Citrus Sinensis ID: 015550
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 405 | 2.2.26 [Sep-21-2011] | |||||||
| B7KWT4 | 260 | Putative aminoacrylate hy | yes | no | 0.520 | 0.811 | 0.272 | 7e-11 | |
| O06420 | 262 | Putative non-heme bromope | yes | no | 0.538 | 0.832 | 0.280 | 4e-10 | |
| Q6Q2C2 | 555 | Bifunctional epoxide hydr | yes | no | 0.279 | 0.203 | 0.294 | 5e-10 | |
| B0SW62 | 268 | Putative aminoacrylate hy | yes | no | 0.604 | 0.914 | 0.269 | 1e-09 | |
| P34913 | 555 | Bifunctional epoxide hydr | yes | no | 0.276 | 0.201 | 0.296 | 2e-09 | |
| B1ZB18 | 260 | Putative aminoacrylate hy | yes | no | 0.592 | 0.923 | 0.246 | 3e-09 | |
| C7CM33 | 260 | Putative aminoacrylate hy | yes | no | 0.528 | 0.823 | 0.255 | 3e-09 | |
| P27747 | 374 | Dihydrolipoyllysine-resid | no | no | 0.288 | 0.312 | 0.345 | 7e-09 | |
| A8IAD8 | 265 | Putative aminoacrylate hy | no | no | 0.264 | 0.403 | 0.300 | 1e-08 | |
| P34914 | 554 | Bifunctional epoxide hydr | yes | no | 0.279 | 0.203 | 0.286 | 2e-08 |
| >sp|B7KWT4|RUTD_METC4 Putative aminoacrylate hydrolase RutD OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
V +D+RG GRS P++ + MA+DV+AL+DHLG A + GH++G +IA +LA
Sbjct: 42 FRVVTYDHRGTGRSPSPLEPG-HDIAAMARDVLALLDHLGIGTADIVGHALGGLIALQLA 100
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PERV + ++N G+ + + R PE Y +L
Sbjct: 101 LTHPERVGRIVVIN----GWAAMDPATRRCFAARKALLRHAGPEAFVRAQAIFLYPAPWL 156
Query: 206 EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265
E ++A Q+ F G A + ++T ++T + L
Sbjct: 157 SENAAR--------------VAADEAQALAHFPGTRTA--LARITA--LETFDATAALGR 198
Query: 266 VIH------GRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLI 318
+ H R DV+ + LA L P AR+ P GGH S R E N+ L+D +
Sbjct: 199 IPHETLLMAARDDVLVPFTASDVLAAGL-PNARLDLAPEGGHAHSVTRPEAFNRTLLDFL 257
Query: 319 KA 320
+
Sbjct: 258 AS 259
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) (taxid: 440085) EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: - |
| >sp|O06420|BPOC_MYCTU Putative non-heme bromoperoxidase BpoC OS=Mycobacterium tuberculosis GN=bpoC PE=1 SV=1 | Back alignment and function description |
|---|
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 102/242 (42%), Gaps = 24/242 (9%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG FDNRG+G + +TT+ M D AL++ L A V G SMGA IA
Sbjct: 38 AAGYRCITFDNRGIGATE---NAEGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQ 94
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF-RAKTPEKRAAVDLDTHYS 201
+L + PE V S L+ G +LD A +FF +A+ + V L Y
Sbjct: 95 ELMVVAPELVSSAVLMATRG-------RLDR-----ARQFFNKAEAELYDSGVQLPPTYD 142
Query: 202 --QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
LE + + + +++ S ++S G Q+ T + + R+
Sbjct: 143 ARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA---PQTNR-LPAYRN 198
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLI 318
V VI DV+ R +A+ L P R + +P GHL ER E VN A++
Sbjct: 199 IAAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFF 257
Query: 319 KA 320
+
Sbjct: 258 AS 259
|
Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 |
| >sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
G+++ + G GP V L G + +W Q+ LA
Sbjct: 247 GVRLHFVEMGSGPA-VCLCHGFPESWFSWRYQIPALAQ---------------------- 283
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V A D +G G SS P + EY+ +++ KD++ ++ LG QA GH G ++
Sbjct: 284 AGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWN 343
Query: 144 LAAMVPERVLSLALLN 159
+A PERV ++A LN
Sbjct: 344 MALFYPERVRAVASLN 359
|
Acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. Has low phosphatase activity. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 0 |
| >sp|B0SW62|RUTD_CAUSK Putative aminoacrylate hydrolase RutD OS=Caulobacter sp. (strain K31) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 125/304 (41%), Gaps = 59/304 (19%)
Query: 27 IFYRTYGRGPTK----VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+++ +G GP VIL GL G+ W PQ++ L
Sbjct: 9 LYHEVHG-GPASDRQTVILSAGLGGSGTFWAPQMQALMSR-------------------- 47
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
V +D+RG GRS+ + +T M D++ LMD LG ++AHV GH+ G
Sbjct: 48 ---FRVVLYDHRGTGRSARTLTD-PHTVAAMGDDIVKLMDALGLERAHVVGHAAGGNAGL 103
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT---- 198
LA P+R+ L ++N G + P + R F + R A+ DT
Sbjct: 104 ALALNHPDRLDKLVVVN---GWSRPDPHIK--------RCF-----DTRLALLNDTGIAA 147
Query: 199 --HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256
H +L S A L E V I+ G S +I A + +D++T
Sbjct: 148 YVHAQPLFLYPADWLSANNARLEAEEVHHIN--GFPSPDVMRTRIQALLEFDI-DEDLET 204
Query: 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALI 315
IR V V D++ + +RRLAE+L P A + P GGH + E N A++
Sbjct: 205 IRCP---VLVSASADDMLVPLSCSRRLAERL-PNATLDIAPWGGHGFTVTAPEAFNAAVL 260
Query: 316 DLIK 319
+ +
Sbjct: 261 NFLS 264
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Caulobacter sp. (strain K31) (taxid: 366602) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|P34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 23/135 (17%)
Query: 25 IKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84
+++ + G GP V L G + +W Q+ LA A
Sbjct: 248 VRLHFVELGSGPA-VCLCHGFPESWYSWRYQIPALAQ----------------------A 284
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
G V A D +G G SS P + EY +++ K+++ +D LG QA GH G M+ +
Sbjct: 285 GYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYM 344
Query: 145 AAMVPERVLSLALLN 159
A PERV ++A LN
Sbjct: 345 ALFYPERVRAVASLN 359
|
Acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. Has low phosphatase activity. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 0 |
| >sp|B1ZB18|RUTD_METPB Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 113/288 (39%), Gaps = 48/288 (16%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G V+L GL G+ + PQ+ LA V +D+R
Sbjct: 14 GARTVLLSPGLGGSAHYFAPQVPALAER-----------------------FRVVTYDHR 50
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLS 154
G GRS P++ + MA+DV+AL+DHLG + GH++G +IA LA PERV
Sbjct: 51 GTGRSPGPLEPG-HDIAAMARDVLALLDHLGIGTTDIVGHALGGLIALHLALTHPERVER 109
Query: 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEY---VGS 211
+ ++N G+ + S PE Y +L E V
Sbjct: 110 IVVIN----GWAVMDPATRRCFSARKALLTQAGPEAFVRAQAIFLYPAPWLSENAARVAD 165
Query: 212 STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRH 271
+A+ + K + A + + FD + ++ + + ++ R
Sbjct: 166 DEAQALAHFPGAKTVLAR-IAALEAFDAT---AALARIPHETL-----------LMAARD 210
Query: 272 DVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLI 318
DV+ + LA L P AR+ P GGH S R + N+ L+D +
Sbjct: 211 DVLVPFTASDALAAGL-PNARLDLAPEGGHAHSVTRPDAFNRTLLDFL 257
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) (taxid: 441620) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|C7CM33|RUTD_METED Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
V +D+RG GRS P++ + MA+DV+ L+DHLG A + GH++G +IA +LA
Sbjct: 42 FRVVTYDHRGTGRSPGPLEPG-HDIAAMARDVLDLLDHLGIGTADIVGHALGGLIALQLA 100
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PERV + ++N G+ + + R PE Y +L
Sbjct: 101 LTHPERVGRIVVIN----GWAVMDPATRRCFAARKALLRHAGPEAFVRAQAIFLYPAPWL 156
Query: 206 EEY---VGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
E V + +A+ + + + A + + FDG + ++ + +
Sbjct: 157 SENAARVANDEAQALAHFPGEETVLAR-ISALEAFDGT---AALARIPHETL-------- 204
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLIKA 320
++ R DV+ + LA L P AR+ P GGH S R+ N+ L+D + +
Sbjct: 205 ---LMAARDDVLVPFTASDILAAGL-PNARLDLAPEGGHAHSVTRSASFNRTLLDFLAS 259
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Methylobacterium extorquens (strain DSM 5838 / DM4) (taxid: 661410) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|P27747|ACOC_CUPNH Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoC PE=1 SV=3 | Back alignment and function description |
|---|
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 62/142 (43%), Gaps = 25/142 (17%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+GI++ Y G G V+ I G G D W L LA
Sbjct: 122 DGIRVRYARKGGGAETVLFIHGFGGDLDNWLFNLDPLADA-------------------- 161
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
V A D G G+SS + T T MA V MD G + AHV GHSMG +A
Sbjct: 162 ---YTVVALDLPGHGQSSPRLAGT--TLAQMAGFVARFMDETGIEAAHVVGHSMGGGVAA 216
Query: 143 KLAAMVPERVLSLALLNVTGGG 164
+LA P+RVLS+AL++ G G
Sbjct: 217 QLAVDAPQRVLSVALVSPVGFG 238
|
Dihydrolipoamide acetyltransferase involved in acetoin catabolism. Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|A8IAD8|RUTD_AZOC5 Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 26/133 (19%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
++Y +G G T ++L G+ G W PQ++ LA +
Sbjct: 11 LYYEIHGAG-TPILLSAGMGGGAGFWRPQIEALAARHQ---------------------- 47
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
V +D+ G GRS + T MA+D+ ++D G + AHV GH++G +I +LA
Sbjct: 48 -VILYDHAGTGRSGRDIGPRSITE--MARDMARVLDAAGVEDAHVAGHAIGGIIGMELAL 104
Query: 147 MVPERVLSLALLN 159
PERV SL ++N
Sbjct: 105 AAPERVRSLTIVN 117
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) (taxid: 438753) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|P34914|HYES_MOUSE Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 23/136 (16%)
Query: 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
GI++ + G GP + L G + +W Q+ LA
Sbjct: 245 GIRLHFVEMGSGPA-LCLCHGFPESWFSWRYQIPALAQ---------------------- 281
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V A D +G G SS P + EY +++ K+++ +D LG QA GH ++
Sbjct: 282 AGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWN 341
Query: 144 LAAMVPERVLSLALLN 159
+A PERV ++A LN
Sbjct: 342 MALFYPERVRAVASLN 357
|
Acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. Has phosphatase activity. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 3 EC: . EC: 2 EC: . EC: 1 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 405 | ||||||
| 255561848 | 400 | carboxylesterase np, putative [Ricinus c | 0.975 | 0.987 | 0.713 | 1e-166 | |
| 449456391 | 402 | PREDICTED: putative aminoacrylate hydrol | 0.980 | 0.987 | 0.688 | 1e-160 | |
| 449497355 | 402 | PREDICTED: putative aminoacrylate hydrol | 0.980 | 0.987 | 0.686 | 1e-159 | |
| 225455348 | 403 | PREDICTED: putative aminoacrylate hydrol | 0.972 | 0.977 | 0.688 | 1e-159 | |
| 356571350 | 405 | PREDICTED: putative aminoacrylate hydrol | 0.995 | 0.995 | 0.687 | 1e-157 | |
| 224132738 | 407 | predicted protein [Populus trichocarpa] | 0.962 | 0.958 | 0.668 | 1e-157 | |
| 224120854 | 413 | predicted protein [Populus trichocarpa] | 0.982 | 0.963 | 0.667 | 1e-156 | |
| 357436445 | 411 | hypothetical protein MTR_1g007860 [Medic | 0.975 | 0.961 | 0.648 | 1e-154 | |
| 297796137 | 396 | hydrolase, alpha/beta fold family protei | 0.950 | 0.972 | 0.690 | 1e-152 | |
| 297789490 | 393 | hydrolase, alpha/beta fold family protei | 0.950 | 0.979 | 0.678 | 1e-151 |
| >gi|255561848|ref|XP_002521933.1| carboxylesterase np, putative [Ricinus communis] gi|223538858|gb|EEF40457.1| carboxylesterase np, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 289/405 (71%), Positives = 331/405 (81%), Gaps = 10/405 (2%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+C+V Q D A N NG++IFYRTYG GPTKV+LI GLAGTHD+WGPQ+KGL
Sbjct: 1 MPFCKV---STQQPNSDGACN-NGVEIFYRTYGYGPTKVLLIIGLAGTHDSWGPQIKGLT 56
Query: 61 GTDKPNDDDETILQDSVESGDGG--AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118
GTD+PNDDDE + D SGD GI+VCAFDNRGMGRSSVP KK++YTTKIMAKD I
Sbjct: 57 GTDRPNDDDELMTVDR-NSGDNDIDCGIQVCAFDNRGMGRSSVPTKKSQYTTKIMAKDAI 115
Query: 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178
AL+DHLGW +AHVFGHSMGAMIACKLAAMVP+RVLSLALLNVTGGGFQC PKLD QT+S+
Sbjct: 116 ALLDHLGWTKAHVFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFQCLPKLDRQTVSV 175
Query: 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
AIRF +AKTPE+RAAVDLDTHY++EYLEEYVG TRRAILYQEYVKGIS+TGMQSNYGFD
Sbjct: 176 AIRFLKAKTPEQRAAVDLDTHYTKEYLEEYVGCKTRRAILYQEYVKGISSTGMQSNYGFD 235
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG 298
GQI+ACW HKMT+ +I+ IRSAGFLVSVIHGR+D+IAQI YARRLAE+L PVARMIDL G
Sbjct: 236 GQINACWTHKMTRTEIEVIRSAGFLVSVIHGRNDIIAQIYYARRLAERLQPVARMIDLHG 295
Query: 299 GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRTSSGPRSYV 358
GHLVSHERTEEVNQAL DLI +E KI P DW NLPQ + G G+S +TSS + V
Sbjct: 296 GHLVSHERTEEVNQALHDLITTTETKIRPHDWNNLPQKTPGWFETGISLCKTSSEGGNNV 355
Query: 359 ---SGPLEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRVRASPT 400
G ++KLH+ L+Y+ LF+ FEYARR +SL+P RV AS T
Sbjct: 356 RSRCGIIDKLHVCLVYIFSLFIFVFEYARRAQRSLRPARVGASLT 400
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449456391|ref|XP_004145933.1| PREDICTED: putative aminoacrylate hydrolase RutD-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/405 (68%), Positives = 325/405 (80%), Gaps = 8/405 (1%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+ EV +AA D +N + IKIFYRTYGRG TKV+LI GLAGTHD+WGPQ+KGL
Sbjct: 1 MPFIEV--NTSSTAAEDVKIN-SAIKIFYRTYGRGSTKVLLIIGLAGTHDSWGPQIKGLT 57
Query: 61 GTDKPNDDDETILQDSVE--SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118
GTD PNDD + E + + G GIEVCAFDNRGMGRSSVP KK+EYTTKIMAKD I
Sbjct: 58 GTDVPNDDGDRNAAHVGEEPTFEDGGGIEVCAFDNRGMGRSSVPTKKSEYTTKIMAKDAI 117
Query: 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178
AL+DHLGW++AH+FGHSMG MIACKL AM PERV SLA+LNVTGGGFQCCPKLD QT I
Sbjct: 118 ALLDHLGWEKAHIFGHSMGGMIACKLGAMAPERVKSLAMLNVTGGGFQCCPKLDRQTFDI 177
Query: 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
A+RF +AKTPE+RA+VDLDTHYS+EYLEEYVG RR +LY+EYV+GISATGMQSN GF
Sbjct: 178 AVRFMKAKTPEQRASVDLDTHYSKEYLEEYVGFEKRRTLLYREYVEGISATGMQSNDGFA 237
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG 298
GQ++ACW H++T+KDI+ ++SAGFLVSVIHGRHDVIAQ+ YARRLAEKLYPVARM+DL G
Sbjct: 238 GQVNACWTHQVTRKDIECLQSAGFLVSVIHGRHDVIAQMYYARRLAEKLYPVARMVDLHG 297
Query: 299 GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVR-TSSGPRSY 357
GHLVS ERTEEVNQAL+DLIKASE K+SP DWTNLP+ SS + + M+FV + G S
Sbjct: 298 GHLVSRERTEEVNQALLDLIKASETKMSPHDWTNLPKKSSWWMEERMAFVTMKTEGGSSI 357
Query: 358 VSGP--LEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRVRASPT 400
S P LEKLHL+ LY GL LL F + R ++SLKP RV A+ T
Sbjct: 358 SSKPFLLEKLHLFFLYFFGLILLIFGHLRNTIKSLKPTRVGATLT 402
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449497355|ref|XP_004160379.1| PREDICTED: putative aminoacrylate hydrolase RutD-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/405 (68%), Positives = 325/405 (80%), Gaps = 8/405 (1%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+ EV +AA D +N + IKIFYRTYGRG TKV+LI GLAGTHD+WGPQ+KGL
Sbjct: 1 MPFIEV--NTSSTAAEDVKIN-SAIKIFYRTYGRGSTKVLLIIGLAGTHDSWGPQIKGLT 57
Query: 61 GTDKPNDDDETILQDSVE--SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118
GTD PNDD + E + + G GIEVCAFDNRGMGRSSVP KK+EYTTKIMAKD I
Sbjct: 58 GTDVPNDDGDRNAAHVGEEPTFEDGGGIEVCAFDNRGMGRSSVPTKKSEYTTKIMAKDAI 117
Query: 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178
AL+DHLGW++AH+FGHSMG MIACKL AM PERV SLA+LNVTGGGFQCCPKLD QT I
Sbjct: 118 ALLDHLGWEKAHIFGHSMGGMIACKLGAMAPERVKSLAMLNVTGGGFQCCPKLDRQTFDI 177
Query: 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
A+RF +AKTPE+RA+VDLDTHYS+EYLEEYVG RR +LY+EYV+GISATGMQSN GF
Sbjct: 178 AVRFMKAKTPEQRASVDLDTHYSKEYLEEYVGFEKRRTLLYREYVEGISATGMQSNDGFA 237
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG 298
GQ++ACW H++T+KDI+ ++SAGFLVSVIHGRHDVIAQ+ YARRLAEKLYPVARM+DL G
Sbjct: 238 GQVNACWTHQVTRKDIECLQSAGFLVSVIHGRHDVIAQMYYARRLAEKLYPVARMVDLHG 297
Query: 299 GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVR-TSSGPRSY 357
GHLVS ERTEEVNQAL+DLI+ASE K+SP DWTNLP+ SS + + M+FV + G S
Sbjct: 298 GHLVSRERTEEVNQALLDLIRASETKMSPHDWTNLPKKSSWWMEERMAFVTMKTEGGSSI 357
Query: 358 VSGP--LEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRVRASPT 400
S P LEKLHL+ LY GL LL F + R ++SLKP RV A+ T
Sbjct: 358 SSKPFLLEKLHLFFLYFFGLILLIFGHLRNTIKSLKPTRVGATLT 402
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455348|ref|XP_002276809.1| PREDICTED: putative aminoacrylate hydrolase RutD [Vitis vinifera] gi|302143917|emb|CBI23022.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/405 (68%), Positives = 332/405 (81%), Gaps = 11/405 (2%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+C V G Q+A +NGI I+YRTYG GP KV+LI GLAGTHD+WGPQ++GL
Sbjct: 1 MPFCRV--GHYQNAGDTGG--NNGIGIYYRTYGHGPIKVLLIIGLAGTHDSWGPQIRGLT 56
Query: 61 GTDKPNDDDETIL--QDSVESGDGG--AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116
GT+ PNDDD++ + E GDGG GIEVCAFDNRGMG+S VP KK+EYTTKIMAKD
Sbjct: 57 GTETPNDDDDSGADGRGPGEDGDGGCNGGIEVCAFDNRGMGQSFVPTKKSEYTTKIMAKD 116
Query: 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176
IALMDHLGW++AH+FGHSMGAMIACKLAA VP+RVLSLALLNVTGGGF+C PKLD +TL
Sbjct: 117 AIALMDHLGWRKAHIFGHSMGAMIACKLAATVPDRVLSLALLNVTGGGFECFPKLDRKTL 176
Query: 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236
SIAIRF +AKTPE+RAAVDLDTHY++EYLEE++G +TRR ILYQEYVKGIS+TGMQSN+G
Sbjct: 177 SIAIRFLKAKTPEQRAAVDLDTHYTEEYLEEFIGPNTRRDILYQEYVKGISSTGMQSNHG 236
Query: 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL 296
F+GQI+ACW HKMT+ +++ IR+AGFL+SVIHGR+D+IAQIC+ARRLAEKL P A+MI+L
Sbjct: 237 FEGQINACWTHKMTKAELELIRTAGFLISVIHGRYDIIAQICHARRLAEKLQPCAKMIEL 296
Query: 297 PGGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRTSSGPRS 356
GGHLVSHERTEEVNQAL++LI ASE KISP DWTNL + +SG L MS RT + S
Sbjct: 297 HGGHLVSHERTEEVNQALLELINASETKISPHDWTNLTKETSGCLVTWMSRRRTDADGGS 356
Query: 357 ---YVSGPLEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRVRAS 398
++ LEKLHL +LYL GLF+LA EY RR L+ +KPV V AS
Sbjct: 357 SPCFLFSILEKLHLCILYLFGLFMLAQEYGRRALRRIKPVGVGAS 401
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571350|ref|XP_003553841.1| PREDICTED: putative aminoacrylate hydrolase RutD-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 280/407 (68%), Positives = 323/407 (79%), Gaps = 4/407 (0%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+C VG + S DA LN N IKIFYRTYG GPTKV+LI GLA TH+AWGPQ+KGL
Sbjct: 1 MPFC-YVGTQPSSPVADAPLN-NDIKIFYRTYGGGPTKVLLIIGLAATHEAWGPQIKGLT 58
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
GT NDDD+ ++ + GI VCAFDNRG+GRSSV V K+EY+TKIMAKD IAL
Sbjct: 59 GTTVSNDDDDDDVRVVWSGEEVNGGIHVCAFDNRGVGRSSVAVSKSEYSTKIMAKDAIAL 118
Query: 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180
+DHLGWK+AHVFGHSMGAMIACK+AAMVP+RVLSLALLNVTGGGFQC PKLD +T+S+A
Sbjct: 119 LDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKLDQKTISVAY 178
Query: 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
RF +AKTPE+RAAVDLDTHYSQEYLEEYVG+ RRAILYQ+YVKGIS TGMQSNYGFDGQ
Sbjct: 179 RFLKAKTPEQRAAVDLDTHYSQEYLEEYVGTDKRRAILYQQYVKGISTTGMQSNYGFDGQ 238
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH 300
++ACW HKMT+ +I+ I+SAGFLVSVIHGRHD+IAQI YA+RLAE+L+PVARM+DL GGH
Sbjct: 239 LNACWTHKMTETEIEVIKSAGFLVSVIHGRHDIIAQIYYAKRLAERLHPVARMVDLHGGH 298
Query: 301 LVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRTSSGPR--SYV 358
LVSHER EEVNQAL DLIKASE +SP DWTNLP+ S K + + R S
Sbjct: 299 LVSHERPEEVNQALFDLIKASEVNMSPHDWTNLPKKESWWNEKRVLIITNIQAGRNVSLN 358
Query: 359 SGPLEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRVRASPTSASMQ 405
LEKLHL LLY GL +LAFEY R+LL+SLKP +V SP+ Q
Sbjct: 359 GCMLEKLHLCLLYFFGLLVLAFEYGRKLLRSLKPTQVGVSPSYIESQ 405
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132738|ref|XP_002321397.1| predicted protein [Populus trichocarpa] gi|222868393|gb|EEF05524.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/407 (66%), Positives = 327/407 (80%), Gaps = 17/407 (4%)
Query: 1 MPYCEVVGGKEQ------SAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGP 54
MP+CEV + +A+P + N+NGIKIFYRT+G G TKV+LI G AGT+D+WGP
Sbjct: 1 MPFCEVAKHQASLYDGVDAASPSRSNNNNGIKIFYRTHGHGTTKVLLIIGFAGTNDSWGP 60
Query: 55 QLKGLAGTDKPNDDD--ETILQ--DSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110
Q+K L G ++ NDDD + Q D+ E G GG+G++VCAFDNRGMGRSSVP K +EY+T
Sbjct: 61 QIKALTGKERSNDDDGMRGVDQSDDNGEDGYGGSGVQVCAFDNRGMGRSSVPTKNSEYST 120
Query: 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170
KIMAKD IALMDHLGW++AHVFGHSMGAMIACKLAAMVP+RVLSLALLNVTGGGF+C PK
Sbjct: 121 KIMAKDAIALMDHLGWRKAHVFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFECLPK 180
Query: 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATG 230
LD QT+S+AIRF +AKTPE+RAAVDLDTHY++EYL+EYVGSSTRRAILYQEYVKGIS+TG
Sbjct: 181 LDRQTISVAIRFLKAKTPEQRAAVDLDTHYTKEYLDEYVGSSTRRAILYQEYVKGISSTG 240
Query: 231 MQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV 290
MQS+YGFDGQ++ACW HKMT+ + + IRSAGFLVSVIHGRHD+IA I YARRLAEKL PV
Sbjct: 241 MQSSYGFDGQVNACWTHKMTRTETELIRSAGFLVSVIHGRHDIIAPIYYARRLAEKLQPV 300
Query: 291 ARMIDLPGGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRT 350
ARM+DL GGHLVSHERT+EVNQ L +LI A+E K+SP DW+N P+ SS +G T
Sbjct: 301 ARMVDLHGGHLVSHERTKEVNQVLHELINATETKMSPHDWSNFPRKSSRWSGRG-----T 355
Query: 351 SSGPRSYVSG--PLEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRV 395
G + S +EKLHL + + GLF+L FEY RR ++SL+P RV
Sbjct: 356 LLGKNNICSTFCAVEKLHLSISSVFGLFMLMFEYIRRAIRSLQPARV 402
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120854|ref|XP_002318435.1| predicted protein [Populus trichocarpa] gi|222859108|gb|EEE96655.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 277/415 (66%), Positives = 331/415 (79%), Gaps = 17/415 (4%)
Query: 1 MPYCEVVGGKEQSAAPD------AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGP 54
MP+CEV K+Q++ D ++ N+ GIKIFY+TYG GPTKV+LI GLAGTHD+WGP
Sbjct: 1 MPFCEV--AKQQTSLDDTVDAASSSNNNKGIKIFYKTYGHGPTKVLLIIGLAGTHDSWGP 58
