|+.+++.|...
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~   87 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGEL   87 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhc
Confidence            345678 88889999988753   0   15678899865432   1 124567899999988764

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.41  E-value=0.019  Score=51.95  Aligned_cols=55  Identities=11%  Similarity=-0.032  Sum_probs=41.1

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhc
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~  148 (405)
                      ...-++.+|.|..+.||+.+. .+|+.|.+|+-.... .....+..|...|+.|...
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~   71 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRS   71 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCS
T ss_pred             CeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhh
Confidence            456678999999999999986 467889999864322 2234567899999988643

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=95.86  E-value=0.061  Score=49.29  Aligned_cols=52  Identities=12%  Similarity=0.103  Sum_probs=32.3

Q ss_pred             EEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcC
Q 015532           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD  149 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~  149 (405)
                      .-++.|+.|....+|++... ++ .+++|+.... ...+.+..|+.+++.|....
T Consensus        25 ~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g   76 (322)
T 2ppq_A           25 TSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKG   76 (322)
T ss_dssp             EEEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTT
T ss_pred             eEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCC
Confidence            34567888988999998764 34 5789988652 12334566888888887643

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.83  E-value=0.063  Score=46.25  Aligned_cols=88  Identities=10%  Similarity=-0.053  Sum_probs=51.5

Q ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCCceeccCC
Q 015532          155 YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG  233 (405)
Q Consensus       155 ~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  233 (405)
                      ...++|++++.++.|.+.+|.-+-. ..-..+=+.|..|++..+|.+.+.+                            +
T Consensus        43 ~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~----------------------------~   94 (229)
T 2yle_A           43 NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP----------------------------A   94 (229)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC----------------------------C
T ss_pred             CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc----------------------------c
Confidence            4578999999999999999877621 1111233446788887776543221                            0


Q ss_pred             CCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh
Q 015532          234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       234 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt  280 (405)
                      .+.         .....+.+||... ...+.+.=|||||+++|..+-
T Consensus        95 ~s~---------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           95 ADD---------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ---------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ccc---------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            000         1122355777653 244577889999999998774

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.56  E-value=0.067  Score=51.56  Aligned_cols=54  Identities=13%  Similarity=0.190  Sum_probs=38.4

Q ss_pred             EEeeeecccceeEEEEEecC-------CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           96 ILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      -++.|+.|....||++....       .++.|++|+.... ...+.+..|..+++.|....+
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~  137 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHL  137 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTS
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCC
Confidence            35678889899999998643       2567899987431 111455679999998877654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=95.38  E-value=0.053  Score=51.32  Aligned_cols=53  Identities=13%  Similarity=0.194  Sum_probs=32.1

Q ss_pred             eeeecccceeEEEEEecC-------CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           98 SKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      +.|..|-...+|++....       .++.|.+|+............+|..+++.|....+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv  115 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSL  115 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTS
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCC
Confidence            567778888899988642       34678899864322234556689999998877654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=95.37  E-value=0.038  Score=51.95  Aligned_cols=54  Identities=17%  Similarity=0.158  Sum_probs=31.7

Q ss_pred             EeeeecccceeEEEEEecC--------CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           97 LSKMGEGTFGQVVECFDNE--------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~--------~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      .+.|+.|....+|++....        .++.+++|+.............|..+++.|....+
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~   99 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI   99 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC
Confidence            4578888888999988643        12578899875432211123568888888876544

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=94.93  E-value=0.11  Score=47.72  Aligned_cols=49  Identities=14%  Similarity=0.150  Sum_probs=33.4

Q ss_pred             eeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      ..|+ |....||++.. .+|+.+++|+.+......+....|..+++.|...
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~   80 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVND   80 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHT
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHc
Confidence            3466 77788998765 3455688999864323345566788888888654

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=94.02  E-value=0.17  Score=49.06  Aligned_cols=55  Identities=13%  Similarity=0.053  Sum_probs=34.6

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      -++.|+.|-...+|++.....+..|++|+........-....|..+++.|....+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl  166 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNI  166 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSS
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCC
Confidence            3567888989999999875445778899874321111112468888888876544

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=93.40  E-value=0.72  Score=42.17  Aligned_cols=49  Identities=27%  Similarity=0.258  Sum_probs=37.3

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhc
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~  148 (405)
                      -.+.|+.|.+..+|+...  ++..+++|+....  ....+..|...|+.|...
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~   88 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKT   88 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHT
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhh
Confidence            357899999999999875  3567889987543  355677899999988754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=92.38  E-value=0.063  Score=51.49  Aligned_cols=20  Identities=25%  Similarity=0.474  Sum_probs=16.7

Q ss_pred             HHCCcEecCCCCCcEEEecc
Q 015532          178 HELRLIHTDLKPENILLVSA  197 (405)
Q Consensus       178 H~~givHrDlkp~NIli~~~  197 (405)
                      +...++|+|+++.|||++.+
T Consensus       230 ~~~~liHGDl~~~Nil~~~~  249 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQD  249 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSS
T ss_pred             CCCeEEecCCCCCcEEEeCC
Confidence            35689999999999999643

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=91.01  E-value=0.49  Score=45.32  Aligned_cols=54  Identities=15%  Similarity=0.129  Sum_probs=34.2

Q ss_pred             EeeeecccceeEEEEEecCC-------CcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           97 LSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~-------~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      ++.|..|-...+|++.....       ++.|++|+........-...+|..+++.|....+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi  135 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINI  135 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTS
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCC
Confidence            45677788888999886521       5678899864322211223468888888776544

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=90.42  E-value=1.2  Score=42.25  Aligned_cols=15  Identities=40%  Similarity=0.636  Sum_probs=13.3

Q ss_pred             cEecCCCCCcEEEec
Q 015532          182 LIHTDLKPENILLVS  196 (405)
Q Consensus       182 ivHrDlkp~NIli~~  196 (405)
                      ++|+|+.+.|||+..
T Consensus       246 fcHnDl~~gNil~~~  260 (401)
T 3g15_A          246 FCHNDCQEGNILLLE  260 (401)
T ss_dssp             EECSCCCGGGEEEET
T ss_pred             eEEecCCCCeEEEec
Confidence            679999999999954

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=86.56  E-value=0.23  Score=45.69  Aligned_cols=17  Identities=24%  Similarity=0.649  Sum_probs=15.2

Q ss_pred             CCcEecCCCCCcEEEec
Q 015532          180 LRLIHTDLKPENILLVS  196 (405)
Q Consensus       180 ~givHrDlkp~NIli~~  196 (405)
                      ..++|+|+.+.|||++.
T Consensus       183 ~~lvHgD~~~~Nil~~~  199 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLP  199 (333)
T ss_dssp             CEEECSCCSGGGEEECT
T ss_pred             CeeEeCCcCcccEEecc
Confidence            47999999999999965

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=84.11  E-value=0.51  Score=43.62  Aligned_cols=27  Identities=26%  Similarity=0.480  Sum_probs=20.7

Q ss_pred             CCcEecCCCCCcEEEecccccccCCcc
Q 015532          180 LRLIHTDLKPENILLVSAEYVKVPDYK  206 (405)
Q Consensus       180 ~givHrDlkp~NIli~~~~~~k~~df~  206 (405)
                      ..++|+|+.+.||+++.++.+.+.||+
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e  232 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWD  232 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCS
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECC
Confidence            468999999999999766555555553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	405
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-46
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-42
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-42
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-42
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-42
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-41
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-40
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-40
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-39
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-39
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-39
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-39
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-39
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-38
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-38
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-37
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-37
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-37
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-36
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-36
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-36
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-36
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-35
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-35
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-35
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-34
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-34
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-31
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-31
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-31
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-30
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-30
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-29
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-29
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-29
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-28
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-28
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-26
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-25
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-25
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-24
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-24
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-22
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-21
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-21
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-21
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-21
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-20
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-20
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-19
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-18
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-18
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-17
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-17
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-17
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-10

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (404), Expect = 3e-46
 Identities = 61/330 (18%), Positives = 110/330 (33%), Gaps = 64/330 (19%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDI 150
            +  +S++G G  G V +        ++A K++        R   + E+ VL       I
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66

Query: 151 ---------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHE-LRL 182
                                GG+      +    P  ++ ++   +++ + ++ E  ++
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H D+KP NIL+                 +  G           IKL DFG +       
Sbjct: 127 MHRDVKPSNILV-----------------NSRGE----------IKLCDFGVSGQLIDSM 159

Query: 243 SY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
           +   V TR Y +PE + G  ++   D+WS+G  LVE+  G       +  E   M    +
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                    R           G     P                +LP+ +         +
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL------E 273

Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFFTR 391
             D +   L  +PAER   ++ + H F  R
Sbjct: 274 FQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  149 bits (376), Expect = 5e-42
 Identities = 87/364 (23%), Positives = 142/364 (39%), Gaps = 80/364 (21%)

Query: 86  IGENLTP-RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR 144
            GE     RY ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR
Sbjct: 6   KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 65

Query: 145 LARHDI-------------------------------------------GGTRYRSFPID 161
           +   D                                                +R  P+ 
Sbjct: 66  VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125

Query: 162 LVRELGRQLLESVAFMHELR-LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
            V+++ +QLL  + +MH    +IHTD+KPEN+L+   +                      
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP-------------------- 165

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                 IK+ D G+  +  + ++  + TR YR+PEV+LG  W    D+WS  C++ EL +
Sbjct: 166 -ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 224

Query: 281 GEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
           G+ LF+  E      + +H+A +  +LG LP +++         +  RG   +       
Sbjct: 225 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK---- 280

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 394
                  W L  +     +     A ++ D L  +L+ DP +R  A   + HP+    + 
Sbjct: 281 ----LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 336

Query: 395 RPTL 398
              +
Sbjct: 337 MEEI 340

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (373), Expect = 5e-42
 Identities = 68/339 (20%), Positives = 130/339 (38%), Gaps = 77/339 (22%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N    +   A+ EI +LQ L   +
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70

Query: 150 I-----------------------------------GGTRYRSFPIDLVRELGRQLLESV 174
           +                                          F +  ++ + + LL  +
Sbjct: 71  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 130

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++H  +++H D+K  N+L+     +K+ D+                      +      
Sbjct: 131 YYIHRNKILHRDMKAANVLITRDGVLKLADFGL-------------------ARAFSLAK 171

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
            +  ++  + VV T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q +     
Sbjct: 172 NSQPNRYTNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 230

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
           LA++ ++ G +   +    D           +                    ++ + +  
Sbjct: 231 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR----------------KVKDRLKA 274

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
           +V       +DL+  LL  DPA+R+ + +AL H FF  D
Sbjct: 275 YVRDP--YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (375), Expect = 6e-42
 Identities = 75/336 (22%), Positives = 128/336 (38%), Gaps = 73/336 (21%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA 146
           ++ PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI +L R  
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 147 RHDI-------------------------GGT-----RYRSFPIDLVRELGRQLLESVAF 176
             +I                         G       + +    D +     Q+L  + +
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKY 124

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H   ++H DLKP N+LL +   +K+ D+     +  D  +                   
Sbjct: 125 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH------------------- 165

Query: 237 FEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
                 +  V+TR YRAPE++L   G+    D+WSVGCIL E+ S   +F     L+ L 
Sbjct: 166 --TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 223

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
            +  +LG                        D       +     +    +      +  
Sbjct: 224 HILGILGSPSQE-------------------DLNCIINLKARNYLLSLPHKNKVPWNRLF 264

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
            ++    +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 265 PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 7e-42
 Identities = 79/343 (23%), Positives = 131/343 (38%), Gaps = 89/343 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLARH 148
           +Y  ++++GEG +G+V +  D +     VA+K VR          + + E+ VL+ L   
Sbjct: 8   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67

Query: 149 D------------------------------------IGGTRYRSFPIDLVRELGRQLLE 172
           +                                    +        P + ++++  QLL 
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            + F+H  R++H DLKP+NIL+ S+  +K+ D                            
Sbjct: 128 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD-------------------------FGL 162

Query: 233 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 292
                     + VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   +++
Sbjct: 163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 222

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            L  +  V+G                        DWP       ++       +    I 
Sbjct: 223 QLGKILDVIGLPGEE-------------------DWPRDV----ALPRQAFHSKSAQPIE 259

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
           + V        DLL   L ++PA+R+ A  AL HP+F +D+ R
Sbjct: 260 KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF-QDLER 301

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (365), Expect = 2e-41
 Identities = 65/332 (19%), Positives = 108/332 (32%), Gaps = 109/332 (32%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARH 148
            + I   +G+G FG V    + + K ++A+K++                E+++   L   
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 149 DI---------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELR 181
           +I                      GT      +   F          +L  ++++ H  R
Sbjct: 67  NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 126

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 240
           +IH D+KPEN+LL SA  +K                           + DFG S      
Sbjct: 127 VIHRDIKPENLLLGSAGELK---------------------------IADFGWSVHAPSS 159

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
             + +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + RV
Sbjct: 160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 219

Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
               P                                                  D    
Sbjct: 220 EFTFP--------------------------------------------------DFVTE 229

Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
              DL+  LL+++P++R   RE L HP+ T +
Sbjct: 230 GARDLISRLLKHNPSQRPMLREVLEHPWITAN 261

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (361), Expect = 5e-40
 Identities = 63/341 (18%), Positives = 119/341 (34%), Gaps = 107/341 (31%)

Query: 93  RYRILSKM-GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-- 149
            Y++ S++ G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++    
Sbjct: 12  DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHI 67

Query: 150 --------------------------------IGGTRYRSFPIDLVRELGRQLLESVAFM 177
                                           I     ++F      E+ + + E++ ++
Sbjct: 68  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 127

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H + + H D+KPEN+L  S     +                        +KL DFG    
Sbjct: 128 HSINIAHRDVKPENLLYTSKRPNAI------------------------LKLTDFGFAKE 163

Query: 238 --EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
              H   +    T +Y APEV+    ++  CD+WS+G I+  L  G   F ++  L    
Sbjct: 164 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 223

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
            M+                                        R        PN     V
Sbjct: 224 GMKT---------------------------------------RIRMGQYEFPNPEWSEV 244

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
                ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 245 SE---EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 282

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  142 bits (359), Expect = 7e-40
 Identities = 67/329 (20%), Positives = 136/329 (41%), Gaps = 72/329 (21%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
            Y+++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L       
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGGPNII 93

Query: 150 ---------------------IGGT---RYRSFPIDLVRELGRQLLESVAFMHELRLIHT 185
                                        Y++     +R    ++L+++ + H + ++H 
Sbjct: 94  TLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHR 153

Query: 186 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHS 243
           D+KP N+++                            +   ++LID+G   F H  Q+++
Sbjct: 154 DVKPHNVMIDH--------------------------EHRKLRLIDWGLAEFYHPGQEYN 187

Query: 244 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE-ALFQTHENLEHLAMMERVL 301
             V++R+++ PE+++    ++Y  D+WS+GC+L  +   +   F  H+N + L  + +VL
Sbjct: 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 247

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
           G    +  I              + +        D +    +      +  ++    + +
Sbjct: 248 GTEDLYDYID-------------KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPE 294

Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFFT 390
            +D L  LLRYD   RL AREA+ HP+F 
Sbjct: 295 ALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 2e-39
 Identities = 65/346 (18%), Positives = 119/346 (34%), Gaps = 113/346 (32%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLAR 147
           N    + I+ ++G+G FG+V +  + E   L A K++ + + +  E  M+EID+L     
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-D 67

Query: 148 H-----------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMH 178
           H                              +     R      ++ + +Q L+++ ++H
Sbjct: 68  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 127

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
           + ++IH DLK  NIL                  + DG           IKL DFG +   
Sbjct: 128 DNKIIHRDLKAGNILF-----------------TLDGD----------IKLADFGVSAKN 160

Query: 239 HQDHSY---VVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQTHEN 290
            +        + T ++ APEV++        ++Y  D+WS+G  L+E+   E        
Sbjct: 161 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH---- 216

Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
                                                        + MR + K+ +    
Sbjct: 217 -------------------------------------------ELNPMRVLLKIAKSEPP 233

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            +      + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 234 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 279

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 3e-39
 Identities = 83/374 (22%), Positives = 133/374 (35%), Gaps = 106/374 (28%)

Query: 65  IPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKI 124
           +   G  P RP +                Y     +G G+FG V +    +  ELVAIK 
Sbjct: 7   VATPGQGPDRPQEVS--------------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 52

Query: 125 VRSINKYREAAMIEIDVLQRLARHDI---------------------------------- 150
           V    +++     E+ ++++L   +I                                  
Sbjct: 53  VLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109

Query: 151 --GGTRYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 208
                  ++ P+  V+    QL  S+A++H   + H D+KP+N+LL              
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD------------- 156

Query: 209 SRSSKDGSYFKNLPKSSAIKLIDFGSTTF--EHQDHSYVVSTRHYRAPEVILG-LGWNYP 265
                        P ++ +KL DFGS       + +   + +R+YRAPE+I G   +   
Sbjct: 157 -------------PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 203

Query: 266 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGA 324
            D+WS GC+L EL  G+ +F     ++ L  + +VLG P    +        E  F +  
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263

Query: 325 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 384
              W      R                         + I L   LL Y P  RL   EA 
Sbjct: 264 AHPWTKVFRPRTPP----------------------EAIALCSRLLEYTPTARLTPLEAC 301

Query: 385 RHPFFTRDVRRPTL 398
            H FF  ++R P +
Sbjct: 302 AHSFF-DELRDPNV 314

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  141 bits (356), Expect = 4e-39
 Identities = 70/332 (21%), Positives = 101/332 (30%), Gaps = 104/332 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARH--- 148
            Y I  ++G G FG V    +       A K V + +   +E    EI  +  L RH   
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTL 85

Query: 149 --------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                     +     +     D   E  RQ+ + +  MHE   
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 145

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF--EHQ 240
           +H DLKPENI+  +                          +S+ +KLIDFG T      Q
Sbjct: 146 VHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAHLDPKQ 180

Query: 241 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
                  T  + APEV  G    Y  D+WSVG +   L SG + F    + E L  ++  
Sbjct: 181 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 240

Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
              +                                                        
Sbjct: 241 DWNMDDSAFSGISE---------------------------------------------- 254

Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
           D  D ++ LL  DP  R+   +AL HP+ T  
Sbjct: 255 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 286

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 7e-39
 Identities = 75/334 (22%), Positives = 121/334 (36%), Gaps = 72/334 (21%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           RY+ L  +G G  G V   +D      VAIK +        + + A  E+ +++ +   +
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77

Query: 150 I--------------------------GGTRYRSF----PIDLVRELGRQLLESVAFMHE 179
           I                               +        + +  L  Q+L  +  +H 
Sbjct: 78  IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 137

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             +IH DLKP NI++ S   +K+ D                              T    
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILD-------------------------FGLARTAGTS 172

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
              +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +  
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232

Query: 300 VLGPLPHHMVIRADRRAEKYFR---RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            LG      + +       Y     + A L +P                 L     +H  
Sbjct: 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK-----------LFPDSLFPADSEHNK 281

Query: 357 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
             A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 282 LKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 7e-39
 Identities = 83/337 (24%), Positives = 136/337 (40%), Gaps = 78/337 (23%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
            ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 150 I----------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELR 181
           I                              +     P+ L++    QLL+ +AF H  R
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           ++H DLKP+N+L+ +   +K+ D+                                    
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT------------------------ 158

Query: 242 HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 300
           +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R 
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218

Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG                       + WP   +  D   +  K  R      + V     
Sbjct: 219 LGTPD-------------------EVVWPGVTSMPDYKPSFPKWARQD--FSKVVPPLDE 257

Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
           D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  139 bits (352), Expect = 1e-38
 Identities = 65/336 (19%), Positives = 108/336 (32%), Gaps = 102/336 (30%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDI- 150
            Y IL ++G G FG V  C +     +   K + +     +     EI ++ +L    + 
Sbjct: 30  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 89

Query: 151 --------------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                               GG                 V    RQ  E +  MHE  ++
Sbjct: 90  NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 149

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPENI+                             K+S++K+IDFG  T  + D  
Sbjct: 150 HLDIKPENIMC-------------------------ETKKASSVKIIDFGLATKLNPDEI 184

Query: 244 Y--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
                +T  + APE++      +  D+W++G +   L SG + F   ++LE L  ++R  
Sbjct: 185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD 244

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                                                                      +
Sbjct: 245 WEFDEDAFSSVSP----------------------------------------------E 258

Query: 362 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 397
             D ++ LL+ +P +RL   +AL HP+   D    T
Sbjct: 259 AKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLT 294

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 3e-38
 Identities = 56/339 (16%), Positives = 99/339 (29%), Gaps = 101/339 (29%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 148 HDI---------------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHE 179
            +I                     G                  +     Q+ E++ F+H 
Sbjct: 61  RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
             + H D++PENI+  +     +                         K+I+FG      
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTI-------------------------KIIEFGQARQLK 155

Query: 240 QDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
              ++  + +   Y APEV      +   D+WS+G ++  L SG   F    N + +  +
Sbjct: 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
                                                                       
Sbjct: 216 MNAEYTFDEEAFKEISI------------------------------------------- 232

Query: 358 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
              + +D +  LL  +   R+ A EAL+HP+  + + R 
Sbjct: 233 ---EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERV 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 3e-37
 Identities = 63/334 (18%), Positives = 113/334 (33%), Gaps = 100/334 (29%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHD-- 149
           +Y    K+G+G  G V    D    + VAI+ +       +E  + EI V++   ++   
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNI 79

Query: 150 --------------------IGGT-----RYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                                GG+              +  + R+ L+++ F+H  ++IH
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+K +NILL     VK+ D+ F ++ + + S                          S 
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK------------------------RST 175

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 304
           +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L ++     P 
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP- 234

Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 364
                                L  P+  ++                             D
Sbjct: 235 --------------------ELQNPEKLSA--------------------------IFRD 248

Query: 365 LLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 398
            L   L  D  +R  A+E L+H F        +L
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 4e-37
 Identities = 77/335 (22%), Positives = 127/335 (37%), Gaps = 88/335 (26%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRL---- 145
            L  +GEG F  V +  D    ++VAIK ++  ++          A+ EI +LQ L    
Sbjct: 2   KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 61

Query: 146 -----------------------ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                      I            ++      L+ + ++H+  +
Sbjct: 62  IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 121

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF---EH 239
           +H DLKP N+LL                  ++G           +KL DFG        +
Sbjct: 122 LHRDLKPNNLLL-----------------DENGV----------LKLADFGLAKSFGSPN 154

Query: 240 QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
           + +++ V TR YRAPE++ G   +    D+W+VGCIL EL           +L+ L  + 
Sbjct: 155 RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF 214

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
             LG                         WPD      S+         P + + H+  +
Sbjct: 215 ETLGTPTEE-------------------QWPDMC----SLPDYVTFKSFPGIPLHHIFSA 251

Query: 359 AG-DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
           AG DL+DL+QGL  ++P  R+ A +AL+  +F+  
Sbjct: 252 AGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 286

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 6e-37
 Identities = 78/351 (22%), Positives = 138/351 (39%), Gaps = 84/351 (23%)

Query: 78  KDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KY 131
           + G Y   + +    +   YR L  +G G +G V    D      VAIK +        +
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 132 REAAMIEIDVLQRLARHDIGG-------------------------------TRYRSFPI 160
            + A  E+ +L+ +   ++ G                                ++     
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE 120

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
           D ++ L  Q+L+ + ++H   +IH DLKP N+                            
Sbjct: 121 DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA--------------------------- 153

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELC 279
           + +   +K++DFG       + +  V TR YRAPEVIL  + +    D+WSVGCI+ E+ 
Sbjct: 154 VNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 213

Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           +G+ LF+  ++L+ L  + +V G  P   V R      K + +G     P+         
Sbjct: 214 TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG----LPE--------- 260

Query: 340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 390
                          + +++   ++LL+ +L  D  +R+ A EAL HP+F 
Sbjct: 261 ------LEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 305

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (339), Expect = 1e-36
 Identities = 73/339 (21%), Positives = 135/339 (39%), Gaps = 83/339 (24%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRL 145
            +  RY+ LS +G G +G V   FD +    VA+K +        + +    E+ +L+ +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 146 ARHDI-------------------------------GGTRYRSFPIDLVRELGRQLLESV 174
              ++                                  + +    D V+ L  Q+L  +
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++H   +IH DLKP N+ +                            +   +K++DFG 
Sbjct: 135 KYIHSADIIHRDLKPSNLAV---------------------------NEDCELKILDFGL 167

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                 + +  V+TR YRAPE++L    +N   D+WSVGCI+ EL +G  LF   ++++ 
Sbjct: 168 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
           L ++ R++G     +                        +S  +   +  L ++P +   
Sbjct: 228 LKLILRLVGTPGAEL--------------------LKKISSESARNYIQSLTQMPKMNFA 267

Query: 354 HVDHSAG-DLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
           +V   A    +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 268 NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  132 bits (332), Expect = 2e-36
 Identities = 74/345 (21%), Positives = 110/345 (31%), Gaps = 119/345 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----------SINKYREAAMIEIDVL 142
            Y     +G G    V  C      +  A+KI+            + + REA + E+D+L
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 143 QRLARHDI----------------------GGT------RYRSFPIDLVRELGRQLLESV 174
           ++++ H                         G          +      R++ R LLE +
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
             +H+L ++H DLKPENILL                   D +          IKL DFG 
Sbjct: 124 CALHKLNIVHRDLKPENILL-----------------DDDMN----------IKLTDFGF 156

Query: 235 TTFEHQDHSY--VVSTRHYRAPEVILG------LGWNYPCDLWSVGCILVELCSGEALFQ 286
           +           V  T  Y APE+I         G+    D+WS G I+  L +G   F 
Sbjct: 157 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 216

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
             + +  L M+                      F      D+ D                
Sbjct: 217 HRKQMLMLRMI----------------MSGNYQFGSPEWDDYSD---------------- 244

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 391
                          + DL+   L   P +R  A EAL HPFF +
Sbjct: 245 --------------TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  132 bits (334), Expect = 2e-36
 Identities = 64/347 (18%), Positives = 114/347 (32%), Gaps = 112/347 (32%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
           ++    +  L ++G G+FG V    D    E+VAIK +       N+  +  + E+  LQ
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 144 RLARH----------------------------DIGGTRYRSFPIDLVRELGRQLLESVA 175
           +L RH                            D+     +      +  +    L+ +A
Sbjct: 71  KL-RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 235
           ++H   +IH D+K  NILL                 S+ G           +KL DFGS 
Sbjct: 130 YLHSHNMIHRDVKAGNILL-----------------SEPGL----------VKLGDFGSA 162

Query: 236 TFEHQDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALFQTHENLE 292
           +     +S+ V T ++ APEVIL +    ++   D+WS+G   +EL   +        + 
Sbjct: 163 SIMAPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221

Query: 293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 352
            L  + +   P                        W +                      
Sbjct: 222 ALYHIAQNESPALQSG------------------HWSE---------------------- 241

Query: 353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 399
                      + +   L+  P +R  +   L+H F  R+     ++
Sbjct: 242 --------YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIM 280

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 3e-36
 Identities = 54/333 (16%), Positives = 111/333 (33%), Gaps = 99/333 (29%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDI 150
            + ++  +GEG +G+V    +   +E VA+KIV         E    EI + + L   ++
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65

Query: 151 ---------------------GGTRY------RSFPIDLVRELGRQLLESVAFMHELRLI 183
                                GG  +         P    +    QL+  V ++H + + 
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H D+KPEN+LL   + +K+ D+   +    +                         +  +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNN----------------------RERLLN 163

Query: 244 YVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
            +  T  Y APE++    ++  P D+WS G +L  + +GE                    
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL------------------- 204

Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 362
                                      D  +      + WK  +      + +D      
Sbjct: 205 -------------------------PWDQPSDSCQEYSDWKEKKTYLNPWKKIDS---AP 236

Query: 363 IDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 395
           + LL  +L  +P+ R+   +  +  ++ + +++
Sbjct: 237 LALLHKILVENPSARITIPDIKKDRWYNKPLKK 269

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 1e-35
 Identities = 77/330 (23%), Positives = 128/330 (38%), Gaps = 77/330 (23%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L   +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62

Query: 150 I---------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
           I                             +       ++V+    QLL+ + F H   +
Sbjct: 63  IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           +H DLKP+N+L+     +K+ ++                                  + +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPV------------------------RCY 158

Query: 243 SYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEA-LFQTHENLEHLAMMERV 300
           S  V T  YR P+V+ G    +   D+WS GCI  EL +    LF  ++  + L  + R+
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218

Query: 301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 360
           LG                         WP      D     + +      ++  V     
Sbjct: 219 LGTPTEE-------------------QWPSMTKLPDYKP--YPMYPATTSLVNVVPKLNA 257

Query: 361 DLIDLLQGLLRYDPAERLKAREALRHPFFT 390
              DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 258 TGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  130 bits (327), Expect = 2e-35
 Identities = 72/337 (21%), Positives = 116/337 (34%), Gaps = 101/337 (29%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK +   ++     +   EI VL +
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 63

Query: 145 LARHDI---------------------GGT------RYRSFPIDLVRELGRQLLESVAFM 177
           +   +I                     GG           +       L  Q+L++V ++
Sbjct: 64  IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 123

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
           H+L ++H DLKPEN+L  S                        L + S I + DFG +  
Sbjct: 124 HDLGIVHRDLKPENLLYYS------------------------LDEDSKIMISDFGLSKM 159

Query: 238 EHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 295
           E           T  Y APEV+    ++   D WS+G I   L  G   F    + +   
Sbjct: 160 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--- 216

Query: 296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 355
           + E++L             +AE  F      D  D                         
Sbjct: 217 LFEQIL-------------KAEYEFDSPYWDDISD------------------------- 238

Query: 356 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 392
                   D ++ L+  DP +R    +AL+HP+   D
Sbjct: 239 -----SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 8e-35
 Identities = 63/339 (18%), Positives = 109/339 (32%), Gaps = 107/339 (31%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 141 VLQRLARH----------------------------DIGGTRYRSFPIDLVRELGRQLLE 172
           +L+ + +H                                    S   +   E  +Q+L 
Sbjct: 66  ILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124

Query: 173 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
            V ++H L++ H DLKPENI+L+                               IK+IDF
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLD-----------------------RNVPKPRIKIIDF 161

Query: 233 GSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 290
           G        + +  +  T  + APE++         D+WS+G I   L SG + F     
Sbjct: 162 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 221

Query: 291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 350
            E LA +  V                                                  
Sbjct: 222 QETLANVSAVNYEFED-------------------------------------------- 237

Query: 351 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             ++  +++    D ++ LL  DP +R+  +++L+HP+ 
Sbjct: 238 --EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 1e-34
 Identities = 59/343 (17%), Positives = 119/343 (34%), Gaps = 112/343 (32%)

Query: 85  AIGENLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEID 140
           A+G +   R+ +   ++G G+F  V +  D E    VA   ++        R+    E +
Sbjct: 1   AVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE 60

Query: 141 VLQRLARHDI-------------------------GGT------RYRSFPIDLVRELGRQ 169
           +L+ L   +I                          GT      R++   I ++R   RQ
Sbjct: 61  MLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQ 120

Query: 170 LLESVAFMHEL--RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 227
           +L+ + F+H     +IH DLK +NI +                +   GS          +
Sbjct: 121 ILKGLQFLHTRTPPIIHRDLKCDNIFI----------------TGPTGS----------V 154

Query: 228 KLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 286
           K+ D G  T +    +  V+ T  + APE+     ++   D+++ G  ++E+ + E  + 
Sbjct: 155 KIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS 213

Query: 287 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 346
             +N   +                                            R V   ++
Sbjct: 214 ECQNAAQI-------------------------------------------YRRVTSGVK 230

Query: 347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
             +        +  ++ ++++G +R +  ER   ++ L H FF
Sbjct: 231 PASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  126 bits (318), Expect = 2e-34
 Identities = 75/331 (22%), Positives = 126/331 (38%), Gaps = 83/331 (25%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEGT+G V +  +N  +   A+K +R            + EI +L+ L   +
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 150 I---------------------------GGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
           I                                        +    QLL  +A+ H+ R+
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD- 241
           +H DLKP+N+L+                 +++G           +K+ DFG         
Sbjct: 122 LHRDLKPQNLLI-----------------NREGE----------LKIADFGLARAFGIPV 154

Query: 242 --HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
             +++ + T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + L  + 
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
           R+LG                        +WP+                LP      +   
Sbjct: 215 RILGTPNSK-------------------NWPNVTELPKYDPNFTVYEPLP--WESFLKGL 253

Query: 359 AGDLIDLLQGLLRYDPAERLKAREALRHPFF 389
               IDLL  +L+ DP +R+ A++AL H +F
Sbjct: 254 DESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 2e-31
 Identities = 56/339 (16%), Positives = 103/339 (30%), Gaps = 120/339 (35%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           Y +L  +G G++G+  +       +++  K +         ++  + E+++L+ L   +I
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

Query: 151 -----------------------GGT----------RYRSFPIDLVRELGRQLLESVAFM 177
                                  GG             +    + V  +  QL  ++   
Sbjct: 66  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125

Query: 178 HEL-----RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 232
           H        ++H DLKP N+ L                     +          +KL DF
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFL-----------------DGKQN----------VKLGDF 158

Query: 233 GSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 289
           G     + D S+    V T +Y +PE +  + +N   D+WS+GC+L ELC+    F    
Sbjct: 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 218

Query: 290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 349
             E    +                       R G     P   +                
Sbjct: 219 QKELAGKI-----------------------REGKFRRIPYRYSD--------------- 240

Query: 350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
                      +L +++  +L      R    E L +P 
Sbjct: 241 -----------ELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  118 bits (296), Expect = 5e-31
 Identities = 50/330 (15%), Positives = 93/330 (28%), Gaps = 88/330 (26%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-- 150
           RYR+  K+G G+FG +    D    E VAIK+   +        IE  + + +       
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-VKTKHPQLHIESKIYKMMQGGVGIP 66

Query: 151 -------------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                              G +         R F +  V  L  Q++  + ++H    IH
Sbjct: 67  TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 126

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            D+KP+N L+   +   +           D    K    +              ++++  
Sbjct: 127 RDVKPDNFLMGLGKKGNLVYII-------DFGLAKKYRDAR-------THQHIPYRENKN 172

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 304
           +  T  Y +    LG+  +   DL S+G +L+    G   +Q  +        ER     
Sbjct: 173 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER----- 227

Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 364
                                                    ++   I         +   
Sbjct: 228 -------------------------------------ISEKKMSTPIEVLCKGYPSEFAT 250

Query: 365 LLQGLLRYDPAERLKA---REALRHPFFTR 391
            L         ++      R+  R+ F  +
Sbjct: 251 YLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 7e-31
 Identities = 62/333 (18%), Positives = 103/333 (30%), Gaps = 113/333 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
            + +   +G+G+FG+V      +  +  AIK ++     ++   E  M+E  VL     H
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 149 DI----------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHEL 180
                                   GG           F +        +++  + F+H  
Sbjct: 63  PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 122

Query: 181 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF--- 237
            +++ DLK +NIL                   KDG            K+ DFG       
Sbjct: 123 GIVYRDLKLDNIL-----------------LDKDGHI----------KIADFGMCKENML 155

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 297
                +    T  Y APE++LG  +N+  D WS G +L E+  G++ F   +  E    +
Sbjct: 156 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 215

Query: 298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 357
                                   R     +P                            
Sbjct: 216 ------------------------RMDNPFYPRWLEK----------------------- 228

Query: 358 SAGDLIDLLQGLLRYDPAERLKAR-EALRHPFF 389
              +  DLL  L   +P +RL  R +  +HP F
Sbjct: 229 ---EAKDLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 1e-30
 Identities = 61/334 (18%), Positives = 101/334 (30%), Gaps = 109/334 (32%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
            ++    +GEG+F  VV   +       AIKI+                E DV+ RL   
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 149 DI---------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELR 181
                                   G       +  SF     R    +++ ++ ++H   
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           +IH DLKPENILL    ++++ D+      S +                       +   
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES----------------------KQAR 166

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
            +  V T  Y +PE++         DLW++GCI+ +L +G   F+          + ++ 
Sbjct: 167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 226

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
              P                      +P                                
Sbjct: 227 YDFPEKF-------------------FP-------------------------------K 236

Query: 362 LIDLLQGLLRYDPAERLKAREA------LRHPFF 389
             DL++ LL  D  +RL   E         HPFF
Sbjct: 237 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  116 bits (290), Expect = 7e-30
 Identities = 61/333 (18%), Positives = 103/333 (30%), Gaps = 113/333 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
           ++  +  +G G+FG+V+     E     A+KI+        K  E  + E  +LQ +   
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101

Query: 149 DIGG---------------------------TRYRSFPIDLVRELGRQLLESVAFMHELR 181
            +                              R   F     R    Q++ +  ++H L 
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
           LI+ DLKPEN+L+                  + G           I++ DFG        
Sbjct: 162 LIYRDLKPENLLI-----------------DQQGY----------IQVTDFGFAKRVKGR 194

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
              +  T    APE+IL  G+N   D W++G ++ E+ +G   F   + ++    +    
Sbjct: 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
              P H                      D                               
Sbjct: 255 VRFPSHF-------------------SSD------------------------------- 264

Query: 362 LIDLLQGLLRYDPAERLK-----AREALRHPFF 389
           L DLL+ LL+ D  +R         +   H +F
Sbjct: 265 LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 1e-29
 Identities = 62/343 (18%), Positives = 99/343 (28%), Gaps = 122/343 (35%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRL 145
           +Y++   +G G FG V           VAIK V                  +E+ +L+++
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 146 ARHDIGGTRY------------------------------RSFPIDLVRELGRQLLESVA 175
           +    G  R                                +   +L R    Q+LE+V 
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124

Query: 176 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 234
             H   ++H D+K ENIL+                                +KLIDFG  
Sbjct: 125 HCHNCGVLHRDIKDENILIDL--------------------------NRGELKLIDFGSG 158

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
              +   ++    TR Y  PE I           +WS+G +L ++  G+  F+  E    
Sbjct: 159 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 215

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
                                                             ++R      Q
Sbjct: 216 --------------------------------------------------IIRGQVFFRQ 225

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 396
            V      LI   +  L   P++R    E   HP+  +DV  P
Sbjct: 226 RVSSECQHLI---RWCLALRPSDRPTFEEIQNHPWM-QDVLLP 264

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 3e-29
 Identities = 64/335 (19%), Positives = 108/335 (32%), Gaps = 116/335 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI+R             + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 150 I---------------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRL 182
           +                     GG       R R F  +  R  G +++ ++ ++H   +
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           ++ D+K EN++L                  KDG           IK+ DFG       D 
Sbjct: 127 VYRDIKLENLML-----------------DKDGH----------IKITDFGLCKEGISDG 159

Query: 243 S---YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
           +       T  Y APEV+    +    D W +G ++ E+  G   F   ++     ++  
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                                     + +P   +                          
Sbjct: 220 ------------------------EEIRFPRTLSP------------------------- 230

Query: 360 GDLIDLLQGLLRYDPAERLK-----AREALRHPFF 389
            +   LL GLL+ DP +RL      A+E + H FF
Sbjct: 231 -EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  113 bits (284), Expect = 3e-29
 Identities = 63/332 (18%), Positives = 107/332 (32%), Gaps = 113/332 (34%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRL---- 145
           ++IL  +G G+FG+V            A+K+++       K  E    E  +L  +    
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 146 -----------------------ARHDIGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                          + + FP  + +    ++  ++ ++H   +
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 125

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           I+ DLKPENILL                  K+G           IK+ DFG   +     
Sbjct: 126 IYRDLKPENILL-----------------DKNGH----------IKITDFGFAKYVPDVT 158

Query: 243 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 302
             +  T  Y APEV+    +N   D WS G ++ E+ +G   F     ++     E++L 
Sbjct: 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK---TYEKIL- 214

Query: 303 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 362
                                A L +P                               D+
Sbjct: 215 --------------------NAELRFPPFFNE--------------------------DV 228

Query: 363 IDLLQGLLRYDPAERLK-----AREALRHPFF 389
            DLL  L+  D ++RL        +   HP+F
Sbjct: 229 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  111 bits (279), Expect = 1e-28
 Identities = 44/247 (17%), Positives = 81/247 (32%), Gaps = 61/247 (24%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
            Y++  ++GEG+FG + E  +    + VAIK              E    + LA      
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR-RSDAPQLRDEYRTYKLLAGCTGIP 64

Query: 149 ------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                                   D+     R F +  V    +Q+L  V  +HE  L++
Sbjct: 65  NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG----------S 234
            D+KP+N L+                             ++ I ++DFG           
Sbjct: 125 RDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKFYRDPVTK 162

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
               +++   +  T  Y +    LG   +   DL ++G + +    G   +Q  +   + 
Sbjct: 163 QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK 222

Query: 295 AMMERVL 301
              ER+ 
Sbjct: 223 QKYERIG 229

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  111 bits (278), Expect = 5e-28
 Identities = 64/338 (18%), Positives = 114/338 (33%), Gaps = 115/338 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
            + +   +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 149 DI------------------------GGT------RYRSFPIDLVRELGRQLLESVAFMH 178
           D                         GG       ++  F    +R    +++  +  MH
Sbjct: 65  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 124

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 237
              +++ DLKP NILL    +V                           ++ D G +  F
Sbjct: 125 NRFVVYRDLKPANILLDEHGHV---------------------------RISDLGLACDF 157

Query: 238 EHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 296
             +     V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+  +   +
Sbjct: 158 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 217

Query: 297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
               L                        ++ PD  +                       
Sbjct: 218 DRMTLTM---------------------AVELPDSFSP---------------------- 234

Query: 357 HSAGDLIDLLQGLLRYDPAERLK-----AREALRHPFF 389
               +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 235 ----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 5e-26
 Identities = 48/325 (14%), Positives = 95/325 (29%), Gaps = 110/325 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
             ++L  +G+G FG V+      +   VA+K +++ +   +A + E  V+ +L RH    
Sbjct: 8   ELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKN-DATAQAFLAEASVMTQL-RHSNLV 63

Query: 150 ----------------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELR 181
                                       +          D + +    + E++ ++    
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 123

Query: 182 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 241
            +H DL   N+L+                 S+D             K+ DFG T      
Sbjct: 124 FVHRDLAARNVLV-----------------SEDNV----------AKVSDFGLTKEASST 156

Query: 242 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 301
                    + APE +    ++   D+WS G +L E+ S   +      L+ +       
Sbjct: 157 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------ 210

Query: 302 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 361
                               +G ++D PDG                              
Sbjct: 211 ----------------PRVEKGYKMDAPDGCPP--------------------------A 228

Query: 362 LIDLLQGLLRYDPAERLKAREALRH 386
           + ++++     D A R    +    
Sbjct: 229 VYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  102 bits (254), Expect = 2e-25
 Identities = 54/335 (16%), Positives = 93/335 (27%), Gaps = 102/335 (30%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQR 144
           +L+ RY +   +G G   +V    D      VA+K++R        +      E      
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 145 LARHDI-------------------------GGT------RYRSFPIDLVRELGRQLLES 173
           L    I                         G T                 E+     ++
Sbjct: 64  LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 123

Query: 174 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 233
           + F H+  +IH D+KP NI++ +   VKV D+      +  G+                 
Sbjct: 124 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS---------------- 167

Query: 234 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 293
                    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F     +  
Sbjct: 168 -----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS- 221

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 353
                          V     R +                                    
Sbjct: 222 ---------------VAYQHVREDPIPPSARHEGLSA----------------------- 243

Query: 354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 388
                  DL  ++   L  +P  R +    +R   
Sbjct: 244 -------DLDAVVLKALAKNPENRYQTAAEMRADL 271

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 6e-25
 Identities = 54/329 (16%), Positives = 103/329 (31%), Gaps = 104/329 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
             +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L +H    
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 71

Query: 150 --------------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                     +         I+ + ++  Q+ E +AF+ E   I
Sbjct: 72  RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DL+  NIL+      K+ D+  L+R  +D  Y                          
Sbjct: 132 HRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTA----------------------RE 168

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
                  + APE I    +    D+WS G +L E+ +   +         +         
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-------- 220

Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
                         +   RG R+  PD                              +L 
Sbjct: 221 --------------QNLERGYRMVRPDNCPE--------------------------ELY 240

Query: 364 DLLQGLLRYDPAERLKAREALR--HPFFT 390
            L++   +  P +R            FFT
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-24
 Identities = 52/332 (15%), Positives = 105/332 (31%), Gaps = 112/332 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
           +  +  ++G G+FG V +   +     VA+K++       +  +A   E+ VL++    +
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65

Query: 150 I--------------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHELRL 182
           I                    G +           F +  + ++ RQ  + + ++H   +
Sbjct: 66  ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 242
           IH DLK  NI L                  +D +          +K+ DFG  T + +  
Sbjct: 126 IHRDLKSNNIFL-----------------HEDLT----------VKIGDFGLATVKSRWS 158

Query: 243 SY-----VVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHL 294
                  +  +  + APEVI     N   +  D+++ G +L EL +G+  +         
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--------- 209

Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
                                                  +RD +  +     L   + + 
Sbjct: 210 -----------------------------------SNINNRDQIIFMVGRGYLSPDLSKV 234

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLKAREALRH 386
             +    +  L+   L+    ER    + L  
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 5e-24
 Identities = 58/328 (17%), Positives = 100/328 (30%), Gaps = 102/328 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-- 150
             R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L    +  
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 151 ------------------GGT--------RYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                              G+          +   +  + ++  Q+   +A++  +  +H
Sbjct: 77  LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 136

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DL+  NIL+      KV D+  L+R  +D  Y                           
Sbjct: 137 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTA----------------------RQG 173

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 304
                 + APE  L   +    D+WS G +L EL +   +         +  +++V    
Sbjct: 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQV---- 227

Query: 305 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 364
                            RG R+  P                                L D
Sbjct: 228 ----------------ERGYRMPCPPECPE--------------------------SLHD 245

Query: 365 LLQGLLRYDPAERLKAREALR--HPFFT 390
           L+    R +P ER            +FT
Sbjct: 246 LMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 1e-22
 Identities = 59/326 (18%), Positives = 110/326 (33%), Gaps = 105/326 (32%)

Query: 99  KMGEGTFGQVVECFDNEKK--ELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI--- 150
           ++G G FG V + +   KK  + VA+KI++   +    ++  + E +V+Q+L    I   
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 151 -----------------GGT------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                             G       + R      + EL  Q+   + ++ E   +H DL
Sbjct: 74  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
              N+LLV+  Y K+ D+  LS+                       +    ++  ++   
Sbjct: 134 AARNVLLVTQHYAKISDF-GLSK--------------------ALRADENYYKAQTHGKW 172

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVE-LCSGEALFQTHENLEHLAMMERVLGPLPH 306
              + APE I    ++   D+WS G ++ E    G+  ++  +  E  AM+E        
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------- 224

Query: 307 HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 366
                          +G R+  P G                             ++ DL+
Sbjct: 225 ---------------KGERMGCPAGCPR--------------------------EMYDLM 243

Query: 367 QGLLRYDPAERLKARE---ALRHPFF 389
                YD   R         LR+ ++
Sbjct: 244 NLCWTYDVENRPGFAAVELRLRNYYY 269

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 7e-22
 Identities = 50/323 (15%), Positives = 95/323 (29%), Gaps = 102/323 (31%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
               + ++G G FG V   +    K+ VAIK +R      E  + E +V+ +L  H    
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLV 63

Query: 149 -------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                    D   T+   F  + +  +   + E +A++ E  +I
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DL   N L+   + +KV D+        D                       ++   +
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----------------------QYTSST 160

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
                  + +PEV     ++   D+WS G ++ E+ S   +   + +   +         
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ 214

Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
                              G RL  P  A++                           + 
Sbjct: 215 ----------------ISTGFRLYKPRLAST--------------------------HVY 232

Query: 364 DLLQGLLRYDPAERLKAREALRH 386
            ++    +  P +R      LR 
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLRQ 255

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.8 bits (227), Expect = 1e-21
 Identities = 55/327 (16%), Positives = 90/327 (27%), Gaps = 105/327 (32%)

Query: 93  RYRILSKMGEGTFGQVVECFD---NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLAR 147
           R  +   +GEG FG V +            VAIK  ++   +  RE  + E   +++   
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-D 66

Query: 148 H----------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
           H                                 R  S  +  +     QL  ++A++  
Sbjct: 67  HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
            R +H D+   N+L+ S + VK+ D+  LSR  +D +Y+K                    
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDF-GLSRYMEDSTYYK-------------------- 165

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
              S       + APE I    +    D+W  G  + E+               +     
Sbjct: 166 --ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-- 221

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                                  G RL  P                              
Sbjct: 222 --------------------IENGERLPMPPNCPP------------------------- 236

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRH 386
             L  L+     YDP+ R +  E    
Sbjct: 237 -TLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.2 bits (228), Expect = 2e-21
 Identities = 60/340 (17%), Positives = 112/340 (32%), Gaps = 112/340 (32%)

Query: 93  RYRILSKMGEGTFGQV---VECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQR 144
            + +L  +G G +G+V    +   ++  +L A+K+++        K  E    E  VL+ 
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 145 LARHDI----------------------GGT------RYRSFPIDLVRELGRQLLESVAF 176
           + +                         GG       +   F    V+    +++ ++  
Sbjct: 85  IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 144

Query: 177 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 236
           +H+L +I+ D+K ENILL S  +V + D+                    + + +   +  
Sbjct: 145 LHKLGIIYRDIKLENILLDSNGHVVLTDFGL------------------SKEFVADETER 186

Query: 237 FEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 294
                 +       Y AP+++ G   G +   D WS+G ++ EL +G + F         
Sbjct: 187 AYDFCGTI-----EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 241

Query: 295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 354
           A + R +                          +P   ++                    
Sbjct: 242 AEISRRILKSE--------------------PPYPQEMSA-------------------- 261

Query: 355 VDHSAGDLIDLLQGLLRYDPAERLK-----AREALRHPFF 389
                    DL+Q LL  DP +RL      A E   H FF
Sbjct: 262 ------LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.4 bits (226), Expect = 2e-21
 Identities = 50/337 (14%), Positives = 92/337 (27%), Gaps = 94/337 (27%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI------------- 139
              +   +G+G FG+V       + E VA+KI  S  +       EI             
Sbjct: 4   TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 61

Query: 140 -------------------------DVLQRLARHDIGGTRYRSFPIDLVRELGRQLLESV 174
                                     +   L R+ +         +     L    +E V
Sbjct: 62  FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 121