Query: 55 QLKGLAGTDKPNDDD-----ETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109
Q+KGL GT++ NDDD + DS G GG GI+VCAFDNRGMGRSSVP KK+EYT
Sbjct: 59 QIKGLTGTERSNDDDRMRAIDPNSSDSGGCGYGGNGIQVCAFDNRGMGRSSVPTKKSEYT 118
Query: 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169
TKIMAKD IALMDHLGW++AH+FGHSMGAMIACKLAAMVP+RVLSLALLNVTGGGF+C P
Sbjct: 119 TKIMAKDAIALMDHLGWRKAHIFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFECLP 178
Query: 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT 229
KLD +T+S+AIRF +AKTPE+RAAVDLDTHY++EYL+E+VGSSTRRAILYQEYVKGIS+T
Sbjct: 179 KLDSRTISVAIRFLKAKTPEQRAAVDLDTHYTKEYLDEHVGSSTRRAILYQEYVKGISST 238
Query: 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP 289
GMQS+YGFDGQ++ACW HKMT+ +I+ IRSAGFLVSVIHGRHD+IAQI YARRLA+KL P
Sbjct: 239 GMQSSYGFDGQVNACWTHKMTRTEIELIRSAGFLVSVIHGRHDIIAQIYYARRLAKKLQP 298
Query: 290 VARMIDLPGGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSF-- 347
AR++DL GGHLVSHERTEEVNQAL DLI AS+KK++P WTN P+ SS KG
Sbjct: 299 FARLVDLHGGHLVSHERTEEVNQALCDLISASDKKMNPHVWTNFPKESSRWSEKGSLLGK 358
Query: 348 --VRTSSGPRSYVSGPLEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRVRASPT 400
V + +EKLHL + Y+ GLF+ FEY +R ++S P RV +S T
Sbjct: 359 ICVEGKTDDICSTVCVIEKLHLSISYVFGLFVFMFEYIQRAIRSRHPARVGSSLT 413
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357436445|ref|XP_003588498.1| hypothetical protein MTR_1g007860 [Medicago truncatula] gi|355477546|gb|AES58749.1| hypothetical protein MTR_1g007860 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/407 (64%), Positives = 320/407 (78%), Gaps = 12/407 (2%)
Query: 1 MPYCEV-------VGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWG 53
MPYC+V A DA LN N +KIFYRTYGRGPTKV+LI GLA TH+ WG
Sbjct: 1 MPYCDVGTQTSSPATSSSAVAPADAHLN-NDVKIFYRTYGRGPTKVLLIIGLASTHEGWG 59
Query: 54 PQLKGLAGTDKPNDDDETILQDSVE-SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112
PQ+KG GT+ PND+D+ + S E + G GI+VCAFDNRG+GRSSVP++K++Y+TKI
Sbjct: 60 PQIKGFTGTNVPNDEDDAVW--SCEGDNEAGGGIQVCAFDNRGVGRSSVPIRKSDYSTKI 117
Query: 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172
MAKD I L+DHLGWK+AHVFGHSMG+MIACKLAAMVP+RVLS+ALLN TGGGFQC PK D
Sbjct: 118 MAKDAITLLDHLGWKKAHVFGHSMGSMIACKLAAMVPDRVLSMALLNATGGGFQCFPKFD 177
Query: 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ 232
+T+S+A RF +AK+PE+RA VDLDTHYSQEYLEEYVG+ RR ILYQ+YVKGIS++GMQ
Sbjct: 178 RRTISVAYRFLKAKSPEQRAEVDLDTHYSQEYLEEYVGTVKRRTILYQQYVKGISSSGMQ 237
Query: 233 SNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR 292
SNYGFDGQ+ ACW HKMTQK+I+ I+SAGFLVSVIHGR D+IAQ+ YARRLAE+ +P+AR
Sbjct: 238 SNYGFDGQLSACWNHKMTQKEIEAIKSAGFLVSVIHGRADIIAQLYYARRLAERFHPMAR 297
Query: 293 MIDLPGGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRTS- 351
+++L GGHLVSHER EEVNQAL DLIKASE K+ P DWTNLP T S + M V+ +
Sbjct: 298 LVELHGGHLVSHERPEEVNQALFDLIKASEVKMIPHDWTNLPNTQSWWKERRMLLVKNNQ 357
Query: 352 SGPRSYVSGPLEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRVRAS 398
SG +EKLH +LY L +L FE+ R+L++SLKPVRV +S
Sbjct: 358 SGNNISTEYIIEKLHFCILYFLSLLILVFEFGRKLVRSLKPVRVGSS 404
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796137|ref|XP_002865953.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] gi|297311788|gb|EFH42212.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 277/401 (69%), Positives = 330/401 (82%), Gaps = 16/401 (3%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+CEVV ++ P+ LN+ IKIFYRTYG GP K +LI GLAGTH++WGPQ+ GL
Sbjct: 1 MPFCEVV---KEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLT 57
Query: 61 GTDKPNDDDET---ILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117
GTDKPNDDDE I+ D G+GIEVCAFDNRGMGRSSVP K+EYTT IMA D
Sbjct: 58 GTDKPNDDDEDDGGIVSD-------GSGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDS 110
Query: 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177
I+L+DHLGWK+AH+ GHSMGAMIACKLAAMVPERVLSLALLNVTGGGF+C PKLD Q+LS
Sbjct: 111 ISLLDHLGWKRAHIIGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFECFPKLDRQSLS 170
Query: 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237
IAIRF +AKTPE+RAAVDLDTHYS++YLEE VG++TRRAILYQ+YVKGIS TGMQS YGF
Sbjct: 171 IAIRFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGF 230
Query: 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP 297
DGQI+ACW+HK+T+ +I+ IRSAGFLVSVIHGRHDVIAQICYARRLA++LYPVARM+DL
Sbjct: 231 DGQINACWLHKITKPEIEVIRSAGFLVSVIHGRHDVIAQICYARRLAQRLYPVARMVDLH 290
Query: 298 GGHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRTSSGPRSY 357
GGHLVSHERTEEVN+AL++LIKASE K P DWTNL + G L + ++ + +SS ++
Sbjct: 291 GGHLVSHERTEEVNKALLELIKASEMKKRPTDWTNLTMETPGYLKRRLALITSSSEGKNA 350
Query: 358 VSGP---LEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRV 395
VS EK H +LL+L GL +LAFEY+RR +++KPV+V
Sbjct: 351 VSPAHFIAEKFHRFLLFLFGLLVLAFEYSRRAFRAVKPVKV 391
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297789490|ref|XP_002862707.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] gi|297308385|gb|EFH38965.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 270/398 (67%), Positives = 323/398 (81%), Gaps = 13/398 (3%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+CEVV ++ P+ LN+ IK+FYRTYG GP K +LI GLAGTH++WGPQ+ GL
Sbjct: 1 MPFCEVV---KEDVGPETTLNNAAIKLFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLT 57
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
GTDKPND D I+ D +GIEVCAFDNRGMGRSS+P K+EY+T IMA D I L
Sbjct: 58 GTDKPNDVDGGIVSDD-------SGIEVCAFDNRGMGRSSIPTHKSEYSTTIMANDSINL 110
Query: 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180
+DHLGWK+AH+ GHSMGAMIACKLAAMVPERVLSLALLNVTGGGF+C PKLD Q+LSIAI
Sbjct: 111 LDHLGWKRAHIIGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFECFPKLDRQSLSIAI 170
Query: 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
RF +AKTPE+RAAVDLDTHYS++YLEE VG++TRRAILYQ+YVKGIS TGMQS YGFDGQ
Sbjct: 171 RFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQ 230
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH 300
I+ CW+HK+T+ +I IRSAGFLVSVIHGRHDVIAQICYARRLA++LYPVARM+DL GGH
Sbjct: 231 INTCWLHKITKPEIVVIRSAGFLVSVIHGRHDVIAQICYARRLAQRLYPVARMVDLHGGH 290
Query: 301 LVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRTSSGPRSYVSG 360
LVSHERTEEVN+AL++LIKASE K P DWTNL + G K ++ +R+S ++ VS
Sbjct: 291 LVSHERTEEVNKALLELIKASEMKKIPTDWTNLTMETPGYFKKRLALIRSSPEGKNAVSP 350
Query: 361 P---LEKLHLYLLYLCGLFLLAFEYARRLLQSLKPVRV 395
EK H +LL+L GL +LAFEY+RR +++KPV+V
Sbjct: 351 AHFIAEKFHRFLLFLFGLLVLAFEYSRRAFRAVKPVKV 388
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 405 | ||||||
| TAIR|locus:2168357 | 396 | AT5G53050 [Arabidopsis thalian | 0.965 | 0.987 | 0.656 | 1.2e-138 | |
| DICTYBASE|DDB_G0281917 | 317 | DDB_G0281917 "alpha/beta hydro | 0.545 | 0.697 | 0.314 | 1.7e-22 | |
| DICTYBASE|DDB_G0290427 | 320 | DDB_G0290427 "alpha/beta hydro | 0.545 | 0.690 | 0.331 | 2.9e-22 | |
| DICTYBASE|DDB_G0277679 | 366 | DDB_G0277679 "alpha/beta hydro | 0.548 | 0.606 | 0.285 | 8.5e-22 | |
| UNIPROTKB|Q747V8 | 266 | GSU3157 "Hydrolase or acyltran | 0.167 | 0.255 | 0.428 | 5.4e-11 | |
| TIGR_CMR|GSU_3157 | 266 | GSU_3157 "hydrolase, alpha/bet | 0.167 | 0.255 | 0.428 | 5.4e-11 | |
| UNIPROTKB|O06420 | 262 | bpoC "Putative non-heme bromop | 0.540 | 0.835 | 0.299 | 1.4e-09 | |
| UNIPROTKB|G4N3M2 | 357 | MGG_05826 "Epoxide hydrolase 2 | 0.195 | 0.221 | 0.379 | 2.1e-09 | |
| UNIPROTKB|Q0BZI5 | 320 | HNE_2413 "Putative epoxide hyd | 0.190 | 0.240 | 0.402 | 1.1e-08 | |
| UNIPROTKB|Q3ABD5 | 258 | CHY_1729 "Hydrolase, alpha/bet | 0.158 | 0.248 | 0.469 | 2.5e-08 |
| TAIR|locus:2168357 AT5G53050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1357 (482.7 bits), Expect = 1.2e-138, P = 1.2e-138
Identities = 266/405 (65%), Positives = 320/405 (79%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+CEVV ++ P+ LN+ IKIFYRTYG GP K +LI GLAGTH++WGPQ+ GL
Sbjct: 1 MPFCEVV---KEDVGPETTLNNAAIKIFYRTYGHGPIKALLIIGLAGTHESWGPQIMGLT 57
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
GTDKPNDDD+ + S D +GIEVCAFDNRGMGRSSVP K+EYTT IMA D I+L
Sbjct: 58 GTDKPNDDDDD--DGGIVSDD--SGIEVCAFDNRGMGRSSVPTHKSEYTTTIMANDSISL 113
Query: 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180
+DHLGWK+AH+ GHSMGAMIACKLAAM PERVLSLALLNVTGGGF+C PKLD ++LSIAI
Sbjct: 114 LDHLGWKKAHIIGHSMGAMIACKLAAMAPERVLSLALLNVTGGGFECFPKLDRKSLSIAI 173
Query: 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
RF +AKTPE+RAAVDLDTHYS++YLEE VG++TRRAILYQ+YVKGIS TGMQS YGFDGQ
Sbjct: 174 RFLKAKTPEQRAAVDLDTHYSKDYLEESVGTNTRRAILYQQYVKGISETGMQSKYGFDGQ 233
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH 300
I+ACW+HK+T+ +I+ IRSAGFLVSVIHGRHDVIAQICYARRLA++LYPVARM+DL GGH
Sbjct: 234 INACWLHKITKVEIELIRSAGFLVSVIHGRHDVIAQICYARRLAQRLYPVARMVDLHGGH 293
Query: 301 LVSHERTEEVNQALIDLIKASE-KKISPQDWTNLPQTSSGVLAKGMSFVRTSSGPRSYVS 359
LVSHERTEEVN+AL++LIKASE KKIS DWTNL + G + ++ +R+S+ ++ V+
Sbjct: 294 LVSHERTEEVNKALLELIKASEMKKIST-DWTNLTMETPGYFKRRLTLIRSSTEGKN-VA 351
Query: 360 GPXXXXXXXXXXXXXXXXX----AFEYARRLLQSLKPVRVRASPT 400
P AFEY+RR +++ PV+V S T
Sbjct: 352 SPAHFIAEKFHGFLLFLFGLLVLAFEYSRRAFRAVNPVKVGPSLT 396
|
|
| DICTYBASE|DDB_G0281917 DDB_G0281917 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 261 (96.9 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 73/232 (31%), Positives = 116/232 (50%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
++ FDNRG G S P K ++T MA D+I LMDHLGW AHV G SMG MIA +LA
Sbjct: 73 QIVIFDNRGSGNSGTPNK---FSTFDMALDMIELMDHLGWDSAHVIGASMGGMIALELAT 129
Query: 147 MVP-ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
++P +R+ SL L VT G P + ++ +I F P K++ + +D+ YS+EYL
Sbjct: 130 VIPPQRIRSLTLA-VTHAGHTITPIKGTKAVTKSI-F--TSDPIKKSQITIDSLYSKEYL 185
Query: 206 EEYV---GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ S + + +L +V + + S G + H +++ ++ I + F
Sbjct: 186 SKLSIEDPSRSNKDVLTDIFVDRLKTSKKPSLNAIMGHFKSVLTHYISETKLKYISNQEF 245
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQAL 314
+ +I G +D + + L KL P + GH V+ ER + N +
Sbjct: 246 PIQIITGTNDHLVDPKNSFYLKSKLNPCEFTVFQGCGHAVNTERLNDFNNLI 297
|
|
| DICTYBASE|DDB_G0290427 DDB_G0290427 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 259 (96.2 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 77/232 (33%), Positives = 117/232 (50%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
E FDNRG+GRS P T Y++ MA D++ LMDHL W++AHV G SMG MI+ +LA
Sbjct: 76 EYLIFDNRGVGRSGNPT--TSYSSSSMATDLLELMDHLQWEKAHVVGVSMGGMISLELAH 133
Query: 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL- 205
+ P+R+ SLAL+ VT G P + ++ I F R KR V YS+ YL
Sbjct: 134 LAPQRMKSLALV-VTHAG-SLAPARGVWGITQTI-FIRDH--RKRGRVLAAILYSKPYLI 188
Query: 206 -EEYVG-SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA-GF 262
+ V + T + ++Y K + T + G I HK+++K + I+ G
Sbjct: 189 KQSLVDPTKTNLEMFVEKYCKDMETTKPPAISALYGHIRTVNTHKVSKKRLLEIKEKIGG 248
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQAL 314
+++I G HD + + L L P ++ GH V+ E +E + A+
Sbjct: 249 PITIITGTHDDLVSPSGSHYLNSILSPTEFVVFQGSGHSVNIENYQEFHDAI 300
|
|
| DICTYBASE|DDB_G0277679 DDB_G0277679 "alpha/beta hydrolase fold-1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 230 (86.0 bits), Expect = 8.5e-22, Sum P(2) = 8.5e-22
Identities = 66/231 (28%), Positives = 111/231 (48%)
Query: 87 EVCAFDNRGMGRSSVPVKKT-EYTTKIMAKDVIALM-DHLGWKQAHVFGHSMGAMIACKL 144
E+C FDNRG+G+S++ K + ++TK MA D I L+ D L W + H+ G SMG M + L
Sbjct: 74 EICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHL 133
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
++++PE+V SL + V G F P + + FF +K+A + YS Y
Sbjct: 134 SSIIPEKVQSLVIACVPNGYF--LPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNY 191
Query: 205 LEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
L+E S TR ++++ G G QI ++ ++K ++ I+
Sbjct: 192 LDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYI-TNRFSKKSLEVIKKYSI 250
Query: 263 LVSVIHGRHDVIAQICYARR-LAEKLYPVARMIDLPGGHLVSHERTEEVNQ 312
VI+ + D + I ++ + L P+ + + GGHL E N+
Sbjct: 251 PTIVINSKKDSLVTIDITKKQIVNPLKPLNFHV-IEGGHLSQLENPTFFNK 300
|
|
| UNIPROTKB|Q747V8 GSU3157 "Hydrolase or acyltransferase, alpha/beta fold family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 127 (49.8 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
GAG + D RG G S P Y+ +I A D++ALMDHL QA + G SMG +
Sbjct: 43 GAGFRLVTPDLRGFGESDAP--DGPYSMEIFADDIVALMDHLSIGQAVIGGMSMGGYVLM 100
Query: 143 KLAAMVPERV 152
L PERV
Sbjct: 101 NLLERYPERV 110
|
|
| TIGR_CMR|GSU_3157 GSU_3157 "hydrolase, alpha/beta fold family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 127 (49.8 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
GAG + D RG G S P Y+ +I A D++ALMDHL QA + G SMG +
Sbjct: 43 GAGFRLVTPDLRGFGESDAP--DGPYSMEIFADDIVALMDHLSIGQAVIGGMSMGGYVLM 100
Query: 143 KLAAMVPERV 152
L PERV
Sbjct: 101 NLLERYPERV 110
|
|
| UNIPROTKB|O06420 bpoC "Putative non-heme bromoperoxidase BpoC" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 161 (61.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 73/244 (29%), Positives = 106/244 (43%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG FDNRG+G + +TT+ M D AL++ L A V G SMGA IA +
Sbjct: 39 AGYRCITFDNRGIGATE---NAEGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQE 95
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF-RAKTPEKRAAVDLDTHYSQ 202
L + PE V S A+L T G +LD A +FF +A+ + V L Y
Sbjct: 96 LMVVAPELVSS-AVLMATRG------RLDR-----ARQFFNKAEAELYDSGVQLPPTYDA 143
Query: 203 E--YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
LE + + + +++ S ++S G Q+ T + + R+
Sbjct: 144 RARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA---PQTNR-LPAYRNI 199
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLIK 319
V VI DV+ R +A+ L P R + +P GHL ER E VN A++
Sbjct: 200 AAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFF- 257
Query: 320 ASEK 323
AS K
Sbjct: 258 ASVK 261
|
|
| UNIPROTKB|G4N3M2 MGG_05826 "Epoxide hydrolase 2" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
GG G A D RG GRSSVP Y + D++AL+ HL +A GH GA +
Sbjct: 53 GGLGFHAVAPDTRGYGRSSVPAGPEAYALEHHVSDMVALLAHLRRDKAVWIGHDWGAGLV 112
Query: 142 CKLAAMVPERVLSLALLNV 160
AAM P++ + + L V
Sbjct: 113 WAFAAMQPDKCVGVCCLTV 131
|
|
| UNIPROTKB|Q0BZI5 HNE_2413 "Putative epoxide hydrolase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V A D RG G+S P + T+Y + KDVI L+ LG+ A V GH GA A
Sbjct: 52 AGYHVVAPDMRGYGKSDKPPEITDYVQTEVIKDVIGLIPALGYDNAVVIGHDWGAPTAWS 111
Query: 144 LAAMVPERVLSLALLNV 160
A P++V ++ L+V
Sbjct: 112 TALFHPDKVRAVGGLSV 128
|
|
| UNIPROTKB|Q3ABD5 CHY_1729 "Hydrolase, alpha/beta fold family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 124 (48.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER 151
DNRG GRS P + +T + A D+ L+D L ++AH+FG SMG MIA A PER
Sbjct: 53 DNRGAGRSDCP--EEPWTIETNADDLKELLDVLKIEKAHIFGISMGGMIAQIFAIKYPER 110
Query: 152 VLSLAL 157
V L L
Sbjct: 111 VEKLVL 116
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 405 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 5e-33 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 4e-22 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 2e-18 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 5e-16 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 8e-16 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 1e-14 | |
| PRK10673 | 255 | PRK10673, PRK10673, acyl-CoA esterase; Provisional | 1e-07 | |
| COG2021 | 368 | COG2021, MET2, Homoserine acetyltransferase [Amino | 8e-07 | |
| TIGR02240 | 276 | TIGR02240, PHA_depoly_arom, poly(3-hydroxyalkanoat | 3e-06 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 4e-06 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 5e-06 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 1e-05 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 2e-05 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 3e-05 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 5e-05 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 7e-05 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 2e-04 | |
| pfam03096 | 284 | pfam03096, Ndr, Ndr family | 3e-04 | |
| TIGR01249 | 306 | TIGR01249, pro_imino_pep_1, proline iminopeptidase | 3e-04 | |
| TIGR01392 | 351 | TIGR01392, homoserO_Ac_trn, homoserine O-acetyltra | 8e-04 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 0.001 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 125 bits (313), Expect = 5e-33
Identities = 70/309 (22%), Positives = 106/309 (34%), Gaps = 30/309 (9%)
Query: 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQD 75
L +G+++ YR G G ++L+ G G+ W P K L
Sbjct: 1 ASLLLAADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLP--------------- 45
Query: 76 SVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHS 135
A V A D RG GRS Y+ A D+ AL+D LG ++ + GHS
Sbjct: 46 -----ALAARYRVIAPDLRGHGRSDPA----GYSLSAYADDLAALLDALGLEKVVLVGHS 96
Query: 136 MGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV- 194
MG +A LA P+RV L L+ L + + AA
Sbjct: 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAF 156
Query: 195 -DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
L + L + +A ++ + + +
Sbjct: 157 AALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAA 216
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
+ I +IHG D + ARRLA L AR++ +PG GH E E
Sbjct: 217 LARITVP---TLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAA 273
Query: 313 ALIDLIKAS 321
AL+ ++
Sbjct: 274 ALLAFLERL 282
|
Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 4e-22
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 19/237 (8%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
+V AFD RG GRSS P +Y +A+D+ AL+D LG + ++ GHSMG +IA AA
Sbjct: 2 DVIAFDLRGFGRSSPPKDFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALAYAA 61
Query: 147 MVPERVLSLALLN-VTGGGFQ--CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQE 203
P+RV +L L+ V G P+ +L L + F + + A+ +
Sbjct: 62 KYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDN--FFNRLYDSVEALLGRAIKQFQ 119
Query: 204 YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD--GQIHAC-WMHKMTQKDIQTIRSA 260
L S + ++ T G + D+ T+
Sbjct: 120 ALGRPFVSDFLKQFELSSLIRF-GETLALDGLLGYALGYDLVWDRSAALKDIDVPTL--- 175
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+I G D + + +LA P A+++ + GHL E+ +EV + ++
Sbjct: 176 -----IIWGDDDPLVPPDASEKLAALF-PNAQLVVIDDAGHLAQLEKPDEVAELILK 226
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 2e-18
Identities = 45/164 (27%), Positives = 65/164 (39%), Gaps = 26/164 (15%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+L+ G G+ ++W P + LA AG V A D G G
Sbjct: 1 VVLLHGAGGSAESWRPLAEALA-----------------------AGYRVLAPDLPGHGD 37
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158
S P +T Y+ + A D+ AL+D LG + GHS+G +A AA PERV L L+
Sbjct: 38 SDGP-PRTPYSLEDDAADLAALLDALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLI 96
Query: 159 NVTGGGFQCCPKLDLQTLSIAIR--FFRAKTPEKRAAVDLDTHY 200
+ + D L +R A E A + +
Sbjct: 97 SPPLRDLEELLAADAAALLALLRAALLDADLREALARLTVPVLV 140
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 5e-16
Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 24 GIKIFYRTYGRG-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G + Y G G T V+LI G G + W LA
Sbjct: 118 GRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALA---------------------- 155
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V A D G G SS V + +A V+A +D LG ++AH+ GHSMG +A
Sbjct: 156 -AGRPVIALDLPGHGASSKAVGAG--SLDELAAAVLAFLDALGIERAHLVGHSMGGAVAL 212
Query: 143 KLAAMVPERVLSLALL 158
+LAA P+RV SL L+
Sbjct: 213 RLAARAPQRVASLTLI 228
|
Length = 371 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 8e-16
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 27/136 (19%)
Query: 26 KIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
++ YR G ++ I L W P L L
Sbjct: 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPAL-----------------------T 37
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
V +D RG G S P + Y+ + +A DV+AL+DHLG ++A G S+G +IA
Sbjct: 38 PDFRVLRYDKRGHGLSDAP--EGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQG 95
Query: 144 LAAMVPERVLSLALLN 159
LAA P+RV +L L N
Sbjct: 96 LAARRPDRVRALVLSN 111
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 1e-14
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 25/133 (18%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
+ P V+L +GL G+ W PQL L Q
Sbjct: 4 LHGPPDADAPV-VVLSSGLGGSGSYWAPQLAVLT-------------QR----------F 39
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
V +D+RG GRS + +Y+ MA DV+ L+D LG ++ H GH++G +I +LA
Sbjct: 40 HVVTYDHRGTGRSPGELP-PDYSIAHMADDVLQLLDALGIERFHFVGHALGGLIGLQLAL 98
Query: 147 MVPERVLSLALLN 159
PER+ SL L+N
Sbjct: 99 DYPERLTSLVLIN 111
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|182637 PRK10673, PRK10673, acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95
+ ++L+ GL G+ D G + D ND D I+Q D R
Sbjct: 16 NSPIVLVHGLFGSLDNLG-----VLARDLVNDHD--IIQ----------------VDMRN 52
Query: 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155
G S + MA+D++ +D L ++A GHSMG L A+ P+R+ L
Sbjct: 53 HGLSP---RDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKL 109
Query: 156 ALLNV 160
+++
Sbjct: 110 VAIDI 114
|
Length = 255 |
| >gnl|CDD|224932 COG2021, MET2, Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 8e-07
Identities = 42/151 (27%), Positives = 55/151 (36%), Gaps = 23/151 (15%)
Query: 27 IFYRTYG---RGPTKVILI-TGLAGTHDAWGPQ-------LKGLAGTDKPNDDDET--IL 73
+ Y TYG +LI L G A G L G KP D + I
Sbjct: 38 VAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVIC 97