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
               +  + H DLK +NIL+       + D     R           P            
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH---------- 171

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVELCSGEALFQTH 288
                      V T+ Y APEV+               D++++G +  E+    ++   H
Sbjct: 172 ----------RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
           E+ +          P    M        +    +  R + P+   S +++R         
Sbjct: 222 EDYQLPYYDLVPSDPSVEEM-------RKVVCEQKLRPNIPNRWQSCEALR--------- 265

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 385
                        +  +++     + A RL A    +
Sbjct: 266 ------------VMAKIMRECWYANGAARLTALRIKK 290

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.9 bits (225), Expect = 2e-21
 Identities = 42/327 (12%), Positives = 99/327 (30%), Gaps = 110/327 (33%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
              +  K+G G +G+V E    +    VA+K ++      E  + E  V++ + +H    
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLV 76

Query: 150 ---------------------------IGGTRYRSFPIDLVRELGRQLLESVAFMHELRL 182
                                      +     +     ++  +  Q+  ++ ++ +   
Sbjct: 77  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 136

Query: 183 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD- 241
           IH DL   N L+                  ++            +K+ DFG +     D 
Sbjct: 137 IHRDLAARNCLV-----------------GENHL----------VKVADFGLSRLMTGDT 169

Query: 242 ---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
              H+       + APE +    ++   D+W+ G +L E+ +         +L  +  + 
Sbjct: 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL- 228

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 358
                                  +  R++ P+G                           
Sbjct: 229 ---------------------LEKDYRMERPEGCPE------------------------ 243

Query: 359 AGDLIDLLQGLLRYDPAERLKAREALR 385
              + +L++   +++P++R    E  +
Sbjct: 244 --KVYELMRACWQWNPSDRPSFAEIHQ 268

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.8 bits (222), Expect = 7e-21
 Identities = 59/327 (18%), Positives = 104/327 (31%), Gaps = 105/327 (32%)

Query: 99  KMGEGTFGQVVECFDNEKKE--LVAIKIVR--SINKYREAAMIEIDVLQRLARHDI---- 150
           ++G G FG V +     +K+   VAIK+++  +     E  M E  ++ +L    I    
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 75

Query: 151 ----------------GGT-------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 187
                           GG        +    P+  V EL  Q+   + ++ E   +H DL
Sbjct: 76  GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135

Query: 188 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 247
              N+LLV+  Y K+ D+        D SY                     +   S    
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSY---------------------YTARSAGKW 174

Query: 248 TRHYRAPEVILGLGWNYPCDLWSVGCILVE-LCSGEALFQTHENLEHLAMMERVLGPLPH 306
              + APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E        
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-------- 226

Query: 307 HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 366
                          +G R++ P                               +L  L+
Sbjct: 227 ---------------QGKRMECPPECPP--------------------------ELYALM 245

Query: 367 QGLLRYDPAERLKARE---ALRHPFFT 390
                Y   +R         +R  +++
Sbjct: 246 SDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 1e-20
 Identities = 47/353 (13%), Positives = 92/353 (26%), Gaps = 129/353 (36%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKEL-----VAIKIVR--SINKYREAAMIEIDVLQRL 145
                  +G G FG+V+        +      VA+K+++  + +  REA M E+ ++ +L
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97

Query: 146 ARHD---------------------------------------------------IGGTR 154
             H+                                                        
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
                 + +     Q+ + + F+     +H DL   N+L+   + VK+ D+        D
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 217

Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
            +Y                                 + APE +    +    D+WS G +
Sbjct: 218 SNYVV----------------------RGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL 255

Query: 275 LVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 333
           L E+ S G   +       +                        K  + G ++D P  AT
Sbjct: 256 LWEIFSLGVNPYPGIPVDANF----------------------YKLIQNGFKMDQPFYAT 293

Query: 334 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 386
                                      ++  ++Q    +D  +R         
Sbjct: 294 E--------------------------EIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 3e-20
 Identities = 59/346 (17%), Positives = 101/346 (29%), Gaps = 122/346 (35%)

Query: 93  RYRILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
           R      +G G FG+VVE        ++    VA+K+++  +    REA M E+ VL  L
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 146 ARH----------DIGGTRY------------------------------------RSFP 159
             H           IGG                                        +  
Sbjct: 84  GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143

Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
           ++ +     Q+ + +AF+     IH DL   NILL      K+ D+        D +Y  
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203

Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
                                          + APE I    + +  D+WS G  L EL 
Sbjct: 204 ----------------------KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           S  +       ++                         K  + G R+  P+ A +     
Sbjct: 242 SLGSSPYPGMPVDSKFY---------------------KMIKEGFRMLSPEHAPA----- 275

Query: 340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 385
                                ++ D+++     DP +R   ++ ++
Sbjct: 276 ---------------------EMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 4e-20
 Identities = 43/249 (17%), Positives = 87/249 (34%), Gaps = 58/249 (23%)

Query: 93  RYRILSKMGEGTFGQVVECF---DNEKKELVAIKIVR----SINKYREAAMIEIDVLQRL 145
             R+L K+G+G+FG V        + K   VA+K ++    S  +  +  + E++ +  L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 146 ARH----------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFM 177
             H                            D        F +  +     Q+ E + ++
Sbjct: 69  -DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127

Query: 178 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 237
              R IH DL   N+LL + + VK+ D+  +    ++  +                    
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-------------------- 167

Query: 238 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 296
            +    +      + APE +    +++  D W  G  L E+ + G+  +      + L  
Sbjct: 168 -YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226

Query: 297 MERVLGPLP 305
           +++    LP
Sbjct: 227 IDKEGERLP 235

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 5e-20
 Identities = 50/323 (15%), Positives = 96/323 (29%), Gaps = 104/323 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH----- 148
              L ++G G FG V       + + VAIK+++  +   +  + E  V+  L  H     
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQ 63

Query: 149 ------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLIH 184
                                   +        F    + E+ + + E++ ++   + +H
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123

Query: 185 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 244
            DL   N L+     VKV D+  LSR   D  Y  +                        
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSS----------------------VG 160

Query: 245 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGP 303
                 +  PEV++   ++   D+W+ G ++ E+ S G+  ++   N E    +      
Sbjct: 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI------ 214

Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
                             +G RL  P  A+                            + 
Sbjct: 215 -----------------AQGLRLYRPHLASE--------------------------KVY 231

Query: 364 DLLQGLLRYDPAERLKAREALRH 386
            ++         ER   +  L +
Sbjct: 232 TIMYSCWHEKADERPTFKILLSN 254

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.0 bits (212), Expect = 2e-19
 Identities = 51/296 (17%), Positives = 100/296 (33%), Gaps = 56/296 (18%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFD---NEKKELVAIKIVRS--INKYREAAMIEIDVL 142
           E      +I   +G G FG+V         +++  VAIK ++S    K R   + E  ++
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 143 QRLARHDI---------------------GGT-------RYRSFPIDLVRELGRQLLESV 174
            +    ++                      G+           F +  +  + R +   +
Sbjct: 82  GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 141

Query: 175 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 234
            ++ ++  +H DL   NIL+ S    KV D+  LSR  +D +       +   K+     
Sbjct: 142 KYLADMNYVHRDLAARNILVNSNLVCKVSDFG-LSRFLEDDTSDPTYTSALGGKI----- 195

Query: 235 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH 293
                           + APE I    +    D+WS G ++ E+ S GE  +    N + 
Sbjct: 196 -------------PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD- 241

Query: 294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 349
             ++  +         +       +      + D          +  + K++R PN
Sbjct: 242 --VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPN 295

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 3e-19
 Identities = 49/342 (14%), Positives = 89/342 (26%), Gaps = 121/342 (35%)

Query: 93  RYRILSKMGEGTFGQVVECFDNE--KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARH 148
             +    +GEG FGQV++    +   +   AIK ++             E++VL +L  H
Sbjct: 11  DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 70

Query: 149 --------------------------------------------DIGGTRYRSFPIDLVR 164
                                                        I  +   +     + 
Sbjct: 71  PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 130

Query: 165 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 224
                +   + ++ + + IH DL   NIL+      K+ D+  LSR  +           
Sbjct: 131 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF-GLSRGQEV---------- 179

Query: 225 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 284
                         +   +       + A E +    +    D+WS G +L E+ S    
Sbjct: 180 --------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 225

Query: 285 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 344
                    L                       +   +G RL+ P               
Sbjct: 226 PYCGMTCAELY----------------------EKLPQGYRLEKPLNCDD---------- 253

Query: 345 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 386
                           ++ DL++   R  P ER    + L  
Sbjct: 254 ----------------EVYDLMRQCWREKPYERPSFAQILVS 279

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 5e-19
 Identities = 48/327 (14%), Positives = 92/327 (28%), Gaps = 105/327 (32%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSIN--KYREAAMIEIDVLQRLAR 147
           ++ +  +G G FG V +     + E     VAIK +R     K  +  + E  V+  +  
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-D 69

Query: 148 H----------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHE 179
           +                            D       +     +     Q+ + + ++ +
Sbjct: 70  NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129

Query: 180 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 239
            RL+H DL   N+L+ + ++VK+ D+  L++                             
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFG-LAKLLGAEEK---------------------E 167

Query: 240 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 299
                      + A E IL   + +  D+WS G  + EL +  +          ++    
Sbjct: 168 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---- 223

Query: 300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 359
                                 +G RL  P   T                          
Sbjct: 224 ------------------SILEKGERLPQPPICTI------------------------- 240

Query: 360 GDLIDLLQGLLRYDPAERLKAREALRH 386
            D+  ++      D   R K RE +  
Sbjct: 241 -DVYMIMVKCWMIDADSRPKFRELIIE 266

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 9e-19
 Identities = 44/298 (14%), Positives = 89/298 (29%), Gaps = 57/298 (19%)

Query: 93  RYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLA 146
                  +G G FG+V +        +K+  VAIK ++     K R   + E  ++ + +
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67

Query: 147 RH----------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMH 178
            H                                 +   F +  +  + R +   + ++ 
Sbjct: 68  HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA 127

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
            +  +H DL   NIL+ S    KV D+        D                        
Sbjct: 128 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT----------------- 170

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 298
               S       + APE I    +    D+WS G ++ E+ +         +   +  M+
Sbjct: 171 ----SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV--MK 224

Query: 299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 356
            +         +       +   +  + +        D +  + KL+R P+ +    D
Sbjct: 225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLAD 282

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (207), Expect = 1e-18
 Identities = 47/323 (14%), Positives = 84/323 (26%), Gaps = 104/323 (32%)

Query: 99  KMGEGTFGQVVECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARH----- 148
            +G G FG V        + KK   A+K +  I         + E  +++    H     
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLS 92

Query: 149 -------------------------DIGGTRYRSFPIDLVRELGRQLLESVAFMHELRLI 183
                                    +       +  +  +   G Q+ + + F+   + +
Sbjct: 93  LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 152

Query: 184 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 243
           H DL   N +L     VKV D+  L+R   D  +     K+                   
Sbjct: 153 HRDLAARNCMLDEKFTVKVADF-GLARDMYDKEFDSVHNKTG------------------ 193

Query: 244 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 303
                  + A E +    +    D+WS G +L EL +  A      N   +         
Sbjct: 194 -AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-------- 244

Query: 304 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 363
                          Y  +G RL  P                          ++    L 
Sbjct: 245 --------------VYLLQGRRLLQP--------------------------EYCPDPLY 264

Query: 364 DLLQGLLRYDPAERLKAREALRH 386
           +++          R    E +  
Sbjct: 265 EVMLKCWHPKAEMRPSFSELVSR 287

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.1 bits (199), Expect = 7e-18
 Identities = 53/346 (15%), Positives = 94/346 (27%), Gaps = 121/346 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
           R ++   +G G FGQV+E              VA+K+++  + +    A M E+ +L  +
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 146 ARHDI---------------------------------------------GGTRYRSFPI 160
             H                                                        +
Sbjct: 74  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 133

Query: 161 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 220
           + +     Q+ + + F+   + IH DL   NILL     VK+ D+       KD  Y + 
Sbjct: 134 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR- 192

Query: 221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 280
                                         + APE I    +    D+WS G +L E+ S
Sbjct: 193 ---------------------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 231

Query: 281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 340
             A       ++                         +  + G R+  PD  T       
Sbjct: 232 LGASPYPGVKIDEEFC---------------------RRLKEGTRMRAPDYTTP------ 264

Query: 341 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 386
                               ++   +      +P++R    E + H
Sbjct: 265 --------------------EMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 80.3 bits (197), Expect = 2e-17
 Identities = 50/351 (14%), Positives = 89/351 (25%), Gaps = 128/351 (36%)

Query: 93  RYRILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
               +  +GEG FG+V +         E   +VA+K+++  +    +     E  ++   
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 146 ---------------------------------------------------ARHDIGGTR 154
                                                               R  +    
Sbjct: 74  DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 133

Query: 155 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 214
                      + RQ+   +A++ E + +H DL   N L+     VK+ D+  LSR+   
Sbjct: 134 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADF-GLSRNIYS 192

Query: 215 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 274
             Y+K                               +  PE I    +    D+W+ G +
Sbjct: 193 ADYYKA---------------------DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV 231

Query: 275 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 334
           L E+ S           E +                        Y R G  L  P+    
Sbjct: 232 LWEIFSYGLQPYYGMAHEEVIY----------------------YVRDGNILACPENCPL 269

Query: 335 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 385
                                     +L +L++      PA+R       R
Sbjct: 270 --------------------------ELYNLMRLCWSKLPADRPSFCSIHR 294

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 3e-17
 Identities = 49/347 (14%), Positives = 100/347 (28%), Gaps = 120/347 (34%)

Query: 93  RYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
           +  +  ++G+G+FG V E        +E +  VAIK V   +  + R   + E  V++  
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 146 ARHDI---------------------GGT----------------RYRSFPIDLVRELGR 168
             H +                      G                       +  + ++  
Sbjct: 81  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 140

Query: 169 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 228
           ++ + +A+++  + +H DL   N ++     VK+ D+       +   Y K         
Sbjct: 141 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--------- 191

Query: 229 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 288
                            +    + +PE +    +    D+WS G +L E+ +        
Sbjct: 192 -------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 238

Query: 289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 348
            + E +                       ++   G  LD PD                  
Sbjct: 239 LSNEQVL----------------------RFVMEGGLLDKPDNCPD-------------- 262

Query: 349 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR------HPFF 389
                        L +L++   +Y+P  R    E +        P F
Sbjct: 263 ------------MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 4e-17
 Identities = 46/347 (13%), Positives = 96/347 (27%), Gaps = 123/347 (35%)

Query: 93  RYRILSKMGEGTFGQVVECFD-------NEKKELVAIKIVR--SINKYREAAMIEIDVLQ 143
           R  +   +GEG FGQVV             +   VA+K+++  +  K     + E+++++
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 144 RLARH--------------------------------------------DIGGTRYRSFP 159
            + +H                                            +          
Sbjct: 74  MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133

Query: 160 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 219
              +     Q+   + ++   + IH DL   N+L+     +K+ D+           Y K
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193

Query: 220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 279
                                  +       + APE +    + +  D+WS G +L E+ 
Sbjct: 194 ----------------------TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

Query: 280 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 339
           +          +E L                       K  + G R+D P   T+     
Sbjct: 232 TLGGSPYPGVPVEELF----------------------KLLKEGHRMDKPSNCTN----- 264

Query: 340 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 386
                                +L  +++      P++R   ++ +  
Sbjct: 265 ---------------------ELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 56.3 bits (135), Expect = 5e-10
 Identities = 32/219 (14%), Positives = 58/219 (26%), Gaps = 64/219 (29%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-------------------INKYREA 134
             I   MGEG    V  C+  +  E   +K  +                          +
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 135 AMIEIDVLQRLARHDI----------------GGTRYRSFPIDLVRELGRQLLESVAFMH 178
           A  E   LQ+L    +                         ++   E+   +LE VA  +
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY 120

Query: 179 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 238
              ++H DL   N+L+                                I +IDF  +   
Sbjct: 121 HRGIVHGDLSQYNVLVSEEG----------------------------IWIIDFPQSVEV 152

Query: 239 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 277
            ++    +  R  R         +    D+ S    +++
Sbjct: 153 GEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRILQ 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	405
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.9
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.98
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.82
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.76
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.22
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	94.98
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.9

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-55  Score=398.40  Aligned_cols=224  Identities=27%  Similarity=0.433  Sum_probs=188.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+++.||||++.+.    ....+.+.+|+++++.+.|+|++...             
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4699999999999999999999999999999998643    23456788999999999999985422             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.++                      
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~----------------------  143 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG----------------------  143 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS----------------------
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCC----------------------
Confidence                          24689999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                           .+||+|||+|...... ....+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+..+.+
T Consensus       144 -----~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  218 (263)
T d2j4za1         144 -----ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR  218 (263)
T ss_dssp             -----CEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             -----CEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence                 4677777777554433 2345799999999999999999999999999999999999999998877766655543


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ....+                                                  ++.+++++.+||.+||+.||++|||
T Consensus       219 ~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~dp~~R~t  248 (263)
T d2j4za1         219 VEFTF--------------------------------------------------PDFVTEGARDLISRLLKHNPSQRPM  248 (263)
T ss_dssp             TCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCC--------------------------------------------------CccCCHHHHHHHHHHccCCHhHCcC
Confidence            22111                                                  1235678999999999999999999


Q ss_pred             HHHHHcCCCCCCC
Q 015532          380 AREALRHPFFTRD  392 (405)
Q Consensus       380 a~elL~hp~f~~~  392 (405)
                      ++|+|+||||+.+
T Consensus       249 ~~eil~hp~~~~~  261 (263)
T d2j4za1         249 LREVLEHPWITAN  261 (263)
T ss_dssp             HHHHHTCHHHHHH
T ss_pred             HHHHHcCcCcCCc
Confidence            9999999999754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-54  Score=395.80  Aligned_cols=230  Identities=22%  Similarity=0.371  Sum_probs=181.8

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .++|++.+.||+|+||+||+|+++.+|+.||||+++...  ...+.+.+|+++|++++|+|++...              
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            467999999999999999999999999999999996532  2345688999999999999985421              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++.+++.++.||+.||+|||++||+||||||+|||++.++                       
T Consensus        84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~-----------------------  140 (271)
T d1nvra_          84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----------------------  140 (271)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----------------------
T ss_pred             ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCC-----------------------
Confidence                         24689999999999999999999999999999999999997655                       


Q ss_pred             CCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                          .+||+|||+|+.....     ....+||+.|||||++.+..+ +.++|||||||++|+|++|++||..........
T Consensus       141 ----~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~  216 (271)
T d1nvra_         141 ----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY  216 (271)
T ss_dssp             ----CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH
T ss_pred             ----CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH
Confidence                4677777777643221     234689999999999998876 578999999999999999999997655432222


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      ........                                               .......+++++.+||.+||+.||+
T Consensus       217 ~~~~~~~~-----------------------------------------------~~~~~~~~s~~~~~li~~~L~~dP~  249 (271)
T d1nvra_         217 SDWKEKKT-----------------------------------------------YLNPWKKIDSAPLALLHKILVENPS  249 (271)
T ss_dssp             HHHHTTCT-----------------------------------------------TSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred             HHHhcCCC-----------------------------------------------CCCccccCCHHHHHHHHHHcCCChh
Confidence            11111000                                               0011234577899999999999999


Q ss_pred             CCCCHHHHHcCCCCCCCCC
Q 015532          376 ERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       376 ~Rpta~elL~hp~f~~~~~  394 (405)
                      +|||++|+|+||||++..+
T Consensus       250 ~R~t~~eil~hpwf~~~l~  268 (271)
T d1nvra_         250 ARITIPDIKKDRWYNKPLK  268 (271)
T ss_dssp             TSCCHHHHTTCTTTTCCCC
T ss_pred             HCcCHHHHhcCHhhCcCCC
Confidence            9999999999999997654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-54  Score=397.92  Aligned_cols=229  Identities=26%  Similarity=0.394  Sum_probs=189.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .++|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+|+.++|+|++...               
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            468999999999999999999999999999999996543 3456788999999999999985432               


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++.+++.++.||+.||+|||++||+||||||+|||++.+|                         
T Consensus        99 ~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~-------------------------  153 (293)
T d1yhwa1          99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-------------------------  153 (293)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-------------------------
T ss_pred             cCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCC-------------------------
Confidence                       24589999999999999999999999999999999999997655                         


Q ss_pred             CCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                        .+||+|||++......   ....+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..+...
T Consensus       154 --~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~  231 (293)
T d1yhwa1         154 --SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN  231 (293)
T ss_dssp             --CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH
T ss_pred             --cEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC
Confidence              4677777776544322   23457999999999999999999999999999999999999999988877666554332


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                      ..+.                                               ...+..+++++++||.+||+.||++|||+
T Consensus       232 ~~~~-----------------------------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~  264 (293)
T d1yhwa1         232 GTPE-----------------------------------------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSA  264 (293)
T ss_dssp             CSCC-----------------------------------------------CSSGGGSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCC-----------------------------------------------CCCcccCCHHHHHHHHHHccCChhHCcCH
Confidence            1100                                               01123457789999999999999999999


Q ss_pred             HHHHcCCCCCCCC
Q 015532          381 REALRHPFFTRDV  393 (405)
Q Consensus       381 ~elL~hp~f~~~~  393 (405)
                      +|+|+||||+...
T Consensus       265 ~eil~Hp~~~~~~  277 (293)
T d1yhwa1         265 KELLQHQFLKIAK  277 (293)
T ss_dssp             HHHTTCGGGGGCC
T ss_pred             HHHhcCHhhCCCC
Confidence            9999999997644

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-53  Score=398.14  Aligned_cols=239  Identities=27%  Similarity=0.412  Sum_probs=183.3

Q ss_pred             eCCccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        86 ~~~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      ..+.+.++|++.+.||+|+||+||+|+++.+++.||||++....  .....+.+|+.+|+.++|+|++...         
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~   82 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHL   82 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            35667889999999999999999999999999999999996532  2345577899999999999985421         


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++.++..++.||+.||+|||++||+||||||+|||+...                   
T Consensus        83 ~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~-------------------  143 (307)
T d1a06a_          83 YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL-------------------  143 (307)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-------------------
T ss_pred             EEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc-------------------
Confidence                              2468999999999999999999999999999999999999642                   


Q ss_pred             cccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                           +.+..+||+|||++......  ....+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+....+..
T Consensus       144 -----~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~  218 (307)
T d1a06a_         144 -----DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF  218 (307)
T ss_dssp             -----STTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             -----CCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHH
Confidence                 23456889999988765433  23468999999999999999999999999999999999999999988777666


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.+....++                                              ......+++++.+||.+||+.||
T Consensus       219 ~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~L~~dP  252 (307)
T d1a06a_         219 EQILKAEYEFD----------------------------------------------SPYWDDISDSAKDFIRHLMEKDP  252 (307)
T ss_dssp             HHHHTTCCCCC----------------------------------------------TTTTTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHhccCCCCC----------------------------------------------CccccCCCHHHHHHHHHHccCCH
Confidence            55543221111                                              11123567899999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~  394 (405)
                      ++|||++|+|+||||++...
T Consensus       253 ~~R~s~~eil~hp~~~~~~~  272 (307)
T d1a06a_         253 EKRFTCEQALQHPWIAGDTA  272 (307)
T ss_dssp             GGSCCHHHHHHSTTTTSSCC
T ss_pred             hHCcCHHHHhcCHhhCCCCc
Confidence            99999999999999987543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-53  Score=390.43  Aligned_cols=238  Identities=26%  Similarity=0.411  Sum_probs=197.3

Q ss_pred             CccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-------hhhHHHHHHHHHHHHHhhcCCCCCc------
Q 015532           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTR------  154 (405)
Q Consensus        88 ~~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~il~~l~~~~~~~~~------  154 (405)
                      +.+.++|++.+.||+|+||+||+|+++.+|+.||||++++..       ...+.+.+|+.+|++++|+|++...      
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            446789999999999999999999999999999999996421       2356788999999999999985422      


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||+|||++||+||||||+|||++.++.              
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~--------------  151 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV--------------  151 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSS--------------
T ss_pred             CEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCC--------------
Confidence                                 246899999999999999999999999999999999999976552              


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                               ....+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       152 ---------~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~  222 (293)
T d1jksa_         152 ---------PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ  222 (293)
T ss_dssp             ---------SSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ---------cccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH
Confidence                     2346899999998765433  33468999999999999989999999999999999999999999998887


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +.+..+.+.....+..                                              .....++.+++||.+||+
T Consensus       223 ~~~~~i~~~~~~~~~~----------------------------------------------~~~~~s~~~~~li~~~L~  256 (293)
T d1jksa_         223 ETLANVSAVNYEFEDE----------------------------------------------YFSNTSALAKDFIRRLLV  256 (293)
T ss_dssp             HHHHHHHTTCCCCCHH----------------------------------------------HHTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHhcCCCCCch----------------------------------------------hcCCCCHHHHHHHHHHcc
Confidence            7776665433322221                                              123457789999999999


Q ss_pred             cCCCCCCCHHHHHcCCCCCCCCC
Q 015532          372 YDPAERLKAREALRHPFFTRDVR  394 (405)
Q Consensus       372 ~dP~~Rpta~elL~hp~f~~~~~  394 (405)
                      .||++|||++|+|+||||+....
T Consensus       257 ~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         257 KDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             SSGGGSCCHHHHHHSTTTCC---
T ss_pred             CChhHCcCHHHHhcCcccCCCCh
Confidence            99999999999999999987543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=8.7e-53  Score=399.19  Aligned_cols=233  Identities=29%  Similarity=0.409  Sum_probs=195.9

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++.... ...+.+.+|+++|++++|+|++...              
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE  103 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  103 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            4468999999999999999999999999999999996533 3456788999999999999984321              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++.+++.++.||+.||+|||++|||||||||+|||++.+                       
T Consensus       104 ~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~-----------------------  160 (350)
T d1koaa2         104 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-----------------------  160 (350)
T ss_dssp             CCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-----------------------
T ss_pred             cCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC-----------------------
Confidence                          2458999999999999999999999999999999999999642                       


Q ss_pred             CCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                        .+..+||+|||++.......  ....||+.|||||++.+..|+.++|||||||++|+|++|..||.+.+..+.+..+.
T Consensus       161 --~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~  238 (350)
T d1koaa2         161 --RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK  238 (350)
T ss_dssp             --TSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             --CCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence              23468999999887655433  34689999999999999999999999999999999999999999988887777765


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      .....++.                                              .....+++++++||.+||++||++||
T Consensus       239 ~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~dP~~R~  272 (350)
T d1koaa2         239 SCDWNMDD----------------------------------------------SAFSGISEDGKDFIRKLLLADPNTRM  272 (350)
T ss_dssp             HTCCCSCC----------------------------------------------GGGGGCCHHHHHHHHHHCCSSGGGSC
T ss_pred             hCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccCChhHCc
Confidence            54332221                                              11134577899999999999999999


Q ss_pred             CHHHHHcCCCCCCCC
Q 015532          379 KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ta~elL~hp~f~~~~  393 (405)
                      |++|+|+||||+...
T Consensus       273 t~~eil~hp~~~~~~  287 (350)
T d1koaa2         273 TIHQALEHPWLTPGN  287 (350)
T ss_dssp             CHHHHHHSTTTSCTT
T ss_pred             CHHHHhcCcccCCCC
Confidence            999999999998753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-52  Score=397.30  Aligned_cols=267  Identities=29%  Similarity=0.507  Sum_probs=210.9

Q ss_pred             CCCceEeeCCc---cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCC
Q 015532           79 DGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGG  152 (405)
Q Consensus        79 ~~~~~~~~~~~---~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~  152 (405)
                      .|++...++..   +.++|+++++||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+++|+.+.|++++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~   81 (346)
T d1cm8a_           2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIG   81 (346)
T ss_dssp             CSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCC
T ss_pred             CCcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeE
Confidence            46777777776   789999999999999999999999999999999999743   234567889999999999998854


Q ss_pred             Cc-------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccc
Q 015532          153 TR-------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  201 (405)
Q Consensus       153 ~~-------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k  201 (405)
                      ..                               ...+++..++.++.||+.||+|||++||+||||||+|||++.++   
T Consensus        82 l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~---  158 (346)
T d1cm8a_          82 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC---  158 (346)
T ss_dssp             CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC---
T ss_pred             EEEEeccCccccccceEEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccccc---
Confidence            21                               24689999999999999999999999999999999999997554   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHh
Q 015532          202 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS  280 (405)
Q Consensus       202 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~llt  280 (405)
                                              .+|++|||++.......+..+||+.|+|||++.+. .++.++||||+||++|+|++
T Consensus       159 ------------------------~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~  214 (346)
T d1cm8a_         159 ------------------------ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT  214 (346)
T ss_dssp             ------------------------CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHH
T ss_pred             ------------------------ccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHH
Confidence                                    56778888887776666677899999999999875 56899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc-hhhhhhcccCch
Q 015532          281 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL-PNLIMQHVDHSA  359 (405)
Q Consensus       281 g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  359 (405)
                      |.+||.+.+..+.+..+....+.+|..+..............                    ..... ...........+
T Consensus       215 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~s  274 (346)
T d1cm8a_         215 GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK--------------------GLPELEKKDFASILTNAS  274 (346)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHH--------------------HSCCCCCCCGGGTCTTCC
T ss_pred             CcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhc--------------------cCCcccccchHHhccCCC
Confidence            999999999999999999999999987654432221111110                    00000 011112234567


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          360 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       360 ~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +.++|||.+||++||++||||+|+|+||||++-
T Consensus       275 ~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         275 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence            899999999999999999999999999999863

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-53  Score=392.31  Aligned_cols=231  Identities=26%  Similarity=0.475  Sum_probs=189.1

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch-hhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      +.|++++.||+|+||+||+|+++.+++.||||+++.. ....+.+.+|+++|++++|+|++...                
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4699999999999999999999999999999999653 34456788999999999999985422                


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++.+++.++.||+.||.|||++||+||||||+|||++.+|                        
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~------------------------  147 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG------------------------  147 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS------------------------
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCC------------------------
Confidence                        24589999999999999999999999999999999999997654                        


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHh-----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  294 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~  294 (405)
                         .+||+|||+|......   ....+||+.|+|||++.     +..|+.++|||||||++|+|++|++||.+.+..+.+
T Consensus       148 ---~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~  224 (288)
T d2jfla1         148 ---DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL  224 (288)
T ss_dssp             ---CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH
T ss_pred             ---CEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHH
Confidence               5677888877544322   23468999999999985     446899999999999999999999999988776666


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+.+...+.                                               ...+..+++++.+||.+||+.||
T Consensus       225 ~~i~~~~~~~-----------------------------------------------~~~~~~~s~~~~~li~~~L~~dp  257 (288)
T d2jfla1         225 LKIAKSEPPT-----------------------------------------------LAQPSRWSSNFKDFLKKCLEKNV  257 (288)
T ss_dssp             HHHHHSCCCC-----------------------------------------------CSSGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHcCCCCC-----------------------------------------------CCccccCCHHHHHHHHHHccCCh
Confidence            5554321100                                               01123457789999999999999


Q ss_pred             CCCCCHHHHHcCCCCCCCCCCC
Q 015532          375 AERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       375 ~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ++|||++|+|+||||+.....|
T Consensus       258 ~~R~t~~ell~hp~~~~~~~~p  279 (288)
T d2jfla1         258 DARWTTSQLLQHPFVTVDSNKP  279 (288)
T ss_dssp             TTSCCHHHHTTSGGGCCCCCHH
T ss_pred             hHCcCHHHHhcCcccCCCCCCC
Confidence            9999999999999998765543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.8e-53  Score=401.17  Aligned_cols=224  Identities=26%  Similarity=0.395  Sum_probs=192.2

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+..    ...+.+.+|+.+|+.+.|++++...             
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            57999999999999999999999999999999996432    3346788999999999999985432             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||.|||++|||||||||+|||++.+|                      
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g----------------------  178 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----------------------  178 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS----------------------
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCC----------------------
Confidence                          24689999999999999999999999999999999999997554                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||+|+.........+||+.|||||++.+..|+.++|||||||++|+|++|..||.+.+....+..+...
T Consensus       179 -----~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~  253 (350)
T d1rdqe_         179 -----YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG  253 (350)
T ss_dssp             -----CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             -----CEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC
Confidence                 578888888877766666679999999999999999999999999999999999999999988877766665443


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC--
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL--  378 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp--  378 (405)
                      ....                                                  +..+++++.+||.+||+.||++|+  
T Consensus       254 ~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~dP~kR~~~  283 (350)
T d1rdqe_         254 KVRF--------------------------------------------------PSHFSSDLKDLLRNLLQVDLTKRFGN  283 (350)
T ss_dssp             CCCC--------------------------------------------------CTTCCHHHHHHHHHHSCSCTTTCTTS
T ss_pred             CCCC--------------------------------------------------CccCCHHHHHHHHHHhhhCHHhcccc
Confidence            2211                                                  124577899999999999999995  


Q ss_pred             ---CHHHHHcCCCCCCC
Q 015532          379 ---KAREALRHPFFTRD  392 (405)
Q Consensus       379 ---ta~elL~hp~f~~~  392 (405)
                         |++|+++||||++.
T Consensus       284 ~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         284 LKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             STTTTHHHHTSGGGTTC
T ss_pred             ccccHHHHHcCccccCC
Confidence               99999999999875

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.2e-52  Score=396.73  Aligned_cols=233  Identities=27%  Similarity=0.439  Sum_probs=196.2

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+|+++.|+|++...               
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            467999999999999999999999999999999996543 3345678899999999999984321               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++.+++.++.||+.||.|||++|||||||||+|||++..                        
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~------------------------  163 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK------------------------  163 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST------------------------
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc------------------------
Confidence                         2358999999999999999999999999999999999999632                        


Q ss_pred             CCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  299 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~  299 (405)
                       .++.+||+|||+|.......  ....||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..+.+..+.+
T Consensus       164 -~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~  242 (352)
T d1koba_         164 -KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR  242 (352)
T ss_dssp             -TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH
T ss_pred             -CCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence             23468999999987665433  346899999999999999999999999999999999999999999888887777665


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      ....+|.                                              .....+++++.+||.+||++||++|||
T Consensus       243 ~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~dp~~R~s  276 (352)
T d1koba_         243 CDWEFDE----------------------------------------------DAFSSVSPEAKDFIKNLLQKEPRKRLT  276 (352)
T ss_dssp             CCCCCCS----------------------------------------------STTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccCChhHCcC
Confidence            4333221                                              112345789999999999999999999


Q ss_pred             HHHHHcCCCCCCCCC
Q 015532          380 AREALRHPFFTRDVR  394 (405)
Q Consensus       380 a~elL~hp~f~~~~~  394 (405)
                      ++|+|+||||++...
T Consensus       277 ~~eil~Hp~~~~~~~  291 (352)
T d1koba_         277 VHDALEHPWLKGDHS  291 (352)
T ss_dssp             HHHHHTSTTTSSCCT
T ss_pred             HHHHhcCHhhCCCcc
Confidence            999999999987543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-53  Score=389.96  Aligned_cols=225  Identities=27%  Similarity=0.394  Sum_probs=185.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+++.||||++++..    ...+.+.+|+++|++++|++++...             
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            46999999999999999999999999999999996432    3346688999999999999985422             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    .+.+++..++.++.||+.||+|||++|||||||||+|||++.+|                      
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~----------------------  145 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM----------------------  145 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS----------------------
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCc----------------------
Confidence                          24689999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                           .+||+|||+|+.....     ....+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..+.+.
T Consensus       146 -----~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~  220 (288)
T d1uu3a_         146 -----HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ  220 (288)
T ss_dssp             -----CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             -----eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHH
Confidence                 4667777776544321     123579999999999999999999999999999999999999999887777666


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      .+.+....+                                                  +..+++++++||.+||+.||+
T Consensus       221 ~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~dP~  250 (288)
T d1uu3a_         221 KIIKLEYDF--------------------------------------------------PEKFFPKARDLVEKLLVLDAT  250 (288)
T ss_dssp             HHHTTCCCC--------------------------------------------------CTTCCHHHHHHHHTTSCSSGG
T ss_pred             HHHcCCCCC--------------------------------------------------CccCCHHHHHHHHHHccCCHh
Confidence            554321111                                                  124577899999999999999


Q ss_pred             CCCCHHH------HHcCCCCCCCC
Q 015532          376 ERLKARE------ALRHPFFTRDV  393 (405)
Q Consensus       376 ~Rpta~e------lL~hp~f~~~~  393 (405)
                      +|||++|      +++||||++-.
T Consensus       251 ~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         251 KRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             GSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             HCcCHHHHcCCHHHHcCCccCCCC
Confidence            9999988      68999998753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-52  Score=390.68  Aligned_cols=252  Identities=31%  Similarity=0.498  Sum_probs=194.6

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCC-CcEEEEEEecch---hhhhHHHHHHHHHHHHH---hhcCCCCCc---------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSI---NKYREAAMIEIDVLQRL---ARHDIGGTR---------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~-~~~vAiK~~~~~---~~~~~~~~~E~~il~~l---~~~~~~~~~---------  154 (405)
                      .++|+++++||+|+||+||+|++..+ ++.||||+++..   ......+.+|+++|+.|   .|+++....         
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999999765 678999998642   22234567888888877   588874321         


Q ss_pred             ------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 ------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 ------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                              ...+++..++.++.||+.||+|||++|||||||||+|||++..+.           
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~-----------  154 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ-----------  154 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC-----------
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCC-----------
Confidence                                    235788999999999999999999999999999999999976654           


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  288 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~  288 (405)
                                      +||+|||++.....  ......||+.|+|||++.+..|+.++|||||||++|||++|++||.+.
T Consensus       155 ----------------~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~  218 (305)
T d1blxa_         155 ----------------IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS  218 (305)
T ss_dssp             ----------------EEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ----------------eeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCC
Confidence                            56666666544322  223468999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHH
Q 015532          289 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  368 (405)
Q Consensus       289 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  368 (405)
                      +..+.+..+.+..+.++....                   +.........    ................++.+++||.+
T Consensus       219 ~~~~~~~~i~~~~~~~~~~~~-------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~s~~~~dli~~  275 (305)
T d1blxa_         219 SDVDQLGKILDVIGLPGEEDW-------------------PRDVALPRQA----FHSKSAQPIEKFVTDIDELGKDLLLK  275 (305)
T ss_dssp             SHHHHHHHHHHHHCCCCGGGS-------------------CTTCSSCGGG----SCCCCCCCGGGTCCSCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhCCCchhcc-------------------cccccchhhh----hccccccchhhccccCCHHHHHHHHH
Confidence            999999999998887654321                   1111000000    00001111223345678899999999


Q ss_pred             ccccCCCCCCCHHHHHcCCCCCCC
Q 015532          369 LLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       369 ~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ||++||++||||+|+|+||||++-
T Consensus       276 mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         276 CLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             HSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HCcCChhHCcCHHHHhcChhhcCc
Confidence            999999999999999999999863

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-52  Score=392.34  Aligned_cols=224  Identities=26%  Similarity=0.384  Sum_probs=191.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.|++++.||+|+||+||+|+++.+|+.||||++++.    ....+.+.+|+.+|+.+.|++++...             
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4599999999999999999999999999999999643    23356788999999999999985422             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++||+||||||+|||++.+|                      
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g----------------------  141 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG----------------------  141 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS----------------------
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCC----------------------
Confidence                          24568889999999999999999999999999999999997654                      


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~~~  300 (405)
                           .+||+|||+|+.........+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+....+.+.
T Consensus       142 -----~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~  216 (316)
T d1fota_         142 -----HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA  216 (316)
T ss_dssp             -----CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC
T ss_pred             -----CEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC
Confidence                 578888888877766666789999999999999999999999999999999999999999998877776665442


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC--
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL--  378 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp--  378 (405)
                      ....|                                                  ..+++++.++|.+||+.||++|+  
T Consensus       217 ~~~~p--------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~~~  246 (316)
T d1fota_         217 ELRFP--------------------------------------------------PFFNEDVKDLLSRLITRDLSQRLGN  246 (316)
T ss_dssp             CCCCC--------------------------------------------------TTSCHHHHHHHHHHTCSCTTTCTTS
T ss_pred             CCCCC--------------------------------------------------CCCCHHHHHHHHHHhhhCHHhcccc
Confidence            22111                                                  23467899999999999999996  


Q ss_pred             ---CHHHHHcCCCCCCC
Q 015532          379 ---KAREALRHPFFTRD  392 (405)
Q Consensus       379 ---ta~elL~hp~f~~~  392 (405)
                         |++++|+||||++-
T Consensus       247 ~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         247 LQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             STTTTHHHHTSGGGSSC
T ss_pred             chhhHHHHHcCcccccC
Confidence               99999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-52  Score=383.28  Aligned_cols=227  Identities=23%  Similarity=0.419  Sum_probs=181.1

Q ss_pred             ccCCCe-EEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           89 NLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y-~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ...+|| ++.++||+|+||+||+|++..+++.||+|++...   ....+.+.+|+++|++++|+|++...          
T Consensus         5 ~~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   84 (270)
T d1t4ha_           5 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK   84 (270)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred             CCCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccC
Confidence            344566 6778999999999999999999999999998643   23456688999999999999985421          


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                           ...+++.+++.++.||+.||+|||++|  |+||||||+|||++.               
T Consensus        85 ~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~---------------  149 (270)
T d1t4ha_          85 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG---------------  149 (270)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS---------------
T ss_pred             CEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC---------------
Confidence                                 135788999999999999999999998  999999999999953               


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                 .+..+||+|||+++..... ....+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+..+
T Consensus       150 -----------~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~  217 (270)
T d1t4ha_         150 -----------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN  217 (270)
T ss_dssp             -----------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred             -----------CCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc
Confidence                       2335778888887654433 334689999999999876 699999999999999999999999987655


Q ss_pred             HHHHHH-HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          291 LEHLAM-MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       291 ~~~~~~-i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ...+.. +..  +..|.                                              ......++++.+||.+|
T Consensus       218 ~~~~~~~i~~--~~~~~----------------------------------------------~~~~~~~~~~~~li~~~  249 (270)
T d1t4ha_         218 AAQIYRRVTS--GVKPA----------------------------------------------SFDKVAIPEVKEIIEGC  249 (270)
T ss_dssp             HHHHHHHHTT--TCCCG----------------------------------------------GGGGCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHc--CCCCc----------------------------------------------ccCccCCHHHHHHHHHH
Confidence            443322 211  11111                                              11123467899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFT  390 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~  390 (405)
                      |+.||++|||++|+|+||||+
T Consensus       250 l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         250 IRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGC
T ss_pred             ccCCHhHCcCHHHHhCCcccC
Confidence            999999999999999999996

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-53  Score=399.81  Aligned_cols=270  Identities=22%  Similarity=0.299  Sum_probs=185.6

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      ..++|+++++||+|+||+||+|+++.+|+.||||+++..  ....+.+.+|+.+|+.++|+|++...             
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            357899999999999999999999999999999999643  34456788999999999999985432             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                    ...+++..++.++.||+.||.|||+ +||+||||||+|||++.+|                     
T Consensus        84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~---------------------  142 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG---------------------  142 (322)
T ss_dssp             ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC---------------------
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCC---------------------
Confidence                          2468999999999999999999997 5999999999999997654                     


Q ss_pred             CCCCCCCceeccCCCCccccC-CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH-LAMM  297 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~-~~~i  297 (405)
                            .+||+|||+|..... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+..+. ...+
T Consensus       143 ------~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~  216 (322)
T d1s9ja_         143 ------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG  216 (322)
T ss_dssp             ------CEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-
T ss_pred             ------CEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence                  577888887765432 23446899999999999999999999999999999999999999987654332 2222


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ....+.......... .........  .................... ..+   .......+.+++|||.+||++||++|
T Consensus       217 ~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~s~~~~dli~~~L~~dP~~R  289 (322)
T d1s9ja_         217 CQVEGDAAETPPRPR-TPGRPLSSY--GMDSRPPMAIFELLDYIVNE-PPP---KLPSGVFSLEFQDFVNKCLIKNPAER  289 (322)
T ss_dssp             --------------------------------CCCCHHHHHHHHHTS-CCC---CCCBTTBCHHHHHHHHHHTCSSTTTS
T ss_pred             HHhcCCcccCCcccc-ccccccccc--ccccccchhHHHHHhhhhcc-CCc---cCccccCCHHHHHHHHHHcCCChhHC
Confidence            222222111100000 000000000  00000000000011110000 000   00112357899999999999999999


Q ss_pred             CCHHHHHcCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDV  393 (405)
Q Consensus       378 pta~elL~hp~f~~~~  393 (405)
                      |||+|+|+||||++..
T Consensus       290 ~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         290 ADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             CCHHHHHTSHHHHHHH
T ss_pred             cCHHHHhhCHhhCcCC
Confidence            9999999999998643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-52  Score=391.96  Aligned_cols=228  Identities=25%  Similarity=0.370  Sum_probs=186.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ..+|+++++||+|+||+||+|++..+++.||||+++...    ...+.+.+|+++|++++|+|++...            
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            346999999999999999999999999999999996432    3345688999999999999985432            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++.+++.++.||+.||.|||++|||||||||+|||++.++                     
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~---------------------  152 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG---------------------  152 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT---------------------
T ss_pred             EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCC---------------------
Confidence                           24689999999999999999999999999999999999998765                     


Q ss_pred             CCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                            .+||+|||+|...... ...+||+.|||||++.+   ..|+.++|||||||++|||++|..||.+.+..+.+..
T Consensus       153 ------~~Kl~DFG~a~~~~~~-~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~  225 (309)
T d1u5ra_         153 ------LVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  225 (309)
T ss_dssp             ------EEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             ------CEEEeecccccccCCC-CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence                  4566677766654332 34589999999999975   3589999999999999999999999998877766655


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+...+.+                                                ....+++++.+||.+||+.||++
T Consensus       226 i~~~~~~~~------------------------------------------------~~~~~s~~~~~li~~~L~~dP~~  257 (309)
T d1u5ra_         226 IAQNESPAL------------------------------------------------QSGHWSEYFRNFVDSCLQKIPQD  257 (309)
T ss_dssp             HHHSCCCCC------------------------------------------------SCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHhCCCCCC------------------------------------------------CCCCCCHHHHHHHHHHCcCChhH
Confidence            543211100                                                01235678999999999999999


Q ss_pred             CCCHHHHHcCCCCCCCCC
Q 015532          377 RLKAREALRHPFFTRDVR  394 (405)
Q Consensus       377 Rpta~elL~hp~f~~~~~  394 (405)
                      |||++|+|+||||++...
T Consensus       258 Rpt~~ell~Hp~~~~~~~  275 (309)
T d1u5ra_         258 RPTSEVLLKHRFVLRERP  275 (309)
T ss_dssp             SCCHHHHTTCHHHHSCCC
T ss_pred             CcCHHHHHhCHHhcCCCC
Confidence            999999999999987543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-52  Score=392.87  Aligned_cols=224  Identities=25%  Similarity=0.404  Sum_probs=187.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.|++++.||+|+||+||+|+++.+|+.||||++++.    ....+.+.+|+.+|+.+.|++++...             
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5699999999999999999999999999999999753    22456688999999999999985422             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++|||||||||+|||++.+|                      
T Consensus        85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g----------------------  142 (337)
T d1o6la_          85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG----------------------  142 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS----------------------
T ss_pred             eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCC----------------------
Confidence                          24689999999999999999999999999999999999997665                      


Q ss_pred             CCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           .+||+|||+|+....   .....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+....+
T Consensus       143 -----~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i  217 (337)
T d1o6la_         143 -----HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI  217 (337)
T ss_dssp             -----CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             -----CEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHH
Confidence                 466667776654322   223468999999999999999999999999999999999999999998877666555


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ......+                                                  +..+++++++||.+||++||++|
T Consensus       218 ~~~~~~~--------------------------------------------------p~~~s~~~~dli~~~L~~dP~~R  247 (337)
T d1o6la_         218 LMEEIRF--------------------------------------------------PRTLSPEAKSLLAGLLKKDPKQR  247 (337)
T ss_dssp             HHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             hcCCCCC--------------------------------------------------CccCCHHHHHHHHhhccCCchhh
Confidence            4322111                                                  23457789999999999999999


Q ss_pred             C-----CHHHHHcCCCCCCC
Q 015532          378 L-----KAREALRHPFFTRD  392 (405)
Q Consensus       378 p-----ta~elL~hp~f~~~  392 (405)
                      +     +++|+++||||++-
T Consensus       248 ~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         248 LGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TTCSTTTHHHHHTSGGGTTC
T ss_pred             cccccccHHHHHcCcccccC
Confidence            9     49999999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-52  Score=382.65  Aligned_cols=222  Identities=22%  Similarity=0.378  Sum_probs=173.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      +.|++++.||+|+||+||+|+++.+|+.||||+++...   ...+.+.+|+++|++++|+|++...              
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            46999999999999999999999999999999996532   3346678999999999999985421              


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCC-----cEecCCCCCcEEEecccccccCCcccccc
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELR-----LIHTDLKPENILLVSAEYVKVPDYKFLSR  210 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDlkp~NIli~~~~~~k~~df~~~~~  210 (405)
                                         ...+++..++.++.||+.||+|||++|     ||||||||+|||++.++.+||+||     
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DF-----  158 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF-----  158 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCH-----
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeec-----
Confidence                               134789999999999999999999876     999999999999987665555555     


Q ss_pred             CCCCCCcccCCCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          211 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       211 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                            |+++.....   ....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+
T Consensus       159 ----------------------G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~  216 (269)
T d2java1         159 ----------------------GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA  216 (269)
T ss_dssp             ----------------------HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ----------------------cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCC
Confidence                                  444432221   1235899999999999999999999999999999999999999998


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .+..+....+....  .+                                               ..+..+++++.+||.
T Consensus       217 ~~~~~~~~~i~~~~--~~-----------------------------------------------~~~~~~s~~l~~li~  247 (269)
T d2java1         217 FSQKELAGKIREGK--FR-----------------------------------------------RIPYRYSDELNEIIT  247 (269)
T ss_dssp             SSHHHHHHHHHHTC--CC-----------------------------------------------CCCTTSCHHHHHHHH
T ss_pred             CCHHHHHHHHHcCC--CC-----------------------------------------------CCCcccCHHHHHHHH
Confidence            87766665543311  00                                               011345778999999