Query: 74 QDSVESGDGGAGIEVCAFDNRG--MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AH 130
+ + G G + N G S PV T + M + L+D LG K+ A
Sbjct: 98 TNVLGGCKGSTG---PSSINPGGKPYGSDFPV----ITIRDMVRAQRLLLDALGIKKLAA 150
Query: 131 VFGHSMGAMIACKLAAMVPERVLSLALLNVT 161
V G SMG M A + A P+RV +
Sbjct: 151 VVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181
|
Length = 368 |
| >gnl|CDD|131294 TIGR02240, PHA_depoly_arom, poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 3e-06
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 33/245 (13%)
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
+EV AFD G+G SS P + Y +AK ++D+L + Q + G S G +A + A
Sbjct: 52 LEVIAFDVPGVGGSSTP--RHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFA 109
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PER L L G K + + + R + + A D+
Sbjct: 110 HDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDI--------- 160
Query: 206 EEYVGSSTRRAILYQEYVKGISATGMQSNYG--FDG----QIHACWMHKMTQKDIQTIRS 259
Y G+ R L + + + G Y F G IH W+HK+ Q +
Sbjct: 161 --YGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIH--WLHKIQQPTL----- 211
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319
V+ G D I + R LA ++ P A + + GHL R E V ++ +
Sbjct: 212 ------VLAGDDDPIIPLINMRLLAWRI-PNAELHIIDDGHLFLITRAEAVAPIIMKFLA 264
Query: 320 ASEKK 324
++
Sbjct: 265 EERQR 269
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid [Energy metabolism, Other]. Length = 276 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 4e-06
Identities = 40/173 (23%), Positives = 57/173 (32%), Gaps = 46/173 (26%)
Query: 24 GIKIFYRTY-GRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G ++ YRT+ P K V+L+ GL + LA
Sbjct: 19 GTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAA------------------- 59
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL--------GWKQAHVF 132
G +V A D RG GRS P + + D + +D +
Sbjct: 60 ---RGFDVYALDLRGHGRS--PRGQRGHVD--SFADYVDDLDAFVETIAEPDPGLPVFLL 112
Query: 133 GHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185
GHSMG +IA A P R+ L L + P L L + + R
Sbjct: 113 GHSMGGLIALLYLARYPPRIDGLVLSS---------PALGLGGAILRLILARL 156
|
Length = 298 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 5e-06
Identities = 29/123 (23%), Positives = 43/123 (34%), Gaps = 32/123 (26%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+L+ G G +A+ P + LA G V A D G G
Sbjct: 2 VVLLHGAGGDPEAYAPLARALAS----------------------RGYNVVAVDYPGHGA 39
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158
S A+ V+A L ++ + GHS+G +A LAA P ++ L
Sbjct: 40 S---------LGAPDAEAVLADAP-LDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLA 89
Query: 159 NVT 161
Sbjct: 90 AGD 92
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
AG V D+ G +S V + + A+ V LMD L ++AH+ G+SMG A
Sbjct: 59 AGYRVILKDSPGFNKSDAVVMDEQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALN 117
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189
A P+R+ L L+ G G + ++ + + + + + E
Sbjct: 118 FALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYE 163
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 2e-05
Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 25/132 (18%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
GP ++L+ G + +W + LA V A D
Sbjct: 28 GPL-LLLLHGTGASTHSWRDLMPPLA-----------------------RSFRVVAPDLP 63
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLS 154
G G + P + +T MA+D+ AL G V GHS GA IA +LA P
Sbjct: 64 GHGFTRAP-FRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRM 122
Query: 155 LALLNVTGGGFQ 166
+ +N F+
Sbjct: 123 VVGINAALMPFE 134
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 3e-05
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 27/119 (22%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G+++ +G PT V+L+ G H+ W LA
Sbjct: 11 DGVRLAVYEWGDPDRPT-VVLVHGYPDNHEVWDGVAPLLA-------------------- 49
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGA 138
V A+D RG GRSS P + YT +A D A++D + + H+ H G+
Sbjct: 50 ---DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGS 105
|
Length = 582 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 26/144 (18%)
Query: 22 DNGIKIFYRTYGRGP-TKVILI-TGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
D G +F +T G G K++L+ G +H+ ++ +L++
Sbjct: 10 DGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYL--------------ENLRELLKEE--- 52
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHSMG 137
G EV +D G G S P E +T ++ + + LG + ++ GHS G
Sbjct: 53 -----GREVIMYDQLGCGYSDQPDDSDEELWTIDYFVDELEEVREKLGLDKFYLLGHSWG 107
Query: 138 AMIACKLAAMVPERVLSLALLNVT 161
M+A + A + + L + ++
Sbjct: 108 GMLAQEYALKYGQHLKGLIISSML 131
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIA-LMDHLGWKQAHVFGHSMGAMIA 141
G A D G G S P Y + +A+ ++A L+D LG + + G+SMG IA
Sbjct: 26 GPHFRCLAIDLPGHGSSQSPSDIERYDFEEIAQLLLATLLDQLGIEPFFLVGYSMGGRIA 85
Query: 142 CKLAAMVPERVLSLAL 157
A PERV L L
Sbjct: 86 LYYALQYPERVQGLIL 101
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 47/261 (18%)
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
+V A D G G S + EY + V + + + A + G+S+G A A
Sbjct: 114 KVYALDLLGFGWSDKAL--IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAV 171
Query: 147 MVPERVLSLALLNVTGGGFQCC----PKLDLQTLSIAIRFF------------------R 184
PE V +ALLN + G F + + ++ RF +
Sbjct: 172 GYPELVAGVALLN-SAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQ 230
Query: 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244
AK P + +V + + +++Y+ V+ I+ N G+++
Sbjct: 231 AKQPSRIESVLKSVYKDKSNVDDYL-------------VESITEPAADPN---AGEVYYR 274
Query: 245 WMHK-MTQKDIQTIRSAGFLVS----VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGG 299
M + + + T+ S +S ++ G D A ++ + YP +++L G
Sbjct: 275 LMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKI-KAFYPDTTLVNLQAG 333
Query: 300 HLVSHERTEEVNQALIDLIKA 320
H E E+VN+AL++ + +
Sbjct: 334 HCPHDEVPEQVNKALLEWLSS 354
|
Length = 354 |
| >gnl|CDD|190521 pfam03096, Ndr, Ndr family | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 19/69 (27%), Positives = 27/69 (39%)
Query: 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155
G +S P + +A + ++DH K G GA I + A PERV L
Sbjct: 68 DGAASFPGGYPYPSLDDLADMIPVVLDHFRLKSVIGMGVGAGAYILARFALKHPERVEGL 127
Query: 156 ALLNVTGGG 164
L+N
Sbjct: 128 VLINPDPNA 136
|
This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). Length = 284 |
| >gnl|CDD|130316 TIGR01249, pro_imino_pep_1, proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 26/67 (38%), Positives = 33/67 (49%)
Query: 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150
FD RG G+S+ E TT + D+ L + LG K VFG S G+ +A A PE
Sbjct: 59 FDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE 118
Query: 151 RVLSLAL 157
V L L
Sbjct: 119 VVTGLVL 125
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. Length = 306 |
| >gnl|CDD|233393 TIGR01392, homoserO_Ac_trn, homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 23 NGIKIFYRTYGR---GPTKVILI----TG---LAGTHDAWGPQL-KGLAGTDKPNDDDE- 70
+ +++ Y TYG + +L+ TG +AG HD P L G + D D
Sbjct: 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRY 73
Query: 71 -TILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ- 128
+ + + G G R G + T + K L+DHLG +Q
Sbjct: 74 FVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLI-----TIRDDVKAQKLLLDHLGIEQI 128
Query: 129 AHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161
A V G SMG M A + A PERV ++ +L +
Sbjct: 129 AAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes [Amino acid biosynthesis, Aspartate family]. Length = 351 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V A D G GRS P ++ +YT + + + + L + G +I
Sbjct: 71 AAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGL 130
Query: 143 KLAAMVPERVLSLALLN 159
+LAA P+R L + N
Sbjct: 131 RLAAEHPDRFARLVVAN 147
|
Length = 302 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 405 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.98 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.98 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.98 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.97 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.97 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.97 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.97 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.96 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.96 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.96 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.96 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.96 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.96 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.96 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.96 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.96 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.95 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.95 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.95 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.94 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.94 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.94 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.94 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.94 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.93 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.93 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.92 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.91 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.91 | |
| PLN02511 | 388 | hydrolase | 99.91 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.88 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.88 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.87 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.87 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.86 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.85 | |
| PRK10566 | 249 | esterase; Provisional | 99.85 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.85 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.85 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.84 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.83 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.83 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.8 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.8 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.79 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.79 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.77 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.75 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.73 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.73 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.72 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.7 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.7 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.67 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.67 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.66 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.66 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.66 | |
| PLN00021 | 313 | chlorophyllase | 99.64 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.64 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.61 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.61 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.59 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.58 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.58 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.56 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.53 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.53 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.52 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.51 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.5 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.5 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.49 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.48 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.47 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.47 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.44 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.42 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.39 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.38 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.38 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.31 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.31 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.3 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.3 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.29 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.28 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.28 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.27 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.24 | |
| PRK10115 | 686 | protease 2; Provisional | 99.23 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.22 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.19 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.18 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.17 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.16 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.16 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.11 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.09 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.08 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.08 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.07 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.05 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.99 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.98 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.97 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.96 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.96 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.94 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.89 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.86 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.83 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.83 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.82 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.79 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.77 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.76 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.76 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.74 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.71 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.7 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.69 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.64 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.63 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.62 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.59 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.57 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.56 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.55 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.55 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.49 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.4 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.39 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.38 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.33 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.27 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.24 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.2 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.2 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.2 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.19 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.1 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.1 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.99 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.98 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.93 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.91 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.88 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.82 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.8 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.79 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.79 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.78 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.74 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 97.67 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 97.64 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.64 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.63 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.58 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.58 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.57 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.55 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.54 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.52 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.51 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.4 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 97.11 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.1 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.03 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.99 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.94 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 96.76 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 96.64 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.63 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.62 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.59 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.51 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 96.38 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.35 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.11 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 95.86 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 95.85 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.83 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.8 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 95.76 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 95.4 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 95.09 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 95.06 | |
| PLN02162 | 475 | triacylglycerol lipase | 94.92 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 94.85 | |
| PLN00413 | 479 | triacylglycerol lipase | 94.85 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 94.63 | |
| PLN02571 | 413 | triacylglycerol lipase | 94.28 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.28 | |
| PLN02454 | 414 | triacylglycerol lipase | 94.16 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.71 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 93.7 | |
| PLN02408 | 365 | phospholipase A1 | 93.23 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 93.04 | |
| PLN02310 | 405 | triacylglycerol lipase | 92.84 | |
| PLN02934 | 515 | triacylglycerol lipase | 92.73 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 92.49 | |
| PLN02324 | 415 | triacylglycerol lipase | 92.13 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 91.9 | |
| PLN02802 | 509 | triacylglycerol lipase | 91.52 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 91.28 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 91.16 | |
| PLN02753 | 531 | triacylglycerol lipase | 91.07 | |
| PLN02719 | 518 | triacylglycerol lipase | 90.85 | |
| PLN02761 | 527 | lipase class 3 family protein | 90.72 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 89.86 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 89.67 | |
| PLN02847 | 633 | triacylglycerol lipase | 88.63 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 88.59 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 86.93 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 86.72 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 84.48 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 80.72 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=266.68 Aligned_cols=275 Identities=20% Similarity=0.225 Sum_probs=182.4
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..++++++|.+++|...|++.|+|||+||+++++..|..+++.|.+ .|+|+++|+||
T Consensus 9 ~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~DlpG 65 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAK-----------------------SHRVYAIDLLG 65 (294)
T ss_pred CCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHh-----------------------CCeEEEEcCCC
Confidence 3667899999999999996446899999999999999999999987 68999999999
Q ss_pred CCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC--C
Q 015550 96 MGRSSVPVK-----KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--C 168 (405)
Q Consensus 96 ~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~ 168 (405)
||.|+.+.. ...++++++++|+.+++++++.++++++||||||++++.+|.++|++|+++|++++...+... .