Q ss_pred             HccccCCCCCCCHHHHHcCCCC
Q 015532          368 GLLRYDPAERLKAREALRHPFF  389 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~hp~f  389 (405)
                      +||+.||++|||++|+|+|||+
T Consensus       248 ~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         248 RMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHcCCChhHCcCHHHHHhCCcC
Confidence            9999999999999999999996

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-52  Score=388.55  Aligned_cols=234  Identities=24%  Similarity=0.376  Sum_probs=199.1

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .+.++|++.+.||+|+||+||+|+++.+++.||||+++........+.+|+++|+.++|+|++...              
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            356889999999999999999999999999999999987666667788999999999999984321              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++.+++.++.||+.||+|||++||+||||||+|||++.++                      
T Consensus        82 ~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~----------------------  139 (321)
T d1tkia_          82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR----------------------  139 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS----------------------
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCC----------------------
Confidence                          13589999999999999999999999999999999999996532                      


Q ss_pred             CCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                         ...+||+|||++.......  ....||+.|+|||.+.+..|+.++|||||||++|+|++|..||.+.+..+.+..+.
T Consensus       140 ---~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~  216 (321)
T d1tkia_         140 ---SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM  216 (321)
T ss_dssp             ---CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             ---ceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence               3468899999987654433  34689999999999999999999999999999999999999999988888777776


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +....+|...                                              +..+++++++||.+||+.||++||
T Consensus       217 ~~~~~~~~~~----------------------------------------------~~~~s~~~~~li~~~L~~dp~~R~  250 (321)
T d1tkia_         217 NAEYTFDEEA----------------------------------------------FKEISIEAMDFVDRLLVKERKSRM  250 (321)
T ss_dssp             HTCCCCCHHH----------------------------------------------HTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             hCCCCCChhh----------------------------------------------ccCCCHHHHHHHHHHccCChhHCc
Confidence            5433333221                                              234577899999999999999999


Q ss_pred             CHHHHHcCCCCCCCC
Q 015532          379 KAREALRHPFFTRDV  393 (405)
Q Consensus       379 ta~elL~hp~f~~~~  393 (405)
                      |++|+|+||||++..
T Consensus       251 s~~eil~hp~~~~~~  265 (321)
T d1tkia_         251 TASEALQHPWLKQKI  265 (321)
T ss_dssp             CHHHHHHSHHHHSCG
T ss_pred             CHHHHhcCHhhccCc
Confidence            999999999998653

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-52  Score=388.17  Aligned_cols=248  Identities=29%  Similarity=0.452  Sum_probs=189.1

Q ss_pred             EEeeeecccceeEEEEEecCCCcEEEEEEecchhh------hhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        96 ~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      .+++||+|+||+||+|+++.+|+.||||+++....      ..+.+.+|+++|+.++|++++...               
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            56899999999999999999999999999864322      234578999999999999985421               


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..++.++.||+.||+|||++||+||||||+|||++.++.                       
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~-----------------------  138 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV-----------------------  138 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC-----------------------
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCc-----------------------
Confidence                        245889999999999999999999999999999999999987664                       


Q ss_pred             CCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  298 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i~  298 (405)
                          +||+|||++......   ....+||+.|+|||++.+. .|+.++|||||||++|||++|.+||.+.++.+++..|.
T Consensus       139 ----~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~  214 (299)
T d1ua2a_         139 ----LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF  214 (299)
T ss_dssp             ----EEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             ----cccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHH
Confidence                455555555433221   2235799999999999755 58999999999999999999999999999999999999


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccch-hhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      +.+|.++........           ........            ...+ ..........++++++||.+||++||++|
T Consensus       215 ~~~~~~~~~~~~~~~-----------~~~~~~~~------------~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R  271 (299)
T d1ua2a_         215 ETLGTPTEEQWPDMC-----------SLPDYVTF------------KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCAR  271 (299)
T ss_dssp             HHHCCCCTTTSSSTT-----------SSTTCCCC------------CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTS
T ss_pred             HhcCCCChhhccchh-----------ccchhhhh------------ccCCCCChHHhcccCCHHHHHHHHHHccCChhhC
Confidence            988876643211000           00000000            0000 01112234567899999999999999999


Q ss_pred             CCHHHHHcCCCCCCCC
Q 015532          378 LKAREALRHPFFTRDV  393 (405)
Q Consensus       378 pta~elL~hp~f~~~~  393 (405)
                      |||+|+|+||||++..
T Consensus       272 ~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         272 ITATQALKMKYFSNRP  287 (299)
T ss_dssp             CCHHHHHTSGGGTSSS
T ss_pred             cCHHHHhCCHhhCCCC
Confidence            9999999999998753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-51  Score=388.03  Aligned_cols=278  Identities=27%  Similarity=0.409  Sum_probs=207.4

Q ss_pred             CCceEeeCCc---cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCC
Q 015532           80 GHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT  153 (405)
Q Consensus        80 ~~~~~~~~~~---~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~  153 (405)
                      .+|++.+|+.   +.++|+++++||+|+||+||+|+++.+|+.||||+++..   ......+.+|+.+|+++.|++++..
T Consensus         2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~   81 (355)
T d2b1pa1           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL   81 (355)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             CCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEE
Confidence            5788999993   448999999999999999999999999999999999653   2334567899999999999998542


Q ss_pred             c------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          154 R------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       154 ~------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                      .                              ...+++..++.++.||+.||.|||++||+||||||+|||++.++.    
T Consensus        82 ~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~----  157 (355)
T d2b1pa1          82 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----  157 (355)
T ss_dssp             SEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC----
T ss_pred             EEEEecccccccCceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccc----
Confidence            1                              246789999999999999999999999999999999999977654    


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccC--CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                                             ++++|||.+.....  .....+||+.|+|||++.+..++.++||||+||++|+|++|
T Consensus       158 -----------------------~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g  214 (355)
T d2b1pa1         158 -----------------------LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH  214 (355)
T ss_dssp             -----------------------EEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             -----------------------eeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhC
Confidence                                   45556655543322  22335799999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      ++||.+.+......++....+..+...+.........+..........    ..   ....... ............+++
T Consensus       215 ~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~-~~~~~~~~~~~~s~~  286 (355)
T d2b1pa1         215 KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL----TF---PKLFPDS-LFPADSEHNKLKASQ  286 (355)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCC----CH---HHHSCGG-GSCCSSHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccc----cc---ccccccc-cccccccccccCCHH
Confidence            999999999999999988888888777666555555544433211100    00   0000000 000001111234778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ++|||++||++||++||||+|+|+||||+..
T Consensus       287 ~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         287 ARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            9999999999999999999999999999864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-51  Score=382.86  Aligned_cols=253  Identities=32%  Similarity=0.504  Sum_probs=194.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|+++++||+|+||+||+|++..+++.||||+++...   ...+.+.+|+++|++++|++++...              
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57999999999999999999999999999999996432   2356788999999999999985421              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..++.++.||+.||+|||++|||||||||+|||++.++                      
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~----------------------  139 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG----------------------  139 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS----------------------
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccC----------------------
Confidence                          34589999999999999999999999999999999999997655                      


Q ss_pred             CCCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                           .+||+|||.|......   .....||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+..+.+..
T Consensus       140 -----~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~  214 (298)
T d1gz8a_         140 -----AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR  214 (298)
T ss_dssp             -----CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             -----cceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHH
Confidence                 4566666665443222   23358999999999988776 57899999999999999999999999999999988


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.+..+.+.+........ .     ......++..               ............+.++++||.+||++||++
T Consensus       215 i~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~---------------~~~~~~~~~~~~s~~~~dll~~mL~~dP~~  273 (298)
T d1gz8a_         215 IFRTLGTPDEVVWPGVTS-M-----PDYKPSFPKW---------------ARQDFSKVVPPLDEDGRSLLSQMLHYDPNK  273 (298)
T ss_dssp             HHHHHCCCCTTTSTTGGG-S-----TTCCTTSCCC---------------CCCCHHHHSTTCCHHHHHHHHHHTCSSTTT
T ss_pred             HHHhcCCCchhhcccccc-c-----cccccccccc---------------cccchhhhccCCCHHHHHHHHHHccCChhH
Confidence            888877765433211100 0     0000001000               000111222356789999999999999999


Q ss_pred             CCCHHHHHcCCCCCCC
Q 015532          377 RLKAREALRHPFFTRD  392 (405)
Q Consensus       377 Rpta~elL~hp~f~~~  392 (405)
                      |||++|+|+||||++-
T Consensus       274 R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         274 RISAKAALAHPFFQDV  289 (298)
T ss_dssp             SCCHHHHHTSGGGTTC
T ss_pred             CcCHHHHhCCHhhccC
Confidence            9999999999999864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.8e-51  Score=379.59  Aligned_cols=251  Identities=29%  Similarity=0.473  Sum_probs=192.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|+++++||+|+||+||+|+++ +++.||||+++..   ....+.+.+|+.+|+++.|++++...              
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            58999999999999999999985 7889999999653   23356788999999999999985421              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||+|||++|||||||||+|||++.++.                      
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~----------------------  138 (286)
T d1ob3a_          81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE----------------------  138 (286)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC----------------------
T ss_pred             eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCC----------------------
Confidence                         356899999999999999999999999999999999999976654                      


Q ss_pred             CCCCCceeccCCCCccccCC---ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  297 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~i  297 (405)
                           +||+|||.+......   .....|++.|+|||.+.+. .++.++|||||||++|||++|+.||.+.+..+++.++
T Consensus       139 -----~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i  213 (286)
T d1ob3a_         139 -----LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI  213 (286)
T ss_dssp             -----EEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             -----EEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHH
Confidence                 566666665433221   2234789999999999865 4689999999999999999999999999999999998


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+..+.++............ +     ......               .............++.++|||++||++||++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~---------------~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R  272 (286)
T d1ob3a_         214 FRILGTPNSKNWPNVTELPK-Y-----DPNFTV---------------YEPLPWESFLKGLDESGIDLLSKMLKLDPNQR  272 (286)
T ss_dssp             HHHHCCCCTTTSTTGGGSTT-C-----CTTCCC---------------CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHhhCCCChhhccchhhhhh-c-----cccccc---------------ccCcchhhhcccCCHHHHHHHHHHccCChhHC
Confidence            88888765432211100000 0     000000               00111122345567899999999999999999


Q ss_pred             CCHHHHHcCCCCCC
Q 015532          378 LKAREALRHPFFTR  391 (405)
Q Consensus       378 pta~elL~hp~f~~  391 (405)
                      |||+|+|+||||++
T Consensus       273 ~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         273 ITAKQALEHAYFKE  286 (286)
T ss_dssp             CCHHHHHTSGGGGC
T ss_pred             cCHHHHhcCcccCc
Confidence            99999999999985

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=381.30  Aligned_cols=263  Identities=25%  Similarity=0.439  Sum_probs=191.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|+++++||+|+||+||+|++..+|+.||||++...   ......+.+|+++|++++|+++....              
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            7899999999999999999999999999999998543   23456788999999999999874311              


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||++.....
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~  169 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL  169 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccc
Confidence                                 24578899999999999999999999999999999999998776555555554322111


Q ss_pred             CCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                      ...                    .........+||+.|+|||++.+. .|+.++|||||||++|+|++|++||.+.++.+
T Consensus       170 ~~~--------------------~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~  229 (318)
T d3blha1         170 AKN--------------------SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH  229 (318)
T ss_dssp             -------------------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccc--------------------cccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH
Confidence            000                    000111235799999999999875 68999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+.+..+.++..............       .+...............           ....++.++|||.+||++
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~dLl~~mL~~  291 (318)
T d3blha1         230 QLALISQLCGSITPEVWPNVDNYELYE-------KLELVKGQKRKVKDRLK-----------AYVRDPYALDLIDKLLVL  291 (318)
T ss_dssp             HHHHHHHHHCCCCTTTSTTCCCC--------------CCSSCCBCHHHHHH-----------HHHCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHhcCCCChhhccccchhhhhh-------hhcccccccccchhhhc-----------cccCCHHHHHHHHHHCcC
Confidence            999999998887754321110000000       00000000000000000           011256789999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~  392 (405)
                      ||++|+||+|+|+||||+..
T Consensus       292 dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         292 DPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             STTTSCCHHHHHHSGGGSSS
T ss_pred             ChhHCcCHHHHHcChhhccC
Confidence            99999999999999999964

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-49  Score=381.27  Aligned_cols=286  Identities=30%  Similarity=0.467  Sum_probs=217.1

Q ss_pred             CceEeeCCccC-CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC---------
Q 015532           81 HYVFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI---------  150 (405)
Q Consensus        81 ~~~~~~~~~~~-~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~---------  150 (405)
                      +|++.+|+.+. +||+++++||+|+||+||+|+++.+|+.||||++++.....+...+|+++++.+.|+++         
T Consensus         1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~   80 (362)
T d1q8ya_           1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN   80 (362)
T ss_dssp             CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CCCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcC
Confidence            46677899887 57999999999999999999999999999999998776667788899999999987653         


Q ss_pred             --CCCc--------------------------------cccCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCCCcEEEe
Q 015532          151 --GGTR--------------------------------YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV  195 (405)
Q Consensus       151 --~~~~--------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIli~  195 (405)
                        ....                                ...+++..++.++.||+.||.|||+ +||+||||||+|||++
T Consensus        81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~  160 (362)
T d1q8ya_          81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  160 (362)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             ceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeee
Confidence              2111                                2457889999999999999999998 8999999999999998


Q ss_pred             cccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHH
Q 015532          196 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  275 (405)
Q Consensus       196 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  275 (405)
                      ..+..                     .....++++|||.+..........+||+.|+|||++.+..|+.++||||+||++
T Consensus       161 ~~~~~---------------------~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  219 (362)
T d1q8ya_         161 IVDSP---------------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLI  219 (362)
T ss_dssp             EEETT---------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHH
T ss_pred             ccCcc---------------------cccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHH
Confidence            65421                     112347999999998777666677899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchh
Q 015532          276 VELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  349 (405)
Q Consensus       276 ~~lltg~~pf~~~~------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (405)
                      ++|++|+.||....      ..+.+..+...+|.+|..+..........+........+...... .......       
T Consensus       220 ~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------  291 (362)
T d1q8ya_         220 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW-PLEDVLT-------  291 (362)
T ss_dssp             HHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC-CHHHHHH-------
T ss_pred             HHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCC-chhhhcc-------
Confidence            99999999997543      345677778889999987765544333322222211121111111 1111111       


Q ss_pred             hhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcCCCCCCCCCC
Q 015532          350 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  395 (405)
Q Consensus       350 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~~~~  395 (405)
                      .........+++++|||.+||++||++||||+|+|+||||++....
T Consensus       292 ~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~  337 (362)
T d1q8ya_         292 EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM  337 (362)
T ss_dssp             HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred             cccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCc
Confidence            0112223457789999999999999999999999999999966443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.3e-50  Score=369.53  Aligned_cols=230  Identities=30%  Similarity=0.462  Sum_probs=186.3

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----------hhhHHHHHHHHHHHHHh-hcCCCCCc----
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLA-RHDIGGTR----  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----------~~~~~~~~E~~il~~l~-~~~~~~~~----  154 (405)
                      +.++|++.+.||+|+||+||+|++..+++.||||++++..          ...+.+.+|+.+++++. |++++...    
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            3578999999999999999999999999999999986421          23456889999999997 88874321    


Q ss_pred             -----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccC
Q 015532          155 -----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  211 (405)
Q Consensus       155 -----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~  211 (405)
                                             ...+++.+++.++.||+.||+|||++||+||||||+|||++.++             
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~-------------  147 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-------------  147 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-------------
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCC-------------
Confidence                                   24689999999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhC------CCCCCchhHHHHHHHHHHHHhCCC
Q 015532          212 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG------LGWNYPCDLWSVGCILVELCSGEA  283 (405)
Q Consensus       212 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~lltg~~  283 (405)
                                    .+||+|||++......  ....+||+.|+|||++.+      ..++.++||||+||++|+|++|+.
T Consensus       148 --------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~  213 (277)
T d1phka_         148 --------------NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP  213 (277)
T ss_dssp             --------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCC
Confidence                          4667777776554332  233679999999999974      347889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHH
Q 015532          284 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  363 (405)
Q Consensus       284 pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  363 (405)
                      ||.+.+..+....+.+..-.++                                              ......++++++
T Consensus       214 Pf~~~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~  247 (277)
T d1phka_         214 PFWHRKQMLMLRMIMSGNYQFG----------------------------------------------SPEWDDYSDTVK  247 (277)
T ss_dssp             SSCCSSHHHHHHHHHHTCCCCC----------------------------------------------TTTGGGSCHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCCCC----------------------------------------------CcccccCCHHHH
Confidence            9999887776665544211111                                              011234678999


Q ss_pred             HHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          364 DLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       364 ~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +||.+||+.||++|||++|+|+||||++-
T Consensus       248 ~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         248 DLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             HHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            99999999999999999999999999863

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-50  Score=380.34  Aligned_cols=257  Identities=31%  Similarity=0.552  Sum_probs=194.1

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      +.+||+++++||+|+||+||+|+++.+|+.||||+++...  ...+.+++|+++|+.++|+++....             
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            4578999999999999999999999999999999997533  3456788999999999999875321             


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||+|||++|||||||||+|||++.++.                  
T Consensus        86 ~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~------------------  147 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD------------------  147 (345)
T ss_dssp             EEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC------------------
T ss_pred             EEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCC------------------
Confidence                             246899999999999999999999999999999999999976664                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                               +||+|||++......      ....+||+.|+|||++.. ..++.++||||+||++|+|++|..||.+.+.
T Consensus       148 ---------~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~  218 (345)
T d1pmea_         148 ---------LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY  218 (345)
T ss_dssp             ---------EEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ---------EEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCH
Confidence                     555555555432211      233579999999999854 4678999999999999999999999999988


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhH-hhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADR-RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      .+....+....+.+.......... ....+...     ++.               .............++++++||.+|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~~~s~~~~~li~~~  278 (345)
T d1pmea_         219 LDQLNHILGILGSPSQEDLNCIINLKARNYLLS-----LPH---------------KNKVPWNRLFPNADSKALDLLDKM  278 (345)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHT-----SCC---------------CCCCCHHHHCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHhhhccCCChhhhhhhhhhhhhccccc-----CCc---------------cCCCCHHHhCCCCCHHHHHHHHHH
Confidence            888888888777766543321100 00000000     000               000001122345677899999999


Q ss_pred             cccCCCCCCCHHHHHcCCCCCCCC
Q 015532          370 LRYDPAERLKAREALRHPFFTRDV  393 (405)
Q Consensus       370 L~~dP~~Rpta~elL~hp~f~~~~  393 (405)
                      |++||++||||+|+|+||||++..
T Consensus       279 L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         279 LTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             SCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             ccCChhHCcCHHHHhcCHhhccCC
Confidence            999999999999999999999653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-50  Score=384.08  Aligned_cols=249  Identities=29%  Similarity=0.507  Sum_probs=197.5

Q ss_pred             CeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        93 ~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      +|+.+++||+|+||+||+|+++.+|+.||||+++.....   ..+|+++|++++|++++...                  
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS---CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH---HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence            599999999999999999999999999999999764432   34699999999999985421                  


Q ss_pred             ------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCC
Q 015532          155 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  216 (405)
Q Consensus       155 ------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  216 (405)
                                        ...+++.+++.++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~------------------  159 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------------  159 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT------------------
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC------------------
Confidence                              12478999999999999999999999999999999999997543                  


Q ss_pred             cccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 015532          217 YFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH  293 (405)
Q Consensus       217 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~  293 (405)
                              ..+||+|||++......  ....+||+.|+|||.+.+. .|+.++||||+||++|||++|.+||...+..+.
T Consensus       160 --------~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~  231 (350)
T d1q5ka_         160 --------AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ  231 (350)
T ss_dssp             --------CCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH
T ss_pred             --------CceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHH
Confidence                    24788888887654332  3346899999999998764 689999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccC
Q 015532          294 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  373 (405)
Q Consensus       294 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  373 (405)
                      +..+.+.+|..+...+........       ...++...              ............++++++||.+||++|
T Consensus       232 l~~i~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~--------------~~~~~~~~~~~~s~~~~dLl~~mL~~d  290 (350)
T d1q5ka_         232 LVEIIKVLGTPTREQIREMNPNYT-------EFKFPQIK--------------AHPWTKVFRPRTPPEAIALCSRLLEYT  290 (350)
T ss_dssp             HHHHHHHHCCCCHHHHHHHCC----------CCCCCCCC--------------CCCGGGTSCTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHHhCCChHHhhhhhccchh-------hccccccc--------------cCchhhhcccCCCHHHHHHHHHHccCC
Confidence            999999999988766543321111       11111100              000111122346788999999999999


Q ss_pred             CCCCCCHHHHHcCCCCCC
Q 015532          374 PAERLKAREALRHPFFTR  391 (405)
Q Consensus       374 P~~Rpta~elL~hp~f~~  391 (405)
                      |++||||.|+|+||||++
T Consensus       291 P~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         291 PTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             GGGSCCHHHHHTSGGGGG
T ss_pred             hhHCcCHHHHhcCHhhcc
Confidence            999999999999999976

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-51  Score=376.60  Aligned_cols=221  Identities=25%  Similarity=0.377  Sum_probs=177.9

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhh-------hhHHHHHHHHHHHHHh--hcCCCCCc------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA--RHDIGGTR------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~il~~l~--~~~~~~~~------  154 (405)
                      +.++|++.+.||+|+||+||+|++..+++.||||++++...       ....+.+|+.+|+++.  |+|++...      
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP   81 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence            46789999999999999999999999999999999964321       1233568999999997  67774321      


Q ss_pred             ----------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 ----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 ----------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                            ...+++.+++.++.||+.||+|||++||+||||||+|||++.+               
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~---------------  146 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN---------------  146 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT---------------
T ss_pred             CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecC---------------
Confidence                                  2457999999999999999999999999999999999999743               


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhCCCC-CCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                                 +..+||+|||+|...... ....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.
T Consensus       147 -----------~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  215 (273)
T d1xwsa_         147 -----------RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE  215 (273)
T ss_dssp             -----------TTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH
T ss_pred             -----------CCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH
Confidence                       235778888887654433 244689999999999988765 5779999999999999999999975321


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                            +.+.                        ..                          .....+++++.+||.+||
T Consensus       216 ------i~~~------------------------~~--------------------------~~~~~~s~~~~~li~~~L  239 (273)
T d1xwsa_         216 ------IIRG------------------------QV--------------------------FFRQRVSSECQHLIRWCL  239 (273)
T ss_dssp             ------HHHC------------------------CC--------------------------CCSSCCCHHHHHHHHHHT
T ss_pred             ------Hhhc------------------------cc--------------------------CCCCCCCHHHHHHHHHHc
Confidence                  1110                        00                          112345779999999999


Q ss_pred             ccCCCCCCCHHHHHcCCCCCCC
Q 015532          371 RYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       371 ~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      +.||++|||++|+|+||||++.
T Consensus       240 ~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         240 ALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             CSSGGGSCCHHHHHTSGGGSSC
T ss_pred             cCCHhHCcCHHHHhcCHhhCCC
Confidence            9999999999999999999874

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-50  Score=379.62  Aligned_cols=265  Identities=27%  Similarity=0.503  Sum_probs=204.6

Q ss_pred             CceEeeCCc---cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc
Q 015532           81 HYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR  154 (405)
Q Consensus        81 ~~~~~~~~~---~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~  154 (405)
                      +|....+..   +.+||+++++||+|+||+||+|++..+|+.||||++++..   ...+.+.+|+++|+.+.|++++...
T Consensus         4 ~~~~~~~~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~   83 (348)
T d2gfsa1           4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL   83 (348)
T ss_dssp             EEEEECSSSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             cEEEecCCccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence            444444432   3478999999999999999999999999999999996532   3345678999999999999875321


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++.+++.++.||+.||+|||++||+||||||+|||++.+|     
T Consensus        84 ~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~-----  158 (348)
T d2gfsa1          84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----  158 (348)
T ss_dssp             EEECSCSSTTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----
T ss_pred             EEEeeccccccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccc-----
Confidence                                           24589999999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCC
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGE  282 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~  282 (405)
                                            .+|++|||.+...........||+.|+|||++.+.. ++.++|||||||++|+|++|.
T Consensus       159 ----------------------~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~  216 (348)
T d2gfsa1         159 ----------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  216 (348)
T ss_dssp             ----------------------CEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ----------------------cccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCC
Confidence                                  467777777766665556678999999999988764 689999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchh-hhhhcccCchHH
Q 015532          283 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN-LIMQHVDHSAGD  361 (405)
Q Consensus       283 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  361 (405)
                      +||.+.+.......+.+..+..+..+...........+...                    ....+. .........+++
T Consensus       217 ~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~s~~  276 (348)
T d2gfsa1         217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS--------------------LTQMPKMNFANVFIGANPL  276 (348)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTT--------------------SCCCCCCCHHHHSTTCCHH
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhh--------------------cccCCCcchhhhcCCCCHH
Confidence            99999999999999999888877665432211111111000                    000000 011123456789


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHcCCCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALRHPFFTRD  392 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~hp~f~~~  392 (405)
                      ++|||.+||++||++||||+|+|+||||++.
T Consensus       277 ~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-50  Score=376.93  Aligned_cols=223  Identities=25%  Similarity=0.391  Sum_probs=182.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHH-HHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQ-RLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~-~l~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+++.||||++++.    ....+.+..|+.++. .+.|++++...            
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            4699999999999999999999999999999999653    233455677877765 68999885422            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++.+++.++.||+.||+|||++||+||||||+|||++..|                     
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~---------------------  140 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG---------------------  140 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS---------------------
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCC---------------------
Confidence                           24689999999999999999999999999999999999997665                     


Q ss_pred             CCCCCCCceeccCCCCccccC---CccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  296 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~~  296 (405)
                            .+||+|||++.....   ......||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+....
T Consensus       141 ------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~  214 (320)
T d1xjda_         141 ------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS  214 (320)
T ss_dssp             ------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             ------ceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                  456666666653322   22335799999999999999999999999999999999999999999887776665


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +.......                                                  +..+++++.+||.+||+.||++
T Consensus       215 i~~~~~~~--------------------------------------------------p~~~s~~~~dli~~~L~~dP~~  244 (320)
T d1xjda_         215 IRMDNPFY--------------------------------------------------PRWLEKEAKDLLVKLFVREPEK  244 (320)
T ss_dssp             HHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHSCSSGGG
T ss_pred             HHcCCCCC--------------------------------------------------CccCCHHHHHHHHHhcccCCCC
Confidence            54321111                                                  1235778999999999999999


Q ss_pred             CCCHH-HHHcCCCCCC
Q 015532          377 RLKAR-EALRHPFFTR  391 (405)
Q Consensus       377 Rpta~-elL~hp~f~~  391 (405)
                      |||+. |+++||||++
T Consensus       245 R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         245 RLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             SBTTBSCGGGSGGGTT
T ss_pred             CcCHHHHHHhCchhcc
Confidence            99995 8999999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.5e-50  Score=380.72  Aligned_cols=227  Identities=25%  Similarity=0.380  Sum_probs=175.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh----hhhHHHHHH---HHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIE---IDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~~~~E---~~il~~l~~~~~~~~~----------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++.+..    .....+.+|   +.+++.+.|++++...          
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            56999999999999999999999999999999996432    222334445   5555566788875421          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..++.++.||+.||.|||++|||||||||+|||++.+|                   
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g-------------------  144 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-------------------  144 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS-------------------
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCC-------------------
Confidence                             23578899999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCC-ccceecCCCcchhHHHhC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  295 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~~~~  295 (405)
                              .+||+|||+|...... ....+||+.|+|||++.+ ..|+.++|||||||++|+|++|+.||.+....+...
T Consensus       145 --------~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~  216 (364)
T d1omwa3         145 --------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE  216 (364)
T ss_dssp             --------CEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH
T ss_pred             --------cEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                    4677777776644332 334689999999999975 569999999999999999999999998755433222


Q ss_pred             HHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCC
Q 015532          296 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  375 (405)
Q Consensus       296 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  375 (405)
                      ........                                               ....+..+++++++||.+||+.||+
T Consensus       217 ~~~~~~~~-----------------------------------------------~~~~~~~~s~~~~~li~~~L~~dP~  249 (364)
T d1omwa3         217 IDRMTLTM-----------------------------------------------AVELPDSFSPELRSLLEGLLQRDVN  249 (364)
T ss_dssp             HHHHSSSC-----------------------------------------------CCCCCSSSCHHHHHHHHHHTCSSTT
T ss_pred             HHHhcccC-----------------------------------------------CCCCCCCCCHHHHHHHHHHcccCHH
Confidence            21111110                                               0112235678999999999999999


Q ss_pred             CCCC-----HHHHHcCCCCCCC
Q 015532          376 ERLK-----AREALRHPFFTRD  392 (405)
Q Consensus       376 ~Rpt-----a~elL~hp~f~~~  392 (405)
                      +|||     |+|+++||||++-
T Consensus       250 ~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         250 RRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             TSTTTSSSTHHHHHTSGGGTTC
T ss_pred             HhCCCcccCHHHHHcCccccCC
Confidence            9999     8999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.8e-49  Score=374.53  Aligned_cols=260  Identities=26%  Similarity=0.507  Sum_probs=189.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHh-hcCCCCC-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGT-----------------  153 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~-~~~~~~~-----------------  153 (405)
                      ++|+++++||+|+||+||+|+++.+++.||||+++...  .+.+.+|+++|+.+. |+++...                 
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            68999999999999999999999999999999997533  456789999999996 7776321                 


Q ss_pred             ---------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCC
Q 015532          154 ---------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS  224 (405)
Q Consensus       154 ---------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~  224 (405)
                               ....+++..++.++.||+.||+|||++||+||||||+|||++.++                          
T Consensus       113 ~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~--------------------------  166 (328)
T d3bqca1         113 HVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--------------------------  166 (328)
T ss_dssp             CCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--------------------------
T ss_pred             ecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC--------------------------
Confidence                     134689999999999999999999999999999999999998643                          


Q ss_pred             CCceeccCCCCccccC--CccceecCCCcchhHHHhCC-CCCCchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHH
Q 015532          225 SAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAMMERV  300 (405)
Q Consensus       225 ~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~lltg~~pf~~~-~~~~~~~~i~~~  300 (405)
                      ..+||+|||+|.....  .....+||+.|+|||++.+. .++.++||||+||++|+|++|..||... +..++...+...
T Consensus       167 ~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~  246 (328)
T d3bqca1         167 RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV  246 (328)
T ss_dssp             TEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred             CeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHH
Confidence            2367777777654432  23345789999999999876 4799999999999999999999999654 455666667776


Q ss_pred             hCCCChHHH-HHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchh-hhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          301 LGPLPHHMV-IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN-LIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       301 ~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +|....... ..........+..     ... ....         ..... .........+++++|||.+||++||++||
T Consensus       247 ~g~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~---------~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~  311 (328)
T d3bqca1         247 LGTEDLYDYIDKYNIELDPRFND-----ILG-RHSR---------KRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL  311 (328)
T ss_dssp             HCHHHHHHHHHHTTCCCCGGGGG-----TCC-CCCC---------CCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HCCchhhhhhhhcccccCcccch-----hcc-cccc---------cchhhcccccccccCCHHHHHHHHHHccCChhHCc
Confidence            664221111 0000000000000     000 0000         00000 01112234578899999999999999999


Q ss_pred             CHHHHHcCCCCCCCCC
Q 015532          379 KAREALRHPFFTRDVR  394 (405)
Q Consensus       379 ta~elL~hp~f~~~~~  394 (405)
                      ||+|+|+||||+.-.+
T Consensus       312 ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         312 TAREAMEHPYFYTVVK  327 (328)
T ss_dssp             CHHHHHTSGGGTTSCC
T ss_pred             CHHHHhcCcccCCCCC
Confidence            9999999999987543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-50  Score=380.28  Aligned_cols=237  Identities=24%  Similarity=0.446  Sum_probs=182.4

Q ss_pred             cCCCeEEEe-eeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHH-hhcCCCCCc-------------
Q 015532           90 LTPRYRILS-KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTR-------------  154 (405)
Q Consensus        90 ~~~~y~~~~-~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l-~~~~~~~~~-------------  154 (405)
                      +.++|++++ .||+|+||+||+|++..+++.||||+++..    ....+|+.++.++ .|++++...             
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            456799886 599999999999999999999999999753    3466799987766 688874311             


Q ss_pred             --------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCC
Q 015532          155 --------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  214 (405)
Q Consensus       155 --------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  214 (405)
                                          ...+++.+++.++.||+.||+|||++||+||||||+|||++..+                
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~----------------  148 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR----------------  148 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS----------------
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccc----------------
Confidence                                13589999999999999999999999999999999999997532                


Q ss_pred             CCcccCCCCCCCceeccCCCCccccCC--ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          215 GSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       215 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                              ....+||+|||+|+.....  ....+||+.|+|||++.+..|+.++|||||||++|+|+||++||.+.+...
T Consensus       149 --------~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~  220 (335)
T d2ozaa1         149 --------PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA  220 (335)
T ss_dssp             --------TTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-
T ss_pred             --------ccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH
Confidence                    3456899999988754432  334689999999999999899999999999999999999999998765444


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.....                    .....++.                      .....+++++.+||.+||++
T Consensus       221 ~~~~~~~~i~--------------------~~~~~~~~----------------------~~~~~~s~~~~~li~~~L~~  258 (335)
T d2ozaa1         221 ISPGMKTRIR--------------------MGQYEFPN----------------------PEWSEVSEEVKMLIRNLLKT  258 (335)
T ss_dssp             -------CCC--------------------SCSSSCCT----------------------THHHHSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHh--------------------cCCCCCCC----------------------cccccCCHHHHHHHHHHccC
Confidence            3322211100                    00011110                      01123577899999999999


Q ss_pred             CCCCCCCHHHHHcCCCCCCCCCCC
Q 015532          373 DPAERLKAREALRHPFFTRDVRRP  396 (405)
Q Consensus       373 dP~~Rpta~elL~hp~f~~~~~~~  396 (405)
                      ||++|||+.|+|+||||++....+
T Consensus       259 dP~~R~s~~eil~hp~~~~~~~~~  282 (335)
T d2ozaa1         259 EPTQRMTITEFMNHPWIMQSTKVP  282 (335)
T ss_dssp             STTTSCCHHHHHHSHHHHTTTSSC
T ss_pred             ChhHCcCHHHHHcCHHhhCCCCCC
Confidence            999999999999999998765443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-49  Score=366.26  Aligned_cols=253  Identities=30%  Similarity=0.475  Sum_probs=192.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh---hhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      ++|+++++||+|+||+||+|++..+++.||||+++...   ...+.+.+|+.+|+.++|++++...              
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            58999999999999999999999999999999996432   3457788999999999999985422              


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.|++.||+|||++||+||||||+|||++.++                       
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~-----------------------  138 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-----------------------  138 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------------------
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCC-----------------------
Confidence                         35678999999999999999999999999999999999997654                       


Q ss_pred             CCCCCceeccCCCCccccCCc---cceecCCCcchhHHHhCCC-CCCchhHHHHHHHHHHHHhCCCCC-CCCChHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALF-QTHENLEHLAM  296 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~lltg~~pf-~~~~~~~~~~~  296 (405)
                          .+||+|||.+.......   ....+++.|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+..+.+..
T Consensus       139 ----~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~  214 (292)
T d1unla_         139 ----ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_dssp             ----CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred             ----ceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHH
Confidence                46677777665443322   2246788999999998765 689999999999999999998885 55666777777


Q ss_pred             HHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCC
Q 015532          297 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  376 (405)
Q Consensus       297 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  376 (405)
                      +....+.++...........    . .  ...+.              ..............++.+.+||.+||++||.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~----~-~--~~~~~--------------~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~  273 (292)
T d1unla_         215 IFRLLGTPTEEQWPSMTKLP----D-Y--KPYPM--------------YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQ  273 (292)
T ss_dssp             HHHHHCCCCTTTCTTGGGST----T-C--CCCCC--------------CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHhhcCCCChhhhhhhhhcc----c-c--ccccc--------------ccccchhhhccccCCHHHHHHHHHHccCChhH
Confidence            87777765543211110000    0 0  00000              00011112223456788999999999999999


Q ss_pred             CCCHHHHHcCCCCCCC
Q 015532          377 RLKAREALRHPFFTRD  392 (405)
Q Consensus       377 Rpta~elL~hp~f~~~  392 (405)
                      ||||+|+|+||||++-
T Consensus       274 R~sa~e~L~Hp~f~~~  289 (292)
T d1unla_         274 RISAEEALQHPYFSDF  289 (292)
T ss_dssp             SCCHHHHTTSGGGSSC
T ss_pred             CcCHHHHhcChhhcCC
Confidence            9999999999999863

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.5e-48  Score=357.83  Aligned_cols=227  Identities=24%  Similarity=0.290  Sum_probs=175.3

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      .+.++|++.+.||+|+||+||+|++..+++.||||+++..    ....+.+.+|+++|+.++|++++...          
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSS
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCC
Confidence            4678899999999999999999999999999999999643    23345688999999999999985421          


Q ss_pred             ---------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCC
Q 015532          155 ---------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  213 (405)
Q Consensus       155 ---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~  213 (405)
                                           ...+++.+++.++.||+.||+|||++||+||||||+|||++.++..+++|         
T Consensus        84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d---------  154 (277)
T d1o6ya_          84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD---------  154 (277)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECC---------
T ss_pred             ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeeh---------
Confidence                                 24689999999999999999999999999999999999998776555544         


Q ss_pred             CCCcccCCCCCCCceeccCCCCcccc------CCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 015532          214 DGSYFKNLPKSSAIKLIDFGSTTFEH------QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  287 (405)
Q Consensus       214 ~~~~~~~~~~~~~~kl~Dfg~a~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~  287 (405)
                                        ||.+....      ......+||+.|+|||++.+..|+.++|||||||++|+|+||.+||.+
T Consensus       155 ------------------~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  216 (277)
T d1o6ya_         155 ------------------FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG  216 (277)
T ss_dssp             ------------------CTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ------------------hhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCC
Confidence                              44443221      112335899999999999999999999999999999999999999998


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          288 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       288 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      .+..+.+..+.+....+|                                              ......+++++.+||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~s~~l~~li~  250 (277)
T d1o6ya_         217 DSPVSVAYQHVREDPIPP----------------------------------------------SARHEGLSADLDAVVL  250 (277)
T ss_dssp             SSHHHHHHHHHHCCCCCG----------------------------------------------GGTSSSCCHHHHHHHH
T ss_pred             cCHHHHHHHHHhcCCCCC----------------------------------------------chhccCCCHHHHHHHH
Confidence            887766655433211111                                              1122456789999999


Q ss_pred             HccccCCCCCC-CHHHHHcCCCC
Q 015532          368 GLLRYDPAERL-KAREALRHPFF  389 (405)
Q Consensus       368 ~~L~~dP~~Rp-ta~elL~hp~f  389 (405)
                      +||+.||++|| |+++++ |+|+
T Consensus       251 ~~L~~dp~~R~~sa~~l~-~~l~  272 (277)
T d1o6ya_         251 KALAKNPENRYQTAAEMR-ADLV  272 (277)
T ss_dssp             HHTCSSGGGSCSSHHHHH-HHHH
T ss_pred             HHccCCHhHCHhHHHHHH-HHHH
Confidence            99999999999 566554 5554

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.1e-48  Score=357.65  Aligned_cols=218  Identities=17%  Similarity=0.282  Sum_probs=175.9

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||+||+|+++.+++.||||+++......+.+.+|+++|++++|+|++...                 
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~   96 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   96 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeeccc
Confidence            579999999999999999999999999999999987666677899999999999999984421                 


Q ss_pred             ------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCC
Q 015532          155 ------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  222 (405)
Q Consensus       155 ------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  222 (405)
                                  ...+++..+..++.||+.||+|||++||+||||||+|||++.++                        
T Consensus        97 ~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~------------------------  152 (287)
T d1opja_          97 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH------------------------  152 (287)
T ss_dssp             TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG------------------------
T ss_pred             CcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCC------------------------
Confidence                        24578899999999999999999999999999999999997665                        


Q ss_pred             CCCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHH
Q 015532          223 KSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ-THENLEHLAMM  297 (405)
Q Consensus       223 ~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~-~~~~~~~~~~i  297 (405)
                         .+||+|||+|+......    ....||+.|+|||++.+..|+.++|||||||++|||++|..||. +.+..+....+
T Consensus       153 ---~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i  229 (287)
T d1opja_         153 ---LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  229 (287)
T ss_dssp             ---CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             ---cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH
Confidence               46677777766543322    12468999999999999999999999999999999999666554 44433333222


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      ...                       .+.                          ..+..+++++.+||.+||+.||++|
T Consensus       230 ~~~-----------------------~~~--------------------------~~~~~~~~~l~~li~~cl~~dP~~R  260 (287)
T d1opja_         230 EKD-----------------------YRM--------------------------ERPEGCPEKVYELMRACWQWNPSDR  260 (287)
T ss_dssp             HTT-----------------------CCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hcC-----------------------CCC--------------------------CCCccchHHHHHHHHHHcCCCHhHC
Confidence            110                       011                          1123457789999999999999999


Q ss_pred             CCHHHHHc
Q 015532          378 LKAREALR  385 (405)
Q Consensus       378 pta~elL~  385 (405)
                      ||++|+++
T Consensus       261 ps~~ei~~  268 (287)
T d1opja_         261 PSFAEIHQ  268 (287)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-48  Score=357.08  Aligned_cols=223  Identities=23%  Similarity=0.366  Sum_probs=179.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||+||+|+++ +++.||||+++......+.+.+|+++|.+++|+|++...                 
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~   91 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN   91 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred             HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCC
Confidence            57999999999999999999985 567899999987666678899999999999999985422                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||.|||++||+||||||+|||++.++                         
T Consensus        92 g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~-------------------------  146 (272)
T d1qpca_          92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL-------------------------  146 (272)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-------------------------
T ss_pred             CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeeccc-------------------------
Confidence                       12478999999999999999999999999999999999997655                         


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg-~~pf~~~~~~~~~~~i~  298 (405)
                        .+||+|||+|+......    ....||+.|+|||++.+..|+.++|||||||++|||+|| .+||...+..+.+..+.
T Consensus       147 --~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~  224 (272)
T d1qpca_         147 --SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE  224 (272)
T ss_dssp             --CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             --ceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence              45666666665443221    235789999999999988999999999999999999995 56666666555544432


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ...                       +..                          .+..+++++.+||.+||+.||++||
T Consensus       225 ~~~-----------------------~~~--------------------------~p~~~~~~l~~li~~cl~~~P~~Rp  255 (272)
T d1qpca_         225 RGY-----------------------RMV--------------------------RPDNCPEELYQLMRLCWKERPEDRP  255 (272)
T ss_dssp             TTC-----------------------CCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hcC-----------------------CCC--------------------------CcccChHHHHHHHHHHcCCCHhHCc
Confidence            211                       011                          1134567899999999999999999


Q ss_pred             CHHHHHc--CCCCCC
Q 015532          379 KAREALR--HPFFTR  391 (405)
Q Consensus       379 ta~elL~--hp~f~~  391 (405)
                      |++|+++  |+||+.
T Consensus       256 t~~ei~~~L~~~fts  270 (272)
T d1qpca_         256 TFDYLRSVLEDFFTA  270 (272)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhhhhhc
Confidence            9999998  788854

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-47  Score=349.09  Aligned_cols=218  Identities=23%  Similarity=0.347  Sum_probs=170.7

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||+||+|++. +++.||||+++......+.+.+|++++++++|+|++...                 
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            46999999999999999999986 567899999987666778899999999999999985422                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.                        
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~------------------------  139 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV------------------------  139 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGC------------------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCC------------------------
Confidence                       245788999999999999999999999999999999999987664                        


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                         +||+|||+++......    ....||+.|+|||++.+..|+.++|||||||++|||+| |.+||...+..+.+..+.
T Consensus       140 ---~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~  216 (263)
T d1sm2a_         140 ---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS  216 (263)
T ss_dssp             ---EEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH
T ss_pred             ---eEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence               5666666654433221    22468999999999999999999999999999999999 577777766666555443


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      ...                       +..                          .+...++++.+||.+||+.||++||
T Consensus       217 ~~~-----------------------~~~--------------------------~p~~~~~~l~~li~~cl~~~p~~Rp  247 (263)
T d1sm2a_         217 TGF-----------------------RLY--------------------------KPRLASTHVYQIMNHCWKERPEDRP  247 (263)
T ss_dssp             HTC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hcC-----------------------CCC--------------------------CccccCHHHHHHHHHHccCCHhHCc
Confidence            311                       111                          1123466899999999999999999


Q ss_pred             CHHHHHcC
Q 015532          379 KAREALRH  386 (405)
Q Consensus       379 ta~elL~h  386 (405)
                      |++|+++|
T Consensus       248 s~~~il~~  255 (263)
T d1sm2a_         248 AFSRLLRQ  255 (263)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999986

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-47  Score=351.84  Aligned_cols=222  Identities=22%  Similarity=0.291  Sum_probs=171.9

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc-------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR-------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~-------------  154 (405)
                      .++|++.++||+|+||+||+|+.+   ..||||+++..   ....+.+.+|+.+|++++|+|++...             
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEe
Confidence            367999999999999999999864   35999998642   33456788999999999999985421             


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.||+.||+|||++|||||||||+|||++.++.                     
T Consensus        84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~---------------------  142 (276)
T d1uwha_          84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT---------------------  142 (276)
T ss_dssp             CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSS---------------------
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCC---------------------
Confidence                          245889999999999999999999999999999999999987654                     


Q ss_pred             CCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHENLE  292 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~lltg~~pf~~~~~~~  292 (405)
                            +||+|||+|......     .....||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+.+...
T Consensus       143 ------~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~  216 (276)
T d1uwha_         143 ------VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD  216 (276)
T ss_dssp             ------EEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH
T ss_pred             ------EEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH
Confidence                  566666666543221     1235799999999999753   48999999999999999999999999877665


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      .+..+.......|                                            ........+++++.+||.+||+.
T Consensus       217 ~~~~~~~~~~~~p--------------------------------------------~~~~~~~~~~~~l~~li~~cl~~  252 (276)
T d1uwha_         217 QIIFMVGRGYLSP--------------------------------------------DLSKVRSNCPKAMKRLMAECLKK  252 (276)
T ss_dssp             HHHHHHHHTSCCC--------------------------------------------CGGGSCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCCCCC--------------------------------------------cchhccccchHHHHHHHHHHcCC
Confidence            5443322111111                                            01112235677999999999999


Q ss_pred             CCCCCCCHHHHHcC
Q 015532          373 DPAERLKAREALRH  386 (405)
Q Consensus       373 dP~~Rpta~elL~h  386 (405)
                      ||++|||++|++++
T Consensus       253 dp~~RPt~~~il~~  266 (276)
T d1uwha_         253 KRDERPLFPQILAS  266 (276)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999976

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-47  Score=347.84  Aligned_cols=218  Identities=19%  Similarity=0.305  Sum_probs=179.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      +.|++.++||+|+||+||+|+++ +++.||||+++......+.+++|+.++.+++|+|++...                 
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            45889999999999999999985 778899999987777778899999999999999985422                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++..++.++.||+.||.|||++||+||||||+|||++.++.                        
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~------------------------  138 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV------------------------  138 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCC------------------------
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCc------------------------
Confidence                       245788899999999999999999999999999999999976654                        


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~  298 (405)
                         +||+|||++.......    ....||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+.+..+....+.
T Consensus       139 ---~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~  215 (258)
T d1k2pa_         139 ---VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA  215 (258)
T ss_dssp             ---EEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH
T ss_pred             ---EEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH
Confidence               5666666654332221    12468999999999999999999999999999999998 899999988877666554


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +...                       ..                          .+...++.+.+||.+||+.||++||
T Consensus       216 ~~~~-----------------------~~--------------------------~p~~~~~~l~~li~~cl~~dP~~RP  246 (258)
T d1k2pa_         216 QGLR-----------------------LY--------------------------RPHLASEKVYTIMYSCWHEKADERP  246 (258)
T ss_dssp             TTCC-----------------------CC--------------------------CCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             hCCC-----------------------CC--------------------------CcccccHHHHHHHHHHccCCHhHCc
Confidence            3211                       11                          1123466899999999999999999


Q ss_pred             CHHHHHcC
Q 015532          379 KAREALRH  386 (405)
Q Consensus       379 ta~elL~h  386 (405)
                      |++++++|
T Consensus       247 t~~eil~~  254 (258)
T d1k2pa_         247 TFKILLSN  254 (258)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999986

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-46  Score=350.22  Aligned_cols=219  Identities=23%  Similarity=0.314  Sum_probs=168.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc---EEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|++.++||+|+||+||+|+++.+++   .||||++...  ....+.+.+|+++|++++|+|++...            
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            579999999999999999999976654   5899988542  34456789999999999999985421            


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++.++..++.||+.||.|||++||+||||||+|||++.++.                   
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~-------------------  166 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV-------------------  166 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC-------------------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCc-------------------
Confidence                            235899999999999999999999999999999999999977664                   


Q ss_pred             cCCCCCCCceeccCCCCccccCCc--------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  289 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~  289 (405)
                              +||+|||+++......        ....||+.|||||++.+..|+.++|||||||++|||+| |..||.+.+
T Consensus       167 --------~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~  238 (299)
T d1jpaa_         167 --------CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT  238 (299)
T ss_dssp             --------EEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             --------EEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC
Confidence                    5555555554332211        11357899999999999999999999999999999998 899999888


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+.+..+.+..                       +..                          .+..+++.+.+||.+|
T Consensus       239 ~~~~~~~i~~~~-----------------------~~~--------------------------~~~~~~~~l~~li~~c  269 (299)
T d1jpaa_         239 NQDVINAIEQDY-----------------------RLP--------------------------PPMDCPSALHQLMLDC  269 (299)
T ss_dssp             HHHHHHHHHTTC-----------------------CCC--------------------------CCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCC-----------------------CCC--------------------------CCccchHHHHHHHHHH
Confidence            776665543311                       111                          1124567899999999


Q ss_pred             cccCCCCCCCHHHHHcC
Q 015532          370 LRYDPAERLKAREALRH  386 (405)
Q Consensus       370 L~~dP~~Rpta~elL~h  386 (405)
                      |+.||++|||+.|++++
T Consensus       270 l~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         270 WQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             TCSSTTTSCCHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHH
Confidence            99999999999998864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=346.87  Aligned_cols=225  Identities=24%  Similarity=0.334  Sum_probs=178.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.+.||+|+||+||+|+++.+ +.||||+++......+.+.+|+.++++++|+|++...                 
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~   95 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK   95 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCC
Confidence            5799999999999999999999755 5699999987666678899999999999999985422                 