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~ 145 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQ 145 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccccccc
Confidence 999986542 136899999999999999999999999999999999999999999999999999986432211 1
Q ss_pred ccchhHHHHHHHHHhhccChhhhh-ccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRA-AVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
+.............+......... ............+...+... .........+. ....... ..........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~ 219 (294)
T PLN02824 146 PWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAIL----RPGLEPG--AVDVFLDFIS 219 (294)
T ss_pred chhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHH----hccCCch--HHHHHHHHhc
Confidence 111111111111111100000000 00000000001111111111 11111111111 1111100 0001111111
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
........+.+.++++|+|+|+|++|.++|.+.++.+.+.. ++++++++++ ||++++|+|+++++.|.+|+++
T Consensus 220 ~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 220 YSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred cccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 11111223457788999999999999999999999877754 7789999997 9999999999999999999975
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=252.60 Aligned_cols=276 Identities=28% Similarity=0.357 Sum_probs=188.5
Q ss_pred CCcccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.-++++.+|++++|.+.|+ +.|.|+++||++.+..+|+.++..|+. +||+|+|+|+|
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~----------------------~~~rviA~Dlr 80 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLAS----------------------RGYRVIAPDLR 80 (322)
T ss_pred ceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhh----------------------cceEEEecCCC
Confidence 4466889999999999997 567899999999999999999999998 48999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|+|.|+.|.....|++..++.|+..++++++.++++++||+||+++|+.+|..+|++|+++|+++.+.. .|.....
T Consensus 81 GyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~----~p~~~~~ 156 (322)
T KOG4178|consen 81 GYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP----NPKLKPL 156 (322)
T ss_pred CCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC----Ccccchh
Confidence 999999999888999999999999999999999999999999999999999999999999999998864 1222211
Q ss_pred HHHHHHHHhhccChhhhhccCccc----ccCHhHHHhhhCC----------------CchhHHHHHHHHhhhhhccccCc
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDT----HYSQEYLEEYVGS----------------STRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
........................ ...+.....+... .....+..+.+...+...+....
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp 236 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP 236 (322)
T ss_pred hhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc
Confidence 111111100000000000000000 0011111110000 00112222333333333332223
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCe-EEEEcCC-CccccccCHHHHHH
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVA-RMIDLPG-GHLVSHERTEEVNQ 312 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~-~l~~~~g-gH~~~~e~p~~v~~ 312 (405)
+.+.+.+...|. ...-.+.++++||++|+|+.|.+.+........++..+.. +.++++| ||+++.|+|++|++
T Consensus 237 lNyyrn~~r~w~-----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~ 311 (322)
T KOG4178|consen 237 LNYYRNFRRNWE-----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQ 311 (322)
T ss_pred chhhHHHhhCch-----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHH
Confidence 333333322221 1123456789999999999999998774444554444554 6777787 99999999999999
Q ss_pred HHHHHHHhhc
Q 015550 313 ALIDLIKASE 322 (405)
Q Consensus 313 ~i~~fl~~~~ 322 (405)
.|.+|+++..
T Consensus 312 ~i~~f~~~~~ 321 (322)
T KOG4178|consen 312 AILGFINSFS 321 (322)
T ss_pred HHHHHHHhhc
Confidence 9999998753
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=255.37 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=180.1
Q ss_pred ccccCCEEEEEEEc--cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 19 ALNDNGIKIFYRTY--GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 19 ~~~~~g~~i~y~~~--G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
++.++|.+++|... |+++++|||+||++++...|.++++.|.+ +|+|+++|+|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~ 62 (276)
T TIGR02240 6 TIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-----------------------DLEVIAFDVPGV 62 (276)
T ss_pred EeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-----------------------CceEEEECCCCC
Confidence 46779999999775 34556799999999999999999999987 899999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|+.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|+++++..... .+..... .
T Consensus 63 G~S~~~~--~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~-~ 138 (276)
T TIGR02240 63 GGSSTPR--HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVM-VPGKPKV-L 138 (276)
T ss_pred CCCCCCC--CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCcccc-CCCchhH-H
Confidence 9998654 3689999999999999999999999999999999999999999999999999998753210 0111000 0
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
.. ... ................+....... .......+........ ...+.... . ........+.
T Consensus 139 ---~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~---~-~~~~~~~~~~ 202 (276)
T TIGR02240 139 ---MM-MAS--PRRYIQPSHGIHIAPDIYGGAFRR---DPELAMAHASKVRSGG---KLGYYWQL---F-AGLGWTSIHW 202 (276)
T ss_pred ---HH-hcC--chhhhccccccchhhhhccceeec---cchhhhhhhhhcccCC---CchHHHHH---H-HHcCCchhhH
Confidence 00 000 000000000000000000000000 0011111111111100 00010000 0 0111222355
Q ss_pred hhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhcCCC
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~~~~ 325 (405)
++++++|+|+|+|++|.++|++..+++.+.+ ++++++++++||+++.|+|+++++.|.+|+++.....
T Consensus 203 l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~-~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 270 (276)
T TIGR02240 203 LHKIQQPTLVLAGDDDPIIPLINMRLLAWRI-PNAELHIIDDGHLFLITRAEAVAPIIMKFLAEERQRA 270 (276)
T ss_pred hhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC-CCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhhhhc
Confidence 7889999999999999999999999999987 8899999988999999999999999999999877653
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=258.16 Aligned_cols=274 Identities=16% Similarity=0.195 Sum_probs=178.5
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+.++++.+|.+++|.+.|+++ +|||+||++++...|..+++.|.+ .++|+++|+|
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~D~~ 62 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGD-PIVFLHGNPTSSYLWRNIIPHLAG-----------------------LGRCLAPDLI 62 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCC-EEEEECCCCCCHHHHHHHHHHHhh-----------------------CCEEEEEcCC
Confidence 3456688899999999999765 699999999999999999999987 5699999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|||.|+.+.. .++.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.... .........
T Consensus 63 G~G~S~~~~~--~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~-~~~~~~~~~ 139 (295)
T PRK03592 63 GMGASDKPDI--DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRP-MTWDDFPPA 139 (295)
T ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCC-cchhhcchh
Confidence 9999987654 6899999999999999999999999999999999999999999999999999974321 111111111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC---chhHHHHHHHHhhhhhccc-cCcccchhh------hHHh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS---TRRAILYQEYVKGISATGM-QSNYGFDGQ------IHAC 244 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~ 244 (405)
.......+........... ....+....+... ...+.....+...+..... .....+... ....
T Consensus 140 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (295)
T PRK03592 140 -VRELFQALRSPGEGEEMVL-----EENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADV 213 (295)
T ss_pred -HHHHHHHHhCccccccccc-----chhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhh
Confidence 1111111111110000000 0001111111100 0011111111111110000 000000000 0000
Q ss_pred hhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
. ....+....+.++++|+|+|+|++|.++++....++...+.++++++++++ ||+++.|+|+++++.|.+|+++...
T Consensus 214 ~--~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 214 V--ALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred H--hhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 0 001112344677899999999999999955555555544448899999987 9999999999999999999987653
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=256.78 Aligned_cols=270 Identities=17% Similarity=0.181 Sum_probs=176.8
Q ss_pred CCCcccccCC-----EEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 15 APDAALNDNG-----IKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 15 ~~~~~~~~~g-----~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
-..++++.++ .+|+|.+.|+ ..|+|||+||++++...|..+++.|.+ +||+|
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~----------------------~gy~v 76 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAA----------------------AGHRV 76 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHh----------------------CCCEE
Confidence 3567788888 8999999986 346799999999999999999999986 38999
Q ss_pred EEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+++|+||||.|+.+.....++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++........
T Consensus 77 i~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 156 (302)
T PRK00870 77 IAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP 156 (302)
T ss_pred EEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc
Confidence 99999999999876544468999999999999999999999999999999999999999999999999998642111100
Q ss_pred ccchhHHHHHHHHHhhccCh---hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTP---EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.. ........+...... ..............+....+...... ... ......... .. ........
T Consensus 157 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~--~~-~~~~~~~~---- 224 (302)
T PRK00870 157 MP---DAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPD-ESY-KAGARAFPL--LV-PTSPDDPA---- 224 (302)
T ss_pred ch---HHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCC-hhh-hcchhhhhh--cC-CCCCCCcc----
Confidence 00 001101111000000 00000000001111111111100000 000 000000000 00 00000000
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeE---EEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR---MIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~---l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..........+.++++|+++|+|++|.++|... +.+.+.+ ++++ ++++++ ||++++|+|+++++.|.+|++++
T Consensus 225 -~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 225 -VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred -hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 000111234567899999999999999999866 7788876 6665 888998 99999999999999999999764
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=257.98 Aligned_cols=274 Identities=20% Similarity=0.235 Sum_probs=175.6
Q ss_pred CcccccCCE-EEEEEEccCC-----CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 17 DAALNDNGI-KIFYRTYGRG-----PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 17 ~~~~~~~g~-~i~y~~~G~~-----~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+++.++|. +++|.+.|++ .|+|||+||++++...|.+++..|.+ +|+|++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via 119 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-----------------------NYTVYA 119 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEE
Confidence 344667777 9999999975 36799999999999999999999987 899999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh-CCcccceEEEeccCCCCCCCCc
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~ 169 (405)
+|+||||.|+.+.. ..++++++++++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++.+..... .
T Consensus 120 ~Dl~G~G~S~~~~~-~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~-~ 197 (360)
T PLN02679 120 IDLLGFGASDKPPG-FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNK-A 197 (360)
T ss_pred ECCCCCCCCCCCCC-ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccc-c
Confidence 99999999987643 368999999999999999999999999999999999998874 79999999999986422111 0
Q ss_pred cchhHHHH------HHHHHhhccChhhhhccC--cccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhh
Q 015550 170 KLDLQTLS------IAIRFFRAKTPEKRAAVD--LDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 170 ~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
........ ....++............ .........+...+... ...+...+.+....... .....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 271 (360)
T PLN02679 198 VVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDE------GALDA 271 (360)
T ss_pred ccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCC------ChHHH
Confidence 00000000 000000000000000000 00000000111111110 01111111111100000 00011
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHH-----HHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHH
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY-----ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~-----~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i 314 (405)
+..........+....+.++++|||+|+|++|.++|++. .+.+.+.+ ++++++++++ ||++++|+|+++++.|
T Consensus 272 ~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 272 FVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred HHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHH
Confidence 111111111122345677889999999999999998763 23455555 8999999998 9999999999999999
Q ss_pred HHHHHhhc
Q 015550 315 IDLIKASE 322 (405)
Q Consensus 315 ~~fl~~~~ 322 (405)
.+||++..
T Consensus 351 ~~FL~~~~ 358 (360)
T PLN02679 351 LPWLAQLP 358 (360)
T ss_pred HHHHHhcC
Confidence 99998643
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=254.37 Aligned_cols=273 Identities=19% Similarity=0.214 Sum_probs=177.5
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
+++..+|.+++|.+.|+++ +|||+||++++...|..+++.|.+ +|+|+++|+||||
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~-~vvliHG~~~~~~~w~~~~~~l~~-----------------------~~~v~~~D~~G~G 124 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGL-PIVLIHGFGASAFHWRYNIPELAK-----------------------KYKVYALDLLGFG 124 (354)
T ss_pred eEEEECCEEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCCC
Confidence 5567789999999999775 599999999999999999999987 8999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch-----
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD----- 172 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----- 172 (405)
.|+.+.. .|+.+.+++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++.+..........
T Consensus 125 ~S~~~~~--~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~ 202 (354)
T PLN02578 125 WSDKALI--EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVV 202 (354)
T ss_pred CCCCccc--ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccccccccccc
Confidence 9987653 789999999999999999989999999999999999999999999999999997643211000000
Q ss_pred -hHHH-----HHHHHHhhccChhhhhccCcccccCHhHHHhhhCC-CchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 173 -LQTL-----SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 173 -~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.... ............................+...+.. ....+...+.+...... ......+...+....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 280 (354)
T PLN02578 203 EETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAAD--PNAGEVYYRLMSRFL 280 (354)
T ss_pred ccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccC--CchHHHHHHHHHHHh
Confidence 0000 00000000000000000000000000000000110 00011111111110000 000000011111111
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~ 319 (405)
......+..+.+.++++|+++|+|++|.+++.+.++++.+.+ ++++++++++||+++.|+|+++++.|.+|++
T Consensus 281 ~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~-p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 281 FNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY-PDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred cCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 111122234567889999999999999999999999999876 8999999977999999999999999999985
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=240.27 Aligned_cols=248 Identities=19% Similarity=0.185 Sum_probs=163.3
Q ss_pred EEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 26 ~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
.++|...|+|+|+|||+||++++...|.++++.|.+ .|+|+++|+||||.|+.+.
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~~-- 57 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGFG-- 57 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-----------------------CCEEEEecCCCCCCCCCCC--
Confidence 378999999887899999999999999999999987 8999999999999997543
Q ss_pred CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC--CCccchhHHHHHHHHHh
Q 015550 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ--CCPKLDLQTLSIAIRFF 183 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~ 183 (405)
.++.+++++++.+ +..++++++||||||.+|+.+|.++|++|+++|++++.+.... ..+.............+
T Consensus 58 -~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (256)
T PRK10349 58 -ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQL 132 (256)
T ss_pred -CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHH
Confidence 5688777777653 5678999999999999999999999999999999998643211 11111111111111101
Q ss_pred hccChhhhhccCcccccCHhHHHhh-hCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEY-VGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
..... .....++... ......... ...+...+....... ..............+..+.+.++++
T Consensus 133 ~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~ 197 (256)
T PRK10349 133 SDDFQ----------RTVERFLALQTMGTETARQD-ARALKKTVLALPMPE----VDVLNGGLEILKTVDLRQPLQNVSM 197 (256)
T ss_pred HhchH----------HHHHHHHHHHHccCchHHHH-HHHHHHHhhccCCCc----HHHHHHHHHHHHhCccHHHHhhcCC
Confidence 00000 0001111100 011111111 111111111100000 0001100000011233456788999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
|||+|+|++|.++|.+.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+|-.
T Consensus 198 P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 198 PFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CeEEEecCCCccCCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999998888876 9999999998 999999999999999999854
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-30 Score=248.88 Aligned_cols=276 Identities=16% Similarity=0.173 Sum_probs=170.0
Q ss_pred ccCCEEEEEEEccCC--------CCeEEEEecCCCCCCchh--hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 21 NDNGIKIFYRTYGRG--------PTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~--------~p~vvllHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
..+|.+++|.+.|++ .|+|||+||++++...|. .+.+.|.... ..+..++|+||+
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~---------------~~l~~~~~~Via 110 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPG---------------QPLDASKYFIIL 110 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCC---------------CcccccCCEEEE
Confidence 468999999999974 467999999999988875 4555542100 011124899999
Q ss_pred ecCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHH-HHhCCccEE-EEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 91 FDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALM-DHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l-~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
+|+||||.|+.+... ..|+++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++.+.
T Consensus 111 ~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~ 190 (360)
T PRK06489 111 PDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPT 190 (360)
T ss_pred eCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcc
Confidence 999999999865431 1478999999988854 889999986 899999999999999999999999999987632
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHH-----------hh-hCCCc--hhHHHHHHHHhhhhhc
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-----------EY-VGSST--RRAILYQEYVKGISAT 229 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~--~~~~~~~~~~~~~~~~ 229 (405)
.... .................................... .+ ..... ................
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T PRK06489 191 EMSG---RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTA 267 (360)
T ss_pred cccH---HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhc
Confidence 1110 000000000011100000000000000000000000 00 00000 0001111111110000
Q ss_pred cccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHH--HHHHHHhCCCeEEEEcCC-----Cccc
Q 015550 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA--RRLAEKLYPVARMIDLPG-----GHLV 302 (405)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~--~~l~~~l~~~~~l~~~~g-----gH~~ 302 (405)
.... +...+......+..+.+.++++|||+|+|++|.++|++.+ +++++.+ |+++++++++ ||.+
T Consensus 268 ------~~~~-~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~ 339 (360)
T PRK06489 268 ------DAND-FLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGT 339 (360)
T ss_pred ------CHHH-HHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCccc
Confidence 0000 1011111112234567888999999999999999999875 7888876 9999999986 9999
Q ss_pred cccCHHHHHHHHHHHHHhhcC
Q 015550 303 SHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 303 ~~e~p~~v~~~i~~fl~~~~~ 323 (405)
+ ++|+++++.|.+||++..+
T Consensus 340 ~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 340 T-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred c-cCHHHHHHHHHHHHHhccc
Confidence 7 8999999999999987653
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=239.96 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=163.0
Q ss_pred CEEEEEEEccCCCCeEEEEecCCCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 24 g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
+.+++|...|+++ +|||+||++++...|..+ +..+.+ +||+|+++|+||||.|+
T Consensus 19 ~~~~~y~~~g~~~-~ivllHG~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~G~S~ 75 (282)
T TIGR03343 19 NFRIHYNEAGNGE-AVIMLHGGGPGAGGWSNYYRNIGPFVD----------------------AGYRVILKDSPGFNKSD 75 (282)
T ss_pred ceeEEEEecCCCC-eEEEECCCCCchhhHHHHHHHHHHHHh----------------------CCCEEEEECCCCCCCCC
Confidence 6779999999764 699999999988888654 344544 38999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (405)
.+......+ ..+++|+.+++++++.++++++||||||++++.+|.++|++|+++|++++....................