Q ss_pred             -----------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCC
Q 015532          155 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  223 (405)
Q Consensus       155 -----------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  223 (405)
                                 ...+++.++..++.||+.||.|||++||+||||||+||||+.++                         
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~-------------------------  150 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-------------------------  150 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-------------------------
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCC-------------------------
Confidence                       13579999999999999999999999999999999999997765                         


Q ss_pred             CCCceeccCCCCccccCCc----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHH
Q 015532          224 SSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHENLEHLAMME  298 (405)
Q Consensus       224 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg-~~pf~~~~~~~~~~~i~  298 (405)
                        .+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++| .+||.+....+.+..+.
T Consensus       151 --~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~  228 (285)
T d1fmka3         151 --VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  228 (285)
T ss_dssp             --CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             --cEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence              45666666665432221    225789999999999999999999999999999999995 55566666555555443


Q ss_pred             HHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCC
Q 015532          299 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  378 (405)
Q Consensus       299 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  378 (405)
                      +..                       +.                          .....+++++.+||.+||+.||++||
T Consensus       229 ~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~cl~~dP~~Rp  259 (285)
T d1fmka3         229 RGY-----------------------RM--------------------------PCPPECPESLHDLMCQCWRKEPEERP  259 (285)
T ss_dssp             TTC-----------------------CC--------------------------CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hcC-----------------------CC--------------------------CCCcccCHHHHHHHHHHcccCHhHCc
Confidence            211                       00                          11234567899999999999999999


Q ss_pred             CHHHHHc--CCCCCCCC
Q 015532          379 KAREALR--HPFFTRDV  393 (405)
Q Consensus       379 ta~elL~--hp~f~~~~  393 (405)
                      |+++|++  |+||+...
T Consensus       260 s~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         260 TFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             CHHHHHHHHHTTTSCSC
T ss_pred             CHHHHHHHHhhhhcCCC
Confidence            9999998  99997653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-47  Score=356.10  Aligned_cols=228  Identities=27%  Similarity=0.371  Sum_probs=175.4

Q ss_pred             CCeEEEeeeecccceeEEEEEec---CCCcEEEEEEecch-----hhhhHHHHHHHHHHHHHhhc-CCCCCc--------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI-----NKYREAAMIEIDVLQRLARH-DIGGTR--------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~---~~~~~vAiK~~~~~-----~~~~~~~~~E~~il~~l~~~-~~~~~~--------  154 (405)
                      ++|+++++||+|+||+||+|++.   .+|+.||||++++.     ....+.+.+|+++|+++.|+ ++....        
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            56999999999999999999874   46899999998642     23345677899999999996 553211        


Q ss_pred             -------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCC
Q 015532          155 -------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  215 (405)
Q Consensus       155 -------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  215 (405)
                                         ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.                
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~----------------  167 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH----------------  167 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC----------------
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCC----------------
Confidence                               245688999999999999999999999999999999999977654                


Q ss_pred             CcccCCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 015532          216 SYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHE  289 (405)
Q Consensus       216 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~lltg~~pf~~~~  289 (405)
                                 +||+|||++......    .....|++.|+|||.+.+.  .++.++|||||||++|+|++|..||.+.+
T Consensus       168 -----------vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~  236 (322)
T d1vzoa_         168 -----------VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG  236 (322)
T ss_dssp             -----------EEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTT
T ss_pred             -----------EEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence                       566666655433221    2235799999999999865  46789999999999999999999998765


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHc
Q 015532          290 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  369 (405)
Q Consensus       290 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  369 (405)
                      ..+....+.+....                                              .....+...++++++||.+|
T Consensus       237 ~~~~~~~i~~~~~~----------------------------------------------~~~~~~~~~s~~~~~li~~~  270 (322)
T d1vzoa_         237 EKNSQAEISRRILK----------------------------------------------SEPPYPQEMSALAKDLIQRL  270 (322)
T ss_dssp             SCCCHHHHHHHHHH----------------------------------------------CCCCCCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccc----------------------------------------------CCCCCcccCCHHHHHHHHHH
Confidence            54433333221100                                              00011234678999999999


Q ss_pred             cccCCCCCC-----CHHHHHcCCCCCCC
Q 015532          370 LRYDPAERL-----KAREALRHPFFTRD  392 (405)
Q Consensus       370 L~~dP~~Rp-----ta~elL~hp~f~~~  392 (405)
                      |++||++||     ||+|+|+||||++-
T Consensus       271 l~~dP~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         271 LMKDPKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             TCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             cccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence            999999999     59999999999873

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-46  Score=347.34  Aligned_cols=236  Identities=22%  Similarity=0.286  Sum_probs=180.9

Q ss_pred             cCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        90 ~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++.... ..+.+..|+++++.+.|++++...               
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            4568999999999999999999999999999999986543 334578899999999998874322               


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..+..++.||+.||+|||++||+||||||+|||++..+                       
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~-----------------------  140 (299)
T d1ckia_          84 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK-----------------------  140 (299)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG-----------------------
T ss_pred             EcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccC-----------------------
Confidence                         24689999999999999999999999999999999999986532                       


Q ss_pred             CCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH
Q 015532          222 PKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  291 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~  291 (405)
                       .+..++|+|||+|+.....          .....||+.|+|||++.+..++.++|||||||++|||++|..||......
T Consensus       141 -~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~  219 (299)
T d1ckia_         141 -KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA  219 (299)
T ss_dssp             -GTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--
T ss_pred             -CCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchH
Confidence             3445778888877654322          22357999999999999999999999999999999999999999876655


Q ss_pred             HHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccc
Q 015532          292 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  371 (405)
Q Consensus       292 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  371 (405)
                      +....+.+...                                          .............+++++.+||.+||+
T Consensus       220 ~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~p~~~~~li~~cl~  257 (299)
T d1ckia_         220 TKRQKYERISE------------------------------------------KKMSTPIEVLCKGYPSEFATYLNFCRS  257 (299)
T ss_dssp             -----HHHHHH------------------------------------------HHHHSCHHHHTTTSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhc------------------------------------------ccCCCChhHhccCCCHHHHHHHHHHcc
Confidence            44333222100                                          000000111223567789999999999


Q ss_pred             cCCCCCCCHH---HHHcCCCCCCC
Q 015532          372 YDPAERLKAR---EALRHPFFTRD  392 (405)
Q Consensus       372 ~dP~~Rpta~---elL~hp~f~~~  392 (405)
                      .||++||+++   ++|+|+|.++.
T Consensus       258 ~~p~~RP~~~~i~~~l~~~~~~~~  281 (299)
T d1ckia_         258 LRFDDKPDYSYLRQLFRNLFHRQG  281 (299)
T ss_dssp             SCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             CChhHCcCHHHHHHHHHHHHHHcC
Confidence            9999999986   55778876544

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-46  Score=346.78  Aligned_cols=223  Identities=25%  Similarity=0.349  Sum_probs=176.2

Q ss_pred             CCeEEEe-eeecccceeEEEEEecC--CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILS-KMGEGTFGQVVECFDNE--KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~-~LG~G~fg~V~~a~~~~--~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|.+.+ +||+|+||+||+|.++.  ++..||||+++..  ....+.+.+|+++|++++|+|++...            
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvm   87 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM   87 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEE
Confidence            4688888 49999999999998764  4557999999643  33456788999999999999985421            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+                   
T Consensus        88 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~-------------------  148 (285)
T d1u59a_          88 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA-------------------  148 (285)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEE-------------------
T ss_pred             EeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCce-------------------
Confidence                           2458999999999999999999999999999999999999877655                   


Q ss_pred             CCCCCCCceeccCCCCccccCC------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  292 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~  292 (405)
                              ||+|||+++.....      .....||+.|+|||++.+..++.++|||||||++|||+| |..||.+.+..+
T Consensus       149 --------Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~  220 (285)
T d1u59a_         149 --------KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE  220 (285)
T ss_dssp             --------EECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH
T ss_pred             --------eeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH
Confidence                    45555554432221      122468999999999999899999999999999999998 999999887766


Q ss_pred             HHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcccc
Q 015532          293 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  372 (405)
Q Consensus       293 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  372 (405)
                      ....+.+.                       .+..                          .+..+++++.+||.+||+.
T Consensus       221 ~~~~i~~~-----------------------~~~~--------------------------~p~~~~~~l~~li~~cl~~  251 (285)
T d1u59a_         221 VMAFIEQG-----------------------KRME--------------------------CPPECPPELYALMSDCWIY  251 (285)
T ss_dssp             HHHHHHTT-----------------------CCCC--------------------------CCTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHHcC-----------------------CCCC--------------------------CCCcCCHHHHHHHHHHcCC
Confidence            65544321                       1111                          1234567899999999999


Q ss_pred             CCCCCCCHHHH---HcCCCCC
Q 015532          373 DPAERLKAREA---LRHPFFT  390 (405)
Q Consensus       373 dP~~Rpta~el---L~hp~f~  390 (405)
                      ||++|||+.++   |+|+|++
T Consensus       252 ~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         252 KWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHHH
Confidence            99999999888   5788874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-46  Score=352.54  Aligned_cols=220  Identities=20%  Similarity=0.285  Sum_probs=170.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc-----EEEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE-----LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~-----~vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~---------  154 (405)
                      ++|++.++||+|+||+||+|++..+++     .||||++...  ......+.+|+.+|.++ +|+|++...         
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            579999999999999999999876543     6999998543  33456788999999999 788874311         


Q ss_pred             -----------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEE
Q 015532          155 -----------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  193 (405)
Q Consensus       155 -----------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIl  193 (405)
                                                               ...+++..++.++.||+.||.|||++|||||||||+|||
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nil  196 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL  196 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccc
Confidence                                                     123788899999999999999999999999999999999


Q ss_pred             EecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhH
Q 015532          194 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDL  268 (405)
Q Consensus       194 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di  268 (405)
                      ++.++.+                           ||+|||+|+......     ....||+.|||||++.+..|+.++||
T Consensus       197 l~~~~~~---------------------------Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~Di  249 (325)
T d1rjba_         197 VTHGKVV---------------------------KICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV  249 (325)
T ss_dssp             EETTTEE---------------------------EECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             cccCCeE---------------------------EEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceec
Confidence            9877655                           455555544322211     23568999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccc
Q 015532          269 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  347 (405)
Q Consensus       269 wSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (405)
                      |||||++|||+| |.+||.+.+..+.+..+.+.-                      .+.+                    
T Consensus       250 wS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~----------------------~~~~--------------------  287 (325)
T d1rjba_         250 WSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG----------------------FKMD--------------------  287 (325)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTT----------------------CCCC--------------------
T ss_pred             cchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC----------------------CCCC--------------------
Confidence            999999999998 899998876655444332211                      0111                    


Q ss_pred             hhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          348 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       348 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                            .+..+++++.+||.+||+.||++|||++||++|
T Consensus       288 ------~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         288 ------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                  123457789999999999999999999999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-46  Score=351.50  Aligned_cols=224  Identities=21%  Similarity=0.263  Sum_probs=170.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCc----EEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      ..|+++++||+|+||+||+|++..+|+    .||||.++..  ....+.+.+|+.++++++|+|++...           
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            359999999999999999999988776    5888887543  23457789999999999999985432           


Q ss_pred             ----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          155 ----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       155 ----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                      ...+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||++........  
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  166 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK--  166 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccc--
Confidence                            24578999999999999999999999999999999999998877655555554432211100  


Q ss_pred             cCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMM  297 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i  297 (405)
                                          ........||+.|+|||++.+..|+.++|||||||++|||+| |.+||.+.+..+....+
T Consensus       167 --------------------~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i  226 (317)
T d1xkka_         167 --------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL  226 (317)
T ss_dssp             ----------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHH
T ss_pred             --------------------cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence                                001112468999999999999999999999999999999998 89999887665544443


Q ss_pred             HHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCC
Q 015532          298 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  377 (405)
Q Consensus       298 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  377 (405)
                      .+..                       +..                          .+..+++.+.+||.+||+.||++|
T Consensus       227 ~~~~-----------------------~~~--------------------------~p~~~~~~~~~li~~cl~~dP~~R  257 (317)
T d1xkka_         227 EKGE-----------------------RLP--------------------------QPPICTIDVYMIMVKCWMIDADSR  257 (317)
T ss_dssp             HHTC-----------------------CCC--------------------------CCTTBCHHHHHHHHHHTCSSGGGS
T ss_pred             HcCC-----------------------CCC--------------------------CCcccCHHHHHHHHHhCCCChhhC
Confidence            3211                       111                          113456789999999999999999


Q ss_pred             CCHHHHHcC
Q 015532          378 LKAREALRH  386 (405)
Q Consensus       378 pta~elL~h  386 (405)
                      ||+.|+++|
T Consensus       258 Ps~~eil~~  266 (317)
T d1xkka_         258 PKFRELIIE  266 (317)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999987

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=346.25  Aligned_cols=216  Identities=25%  Similarity=0.396  Sum_probs=168.8

Q ss_pred             eeeecccceeEEEEEec--CCCcEEEEEEecch---hhhhHHHHHHHHHHHHHhhcCCCCCc------------------
Q 015532           98 SKMGEGTFGQVVECFDN--EKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR------------------  154 (405)
Q Consensus        98 ~~LG~G~fg~V~~a~~~--~~~~~vAiK~~~~~---~~~~~~~~~E~~il~~l~~~~~~~~~------------------  154 (405)
                      ++||+|+||+||+|.+.  .+++.||||+++..   ....+.+.+|+++|++++|+|++...                  
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            47999999999999864  45678999999642   23456789999999999999985422                  


Q ss_pred             --------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCCCCCCC
Q 015532          155 --------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  226 (405)
Q Consensus       155 --------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  226 (405)
                              ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+                          
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~--------------------------  146 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA--------------------------  146 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE--------------------------
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcc--------------------------
Confidence                    2458999999999999999999999999999999999999887755                          


Q ss_pred             ceeccCCCCccccCC------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 015532          227 IKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER  299 (405)
Q Consensus       227 ~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~  299 (405)
                       ||+|||+++.....      .....||+.|+|||++.+..++.++|||||||++|||++ |++||.+.+..+....+.+
T Consensus       147 -kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~  225 (277)
T d1xbba_         147 -KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK  225 (277)
T ss_dssp             -EECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred             -cccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc
Confidence             45555555432211      122468999999999999899999999999999999998 8999998877665554432


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                      .                       .+...                          +..+++++.+||.+||+.||++|||
T Consensus       226 ~-----------------------~~~~~--------------------------p~~~~~~~~~li~~cl~~dp~~RPs  256 (277)
T d1xbba_         226 G-----------------------ERMGC--------------------------PAGCPREMYDLMNLCWTYDVENRPG  256 (277)
T ss_dssp             T-----------------------CCCCC--------------------------CTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             C-----------------------CCCCC--------------------------CcccCHHHHHHHHHHcCCCHhHCcC
Confidence            1                       11111                          1345678999999999999999999


Q ss_pred             HHHH---HcCCCC
Q 015532          380 AREA---LRHPFF  389 (405)
Q Consensus       380 a~el---L~hp~f  389 (405)
                      ++++   |+|+|+
T Consensus       257 ~~~i~~~L~~~~~  269 (277)
T d1xbba_         257 FAAVELRLRNYYY  269 (277)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCHHh
Confidence            9998   456654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=339.53  Aligned_cols=218  Identities=22%  Similarity=0.278  Sum_probs=165.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC----cEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc-----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR-----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~----~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~-----------  154 (405)
                      +.|++.+.||+|+||+||+|.++.++    ..||||+++..  ......+.+|+++|++++|+|++...           
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            46999999999999999999987654    47999998642  33445688999999999999985422           


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++.++..++.||+.||+|||++||+||||||+|||++.++                   
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~-------------------  147 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-------------------  147 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-------------------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCC-------------------
Confidence                             24578999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCCh
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHEN  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg-~~pf~~~~~  290 (405)
                              .+||+|||+++......      ....||+.|+|||++.+..++.++|||||||++|||++| .+||.+.+.
T Consensus       148 --------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~  219 (283)
T d1mqba_         148 --------VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN  219 (283)
T ss_dssp             --------CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             --------eEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH
Confidence                    45666666665432211      124689999999999999999999999999999999995 455555555


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+.+..+...                       .+..                          .+..++..+.+||.+||
T Consensus       220 ~~~~~~i~~~-----------------------~~~~--------------------------~~~~~~~~l~~li~~cl  250 (283)
T d1mqba_         220 HEVMKAINDG-----------------------FRLP--------------------------TPMDCPSAIYQLMMQCW  250 (283)
T ss_dssp             HHHHHHHHTT-----------------------CCCC--------------------------CCTTCBHHHHHHHHHHT
T ss_pred             HHHHHHHhcc-----------------------CCCC--------------------------CchhhHHHHHHHHHHHC
Confidence            4444333211                       0111                          11235678999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 015532          371 RYDPAERLKAREALR  385 (405)
Q Consensus       371 ~~dP~~Rpta~elL~  385 (405)
                      +.||++|||+.|+++
T Consensus       251 ~~~p~~RPt~~eil~  265 (283)
T d1mqba_         251 QQERARRPKFADIVS  265 (283)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             cCCHhHCcCHHHHHH
Confidence            999999999999986

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-46  Score=341.69  Aligned_cols=219  Identities=24%  Similarity=0.320  Sum_probs=169.3

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC---cEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~---~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~------------  154 (405)
                      ++|++.+.||+|+||+||+|++..++   ..||||+++..  ....+.+.+|+.+|++++|+|++...            
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~   86 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM   86 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEE
Confidence            57999999999999999999986543   56899988643  33456788999999999999985422            


Q ss_pred             ---------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCccc
Q 015532          155 ---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  219 (405)
Q Consensus       155 ---------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  219 (405)
                                     ...+++..++.++.||+.||.|||++||+||||||+||+++.++.                    
T Consensus        87 E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~--------------------  146 (273)
T d1mp8a_          87 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC--------------------  146 (273)
T ss_dssp             ECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--------------------
T ss_pred             EeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCc--------------------
Confidence                           235789999999999999999999999999999999999987665                    


Q ss_pred             CCCCCCCceeccCCCCccccCC----ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015532          220 NLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  294 (405)
Q Consensus       220 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~  294 (405)
                             +||+|||+++.....    .....||+.|+|||++.+..|+.++|||||||++|||++ |.+||.+.+..+..
T Consensus       147 -------~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~  219 (273)
T d1mp8a_         147 -------VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI  219 (273)
T ss_dssp             -------EEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred             -------EEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHH
Confidence                   455555555443221    123468999999999999999999999999999999998 89999887776655


Q ss_pred             HHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCC
Q 015532          295 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  374 (405)
Q Consensus       295 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  374 (405)
                      ..+....                       +.                          ..+..+++++.+||.+||+.||
T Consensus       220 ~~i~~~~-----------------------~~--------------------------~~~~~~~~~~~~li~~cl~~dp  250 (273)
T d1mp8a_         220 GRIENGE-----------------------RL--------------------------PMPPNCPPTLYSLMTKCWAYDP  250 (273)
T ss_dssp             HHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHcCC-----------------------CC--------------------------CCCCCCCHHHHHHHHHHcCCCH
Confidence            5443210                       11                          1123457789999999999999


Q ss_pred             CCCCCHHHHHcC
Q 015532          375 AERLKAREALRH  386 (405)
Q Consensus       375 ~~Rpta~elL~h  386 (405)
                      ++|||++||++|
T Consensus       251 ~~Rps~~ei~~~  262 (273)
T d1mp8a_         251 SRRPRFTELKAQ  262 (273)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-45  Score=341.14  Aligned_cols=220  Identities=23%  Similarity=0.323  Sum_probs=163.4

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++|++.++||+|+||.||+|++..     +++.||||+++..  ....+.+..|+.++.++.||+++...          
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   92 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   92 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence            579999999999999999999754     4578999998643  23455677899999998766531110          


Q ss_pred             -----------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccc
Q 015532          155 -----------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  199 (405)
Q Consensus       155 -----------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~  199 (405)
                                                         ...+++.++..++.||+.||.|||++|||||||||+|||++.++.
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~  172 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV  172 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCc
Confidence                                               123788999999999999999999999999999999999987665


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHHH
Q 015532          200 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI  274 (405)
Q Consensus       200 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  274 (405)
                      +                           ||+|||+|+.....     .....||+.|+|||++.+..++.++|||||||+
T Consensus       173 ~---------------------------Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvi  225 (299)
T d1ywna1         173 V---------------------------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL  225 (299)
T ss_dssp             E---------------------------EECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             E---------------------------EEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHH
Confidence            5                           55555555432211     123579999999999999999999999999999


Q ss_pred             HHHHHhC-CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhh
Q 015532          275 LVELCSG-EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ  353 (405)
Q Consensus       275 l~~lltg-~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (405)
                      +|||++| .+||.+....+.+..+...                      +.+.                          .
T Consensus       226 l~ellt~~~~p~~~~~~~~~~~~~~~~----------------------~~~~--------------------------~  257 (299)
T d1ywna1         226 LWEIFSLGASPYPGVKIDEEFCRRLKE----------------------GTRM--------------------------R  257 (299)
T ss_dssp             HHHHHTTSCCSSTTCCCSHHHHHHHHH----------------------TCCC--------------------------C
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhc----------------------CCCC--------------------------C
Confidence            9999986 5788776544433322211                      0011                          1


Q ss_pred             cccCchHHHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          354 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       354 ~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      .++..++++.+||.+||+.||++|||++|+++|
T Consensus       258 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         258 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            123457789999999999999999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-45  Score=333.71  Aligned_cols=219  Identities=20%  Similarity=0.297  Sum_probs=166.8

Q ss_pred             CCeEEEeeeecccceeEEEEEecCC-C--cEEEEEEecch----hhhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEK-K--ELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~-~--~~vAiK~~~~~----~~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++|++++.||+|+||.||+|++... +  ..||||+++..    ....+.+.+|+.+|++++|+|++...          
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            4699999999999999999986533 2  46899998642    23456788999999999999985422          


Q ss_pred             -----------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCc
Q 015532          155 -----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  217 (405)
Q Consensus       155 -----------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  217 (405)
                                       ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                  
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~------------------  149 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL------------------  149 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE------------------
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccc------------------
Confidence                             245899999999999999999999999999999999999987664                  


Q ss_pred             ccCCCCCCCceeccCCCCccccCCc------cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 015532          218 FKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  290 (405)
Q Consensus       218 ~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~  290 (405)
                               +||+|||+++......      ....||..|+|||++.+..++.++|||||||++|||+| |..||.+.+.
T Consensus       150 ---------vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~  220 (273)
T d1u46a_         150 ---------VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG  220 (273)
T ss_dssp             ---------EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             ---------eeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH
Confidence                     5666666655432221      22467889999999999999999999999999999998 8999999888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHcc
Q 015532          291 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  370 (405)
Q Consensus       291 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  370 (405)
                      .+.+..+.+..-.                      .                          .....+++.+.+||.+||
T Consensus       221 ~~~~~~i~~~~~~----------------------~--------------------------~~~~~~~~~l~~li~~cl  252 (273)
T d1u46a_         221 SQILHKIDKEGER----------------------L--------------------------PRPEDCPQDIYNVMVQCW  252 (273)
T ss_dssp             HHHHHHHHTSCCC----------------------C--------------------------CCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCC----------------------C--------------------------CCcccccHHHHHHHHHHc
Confidence            7776655331100                      0                          112345678999999999


Q ss_pred             ccCCCCCCCHHHHHc
Q 015532          371 RYDPAERLKAREALR  385 (405)
Q Consensus       371 ~~dP~~Rpta~elL~  385 (405)
                      ..||++|||+.||++
T Consensus       253 ~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         253 AHKPEDRPTFVALRD  267 (273)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.6e-45  Score=338.34  Aligned_cols=219  Identities=19%  Similarity=0.253  Sum_probs=172.7

Q ss_pred             CCCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecch--hhhhHHHHHHHHHHHHHhhcCCCCCc---------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR---------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~il~~l~~~~~~~~~---------  154 (405)
                      .++|++.+.||+|+||+||+|+++.     +++.||||+++..  ....+.+.+|+++|+.++|+++....         
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~   91 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM   91 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence            3579999999999999999999753     5678999999643  23456789999999999999984321         


Q ss_pred             ------------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcE
Q 015532          155 ------------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  192 (405)
Q Consensus       155 ------------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  192 (405)
                                                                ...+++..+..++.||+.||+|||++|||||||||+||
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NI  171 (301)
T d1lufa_          92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC  171 (301)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccce
Confidence                                                      12378889999999999999999999999999999999


Q ss_pred             EEecccccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccC-----CccceecCCCcchhHHHhCCCCCCchh
Q 015532          193 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCD  267 (405)
Q Consensus       193 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~D  267 (405)
                      |++.++.                           +||+|||+++....     ......||+.|+|||++.+..|+.++|
T Consensus       172 Lld~~~~---------------------------~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksD  224 (301)
T d1lufa_         172 LVGENMV---------------------------VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD  224 (301)
T ss_dssp             EECGGGC---------------------------EEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             EECCCCc---------------------------EEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhh
Confidence            9987654                           56666666543221     112357889999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhcc
Q 015532          268 LWSVGCILVELCSGE-ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  346 (405)
Q Consensus       268 iwSlG~il~~lltg~-~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (405)
                      ||||||++|||++|. +||.+.+..+.+..+...  ..                     .                    
T Consensus       225 VwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~--~~---------------------~--------------------  261 (301)
T d1lufa_         225 VWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG--NI---------------------L--------------------  261 (301)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CC---------------------C--------------------
T ss_pred             hccchhhHHHHHccCCCCCCCCCHHHHHHHHHcC--CC---------------------C--------------------
Confidence            999999999999984 788888777766544321  11                     1                    


Q ss_pred             chhhhhhcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          347 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       347 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                            ..+..+++++.+||.+||+.||++|||+.||++
T Consensus       262 ------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         262 ------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                  112345678999999999999999999999975

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=329.93  Aligned_cols=216  Identities=20%  Similarity=0.314  Sum_probs=168.5

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc-----------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-----------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~-----------------  154 (405)
                      ++|++.++||+|+||.||+|+++  |..||||+++.. ...+.+.+|++++++++|+|++...                 
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            46999999999999999999984  678999999754 3457789999999999999985422                 


Q ss_pred             -------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccCC
Q 015532          155 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  221 (405)
Q Consensus       155 -------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  221 (405)
                                   ...+++..++.++.||+.||.|||+++|+||||||+|||++.++                       
T Consensus        84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~-----------------------  140 (262)
T d1byga_          84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------------------  140 (262)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-----------------------
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCC-----------------------
Confidence                         12378899999999999999999999999999999999997654                       


Q ss_pred             CCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 015532          222 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV  300 (405)
Q Consensus       222 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~llt-g~~pf~~~~~~~~~~~i~~~  300 (405)
                          .+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||+| |.+||...+..+....+.. 
T Consensus       141 ----~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~-  215 (262)
T d1byga_         141 ----VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-  215 (262)
T ss_dssp             ----CEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-
T ss_pred             ----CEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-
Confidence                5677777777766555556678999999999999999999999999999999998 7999987766555444321 


Q ss_pred             hCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCCH
Q 015532          301 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  380 (405)
Q Consensus       301 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  380 (405)
                                            +.+..                          .+...++++.+||.+||..||++|||+
T Consensus       216 ----------------------~~~~~--------------------------~~~~~~~~~~~li~~cl~~dP~~Rps~  247 (262)
T d1byga_         216 ----------------------GYKMD--------------------------APDGCPPAVYEVMKNCWHLDAAMRPSF  247 (262)
T ss_dssp             ----------------------TCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             ----------------------CCCCC--------------------------CCccCCHHHHHHHHHHcccCHhHCcCH
Confidence                                  11111                          123456789999999999999999999


Q ss_pred             HHHHcC
Q 015532          381 REALRH  386 (405)
Q Consensus       381 ~elL~h  386 (405)
                      .+++++
T Consensus       248 ~~l~~~  253 (262)
T d1byga_         248 LQLREQ  253 (262)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999873

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1e-43  Score=329.28  Aligned_cols=229  Identities=18%  Similarity=0.203  Sum_probs=174.5

Q ss_pred             ccCCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc--------------
Q 015532           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR--------------  154 (405)
Q Consensus        89 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~--------------  154 (405)
                      .+.++|++.++||+|+||+||+|++..+|+.||||++.... ..+.+.+|+++++.|.|++.....              
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            35678999999999999999999999999999999986533 234567899999999885542211              


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.|++.||+|||++||+||||||+|||++....                     
T Consensus        81 e~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~---------------------  139 (293)
T d1csna_          81 DLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS---------------------  139 (293)
T ss_dssp             ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS---------------------
T ss_pred             EecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCccc---------------------
Confidence                          246889999999999999999999999999999999999975321                     


Q ss_pred             CCCCCCceeccCCCCccccCC----------ccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh
Q 015532          221 LPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  290 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~  290 (405)
                       .....++|+|||+|+.....          ....+||+.|||||++.+..++.++|||||||++|||++|..||.+...
T Consensus       140 -~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~  218 (293)
T d1csna_         140 -KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  218 (293)
T ss_dssp             -TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred             -ccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccc
Confidence             12345788888887653321          2235799999999999999999999999999999999999999986543


Q ss_pred             HHH---HHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHH
Q 015532          291 LEH---LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  367 (405)
Q Consensus       291 ~~~---~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  367 (405)
                      ...   ...+....-                                             .....+....+++++.+++.
T Consensus       219 ~~~~~~~~~i~~~~~---------------------------------------------~~~~~~l~~~~p~~l~~ii~  253 (293)
T d1csna_         219 ATNKQKYERIGEKKQ---------------------------------------------STPLRELCAGFPEEFYKYMH  253 (293)
T ss_dssp             CCHHHHHHHHHHHHH---------------------------------------------HSCHHHHTTTSCHHHHHHHH
T ss_pred             hhHHHHHHHHHhccC---------------------------------------------CCChHHhcCCCCHHHHHHHH
Confidence            222   222211100                                             00011112345678999999


Q ss_pred             HccccCCCCCCCHHHHHc
Q 015532          368 GLLRYDPAERLKAREALR  385 (405)
Q Consensus       368 ~~L~~dP~~Rpta~elL~  385 (405)
                      .|+..+|++||+.+.+.+
T Consensus       254 ~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         254 YARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHHCCTTCCCCHHHHHH
T ss_pred             HHhcCCcccCcCHHHHHH
Confidence            999999999998776543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-43  Score=328.63  Aligned_cols=218  Identities=20%  Similarity=0.314  Sum_probs=167.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCC-------cEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc-------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKK-------ELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR-------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~-------~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~-------  154 (405)
                      ++|++.+.||+|+||.||+|++..++       ..||||+++...  .....+.+|...+.++ .|++++...       
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            67999999999999999999986554       479999996533  3456788899999999 688874321       


Q ss_pred             ------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 ------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 ------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                                          ...+++.+++.++.||+.||+|||++|||||||||+|||++.++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~  172 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  172 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCC
Confidence                                                13479999999999999999999999999999999999997766


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCC-----ccceecCCCcchhHHHhCCCCCCchhHHHHHH
Q 015532          199 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  273 (405)
Q Consensus       199 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  273 (405)
                      .                           +||+|||++......     .....||+.|+|||.+.+..|+.++|||||||
T Consensus       173 ~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gv  225 (299)
T d1fgka_         173 V---------------------------MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV  225 (299)
T ss_dssp             C---------------------------EEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHH
T ss_pred             C---------------------------eEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHH
Confidence            4                           555666655433222     12257899999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhh
Q 015532          274 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  352 (405)
Q Consensus       274 il~~llt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (405)
                      ++|||++ |.+||.+.+..+....+...                       .+..                         
T Consensus       226 vl~ell~~g~~p~~~~~~~~~~~~i~~~-----------------------~~~~-------------------------  257 (299)
T d1fgka_         226 LLWEIFTLGGSPYPGVPVEELFKLLKEG-----------------------HRMD-------------------------  257 (299)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTT-----------------------CCCC-------------------------
T ss_pred             HHHHhccCCCCCCCCCCHHHHHHHHHcC-----------------------CCCC-------------------------
Confidence            9999998 79999887766554433221                       0111                         


Q ss_pred             hcccCchHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          353 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       353 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                       .+..+++++.+||.+||+.||++|||+.||++
T Consensus       258 -~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         258 -KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             -CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence             12345678999999999999999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=331.27  Aligned_cols=224  Identities=21%  Similarity=0.326  Sum_probs=178.0

Q ss_pred             CCeEEEeeeecccceeEEEEEecC-----CCcEEEEEEecchh--hhhHHHHHHHHHHHHHhhcCCCCCc----------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTR----------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l~~~~~~~~~----------  154 (405)
                      ++|++.++||+|+||+||+|.++.     ++..||||+++...  .....+.+|+++++++.|++++...          
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            689999999999999999998853     35789999997532  3345678999999999999985422          


Q ss_pred             ---------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccc
Q 015532          155 ---------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  207 (405)
Q Consensus       155 ---------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~  207 (405)
                                                 ...+++..+..++.||+.||.|||+++|+||||||+|||++.++         
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~---------  170 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF---------  170 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC---------
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCc---------
Confidence                                       12357788899999999999999999999999999999997654         


Q ss_pred             cccCCCCCCcccCCCCCCCceeccCCCCccccCCc-----cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC-
Q 015532          208 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-  281 (405)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg-  281 (405)
                                        .+||+|||+++......     ....||+.|+|||.+.+..++.++|||||||++|||+|| 
T Consensus       171 ------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~  232 (308)
T d1p4oa_         171 ------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA  232 (308)
T ss_dssp             ------------------CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred             ------------------eEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCC
Confidence                              56777777775443221     224789999999999999999999999999999999998 


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHH
Q 015532          282 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  361 (405)
Q Consensus       282 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
                      .+||.+.+..+.+..+.+.  .                     ..+                          .+..+++.
T Consensus       233 ~~p~~~~~~~~~~~~i~~~--~---------------------~~~--------------------------~p~~~~~~  263 (308)
T d1p4oa_         233 EQPYQGLSNEQVLRFVMEG--G---------------------LLD--------------------------KPDNCPDM  263 (308)
T ss_dssp             CCTTTTSCHHHHHHHHHTT--C---------------------CCC--------------------------CCTTCCHH
T ss_pred             CCCCCCCCHHHHHHHHHhC--C---------------------CCC--------------------------CcccchHH
Confidence            5888887776666544321  0                     111                          11245678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHc------CCCCCC
Q 015532          362 LIDLLQGLLRYDPAERLKAREALR------HPFFTR  391 (405)
Q Consensus       362 l~~ll~~~L~~dP~~Rpta~elL~------hp~f~~  391 (405)
                      +.+||.+||+.||++|||++|+++      +|+|++
T Consensus       264 l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         264 LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            999999999999999999999997      777653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-43  Score=330.20  Aligned_cols=219  Identities=21%  Similarity=0.247  Sum_probs=169.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcE--EEEEEecch--hhhhHHHHHHHHHHHHH-hhcCCCCCc------------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTR------------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~--vAiK~~~~~--~~~~~~~~~E~~il~~l-~~~~~~~~~------------  154 (405)
                      ++|++.++||+|+||+||+|+++.++..  ||||.++..  ....+.+.+|+++|.++ +|+||+...            
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            5699999999999999999999888764  677877532  23455688999999998 688884321            


Q ss_pred             -------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccC
Q 015532          155 -------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  203 (405)
Q Consensus       155 -------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~  203 (405)
                                                     ...+++..+..++.||+.||.|||++||+||||||+|||++.++     
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~-----  164 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY-----  164 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG-----
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC-----
Confidence                                           14578899999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCceeccCCCCccccCCc--cceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhC
Q 015532          204 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  281 (405)
Q Consensus       204 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg  281 (405)
                                            .+||+|||++.......  ....||..|+|||.+.+..|+.++|||||||++|||++|
T Consensus       165 ----------------------~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~  222 (309)
T d1fvra_         165 ----------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL  222 (309)
T ss_dssp             ----------------------CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             ----------------------ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhc
Confidence                                  45666666665433222  234689999999999999999999999999999999996


Q ss_pred             -CCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchH
Q 015532          282 -EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  360 (405)
Q Consensus       282 -~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (405)
                       .+||.+.+..+....+.+.                       .+..                          .+..+++
T Consensus       223 ~~~p~~~~~~~~~~~~i~~~-----------------------~~~~--------------------------~~~~~~~  253 (309)
T d1fvra_         223 GGTPYCGMTCAELYEKLPQG-----------------------YRLE--------------------------KPLNCDD  253 (309)
T ss_dssp             SCCTTTTCCHHHHHHHGGGT-----------------------CCCC--------------------------CCTTBCH
T ss_pred             CCCCCCCCCHHHHHHHHHhc-----------------------CCCC--------------------------CCccCCH
Confidence             4678877766654433211                       0111                          1234577


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHcC
Q 015532          361 DLIDLLQGLLRYDPAERLKAREALRH  386 (405)
Q Consensus       361 ~l~~ll~~~L~~dP~~Rpta~elL~h  386 (405)
                      ++.+||.+||+.||++|||++||++|
T Consensus       254 ~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         254 EVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            89999999999999999999999976

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=323.75  Aligned_cols=224  Identities=24%  Similarity=0.353  Sum_probs=170.6

Q ss_pred             CCeEEEeeeecccceeEEEEEec-----CCCcEEEEEEecchh--hhhHHHHHHHHHHHHH-hhcCCCCCc---------
Q 015532           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTR---------  154 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~il~~l-~~~~~~~~~---------  154 (405)
                      ++|++.++||+|+||.||+|++.     .+++.||||+++...  .....+.+|+.+++++ +|++++...         
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            67999999999999999999863     456789999996432  3455688999999999 588874321         


Q ss_pred             ------------------------------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEeccc
Q 015532          155 ------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  198 (405)
Q Consensus       155 ------------------------------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~  198 (405)
                                                          ...+++..+..++.||+.||.|||++|||||||||+|||++.++
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~  182 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR  182 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccC
Confidence                                                12478899999999999999999999999999999999998877


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHH
Q 015532          199 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  278 (405)
Q Consensus       199 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  278 (405)
                      .+|++|||++........                      ........||+.|+|||++.+..++.++|||||||++|||
T Consensus       183 ~~ki~DfG~~~~~~~~~~----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~el  240 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSN----------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL  240 (311)
T ss_dssp             EEEECCCGGGSCTTSCTT----------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccchheeccCCCc----------------------ceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHH
Confidence            666666554432211000                      0001224789999999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccC
Q 015532          279 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  357 (405)
Q Consensus       279 lt-g~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (405)
                      +| |.+||.+.+..+.+..+.+.-.                      +.                          .....
T Consensus       241 lt~g~p~~~~~~~~~~~~~~i~~~~----------------------~~--------------------------~~~~~  272 (311)
T d1t46a_         241 FSLGSSPYPGMPVDSKFYKMIKEGF----------------------RM--------------------------LSPEH  272 (311)
T ss_dssp             HTTTCCSSTTCCSSHHHHHHHHHTC----------------------CC--------------------------CCCTT
T ss_pred             HhCCCCCCCCCCHHHHHHHHHhcCC----------------------CC--------------------------CCccc
Confidence            98 7777777665554443322110                      00                          11123


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHHc
Q 015532          358 SAGDLIDLLQGLLRYDPAERLKAREALR  385 (405)
Q Consensus       358 ~~~~l~~ll~~~L~~dP~~Rpta~elL~  385 (405)
                      .++.+.+||.+||+.||++|||++||++
T Consensus       273 ~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         273 APAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            4678999999999999999999999985

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-42  Score=319.30  Aligned_cols=229  Identities=17%  Similarity=0.177  Sum_probs=167.1

Q ss_pred             EEEeeeecccceeEEEEEecCCC---cEEEEEEecc--hhhhhHHHHHHHHHHHHHhhcCCCCCc---------------
Q 015532           95 RILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR---------------  154 (405)
Q Consensus        95 ~~~~~LG~G~fg~V~~a~~~~~~---~~vAiK~~~~--~~~~~~~~~~E~~il~~l~~~~~~~~~---------------  154 (405)
                      ...++||+|+||+||+|++..++   ..||||+++.  .....+.+.+|+++|.+++|+|++...               
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            33678999999999999986543   3699999964  334457789999999999999986543               


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcccC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  220 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  220 (405)
                                    ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||++........    
T Consensus       110 ~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~----  185 (311)
T d1r0pa_         110 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF----  185 (311)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC----
T ss_pred             EeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccccc----
Confidence                          12356778899999999999999999999999999999998777666666655432211110    


Q ss_pred             CCCCCCceeccCCCCccccCCccceecCCCcchhHHHhCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH
Q 015532          221 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL-EHLAMMER  299 (405)
Q Consensus       221 ~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~lltg~~pf~~~~~~-~~~~~i~~  299 (405)
                                      ..........||..|+|||.+.+..++.++|||||||++|||++|..||...... +....+. 
T Consensus       186 ----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~-  248 (311)
T d1r0pa_         186 ----------------DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-  248 (311)
T ss_dssp             ----------------CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHH-
T ss_pred             ----------------ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHH-
Confidence                            0001112246899999999999999999999999999999999977777553322 2221111 


Q ss_pred             HhCCCChHHHHHhhHhhHHhhhcCCcccCCCCCCchhhHHHHHHhccchhhhhhcccCchHHHHHHHHHccccCCCCCCC
Q 015532          300 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  379 (405)
Q Consensus       300 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  379 (405)
                                            .+.+..                          .+..+++.+.+||.+||+.||++|||
T Consensus       249 ----------------------~g~~~~--------------------------~p~~~~~~l~~li~~cl~~dP~~RPs  280 (311)
T d1r0pa_         249 ----------------------QGRRLL--------------------------QPEYCPDPLYEVMLKCWHPKAEMRPS  280 (311)
T ss_dssp             ----------------------TTCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ----------------------cCCCCC--------------------------CcccCcHHHHHHHHHHcCCCHhHCcC
Confidence                                  111111                          11234678999999999999999999


Q ss_pred             HHHHHcC------CCCCCC
Q 015532          380 AREALRH------PFFTRD  392 (405)
Q Consensus       380 a~elL~h------p~f~~~  392 (405)
                      +.|+++|      .|+.+.
T Consensus       281 ~~ei~~~L~~i~~~~~~~~  299 (311)
T d1r0pa_         281 FSELVSRISAIFSTFIGEH  299 (311)
T ss_dssp             HHHHHHHHHHHHHTCCSCC
T ss_pred             HHHHHHHHHHHHHhhhhhh
Confidence            9999988      766654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-41  Score=315.92  Aligned_cols=168  Identities=23%  Similarity=0.237  Sum_probs=130.5

Q ss_pred             CCCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCCCCCc----------------
Q 015532           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR----------------  154 (405)
Q Consensus        91 ~~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~~~~~----------------  154 (405)
                      ...|.+.++||+|+||.||+|++  +|+.||||+++...........|+..+..++|+|++...                
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            35689999999999999999986  588999999976544333334455566678999985421                


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHH--------CCcEecCCCCCcEEEecccccccCCccccccCC
Q 015532          155 --------------YRSFPIDLVRELGRQLLESVAFMHE--------LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  212 (405)
Q Consensus       155 --------------~~~l~~~~~~~~~~qi~~aL~~LH~--------~givHrDlkp~NIli~~~~~~k~~df~~~~~~~  212 (405)
                                    ...+++..+..++.|++.||.|||+        +|||||||||+|||++.++              
T Consensus        80 ~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~--------------  145 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--------------  145 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTS--------------
T ss_pred             EecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCC--------------
Confidence                          1356889999999999999999996        5999999999999997665              


Q ss_pred             CCCCcccCCCCCCCceeccCCCCccccCC-------ccceecCCCcchhHHHhCCC------CCCchhHHHHHHHHHHHH
Q 015532          213 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLG------WNYPCDLWSVGCILVELC  279 (405)
Q Consensus       213 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~~ll  279 (405)
                                   .+||+|||++......       .....||+.|+|||++.+..      ++.++|||||||++|||+
T Consensus       146 -------------~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~  212 (303)
T d1vjya_         146 -------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA  212 (303)
T ss_dssp             -------------CEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------CeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHh
Confidence                         4566666665443221       12357999999999997643      567899999999999999


Q ss_pred             hCCCCCCC
Q 015532          280 SGEALFQT  287 (405)
Q Consensus       280 tg~~pf~~  287 (405)
                      ||..||..
T Consensus       213 tg~~~~~~  220 (303)
T d1vjya_         213 RRCSIGGI  220 (303)
T ss_dssp             HTBCBTTB
T ss_pred             hCCCCCCc
Confidence            99988754

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.90  E-value=1.7e-24  Score=186.66  Aligned_cols=147  Identities=20%  Similarity=0.182  Sum_probs=105.9

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-------------------hhhHHHHHHHHHHHHHhhcCCCCC-
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------------------KYREAAMIEIDVLQRLARHDIGGT-  153 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------------------~~~~~~~~E~~il~~l~~~~~~~~-  153 (405)
                      |.+.++||+|+||+||+|++. +|+.||||+++...                   ........|..++.++.+.++... 
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            567899999999999999984 68899999875211                   112334468888888888765331 


Q ss_pred             ---------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCCCcEEEecccccccCCccccccCCCCCCcc
Q 015532          154 ---------------RYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  218 (405)
Q Consensus       154 ---------------~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  218 (405)
                                     ....+++..+..++.||+.+|.|||++||+||||||+|||++..+                    
T Consensus        81 ~~~~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~--------------------  140 (191)
T d1zara2          81 AWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG--------------------  140 (191)
T ss_dssp             EEETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE--------------------
T ss_pred             EecCCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC--------------------
Confidence                           123466778889999999999999999999999999999997543                    


Q ss_pred             cCCCCCCCceeccCCCCccccCCccceecCCCcchh------HHHhCCCCCCchhHHHHHHHH
Q 015532          219 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAP------EVILGLGWNYPCDLWSVGCIL  275 (405)
Q Consensus       219 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aP------E~~~~~~~~~~~DiwSlG~il  275 (405)
                              ++|+|||.|.........     .|...      +. ....|+.++|+||+.--+
T Consensus       141 --------~~liDFG~a~~~~~~~~~-----~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         141 --------IWIIDFPQSVEVGEEGWR-----EILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             --------EEECCCTTCEETTSTTHH-----HHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             --------EEEEECCCcccCCCCCcH-----HHHHHHHHHHHHH-HcCCCCCcccHHHHHHHH
Confidence                    688899988655432211     11111      11 234688999999976443

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.001  Score=59.58  Aligned_cols=44  Identities=16%  Similarity=0.220  Sum_probs=34.6

Q ss_pred             eeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532          106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus       106 g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      ..||++.. .+|+.|++|+.+......+++..|+..+..|....+
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gi   79 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEV   79 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence            58999987 467779999987655556777889999999987654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.82  E-value=0.0023  Score=56.76  Aligned_cols=54  Identities=11%  Similarity=0.124  Sum_probs=33.7

Q ss_pred             eEEEeeeecccceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        94 y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      ..-.+.|..|---+.|+.... +|+ +++|++.... ..+....|++++..|....+
T Consensus        20 ~~~~~~i~~G~~N~ny~v~t~-~g~-yVLri~~~~~-~~~~l~~~~~~l~~L~~~g~   73 (316)
T d2ppqa1          20 LTSYKGIAEGVENSNFLLHTT-KDP-LILTLYEKRV-EKNDLPFFLGLMQHLAAKGL   73 (316)
T ss_dssp             EEEEEEECC---EEEEEEEES-SCC-EEEEEECC----CCHHHHHHHHHHHHHHTTC
T ss_pred             ceEeecCCCCcccCeEEEEEC-CCc-EEEEEcCCCC-CHHHHHHHHHHHHhhhhccc
Confidence            344456777877889998764 344 7899986532 23445668888888887654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.76  E-value=0.0033  Score=53.92  Aligned_cols=54  Identities=17%  Similarity=0.131  Sum_probs=35.6

Q ss_pred             CCeEEEeeeecccceeEEEEEecCCCcEEEEEEecchh-hhhHHHHHHHHHHHHHhh
Q 015532           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        92 ~~y~~~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~il~~l~~  147 (405)
                      ..|++.+..+-++.+.||+...  +++.+.||+..... .......+|..++..+..
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~   68 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG   68 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT
T ss_pred             hceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc
Confidence            4677777665556678998863  45567788875432 233446678888888754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.22  E-value=0.0061  Score=55.86  Aligned_cols=51  Identities=24%  Similarity=0.345  Sum_probs=33.4

Q ss_pred             EeeeecccceeEEEEEecCCCcEEEEEEecc----h----hhhhHHHHHHHHHHHHHhh
Q 015532           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRS----I----NKYREAAMIEIDVLQRLAR  147 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~~~~----~----~~~~~~~~~E~~il~~l~~  147 (405)
                      .+.||.|....||++.+..+++.|+||.-..    .    ....++...|..+|+.+..
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~   89 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGE   89 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhh
Confidence            4579999999999999877788899996421    1    1122345668888887754

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.98  E-value=0.055  Score=49.15  Aligned_cols=53  Identities=13%  Similarity=0.206  Sum_probs=37.5

Q ss_pred             EeeeecccceeEEEEEecC-------CCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           97 LSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        97 ~~~LG~G~fg~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      ++.|+-|-.-.+|++....       ..+.|.+++.-... ......+|..+++.+...++
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-~~idr~~E~~i~~~ls~~gl  106 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHL  106 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHTTS
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc-hhhHHHHHHHHHHHHHhCCC
Confidence            4678889999999998653       24567777765322 23345679999999887765

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.90  E-value=0.0082  Score=50.97  Aligned_cols=49  Identities=16%  Similarity=0.036  Sum_probs=31.6

Q ss_pred             eeeccc-ceeEEEEEecCCCcEEEEEEecchhhhhHHHHHHHHHHHHHhhcCC
Q 015532           99 KMGEGT-FGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI  150 (405)
Q Consensus        99 ~LG~G~-fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~E~~il~~l~~~~~  150 (405)
                      .+..|. -+.||+... .++..+.+|......  ...+..|...++.|....+
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gv   66 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGV   66 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTC
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCC
Confidence            444554 367898876 455567889765432  2346678888888876544