T Consensus 76 ~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T TIGR03343 76 AVVMDEQRG-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLF 154 (282)
T ss_pred CCcCccccc-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHH
Confidence 653211122 2578999999999999999999999999999999999999999999999763221101001101111111
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhh-CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh-hcccChhhhhhhh
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-MHKMTQKDIQTIR 258 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 258 (405)
............ .++.... ..........+......... ............ ......+..+.++
T Consensus 155 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~ 220 (282)
T TIGR03343 155 KLYAEPSYETLK----------QMLNVFLFDQSLITEELLQGRWENIQRQ----PEHLKNFLISSQKAPLSTWDVTARLG 220 (282)
T ss_pred HHhcCCCHHHHH----------HHHhhCccCcccCcHHHHHhHHHHhhcC----HHHHHHHHHhccccccccchHHHHHh
Confidence 111110000000 0000000 00000000000000000000 000000000000 0000112335578
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
++++|+|+|+|++|.+++++.++++++.+ ++++++++++ ||+++.|+|+++++.|.+|++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~-~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNM-PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhC-CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 89999999999999999999999999987 9999999998 999999999999999999985
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.8e-31 Score=237.86 Aligned_cols=239 Identities=14% Similarity=0.124 Sum_probs=159.9
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
+|||+||++.+...|..+++.|.+ ++|+|+++|+||||.|+.+.. ..++++++++|+
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~----------------------~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl 61 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDA----------------------AGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPL 61 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhh----------------------CCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHH
Confidence 599999999999999999999955 399999999999999976543 367899999999
Q ss_pred HHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc---
Q 015550 118 IALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA--- 193 (405)
Q Consensus 118 ~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 193 (405)
.++++.++. ++++++||||||.+++.+|.++|++|+++|++++......... ..... ...... ......
T Consensus 62 ~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~---~~~~~~-~~~~~~~~~ 134 (255)
T PLN02965 62 FALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSII---SPRLK---NVMEGT-EKIWDYTFG 134 (255)
T ss_pred HHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCc---cHHHH---hhhhcc-ccceeeeec
Confidence 999999987 4999999999999999999999999999999998632110000 00000 000000 000000
Q ss_pred --cCcc--c-ccCHhHHHhhh-CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEE
Q 015550 194 --VDLD--T-HYSQEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (405)
Q Consensus 194 --~~~~--~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi 267 (405)
.... . ....++....+ ........ ......+....... ... . .+....+..+++|+++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~-----~-~~~~~~~~~i~vP~lvi 199 (255)
T PLN02965 135 EGPDKPPTGIMMKPEFVRHYYYNQSPLEDY--TLSSKLLRPAPVRA-------FQD-----L-DKLPPNPEAEKVPRVYI 199 (255)
T ss_pred cCCCCCcchhhcCHHHHHHHHhcCCCHHHH--HHHHHhcCCCCCcc-------hhh-----h-hhccchhhcCCCCEEEE
Confidence 0000 0 00111211111 11111100 00001110000000 000 0 01112345688999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+|++|.++|++.++.+++.+ ++++++++++ ||++++|+|++|++.|.+|++...
T Consensus 200 ~g~~D~~~~~~~~~~~~~~~-~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 200 KTAKDNLFDPVRQDVMVENW-PPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred EcCCCCCCCHHHHHHHHHhC-CcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999987 8999999987 999999999999999999987653
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=235.87 Aligned_cols=268 Identities=20% Similarity=0.232 Sum_probs=175.4
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
+.++++|.+++|.+.|+ +.|+|||+||++++...|..+++.|.+ +|+|+++|+|||
T Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~ 65 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-----------------------SFRVVAPDLPGH 65 (278)
T ss_pred ceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-----------------------CcEEEeecCCCC
Confidence 45788999999999987 357899999999999999999999987 899999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|+.+.. ..++++++++|+.+++++++.++++++||||||++++.+|..+|++++++|++++................
T Consensus 66 G~S~~~~~-~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 144 (278)
T TIGR03056 66 GFTRAPFR-FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYM 144 (278)
T ss_pred CCCCCccc-cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchh
Confidence 99986654 36899999999999999999999999999999999999999999999999999876422111000000000
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
..... ............................. ........+....... ........ .............
T Consensus 145 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~ 215 (278)
T TIGR03056 145 ARVLA-CNPFTPPMMSRGAADQQRVERLIRDTGSL--LDKAGMTYYGRLIRSP-----AHVDGALS-MMAQWDLAPLNRD 215 (278)
T ss_pred hHhhh-hcccchHHHHhhcccCcchhHHhhccccc--cccchhhHHHHhhcCc-----hhhhHHHH-Hhhcccccchhhh
Confidence 00000 00000000000000000000000000000 0000001110000000 00000000 0000001112245
Q ss_pred hhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
++++++|+++|+|++|.++|++..+.+.+.+ ++++++.+++ ||+++.|.|+++++.|.+|++
T Consensus 216 ~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 216 LPRITIPLHLIAGEEDKAVPPDESKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cccCCCCEEEEEeCCCcccCHHHHHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 6778999999999999999999999998876 8899999998 999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=251.21 Aligned_cols=270 Identities=19% Similarity=0.274 Sum_probs=169.7
Q ss_pred cccCCEEEEEEEccCC----CCeEEEEecCCCCCCchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIKIFYRTYGRG----PTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~----~p~vvllHG~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+.++.+++|...|+. +|+|||+||++++...|.. +++.|.+. .+++|+|+++|+|
T Consensus 181 ~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~-------------------~~~~yrVia~Dl~ 241 (481)
T PLN03087 181 LSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDA-------------------AKSTYRLFAVDLL 241 (481)
T ss_pred EeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHH-------------------hhCCCEEEEECCC
Confidence 4467899999999863 3689999999999999985 44666520 0138999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
|||.|+.+.. ..|+++++++++. .++++++.++++++||||||++++.+|.++|++|+++|+++++..... ....
T Consensus 242 G~G~S~~p~~-~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~---~~~~ 317 (481)
T PLN03087 242 GFGRSPKPAD-SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVP---KGVQ 317 (481)
T ss_pred CCCCCcCCCC-CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccc---cchh
Confidence 9999987643 4689999999995 899999999999999999999999999999999999999997642211 1000
Q ss_pred HHHHHHHHHhhccC--hhhhhccCccccc----------------CHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcc
Q 015550 174 QTLSIAIRFFRAKT--PEKRAAVDLDTHY----------------SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (405)
Q Consensus 174 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
. ............ +..........++ ..+.+..............+.+..... ..
T Consensus 318 ~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~------~~ 390 (481)
T PLN03087 318 A-TQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTH------NA 390 (481)
T ss_pred H-HHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccc------hh
Confidence 0 000000000000 0000000000000 000000000000000000000000000 00
Q ss_pred cchhhhHHhhhc-c-cChhhhh-hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Cccccc-cCHHHH
Q 015550 236 GFDGQIHACWMH-K-MTQKDIQ-TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-ERTEEV 310 (405)
Q Consensus 236 ~~~~~~~~~~~~-~-~~~~~~~-~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~-e~p~~v 310 (405)
.+ ..+...... . ...+.++ ...++++|+|+|+|++|.++|++..+.+++.+ |+++++++++ ||++++ |+|+++
T Consensus 391 ~~-~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~~f 468 (481)
T PLN03087 391 AW-HTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQKEF 468 (481)
T ss_pred hH-HHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHHHH
Confidence 00 000000000 0 0011122 23468999999999999999999999999987 9999999998 999886 999999
Q ss_pred HHHHHHHHHhh
Q 015550 311 NQALIDLIKAS 321 (405)
Q Consensus 311 ~~~i~~fl~~~ 321 (405)
++.|.+|++..
T Consensus 469 a~~L~~F~~~~ 479 (481)
T PLN03087 469 ARELEEIWRRS 479 (481)
T ss_pred HHHHHHHhhcc
Confidence 99999999654
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-31 Score=241.46 Aligned_cols=263 Identities=16% Similarity=0.203 Sum_probs=169.5
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
...++++++|.+++|...|++ |+|||+||++.+...|..+++.|.+ +|+|+++|+|
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~ 69 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRD-----------------------RFRCVAPDYL 69 (286)
T ss_pred ccceEEEcCCcEEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhC-----------------------CcEEEEECCC
Confidence 455678899999999999976 5699999999888889999999987 8999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|||.|+.+.. ..++.+++++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++...... .....
T Consensus 70 G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~ 145 (286)
T PRK03204 70 GFGLSERPSG-FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPAD---TLAMK 145 (286)
T ss_pred CCCCCCCCCc-cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCC---chhHH
Confidence 9999986653 3678999999999999999999999999999999999999999999999999886531110 00000
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc-ccChhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMTQKD 253 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 253 (405)
. ...+... .+....... .......++...... .........+........ ....+...... ......
T Consensus 146 ~---~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 213 (286)
T PRK03204 146 A---FSRVMSS-PPVQYAILR-RNFFVERLIPAGTEH-RPSSAVMAHYRAVQPNAA------ARRGVAEMPKQILAARPL 213 (286)
T ss_pred H---HHHHhcc-ccchhhhhh-hhHHHHHhccccccC-CCCHHHHHHhcCCCCCHH------HHHHHHHHHHhcchhhHH
Confidence 0 0010100 000000000 000000000000000 000011111111000000 00000000000 000000
Q ss_pred h----hhhh--hcCCcEEEEeecCCccCCHH-HHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 254 I----QTIR--SAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 254 ~----~~l~--~i~~Pvlvi~G~~D~~~~~~-~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
. ..+. .+++||++|+|++|.++++. ..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+
T Consensus 214 ~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 214 LARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 0 1111 12799999999999988654 567777876 8999999998 99999999999999999997
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=229.98 Aligned_cols=252 Identities=28% Similarity=0.419 Sum_probs=167.0
Q ss_pred EEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 27 i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
++|..+|+ +.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|..+.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~S~~~~ 57 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-----------------------RFHVVTYDHRGTGRSPGEL 57 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-----------------------ccEEEEEcCCCCCCCCCCC
Confidence 46778884 467899999999999999999998887 8999999999999998654
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHh
Q 015550 104 KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (405)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (405)
. ..++.+++++++.+++++++.++++++||||||++|+.+|.++|++|+++|++++..... + ...........++
T Consensus 58 ~-~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~---~-~~~~~~~~~~~~~ 132 (257)
T TIGR03611 58 P-PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD---P-HTRRCFDVRIALL 132 (257)
T ss_pred c-ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC---h-hHHHHHHHHHHHH
Confidence 3 468999999999999999999999999999999999999999999999999998753211 0 0000010111111
Q ss_pred hccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (405)
................+...++..... .......... ............ +......+....+.++++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~P 200 (257)
T TIGR03611 133 QHAGPEAYVHAQALFLYPADWISENAA------RLAADEAHAL-----AHFPGKANVLRR-INALEAFDVSARLDRIQHP 200 (257)
T ss_pred hccCcchhhhhhhhhhccccHhhccch------hhhhhhhhcc-----cccCccHHHHHH-HHHHHcCCcHHHhcccCcc
Confidence 110000000000000000011110000 0000000000 000000000000 0000111223456778999
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+++++|++|.++|++.++++.+.+ ++++++.+++ ||+++.++|+++++.|.+||+
T Consensus 201 ~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 201 VLLIANRDDMLVPYTQSLRLAAAL-PNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred EEEEecCcCcccCHHHHHHHHHhc-CCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999986 8899999987 999999999999999999985
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=237.76 Aligned_cols=261 Identities=19% Similarity=0.239 Sum_probs=172.8
Q ss_pred ccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.++.+|++++|.+.|+ ++|+|||+||++++...|+.+++.|.+ +|+|+++|+||||
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Via~DlpG~G 165 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-----------------------NYHAIAFDWLGFG 165 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCCC
Confidence 4678999999999996 357899999999999999999999987 8999999999999
Q ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 98 RSSVPVKK--TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 98 ~S~~~~~~--~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
.|+.+... ..++++++++++.+++++++.++++|+|||+||++++.+|.++|++|+++|++++....... ... ..
T Consensus 166 ~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~--~~p-~~ 242 (383)
T PLN03084 166 FSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA--KLP-ST 242 (383)
T ss_pred CCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc--cch-HH
Confidence 99876532 36899999999999999999999999999999999999999999999999999986421100 001 00
Q ss_pred HHHHHHHhh----ccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc--
Q 015550 176 LSIAIRFFR----AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM-- 249 (405)
Q Consensus 176 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (405)
.......+. ...+.... ...+.. .............+...+...+.. .......... +....
T Consensus 243 l~~~~~~l~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~-~~~l~~~~r~-~~~~l~~ 310 (383)
T PLN03084 243 LSEFSNFLLGEIFSQDPLRAS---------DKALTS-CGPYAMKEDDAMVYRRPYLTSGSS-GFALNAISRS-MKKELKK 310 (383)
T ss_pred HHHHHHHHhhhhhhcchHHHH---------hhhhcc-cCccCCCHHHHHHHhccccCCcch-HHHHHHHHHH-hhcccch
Confidence 110100000 00000000 000000 000000111111111111110000 0000000000 00000
Q ss_pred -Chhhhhhh--hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 250 -TQKDIQTI--RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 250 -~~~~~~~l--~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+....+ ..+++||++|+|++|.+++.+.++.+++. .+++++++++ ||++++|+|+++++.|.+|++
T Consensus 311 ~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 311 YIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS--SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred hhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh--cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 00000111 35789999999999999999998888885 4789999998 999999999999999999986
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=238.25 Aligned_cols=266 Identities=17% Similarity=0.195 Sum_probs=172.4
Q ss_pred CcccccCCEEEEEEEccC----CCCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 17 DAALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
...++.+|.+|+|..+++ .+++|||+||++++... |..++..|.+ +||+|+++
T Consensus 64 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~ 121 (349)
T PLN02385 64 SYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIAS----------------------SGYGVFAM 121 (349)
T ss_pred eeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHh----------------------CCCEEEEe
Confidence 345677999999999875 24579999999988764 6888888986 49999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc------cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK------QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
|+||||.|+.+.. ...+++++++|+.++++.+... +++|+||||||++++.+|.++|++|+++|++++.....
T Consensus 122 D~~G~G~S~~~~~-~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~ 200 (349)
T PLN02385 122 DYPGFGLSEGLHG-YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIA 200 (349)
T ss_pred cCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccc
Confidence 9999999986542 2458899999999999887542 79999999999999999999999999999999864321
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.... ................+.... .. ...+....+.... .... ..+ ..........+...... +
T Consensus 201 ~~~~--~~~~~~~~~~~~~~~~p~~~~-~~-----~~~~~~~~~~~~~-~~~~-~~~----~~~~~~~~~~~~~~~~~-l 265 (349)
T PLN02385 201 DDVV--PPPLVLQILILLANLLPKAKL-VP-----QKDLAELAFRDLK-KRKM-AEY----NVIAYKDKPRLRTAVEL-L 265 (349)
T ss_pred cccc--CchHHHHHHHHHHHHCCCcee-cC-----CCccccccccCHH-HHHH-hhc----CcceeCCCcchHHHHHH-H
Confidence 1110 000111111111110000000 00 0000000000000 0000 000 00000000000000000 0
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHH----HHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEE----VNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~----v~~~i~~fl~ 319 (405)
....+....+.++++|+|+|+|++|.++|++.++.+++.+. ++++++++++ ||+++.|+|++ +.+.|.+||+
T Consensus 266 --~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 266 --RTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred --HHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 00112334567889999999999999999999999998873 5789999998 99999998886 8888999998
Q ss_pred hhc
Q 015550 320 ASE 322 (405)
Q Consensus 320 ~~~ 322 (405)
+..
T Consensus 344 ~~~ 346 (349)
T PLN02385 344 SHS 346 (349)
T ss_pred Hhc
Confidence 764
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=229.00 Aligned_cols=248 Identities=20% Similarity=0.298 Sum_probs=164.3
Q ss_pred EEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 26 KIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 26 ~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
++.|..++. ++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~s~~ 58 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-----------------------DHDIIQVDMRNHGLSPR 58 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-----------------------CCeEEEECCCCCCCCCC
Confidence 455655432 446899999999999999999999987 89999999999999976
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
+. .++++++++|+.+++++++.++++++||||||++++.+|..+|++|+++|++++.+.... .............
T Consensus 59 ~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~--~~~~~~~~~~~~~ 133 (255)
T PRK10673 59 DP---VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH--VRRHDEIFAAINA 133 (255)
T ss_pred CC---CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc--chhhHHHHHHHHH
Confidence 43 579999999999999999999999999999999999999999999999999986532211 0000000000000
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcC
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (405)
....... ........+..... ...........+... ...+. ....+.........+.++.++
T Consensus 134 ~~~~~~~--------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (255)
T PRK10673 134 VSEAGAT--------TRQQAAAIMRQHLN----EEGVIQFLLKSFVDG----EWRFN--VPVLWDQYPHIVGWEKIPAWP 195 (255)
T ss_pred hhhcccc--------cHHHHHHHHHHhcC----CHHHHHHHHhcCCcc----eeEee--HHHHHHhHHHHhCCcccCCCC
Confidence 0000000 00000001111100 000111111111000 00000 000110000001123456678
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+|+|+|+|++|..++++..+.+.+.+ ++++++++++ ||++++++|+++++.|.+||++
T Consensus 196 ~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 196 HPALFIRGGNSPYVTEAYRDDLLAQF-PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhC-CCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999876 8999999998 9999999999999999999975
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=241.80 Aligned_cols=268 Identities=18% Similarity=0.208 Sum_probs=165.0
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCC------------chhhhHh---hhcCCCCCCCCchhhhccccCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHD------------AWGPQLK---GLAGTDKPNDDDETILQDSVESGDGGA 84 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~------------~~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (405)
...+|.+++|++.|++.+++||+||+.++.. .|.+++. .|.. +
T Consensus 41 ~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~----------------------~ 98 (343)
T PRK08775 41 AGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDP----------------------A 98 (343)
T ss_pred CCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCc----------------------c
Confidence 4568999999999974334777777766655 6888886 4632 2
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccE-EEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
+|+||++|+||||.|.. ..++.+++++|+.+++++++++++ +|+||||||++|+.+|.++|++|+++|++++...
T Consensus 99 ~~~Vi~~Dl~G~g~s~~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 99 RFRLLAFDFIGADGSLD----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred ccEEEEEeCCCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 89999999999998842 256889999999999999999775 7999999999999999999999999999998642
Q ss_pred CCCCCccchhHHHHHHHHHhhccC------hhh-h--hccCcccccCHhHHHhhhCCCch-----hHHHHHHHHhhhhhc
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKT------PEK-R--AAVDLDTHYSQEYLEEYVGSSTR-----RAILYQEYVKGISAT 229 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 229 (405)
.. +. .. ............. ... . ...........+.+...+..... .......+.......
T Consensus 175 ~~---~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 249 (343)
T PRK08775 175 AH---PY-AA-AWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQ 249 (343)
T ss_pred CC---HH-HH-HHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHH
Confidence 11 10 00 0110001100000 000 0 00000000011111111110000 000001011000000
Q ss_pred cccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC-C-CccccccCH
Q 015550 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G-GHLVSHERT 307 (405)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~-g-gH~~~~e~p 307 (405)
... .......... .... ......+.++++|+|+|+|++|.++|++..+++++.+.+++++++++ + ||++++|+|
T Consensus 250 ~~~-~~~~~~~~~~--~~~~-~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~P 325 (343)
T PRK08775 250 YVA-RTPVNAYLRL--SESI-DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKET 325 (343)
T ss_pred HHH-hcChhHHHHH--HHHH-hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCH
Confidence 000 0000000000 0000 00012357889999999999999999999999998876789999997 4 999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 015550 308 EEVNQALIDLIKASE 322 (405)
Q Consensus 308 ~~v~~~i~~fl~~~~ 322 (405)
++|++.|.+||++..
T Consensus 326 e~~~~~l~~FL~~~~ 340 (343)
T PRK08775 326 DRIDAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998765
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-29 Score=236.01 Aligned_cols=273 Identities=18% Similarity=0.143 Sum_probs=164.4
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhhhH---hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQL---KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
.+.+|.+++|.+.|+ ++|+||++||+++++..|..++ +.|.. ++|+||++|
T Consensus 21 ~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D 78 (339)
T PRK07581 21 ATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDP----------------------EKYFIIIPN 78 (339)
T ss_pred CCcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCc----------------------CceEEEEec
Confidence 456899999999996 2355777777777777776543 34543 389999999
Q ss_pred CCCCCCCCCCCCC-CCCCHH-----HHHHHHHH----HHHHhCCcc-EEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 93 NRGMGRSSVPVKK-TEYTTK-----IMAKDVIA----LMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 93 ~~G~G~S~~~~~~-~~~~~~-----~~~~dl~~----~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+||||.|+.+... ..++++ .+++|+.+ +++++++++ ++|+||||||++|+.+|.++|++|++||++++.
T Consensus 79 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 79 MFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 9999999765421 134433 25666655 778899999 589999999999999999999999999999876
Q ss_pred CCCCCCCccchhHHHHHHHHHhhccC----------hh-hhh---ccCcccccCHhHHHhhhCC-C--chhHHHHHHHHh
Q 015550 162 GGGFQCCPKLDLQTLSIAIRFFRAKT----------PE-KRA---AVDLDTHYSQEYLEEYVGS-S--TRRAILYQEYVK 224 (405)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~---~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 224 (405)
.... + ............+.... +. ... .......+...++...... . .........+..
T Consensus 159 ~~~~---~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (339)
T PRK07581 159 AKTT---P-HNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWE 234 (339)
T ss_pred CCCC---H-HHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHH
Confidence 4211 0 00000000110010000 00 000 0000000011111110000 0 000011111111
Q ss_pred hh-hhccccCcccchhhhHHhhhccc------ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC
Q 015550 225 GI-SATGMQSNYGFDGQIHACWMHKM------TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP 297 (405)
Q Consensus 225 ~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ 297 (405)
.. .... ...+...+........ ..+..+.++++++|||+|+|++|.++|++.++.+++.+ +++++++++
T Consensus 235 ~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i~ 310 (339)
T PRK07581 235 GNFLPRD---PNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPIE 310 (339)
T ss_pred HhhcccC---cccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEeC
Confidence 11 0000 0111111111111110 12345677889999999999999999999999999887 889999998
Q ss_pred C--CccccccCHHHHHHHHHHHHHhhc
Q 015550 298 G--GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 298 g--gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+ ||+++.++++++++.|.+||++.-
T Consensus 311 ~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 311 SIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CCCCccccccCcHHHHHHHHHHHHHHH
Confidence 4 999999999999999999998753
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-29 Score=230.19 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=168.2
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.+++||++|||+++...|+.++..|.+. .|+.|+++|++|+|.++..+....|+..+++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~---------------------~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v 115 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKA---------------------KGLRVLAIDLPGHGYSSPLPRGPLYTLRELV 115 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccc---------------------cceEEEEEecCCCCcCCCCCCCCceehhHHH
Confidence 3568999999999999999999999883 2599999999999965554444679999999
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhh---ccChhhh
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR---AKTPEKR 191 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 191 (405)
+.+..++....+++++++|||+||.+|+.+|+.+|+.|+++|+++-........+............+.. ...+...
T Consensus 116 ~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 195 (326)
T KOG1454|consen 116 ELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSL 195 (326)
T ss_pred HHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCcccc
Confidence 9999999999999999999999999999999999999999995552222221111111111111111111 1111000
Q ss_pred hccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc-cC--hhhhhhhhhcC-CcEEEE
Q 015550 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK-MT--QKDIQTIRSAG-FLVSVI 267 (405)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~l~~i~-~Pvlvi 267 (405)
. .....+...................+.....+.... ...+.......+... .. ......++++. ||+|++
T Consensus 196 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii 270 (326)
T KOG1454|consen 196 T--EPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPV---KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLII 270 (326)
T ss_pred c--cchhheeHhhhcceeeeccccccchhhhhhheeccc---ccchhhhheeeEEEeccCccchHHHhhccccCCceEEE
Confidence 0 000011111111111111111112222222111110 000000000000001 11 22334556666 999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+|+.|.++|.+.+..+.+++ ++++++++++ ||.+++|+|+++++.|..|+....
T Consensus 271 ~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 271 WGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred EcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999998 9999999997 999999999999999999998754
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-28 Score=228.59 Aligned_cols=274 Identities=13% Similarity=0.114 Sum_probs=172.7
Q ss_pred CcccccCCEEEEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 17 DAALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..++..+|.+++|..+++ ++++||++||++++...|..++..|.+ +||+|+++|+|
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~----------------------~g~~v~~~D~~ 90 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFH----------------------LGYDVLIIDHR 90 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHH----------------------CCCeEEEEcCC
Confidence 455678999999999875 456899999999988889999988876 49999999999
Q ss_pred CCCCCCCCCCC----CCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 95 GMGRSSVPVKK----TEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 95 G~G~S~~~~~~----~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
|||.|+.+... ...+++++++|+.++++++ +..+++++||||||.+++.+|.++|++|+++|+++|......
T Consensus 91 G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~ 170 (330)
T PRK10749 91 GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVL 170 (330)
T ss_pred CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCC
Confidence 99999754321 2358999999999999987 667999999999999999999999999999999988643211
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhc--cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhcccc-CcccchhhhHH
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAA--VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ-SNYGFDGQIHA 243 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 243 (405)
..+. ............. ...... .....+....+...... .....+..+.+.+...... ...........
T Consensus 171 ~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (330)
T PRK10749 171 PLPS---WMARRILNWAEGH-PRIRDGYAIGTGRWRPLPFAINVLT---HSRERYRRNLRFYADDPELRVGGPTYHWVRE 243 (330)
T ss_pred CCCc---HHHHHHHHHHHHh-cCCCCcCCCCCCCCCCCCcCCCCCC---CCHHHHHHHHHHHHhCCCcccCCCcHHHHHH
Confidence 1111 1111111111000 000000 00000000000000000 0111111111211111100 00000000000
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC------CCeEEEEcCC-CccccccCH---HHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY------PVARMIDLPG-GHLVSHERT---EEVNQA 313 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~------~~~~l~~~~g-gH~~~~e~p---~~v~~~ 313 (405)
.. .........+.++++|+|+|+|++|.+++++.++.+++.+. ++++++++++ ||.++.|.+ +.+.+.
T Consensus 244 ~~--~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~ 321 (330)
T PRK10749 244 SI--LAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNA 321 (330)
T ss_pred HH--HHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHH
Confidence 00 00011234567789999999999999999999998888662 4568999998 999998875 678889
Q ss_pred HHHHHHhh
Q 015550 314 LIDLIKAS 321 (405)
Q Consensus 314 i~~fl~~~ 321 (405)
|.+||++.
T Consensus 322 i~~fl~~~ 329 (330)
T PRK10749 322 IVDFFNRH 329 (330)
T ss_pred HHHHHhhc
Confidence 99999764
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=223.88 Aligned_cols=245 Identities=27% Similarity=0.388 Sum_probs=165.5
Q ss_pred EEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC
Q 015550 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (405)
Q Consensus 27 i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~ 104 (405)
++|...|+ ++|+|||+||++.+...|.++++.|.. +|+|+++|+||||.|+.+.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~- 57 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-----------------------DFRVLRYDKRGHGLSDAPE- 57 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-----------------------ccEEEEecCCCCCCCCCCC-
Confidence 67877886 467899999999999999999999876 9999999999999997554
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhh
Q 015550 105 KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (405)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (405)
..++++++++|+.++++.++.++++++||||||++++.+|.++|++|+++|++++...... ...+........
T Consensus 58 -~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~------~~~~~~~~~~~~ 130 (251)
T TIGR02427 58 -GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGT------PESWNARIAAVR 130 (251)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCc------hhhHHHHHhhhh
Confidence 3679999999999999999989999999999999999999999999999999987532111 000000000000
Q ss_pred ccChhhhhccCcccccCHhHHHhhhCCC--chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
....... .......++... .......+.+...+..... ......+......+....+.++++
T Consensus 131 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (251)
T TIGR02427 131 AEGLAAL---------ADAVLERWFTPGFREAHPARLDLYRNMLVRQPP-------DGYAGCCAAIRDADFRDRLGAIAV 194 (251)
T ss_pred hccHHHH---------HHHHHHHHcccccccCChHHHHHHHHHHHhcCH-------HHHHHHHHHHhcccHHHHhhhcCC
Confidence 0000000 000000000000 0000001111111111000 000000000111223345678899
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
|+++++|++|.++|.+..+.+.+.+ ++.+++++++ ||++++++|+++.+.|.+|++
T Consensus 195 Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 195 PTLCIAGDQDGSTPPELVREIADLV-PGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CeEEEEeccCCcCChHHHHHHHHhC-CCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999999999999999999998876 8889999997 999999999999999999973
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=224.30 Aligned_cols=257 Identities=16% Similarity=0.182 Sum_probs=166.0
Q ss_pred ccccCCEEEEEEEccCC---CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 19 ALNDNGIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~~---~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+++.||.+|+|+.+-++ ++.|+++||+++++..|..+++.|.+ +||+|+++|+||
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~----------------------~g~~via~D~~G 62 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISS----------------------LGILVFSHDHIG 62 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHh----------------------CCCEEEEccCCC
Confidence 46679999999887653 34566679999999999999999987 499999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
||.|+.... ...++.++++|+.+.++.+ ...+++++||||||++|+.+|.++|++|+++|++++.... ...+.
T Consensus 63 ~G~S~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~-~~~~~- 139 (276)
T PHA02857 63 HGRSNGEKM-MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA-EAVPR- 139 (276)
T ss_pred CCCCCCccC-CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc-ccccH-
Confidence 999975332 2346667778887777654 3458999999999999999999999999999999986421 11000
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh-hHHhhhcccC
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ-IHACWMHKMT 250 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 250 (405)
............ .+. ..........+ .... ... ..+.. .. .......... ..... ...
T Consensus 140 -~~~~~~~~~~~~--~~~-----~~~~~~~~~~~----~~~~--~~~-~~~~~---~~-~~~~~~~~~~~~~~~~--~~~ 198 (276)
T PHA02857 140 -LNLLAAKLMGIF--YPN-----KIVGKLCPESV----SRDM--DEV-YKYQY---DP-LVNHEKIKAGFASQVL--KAT 198 (276)
T ss_pred -HHHHHHHHHHHh--CCC-----CccCCCCHhhc----cCCH--HHH-HHHhc---CC-CccCCCccHHHHHHHH--HHH
Confidence 000000000000 000 00000000000 0000 000 00000 00 0000000000 00000 011
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCH---HHHHHHHHHHHHhh
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKAS 321 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p---~~v~~~i~~fl~~~ 321 (405)
.+..+.+.++++|+|+|+|++|.++|++.++++.+.+.++++++++++ ||.++.|++ +++.+.+.+||+..
T Consensus 199 ~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 199 NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 223456778999999999999999999999999998756789999998 999999865 57899999999875
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=222.17 Aligned_cols=240 Identities=17% Similarity=0.146 Sum_probs=154.2
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
|+++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+... .+++++
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~d~~G~G~s~~~~---~~~~~~ 54 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-----------------------HFTLHLVDLPGHGRSRGFG---PLSLAD 54 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-----------------------CeEEEEecCCcCccCCCCC---CcCHHH
Confidence 45667899999999999999999999987 8999999999999986543 467888
Q ss_pred HHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC--Cc-cchhHHHHHHHHHhhccChh
Q 015550 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--CP-KLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 113 ~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 189 (405)
+++++.+.+ .++++++||||||.+++.+|.++|++|+++|++++.+..... .+ .............+...
T Consensus 55 ~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 127 (245)
T TIGR01738 55 AAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDD--- 127 (245)
T ss_pred HHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhh---
Confidence 888776554 279999999999999999999999999999999876422110 11 01111111110000000
Q ss_pred hhhccCcccccCHhHHH-hhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 190 KRAAVDLDTHYSQEYLE-EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
.... ...+.. ........... ...+...+....... ...+...+......+....+.++++|+++++
T Consensus 128 ~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 195 (245)
T TIGR01738 128 YQRT-------IERFLALQTLGTPTARQD-ARALKQTLLARPTPN----VQVLQAGLEILATVDLRQPLQNISVPFLRLY 195 (245)
T ss_pred HHHH-------HHHHHHHHHhcCCccchH-HHHHHHHhhccCCCC----HHHHHHHHHHhhcccHHHHHhcCCCCEEEEe
Confidence 0000 000000 00000000000 011111111000000 0011111111111233456778999999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
|++|.++|++..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+
T Consensus 196 g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 196 GYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred ecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999998876 8999999997 99999999999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=231.76 Aligned_cols=273 Identities=20% Similarity=0.208 Sum_probs=165.0
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCC-----------chhhhH---hhhcCCCCCCCCchhhhccccCCCC
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHD-----------AWGPQL---KGLAGTDKPNDDDETILQDSVESGD 81 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~-----------~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~l 81 (405)
..++|.+|+|.++|+ ++++|||+||+++++. .|+.++ ..|..
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-------------------- 70 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-------------------- 70 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC--------------------
Confidence 345899999999995 3568999999999763 366665 23332
Q ss_pred CCCCeEEEEecCCC--CCCCCCC----CC------CCCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHHHhC
Q 015550 82 GGAGIEVCAFDNRG--MGRSSVP----VK------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 82 ~~~g~~Vi~~D~~G--~G~S~~~----~~------~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~ 148 (405)
++|+|+++|+|| ||.|... .. ...++++++++|+.++++++++++ ++++||||||++++.+|.++
T Consensus 71 --~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 71 --DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred --CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 399999999999 5655431 11 125789999999999999999998 99999999999999999999
Q ss_pred CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccC------------hh-hh---hccCcccccCHhHHHhhhCCC
Q 015550 149 PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT------------PE-KR---AAVDLDTHYSQEYLEEYVGSS 212 (405)
Q Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~---~~~~~~~~~~~~~~~~~~~~~ 212 (405)
|++|+++|++++...... ............+.... +. .. ...........+.+...+...
T Consensus 149 p~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 224 (351)
T TIGR01392 149 PERVRAIVVLATSARHSA----WCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRA 224 (351)
T ss_pred hHhhheEEEEccCCcCCH----HHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcC
Confidence 999999999998642110 00000000001110000 00 00 000000000111111111110
Q ss_pred c-hh---------HHHHHHHHhhhhhcccc--CcccchhhhHHhhhcccC---hhhhhhhhhcCCcEEEEeecCCccCCH
Q 015550 213 T-RR---------AILYQEYVKGISATGMQ--SNYGFDGQIHACWMHKMT---QKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (405)
Q Consensus 213 ~-~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvlvi~G~~D~~~~~ 277 (405)
. .. ....+.+.......... ....+.......-..... .+..+.++++++|+|+|+|++|.++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~ 304 (351)
T TIGR01392 225 PQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPP 304 (351)
T ss_pred cccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCH
Confidence 0 00 00001111000000000 000000000111111110 233567888999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEE-----EcCC-CccccccCHHHHHHHHHHHHH
Q 015550 278 CYARRLAEKLYPVARMI-----DLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 278 ~~~~~l~~~l~~~~~l~-----~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+.++.+++.+ ++++++ ++++ ||++++++|+++++.|.+||+
T Consensus 305 ~~~~~~a~~i-~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 305 AESRELAKAL-PAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHH-hhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9999999987 777655 4566 999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-28 Score=220.36 Aligned_cols=257 Identities=12% Similarity=0.094 Sum_probs=166.5
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
||.+++|.+.+..+|+|||+||++++...|.+++..|.+ +||+|+++|+||||.|...
T Consensus 5 ~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~dl~g~G~s~~~ 62 (273)
T PLN02211 5 NGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMEN----------------------SGYKVTCIDLKSAGIDQSD 62 (273)
T ss_pred cccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHh----------------------CCCEEEEecccCCCCCCCC
Confidence 788899988656667899999999999999999999976 3999999999999998543
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
.. ..++++++++++.+++++++ .++++++||||||+++..++.++|++|+++|++++...... + .....+.....
T Consensus 63 ~~-~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g-~--~~~~~~~~~~~ 138 (273)
T PLN02211 63 AD-SVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLG-F--QTDEDMKDGVP 138 (273)
T ss_pred cc-cCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCC-C--CHHHHHhcccc
Confidence 32 24799999999999999985 58999999999999999999999999999999987532100 0 00000000000
Q ss_pred HhhccChh----hhh-c--cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 182 FFRAKTPE----KRA-A--VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 182 ~~~~~~~~----~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
.+...... ... . .........++...++.... .................. .+ ...+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~ 203 (273)
T PLN02211 139 DLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMS-PQEDSTLAAMLLRPGPIL---AL-----------RSARFE 203 (273)
T ss_pred chhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCC-CHHHHHHHHHhcCCcCcc---cc-----------cccccc
Confidence 00000000 000 0 00000011122221111111 000000000000000000 00 000111
Q ss_pred hhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 255 QTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+....+ ++|+++|.|++|.++|++.++.+++.+ +..+++.+++||.+++++|+++++.|.++....
T Consensus 204 ~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~-~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 204 EETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW-PPSQVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccccccCccceEEEEeCCCCCCCHHHHHHHHHhC-CccEEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 112233 689999999999999999999999987 777999998899999999999999999987654
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-28 Score=229.87 Aligned_cols=277 Identities=18% Similarity=0.177 Sum_probs=166.8
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCc-------------hhhhHh---hhcCCCCCCCCchhhhccccCC
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA-------------WGPQLK---GLAGTDKPNDDDETILQDSVES 79 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~-------------~~~~~~---~L~~~~~~~~~~~~~~~~~~~~ 79 (405)
..++|.+++|..+|+ ++|+|||+||+++++.. |..++. .|..
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~------------------ 89 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT------------------ 89 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc------------------
Confidence 556889999999995 25789999999999975 444442 2211
Q ss_pred CCCCCCeEEEEecCCCC-CCCCCCCC------------CCCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHH
Q 015550 80 GDGGAGIEVCAFDNRGM-GRSSVPVK------------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLA 145 (405)
Q Consensus 80 ~l~~~g~~Vi~~D~~G~-G~S~~~~~------------~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a 145 (405)
++|+||++|++|+ |.|+.+.. ...++++++++++.++++++++++ ++++||||||++++.+|
T Consensus 90 ----~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a 165 (379)
T PRK00175 90 ----DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWA 165 (379)
T ss_pred ----cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHH
Confidence 3999999999983 54533210 015899999999999999999999 59999999999999999
Q ss_pred HhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc-------------Chhhhh-ccC---cccccCHhHHHhh
Q 015550 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK-------------TPEKRA-AVD---LDTHYSQEYLEEY 208 (405)
Q Consensus 146 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~-~~~---~~~~~~~~~~~~~ 208 (405)
.++|++|+++|++++...... . ...........+... .+.... ... .........+...
T Consensus 166 ~~~p~~v~~lvl~~~~~~~~~---~-~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~ 241 (379)
T PRK00175 166 IDYPDRVRSALVIASSARLSA---Q-NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEK 241 (379)
T ss_pred HhChHhhhEEEEECCCcccCH---H-HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhh
Confidence 999999999999998642110 0 000000000110000 000000 000 0000000001111
Q ss_pred hCCCchhH---------HHHHHHHhhhhhc--cccCcccchhhhHHhhhcccC----hhhhhhhhhcCCcEEEEeecCCc
Q 015550 209 VGSSTRRA---------ILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKMT----QKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 209 ~~~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
+....... ...+.+....... .......+............. .+..+.+.+|++|+|+|+|++|.
T Consensus 242 f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~ 321 (379)
T PRK00175 242 FGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDW 321 (379)
T ss_pred cCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCcc
Confidence 10000000 0000110000000 000000000000110001100 12456788999999999999999
Q ss_pred cCCHHHHHHHHHHhCCCe----EEEEcC-C-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 274 IAQICYARRLAEKLYPVA----RMIDLP-G-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~~~~----~l~~~~-g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
++|++.++.+++.+ +++ ++++++ + ||++++|+|+++++.|.+||++...
T Consensus 322 ~~p~~~~~~la~~i-~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 322 LFPPARSREIVDAL-LAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred ccCHHHHHHHHHHH-HhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 99999999999988 655 777775 6 9999999999999999999998653
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-27 Score=222.35 Aligned_cols=265 Identities=15% Similarity=0.168 Sum_probs=166.1
Q ss_pred cccccCCEEEEEEEccC-----CCCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 18 AALNDNGIKIFYRTYGR-----GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-----~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
.+...+|.+|+|+.+++ ..++|||+||++.+. ..|..++..|.. +||+|+++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~----------------------~Gy~V~~~ 93 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQ----------------------MGFACFAL 93 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHh----------------------CCCEEEEe
Confidence 44567999999988764 234699999998664 346667777876 49999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
|+||||.|+.... ...+++.+++|+.++++.+.. .+++|+||||||++++.++.++|++|+++|++++.....
T Consensus 94 D~rGhG~S~~~~~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 94 DLEGHGRSEGLRA-YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred cCCCCCCCCCccc-cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC
Confidence 9999999975432 245788999999999998753 369999999999999999999999999999999864322
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
..... ... ......+.....+..... . ....+...... . ....+.. ........... ........
T Consensus 173 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~----~-~~~~~~~-~~~~~~~~~~~-~~~~~~~~ 237 (330)
T PLN02298 173 DKIRP-PWP-IPQILTFVARFLPTLAIV-P-----TADLLEKSVKV----P-AKKIIAK-RNPMRYNGKPR-LGTVVELL 237 (330)
T ss_pred cccCC-chH-HHHHHHHHHHHCCCCccc-c-----CCCcccccccC----H-HHHHHHH-hCccccCCCcc-HHHHHHHH
Confidence 11110 000 001111111000000000 0 00000000000 0 0000000 00000000000 00000000
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHH----HHHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTE----EVNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~----~v~~~i~~fl~ 319 (405)
.........+..+++|+|+|+|++|.++|++.++++++.+. ++++++++++ ||.+++++|+ ++.+.|.+||.
T Consensus 238 --~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 238 --RVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred --HHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 01111235567889999999999999999999999998773 5789999998 9999998875 46778888998
Q ss_pred hhc
Q 015550 320 ASE 322 (405)
Q Consensus 320 ~~~ 322 (405)
+..
T Consensus 316 ~~~ 318 (330)
T PLN02298 316 ERC 318 (330)
T ss_pred Hhc
Confidence 874
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=214.85 Aligned_cols=226 Identities=30% Similarity=0.449 Sum_probs=153.4
Q ss_pred EEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015550 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (405)
Q Consensus 39 vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (405)
|||+||++++...|.++++.|.+ ||+|+++|+||+|.|+.+.....++++++++|+.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~ 57 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALAR-----------------------GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLA 57 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHT-----------------------TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEecCCccccccccccCCcchhhhhhhhh
Confidence 79999999999999999999975 9999999999999998766434689999999999
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCccc
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (405)
+++++++.++++++|||+||.+++.++.++|++|+++|++++......... .....................
T Consensus 58 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 129 (228)
T PF12697_consen 58 ELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLLAWRSRSLRR------ 129 (228)
T ss_dssp HHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC--HHHHHHHHHHHHHHHHHHHHH------
T ss_pred hcccccccccccccccccccccccccccccccccccceeeccccccccccc--ccccchhhhhhhhcccccccc------
Confidence 999999999999999999999999999999999999999998741100000 000000111111000000000
Q ss_pred ccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc-ccChhhhhhhhhcCCcEEEEeecCCccCCH
Q 015550 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMTQKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (405)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~ 277 (405)
.....+........ ...+... ....+..++.. ....+....++.+++|+++++|++|.+++.
T Consensus 130 -~~~~~~~~~~~~~~-----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~ 192 (228)
T PF12697_consen 130 -LASRFFYRWFDGDE-----PEDLIRS-----------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPP 192 (228)
T ss_dssp -HHHHHHHHHHTHHH-----HHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHH
T ss_pred -cccccccccccccc-----ccccccc-----------cccccccccccccccccccccccccCCCeEEeecCCCCCCCH
Confidence 00000111110000 0000000 00000000100 112233466778899999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 278 CYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 278 ~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
+..+.+.+.+ ++++++++++ ||++++++|++++++
T Consensus 193 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 193 ESAEELADKL-PNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHS-TTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCccHHHCHHHHhcC
Confidence 9999999876 8999999997 999999999999874
|
... |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-28 Score=216.70 Aligned_cols=234 Identities=15% Similarity=0.141 Sum_probs=148.3
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+.|+|||+||++++...|.++++.| + +|+|+++|+||||.|+.+. ..++++++
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~~~l-~-----------------------~~~vi~~D~~G~G~S~~~~---~~~~~~~~ 53 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVGEAL-P-----------------------DYPRLYIDLPGHGGSAAIS---VDGFADVS 53 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHHHHc-C-----------------------CCCEEEecCCCCCCCCCcc---ccCHHHHH
Confidence 3567999999999999999999987 4 7999999999999998654 34899999
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc-cceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
+|+.+++++++.++++++||||||.+|+.+|.++|++ |++++++++...... ... ..........+.....
T Consensus 54 ~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~------ 125 (242)
T PRK11126 54 RLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQN-AEE-RQARWQNDRQWAQRFR------ 125 (242)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCC-HHH-HHHHHhhhHHHHHHhc------
Confidence 9999999999999999999999999999999999765 999999886532110 000 0000000000000000
Q ss_pred cCcccccCHhHHHhhh-----CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 194 VDLDTHYSQEYLEEYV-----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 194 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
.......+..++ ..... .....+....... ........... .......+..+.+.+++||+++|+
T Consensus 126 ----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~P~lii~ 195 (242)
T PRK11126 126 ----QEPLEQVLADWYQQPVFASLNA--EQRQQLVAKRSNN---NGAAVAAMLEA-TSLAKQPDLRPALQALTFPFYYLC 195 (242)
T ss_pred ----cCcHHHHHHHHHhcchhhccCc--cHHHHHHHhcccC---CHHHHHHHHHh-cCcccCCcHHHHhhccCCCeEEEE
Confidence 000001111110 00000 0001111100000 00000000000 000111233456788999999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
|++|..+. .++++ .+++++++++ ||+++.|+|+++++.|.+|++.
T Consensus 196 G~~D~~~~-----~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 196 GERDSKFQ-----ALAQQ--LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred eCCcchHH-----HHHHH--hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 99998542 33443 3789999998 9999999999999999999964
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-27 Score=215.54 Aligned_cols=270 Identities=17% Similarity=0.229 Sum_probs=162.9
Q ss_pred ccccCCEEEEEEEccC-C-CCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 19 ALNDNGIKIFYRTYGR-G-PTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-~-~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
++++++.++.|...+. + +++|||+||++++... |..+...+.. .||+|+++|+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~----------------------~g~~vi~~d~~G 63 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKE----------------------EGREVIMYDQLG 63 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHh----------------------cCCEEEEEcCCC
Confidence 4677888889988774 3 5679999998666544 5555555554 389999999999
Q ss_pred CCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 96 MGRSSVPVKKT-EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~G~S~~~~~~~-~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
||.|..+.... .++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.... +....
T Consensus 64 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~----~~~~~- 138 (288)
T TIGR01250 64 CGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA----PEYVK- 138 (288)
T ss_pred CCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc----hHHHH-
Confidence 99998654322 3789999999999999999999999999999999999999999999999999875311 10000
Q ss_pred HHHHHHHHhhccChhhhhccCccccc-CH---hHHHhhh----CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHY-SQ---EYLEEYV----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
........+................+ .. ....... ..........................+... ... ..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 216 (288)
T TIGR01250 139 ELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNE-FTI-TG 216 (288)
T ss_pred HHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcc-ccc-cc
Confidence 00000000000000000000000000 00 0000000 000000000000000000000000000000 000 00
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.....+..+.+.++++|+++++|++|.+ +++..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+|++
T Consensus 217 ~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 217 NLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 0011123356678899999999999985 567888888876 8889999997 999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=211.02 Aligned_cols=273 Identities=22% Similarity=0.219 Sum_probs=169.9
Q ss_pred CCEEEEEEEcc---CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 23 NGIKIFYRTYG---RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 23 ~g~~i~y~~~G---~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
++..++..+.. .+.+++|||||+|++...|..-++.|++ .++|+++|++|+|+|
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-----------------------~~~vyaiDllG~G~S 130 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-----------------------IRNVYAIDLLGFGRS 130 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-----------------------cCceEEecccCCCCC
Confidence 44444444433 3456799999999999999999999998 899999999999999
Q ss_pred CCCCCCCCC--CHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC-cc----ch
Q 015550 100 SVPVKKTEY--TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC-PK----LD 172 (405)
Q Consensus 100 ~~~~~~~~~--~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~----~~ 172 (405)
++|.-..+. ..+.+++-++++....++.+.+|+|||+||++|..||.+||++|+.|||++|.+....+. .. ..
T Consensus 131 SRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~ 210 (365)
T KOG4409|consen 131 SRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPP 210 (365)
T ss_pred CCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCC
Confidence 988753332 345788999999999999999999999999999999999999999999999987655331 11 11
Q ss_pred hHHHHHHHHHhhccChhh--hhccCcccccCHhHHHhhhCCC--chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 173 LQTLSIAIRFFRAKTPEK--RAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
...............+.. +..-.+.......+....+... ...+....+|.-............+...+..+- -
T Consensus 211 ~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g--~ 288 (365)
T KOG4409|consen 211 PEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGG--W 288 (365)
T ss_pred hHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccc--h
Confidence 111111111122222211 1111111111111111111111 111111222332222222111111111111100 0
Q ss_pred cChhhhhhhhhcC--CcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 249 MTQKDIQTIRSAG--FLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 249 ~~~~~~~~l~~i~--~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.....+..+..++ |||++|+|++|.+- .....++.+.+ ...++.+++++ ||+++.++|+.+++.|.++++..
T Consensus 289 Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 289 ARRPMIQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hhhhHHHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 1122234455555 99999999999864 44555555543 35589999998 99999999999999999998753
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=208.25 Aligned_cols=241 Identities=21% Similarity=0.251 Sum_probs=155.4
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
|+|||+||++++...|.++++.|.. ||+|+++|+||+|.|+.+.....+++++++++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 58 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGP-----------------------HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQD 58 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcc-----------------------cCeEEEEcCCCCCCCCCCCccChhhHHHHHHH
Confidence 6799999999999999999999986 99999999999999987655457789999999
Q ss_pred -HHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh-HHHHHHHHHhhccChhhhhcc
Q 015550 117 -VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL-QTLSIAIRFFRAKTPEKRAAV 194 (405)
Q Consensus 117 -l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 194 (405)
+..+++.++.++++++||||||.+++.+|.++|++|++++++++............. .........+.....
T Consensus 59 ~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 132 (251)
T TIGR03695 59 ILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGL------ 132 (251)
T ss_pred HHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCc------
Confidence 788889998899999999999999999999999999999999876321110000000 000000000000000
Q ss_pred CcccccCHhHHHhhh-----CC-CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 195 DLDTHYSQEYLEEYV-----GS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 195 ~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
..+...+. .. ..........+....... ........+.. .......+..+.+..+++|+++|+
T Consensus 133 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~l~i~ 201 (251)
T TIGR03695 133 -------EAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN---NPEGLAKMLRA-TGLGKQPSLWPKLQALTIPVLYLC 201 (251)
T ss_pred -------cHHHHHHhcCceeeecccCChHHhHHHHHhcccc---cchHHHHHHHH-hhhhcccchHHHhhCCCCceEEEe
Confidence 00000000 00 000000001111100000 00000000000 000011223345678899999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
|++|..++ +..+.+.+.+ ++++++++++ ||++++++|+++++.|.+|++
T Consensus 202 g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 202 GEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred eCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 99998764 5667777765 8899999998 999999999999999999983
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-26 Score=218.00 Aligned_cols=255 Identities=28% Similarity=0.371 Sum_probs=167.8
Q ss_pred cccccCCEEEEEEEccCC-CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGRG-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~-~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
..+..++.+++|...|++ .++|||+||++++...|..+...|.. +|+|+++|+|||
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~g~ 168 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-----------------------GRPVIALDLPGH 168 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-----------------------CCEEEEEcCCCC
Confidence 346778889999998863 56899999999999999999999987 799999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|..... ..+++++++++.++++.++.++++++||||||.+++.+|..+|+++.++|++++........ ....
T Consensus 169 G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~----~~~~ 242 (371)
T PRK14875 169 GASSKAVG--AGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN----GDYI 242 (371)
T ss_pred CCCCCCCC--CCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc----hhHH
Confidence 99965443 67899999999999999999999999999999999999999999999999998764221110 0000
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhh-cccChhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWM-HKMTQKDI 254 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 254 (405)
. .+......... ...+...+... .........+.......... ..+......... .....+..
T Consensus 243 ~---~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 307 (371)
T PRK14875 243 D---GFVAAESRREL----------KPVLELLFADPALVTRQMVEDLLKYKRLDGVD--DALRALADALFAGGRQRVDLR 307 (371)
T ss_pred H---HhhcccchhHH----------HHHHHHHhcChhhCCHHHHHHHHHHhccccHH--HHHHHHHHHhccCcccchhHH
Confidence 0 00000000000 00000000000 00000000000000000000 000000000000 00112333
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+.+++||+|+++|++|.++|++..+. +.++.++.++++ ||++++++|+++++.|.+|+++
T Consensus 308 ~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 308 DRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 4567889999999999999999876654 335688999997 9999999999999999999975
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-26 Score=211.15 Aligned_cols=268 Identities=19% Similarity=0.211 Sum_probs=157.4
Q ss_pred cccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
...+|.+|+|.+.|+ +.++|||+||++++...+ .+...+.. .+|+|+++|+||||.
T Consensus 10 ~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~----------------------~~~~vi~~D~~G~G~ 66 (306)
T TIGR01249 10 NVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDP----------------------ETYRIVLFDQRGCGK 66 (306)
T ss_pred EcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCc----------------------cCCEEEEECCCCCCC
Confidence 444689999999986 345799999988776543 33344433 389999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH--
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL-- 176 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-- 176 (405)
|+.+.....++.+++++|+..++++++.++++++||||||.+++.++.++|++|+++|++++................
T Consensus 67 S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 146 (306)
T TIGR01249 67 STPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASM 146 (306)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhh
Confidence 986543335678899999999999999999999999999999999999999999999999876321100000000000
Q ss_pred ---HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchh-HHHHHHHHh----hhhhcc---ccCccc--chhhhHH
Q 015550 177 ---SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRR-AILYQEYVK----GISATG---MQSNYG--FDGQIHA 243 (405)
Q Consensus 177 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~---~~~~~~--~~~~~~~ 243 (405)
.....+........+ ...+...+...+....... ....+.+.. .+.... ...... ....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (306)
T TIGR01249 147 IYPDAWQRFMDSIPENER-----NEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFAR 221 (306)
T ss_pred hCHHHHHHHhhhCChhhh-----hccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHH
Confidence 000000000000000 0011112222222221110 011111110 000000 000000 0000000
Q ss_pred ---hh--hccc---Chhhhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 244 ---CW--MHKM---TQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 244 ---~~--~~~~---~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
.+ .... .......+.++ ++|+|+|+|++|.++|.+.++.+++.+ ++++++++++ ||.++.+ +..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~---~~~~~ 297 (306)
T TIGR01249 222 LENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF-PEAELKVTNNAGHSAFDP---NNLAA 297 (306)
T ss_pred HHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCCCh---HHHHH
Confidence 00 0000 11123455666 699999999999999999999999987 8899999997 9998643 34455
Q ss_pred HHHHHH
Q 015550 314 LIDLIK 319 (405)
Q Consensus 314 i~~fl~ 319 (405)
|.+|+.
T Consensus 298 i~~~~~ 303 (306)
T TIGR01249 298 LVHALE 303 (306)
T ss_pred HHHHHH
Confidence 555554
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=215.09 Aligned_cols=270 Identities=19% Similarity=0.216 Sum_probs=160.3
Q ss_pred EEEEEEcc-C-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 26 KIFYRTYG-R-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 26 ~i~y~~~G-~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
++++.... + ++|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+.+.
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~rG~G~S~~~~ 149 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-----------------------RFRVIAIDQLGWGGSSRPD 149 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-----------------------CCEEEEECCCCCCCCCCCC
Confidence 55544432 2 447899999999999999999999987 8999999999999998654
Q ss_pred CCCCCCH----HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH-----
Q 015550 104 KKTEYTT----KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ----- 174 (405)
Q Consensus 104 ~~~~~~~----~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----- 174 (405)
.. ..+. +.+++++.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.+............
T Consensus 150 ~~-~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 228 (402)
T PLN02894 150 FT-CKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRA 228 (402)
T ss_pred cc-cccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcch
Confidence 21 1121 2356778888888999999999999999999999999999999999999875332211100000
Q ss_pred HH-HHHHHHh--hccChhhhhcc--CcccccCHhHHHhhhCCC-------chhHHHHHHHHhhhhhccccCcccchhhhH
Q 015550 175 TL-SIAIRFF--RAKTPEKRAAV--DLDTHYSQEYLEEYVGSS-------TRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (405)
Q Consensus 175 ~~-~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
.+ ......+ ....+...... .........+....+... .........+...... ..... ...+.
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~-~~~~~ 304 (402)
T PLN02894 229 TWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLA---AKASG-ELCLK 304 (402)
T ss_pred hHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhc---CCCch-HHHHH
Confidence 00 0000000 00011100000 000000001111110000 0000111111110000 00000 00000
Q ss_pred Hhh--hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 243 ACW--MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 243 ~~~--~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
... ......+....+..+++|+++|+|++|.+.+ .....+.+...+.++++++++ ||+++.|+|++|++.|.+|++
T Consensus 305 ~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 305 YIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred HhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 000 0001223345677889999999999998876 555556665545689999998 999999999999999999999
Q ss_pred hhcCC
Q 015550 320 ASEKK 324 (405)
Q Consensus 320 ~~~~~ 324 (405)
.....
T Consensus 384 ~~~~~ 388 (402)
T PLN02894 384 KYLSP 388 (402)
T ss_pred HhccC
Confidence 88765
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=209.59 Aligned_cols=282 Identities=15% Similarity=0.134 Sum_probs=173.3
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCch---------hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAW---------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~---------~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 87 (405)
.+..++|.|+++|. +.+.||++|++.+++..- .-+...|.....++|+ ..|.
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt---------------~~yf 101 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDT---------------NKYF 101 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCC---------------CceE
Confidence 45778999999996 346899999998865321 1123445455556666 4899
Q ss_pred EEEecCCCCCCCCCC-----------C--------CCCCCCHHHHHHHHHHHHHHhCCccEE-EEEEChhHHHHHHHHHh
Q 015550 88 VCAFDNRGMGRSSVP-----------V--------KKTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAM 147 (405)
Q Consensus 88 Vi~~D~~G~G~S~~~-----------~--------~~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~ 147 (405)
||++|..|-|.|+.| + ....++++++++++..+++++++++++ ++||||||++|+.+|.+
T Consensus 102 vi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 102 VISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred EEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHH
Confidence 999999998764322 1 112479999999999999999999987 99999999999999999
Q ss_pred CCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc------------Chh----hhhccCcccccCHhHHHhhhCC
Q 015550 148 VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK------------TPE----KRAAVDLDTHYSQEYLEEYVGS 211 (405)
Q Consensus 148 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~~~~~~~~ 211 (405)
+|++|+++|++++..... +.............+... .+. .............+++...+..
T Consensus 182 ~P~~v~~lv~ia~~~~~~---~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r 258 (389)
T PRK06765 182 YPHMVERMIGVIGNPQND---AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPR 258 (389)
T ss_pred ChHhhheEEEEecCCCCC---hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCc
Confidence 999999999998763211 000000111111111110 000 0000000111122222222111
Q ss_pred Cc----------hhHHHHHHHHhhhhhc--cccCcccchhhhHHhhhcc---cChhhhhhhhhcCCcEEEEeecCCccCC
Q 015550 212 ST----------RRAILYQEYVKGISAT--GMQSNYGFDGQIHACWMHK---MTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (405)
Q Consensus 212 ~~----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvlvi~G~~D~~~~ 276 (405)
.. ......+.|....... .......+......+-.+. ...+..+.+..+++|+|+|+|++|.++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p 338 (389)
T PRK06765 259 NASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQP 338 (389)
T ss_pred CccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCC
Confidence 10 0000112222221110 0000111111111111111 1113456788899999999999999999
Q ss_pred HHHHHHHHHHhC---CCeEEEEcC-C-CccccccCHHHHHHHHHHHHHh
Q 015550 277 ICYARRLAEKLY---PVARMIDLP-G-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 277 ~~~~~~l~~~l~---~~~~l~~~~-g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
++..+++++.+. +++++++++ + ||+.++++|+++++.|.+||++
T Consensus 339 ~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 339 PRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999999998873 378999997 4 9999999999999999999965
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=246.24 Aligned_cols=259 Identities=17% Similarity=0.263 Sum_probs=166.9
Q ss_pred EEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC
Q 015550 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (405)
Q Consensus 27 i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~ 104 (405)
++|...|+ ++++|||+||++++...|.++++.|.+ +|+|+++|+||||.|..+..
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-----------------------~~rVi~~Dl~G~G~S~~~~~ 1416 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-----------------------SARCISIDLPGHGGSKIQNH 1416 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEcCCCCCCCCCccc
Confidence 55666675 346899999999999999999999987 89999999999999975431
Q ss_pred ------CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHH
Q 015550 105 ------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (405)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (405)
...++++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+.... .....
T Consensus 1417 ~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~-------~~~~~ 1489 (1655)
T PLN02980 1417 AKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKD-------EVARK 1489 (1655)
T ss_pred cccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCc-------hHHHH
Confidence 23578999999999999999999999999999999999999999999999999987532110 00000
Q ss_pred HHHHhhccChhhhhccCcccccCHhHHHhhhCCC-----chhHHHHHHHHh-hhhhccccCcccchhhhHHhhhcccChh
Q 015550 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-----TRRAILYQEYVK-GISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
...... ........ ......+...++... ..... ...... .+.... ...+...+.. +......+
T Consensus 1490 ~~~~~~---~~~~~~l~--~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~-~~~~~~~d 1559 (1655)
T PLN02980 1490 IRSAKD---DSRARMLI--DHGLEIFLENWYSGELWKSLRNHPH-FNKIVASRLLHKD---VPSLAKLLSD-LSIGRQPS 1559 (1655)
T ss_pred HHhhhh---hHHHHHHH--hhhHHHHHHHhccHHHhhhhccCHH-HHHHHHHHHhcCC---HHHHHHHHHH-hhhcccch
Confidence 000000 00000000 000000111111000 00000 001110 000000 0000000100 00011123
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC------------eEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV------------ARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~------------~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+.+.++++|+|+|+|++|.+++ +.++++.+.+ ++ ++++++++ ||++++|+|+++++.|.+||+
T Consensus 1560 l~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i-~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~ 1637 (1655)
T PLN02980 1560 LWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREI-GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLT 1637 (1655)
T ss_pred HHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHc-cccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHH
Confidence 346688899999999999999875 6677777766 33 58999998 999999999999999999999
Q ss_pred hhcCCCCC
Q 015550 320 ASEKKISP 327 (405)
Q Consensus 320 ~~~~~~~~ 327 (405)
+......+
T Consensus 1638 ~~~~~~~~ 1645 (1655)
T PLN02980 1638 RLHNSSTP 1645 (1655)
T ss_pred hccccCCC
Confidence 87755444
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=232.41 Aligned_cols=273 Identities=16% Similarity=0.213 Sum_probs=165.8
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.++..+|.+|+|..+|+ +.|+|||+||++++...|.++++.|.+ +|+|+++|+|||
T Consensus 6 ~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Vi~~D~~G~ 62 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLAD-----------------------RFRVVAYDVRGA 62 (582)
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhc-----------------------ceEEEEecCCCC
Confidence 34677999999999996 457899999999999999999999965 999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHHHh--CCcccceEEEeccCCCCCC------C
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQ------C 167 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~------~ 167 (405)
|.|+.+.....++++++++|+.+++++++..+ ++|+||||||.+++.++.+ .++++..++.++++..... .
T Consensus 63 G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 142 (582)
T PRK05855 63 GRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSG 142 (582)
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhc
Confidence 99987654457899999999999999998765 9999999999999888876 2445555555543210000 0
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhcccc---Cc---ccchhhh
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ---SN---YGFDGQI 241 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~ 241 (405)
.................. .................... ...... ...+........ .. .......
T Consensus 143 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (582)
T PRK05855 143 LRRPTPRRLARALGQLLR---SWYIYLFHLPVLPELLWRLG-----LGRAWP-RLLRRVEGTPVDPIPTQTTLSDGAHGV 213 (582)
T ss_pred ccccchhhhhHHHHHHhh---hHHHHHHhCCCCcHHHhccc-----hhhHHH-HhhhhccCCCcchhhhhhhhccccchH
Confidence 000000000000000000 00000000000000000000 000000 000000000000 00 0000000
Q ss_pred HHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 242 HACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..+............+..+++|+++|+|++|.++|+...+.+.+.+ ++.+++++++||+++.|+|+++++.|.+|+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 214 KLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWV-PRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAV 292 (582)
T ss_pred HHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccC-CcceEEEccCCCcchhhChhHHHHHHHHHHHhc
Confidence 0000000000111123457899999999999999999999988765 788888888899999999999999999999886
Q ss_pred cC
Q 015550 322 EK 323 (405)
Q Consensus 322 ~~ 323 (405)
..
T Consensus 293 ~~ 294 (582)
T PRK05855 293 EG 294 (582)
T ss_pred cC
Confidence 53
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-25 Score=209.23 Aligned_cols=259 Identities=19% Similarity=0.211 Sum_probs=164.2
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
..++..++|..+.+ .+++||++||++++...|..+++.|.+ +||+|+++|+|||
T Consensus 117 ~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~----------------------~Gy~V~~~D~rGh 174 (395)
T PLN02652 117 GARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTS----------------------CGFGVYAMDWIGH 174 (395)
T ss_pred CCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHH----------------------CCCEEEEeCCCCC
Confidence 34567788887755 335799999999998889999999987 4999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ccEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccCCCCCCCCc
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~ 169 (405)
|.|+.... ...+.+.+++|+.++++.+.. .+++++||||||.+++.++. +|+ +|+++|+.+|........+
T Consensus 175 G~S~~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~ 252 (395)
T PLN02652 175 GGSDGLHG-YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP 252 (395)
T ss_pred CCCCCCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH
Confidence 99986543 345788899999999998753 37999999999999998764 564 8999999987632111000
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
.............+... .... .. ...............+...+. .. +.............
T Consensus 253 -----~~~~~~~l~~~~~p~~~----~~~~-~~----~~~~~s~~~~~~~~~~~dp~~----~~--g~i~~~~~~~~~~~ 312 (395)
T PLN02652 253 -----IVGAVAPIFSLVAPRFQ----FKGA-NK----RGIPVSRDPAALLAKYSDPLV----YT--GPIRVRTGHEILRI 312 (395)
T ss_pred -----HHHHHHHHHHHhCCCCc----ccCc-cc----ccCCcCCCHHHHHHHhcCCCc----cc--CCchHHHHHHHHHH
Confidence 00001011100000000 0000 00 000000001111111110000 00 00000000000001
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhhcC
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASEK 323 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~~~ 323 (405)
.....+.+.++++|+|++||++|.++|++.++++++++. ++++++++++ +|.++.| +++++.+.|.+||.....
T Consensus 313 ~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 313 SSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 112234567889999999999999999999999999863 3578999999 8999887 799999999999987653
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-25 Score=201.84 Aligned_cols=273 Identities=20% Similarity=0.234 Sum_probs=176.1
Q ss_pred CCCCcccccCCEEEEEEEccCC-C--CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 14 AAPDAALNDNGIKIFYRTYGRG-P--TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 14 ~~~~~~~~~~g~~i~y~~~G~~-~--p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.....+...+|..++|..+-.. + .+||++||++.+...|..++..|.. +||.|++
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~----------------------~G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAA----------------------RGFDVYA 66 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHh----------------------CCCEEEE
Confidence 3456668889999999988753 2 4799999999999999999999998 5999999
Q ss_pred ecCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhC----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 91 FDNRGMGRSSV-PVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 91 ~D~~G~G~S~~-~~~~~~~~~~~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
+|+||||.|.. ... ..-++.++.+|+.++++... ..+++++||||||.|++.++.+++.+|+++||.+|.....
T Consensus 67 ~D~RGhG~S~r~~rg-~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 67 LDLRGHGRSPRGQRG-HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred ecCCCCCCCCCCCcC-CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 99999999973 332 34458999999999999885 3589999999999999999999999999999999874222
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
. ....... ................... .. ..........+.....+.|.+.-. ..........+..+.
T Consensus 146 ~---~~~~~~~---~~~~~~~~~~~~p~~~~~~--~~-~~~~~~~~~sr~~~~~~~~~~dP~---~~~~~~~~~w~~~~~ 213 (298)
T COG2267 146 G---AILRLIL---ARLALKLLGRIRPKLPVDS--NL-LEGVLTDDLSRDPAEVAAYEADPL---IGVGGPVSRWVDLAL 213 (298)
T ss_pred h---hHHHHHH---HHHhcccccccccccccCc--cc-ccCcCcchhhcCHHHHHHHhcCCc---cccCCccHHHHHHHH
Confidence 1 0001011 0110000000000000000 00 000001111112222222221110 000000111111111
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCC-HHHHHHHHHHh-CCCeEEEEcCC-Ccccccc-CH--HHHHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ-ICYARRLAEKL-YPVARMIDLPG-GHLVSHE-RT--EEVNQALIDLIK 319 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~-~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e-~p--~~v~~~i~~fl~ 319 (405)
... ..........+++|+|+++|++|.+++ .+...++.+++ .+++++++++| .|.++.| .. +++.+.+.+|+.
T Consensus 214 ~a~-~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~ 292 (298)
T COG2267 214 LAG-RVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLA 292 (298)
T ss_pred Hhh-cccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHH
Confidence 100 012233356678999999999999999 68888887776 46689999999 8999887 45 789999999998
Q ss_pred hhc
Q 015550 320 ASE 322 (405)
Q Consensus 320 ~~~ 322 (405)
+..
T Consensus 293 ~~~ 295 (298)
T COG2267 293 EAL 295 (298)
T ss_pred hhc
Confidence 765
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=189.98 Aligned_cols=266 Identities=20% Similarity=0.200 Sum_probs=178.1
Q ss_pred CCcccccCCEEEEEEEccC-C--CC--eEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 16 PDAALNDNGIKIFYRTYGR-G--PT--KVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~-~--~p--~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
...+.+.+|.++++..+-+ . +| .|+++||++... ..|..++..|+. .||.|+
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~----------------------~g~~v~ 86 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAK----------------------SGFAVY 86 (313)
T ss_pred eeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHh----------------------CCCeEE
Confidence 3445677899999988865 1 23 699999999876 678889999988 499999
Q ss_pred EecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
++|++|||.|++... ..-+++..++|+.+..+... ..+..++||||||.|++.++.+.|+..+++|+++|.+.
T Consensus 87 a~D~~GhG~SdGl~~-yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 87 AIDYEGHGRSDGLHA-YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred EeeccCCCcCCCCcc-cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 999999999996654 45688999999999998752 24799999999999999999999999999999999875
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
..+..+.. .........+....|..+. ... .......+.+...+...... .....+..+.-..
T Consensus 166 i~~~~kp~--p~v~~~l~~l~~liP~wk~-vp~-----~d~~~~~~kdp~~r~~~~~n---------pl~y~g~pRl~T~ 228 (313)
T KOG1455|consen 166 ISEDTKPH--PPVISILTLLSKLIPTWKI-VPT-----KDIIDVAFKDPEKRKILRSD---------PLCYTGKPRLKTA 228 (313)
T ss_pred cCCccCCC--cHHHHHHHHHHHhCCceee-cCC-----ccccccccCCHHHHHHhhcC---------CceecCCccHHHH
Confidence 44433211 1111122222222222221 100 00111111111111111100 0000011111111
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-Cccccc----cCHHHHHHHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSH----ERTEEVNQALIDL 317 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~----e~p~~v~~~i~~f 317 (405)
+-......+....+.++++|++|+||+.|.++.++.++.+++.. ..+.++..+|| -|.++. |+.+.|...|.+|
T Consensus 229 ~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~W 308 (313)
T KOG1455|consen 229 YELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISW 308 (313)
T ss_pred HHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHH
Confidence 11112234556778899999999999999999999999999987 46789999999 898875 3556778888889
Q ss_pred HHhh
Q 015550 318 IKAS 321 (405)
Q Consensus 318 l~~~ 321 (405)
|++.
T Consensus 309 l~~r 312 (313)
T KOG1455|consen 309 LDER 312 (313)
T ss_pred HHhc
Confidence 8763
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=182.28 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=176.6
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+..+.++|.+|.|..+|.|+.-||+++|.-++. ..|.+++..|.+.+ .+.++++|.||
T Consensus 23 e~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l---------------------~~TivawDPpG 81 (277)
T KOG2984|consen 23 ESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPL---------------------QVTIVAWDPPG 81 (277)
T ss_pred hheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCC---------------------ceEEEEECCCC
Confidence 445788999999999999998899999987665 57999999888742 59999999999
Q ss_pred CCCCCCCCCCCCC-CHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 96 MGRSSVPVKKTEY-TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~G~S~~~~~~~~~-~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
+|.|..|..+... -+..-+++...+++.|..+++.++|||-||..|+..|+++++.|.++|+.+...--. .......+
T Consensus 82 YG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn-~~~~ma~k 160 (277)
T KOG2984|consen 82 YGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN-HLGAMAFK 160 (277)
T ss_pred CCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceec-chhHHHHh
Confidence 9999877653222 234456677788899999999999999999999999999999999999998752100 00000111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
.+.....+.. +.......+|..+++... ...+++.+..-..... ..-..
T Consensus 161 giRdv~kWs~------r~R~P~e~~Yg~e~f~~~----------wa~wvD~v~qf~~~~d---------------G~fCr 209 (277)
T KOG2984|consen 161 GIRDVNKWSA------RGRQPYEDHYGPETFRTQ----------WAAWVDVVDQFHSFCD---------------GRFCR 209 (277)
T ss_pred chHHHhhhhh------hhcchHHHhcCHHHHHHH----------HHHHHHHHHHHhhcCC---------------CchHh
Confidence 1111111111 111112233333333321 2233332221111100 01112
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..+.+++||+||+||+.|++++..++..+.... +.+++.+.+. +|.+++.-+++++..+.+||+..
T Consensus 210 ~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 210 LVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hhcccccCCeeEeeCCcCCCCCCCCccchhhhc-ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 346789999999999999999998888888865 8899999985 99999999999999999999864
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=175.49 Aligned_cols=221 Identities=19% Similarity=0.212 Sum_probs=153.3
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
..||||||+.|+....+.+.+.|.+ +||.|.++.+||||.....- -..+.++|.+|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e----------------------~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~ 71 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNE----------------------NGYTVYAPRYPGHGTLPEDF--LKTTPRDWWED 71 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHH----------------------CCceEecCCCCCCCCCHHHH--hcCCHHHHHHH
Confidence 4699999999999999999999998 59999999999999885322 25678888888
Q ss_pred HHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc
Q 015550 117 VIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (405)
Q Consensus 117 l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
+.+..++| +.+.|.++|-||||.+|+.+|..+| ++++|.++++..... ....+.....+...
T Consensus 72 v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~-----~~~iie~~l~y~~~-------- 136 (243)
T COG1647 72 VEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKS-----WRIIIEGLLEYFRN-------- 136 (243)
T ss_pred HHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccccc-----chhhhHHHHHHHHH--------
Confidence 87776665 6789999999999999999999998 999999998742211 11111111111100
Q ss_pred cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCc
Q 015550 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
+-.-............+.+..+.. .+... ...+..+....+..|..|++++.|++|.
T Consensus 137 --------------~kk~e~k~~e~~~~e~~~~~~~~~-------~~~~~--~~~~i~~~~~~~~~I~~pt~vvq~~~D~ 193 (243)
T COG1647 137 --------------AKKYEGKDQEQIDKEMKSYKDTPM-------TTTAQ--LKKLIKDARRSLDKIYSPTLVVQGRQDE 193 (243)
T ss_pred --------------hhhccCCCHHHHHHHHHHhhcchH-------HHHHH--HHHHHHHHHhhhhhcccchhheecccCC
Confidence 000000000011111111111000 00000 0112234445677888999999999999
Q ss_pred cCCHHHHHHHHHHhC-CCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHH
Q 015550 274 IAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIK 319 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~ 319 (405)
++|.+.+..+.+... ...++.++++ ||.+..+ ..+.+.+.+..||+
T Consensus 194 mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 194 MVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred CCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 999999999999873 4678999998 9988876 78899999999996
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=184.13 Aligned_cols=254 Identities=20% Similarity=0.235 Sum_probs=165.4
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
..|+++++||+-++...|+.+.+.|+..+ +..|+++|.|.||.|+... .++.+.++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l---------------------~~~v~~vd~RnHG~Sp~~~---~h~~~~ma 106 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKL---------------------GRDVYAVDVRNHGSSPKIT---VHNYEAMA 106 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccc---------------------cCceEEEecccCCCCcccc---ccCHHHHH
Confidence 45789999999999999999999999853 7799999999999997655 56799999
Q ss_pred HHHHHHHHHhC----CccEEEEEEChhH-HHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChh
Q 015550 115 KDVIALMDHLG----WKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 115 ~dl~~~l~~l~----~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (405)
+|+..+++..+ ..+++++|||||| .+++..+...|+.+..+|+++.++.............+..+...-.....
T Consensus 107 ~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~- 185 (315)
T KOG2382|consen 107 EDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGV- 185 (315)
T ss_pred HHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccc-
Confidence 99999999884 5689999999999 78888888999999999999987643332222222222111111111000
Q ss_pred hhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh-hHHhhhcc---cChhhhhhhhhcCCcEE
Q 015550 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ-IHACWMHK---MTQKDIQTIRSAGFLVS 265 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~i~~Pvl 265 (405)
... .....+.+.+...+......+...+.+ ........+.++-. +...+... ......+. .....|||
T Consensus 186 ~~~-----rke~~~~l~~~~~d~~~~~fi~~nl~~--~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvl 257 (315)
T KOG2382|consen 186 SRG-----RKEALKSLIEVGFDNLVRQFILTNLKK--SPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVL 257 (315)
T ss_pred ccc-----HHHHHHHHHHHhcchHHHHHHHHhcCc--CCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-ccccccee
Confidence 000 000001111111111111111111111 11111111111111 11111110 01111222 55678999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 266 vi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+++|.++..++.+.-.++.+.+ |++++++++. ||+++.|+|+++.+.|.+|+.+.+
T Consensus 258 fi~g~~S~fv~~~~~~~~~~~f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 258 FIKGLQSKFVPDEHYPRMEKIF-PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred EEecCCCCCcChhHHHHHHHhc-cchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 9999999999999888888865 9999999995 999999999999999999997754
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-23 Score=191.74 Aligned_cols=258 Identities=17% Similarity=0.122 Sum_probs=155.5
Q ss_pred ccCCEEEEEEEccCC--CCeEEEEecCCCCCCc----------------------h----hhhHhhhcCCCCCCCCchhh
Q 015550 21 NDNGIKIFYRTYGRG--PTKVILITGLAGTHDA----------------------W----GPQLKGLAGTDKPNDDDETI 72 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~--~p~vvllHG~~~~~~~----------------------~----~~~~~~L~~~~~~~~~~~~~ 72 (405)
+.+|.+|+++.+.+. +.+|+++||++.+... | ..+++.|.+
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~----------- 72 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK----------- 72 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH-----------
Confidence 458899999888653 3479999999998851 1 356788877
Q ss_pred hccccCCCCCCCCeEEEEecCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC------------------------C
Q 015550 73 LQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHLG------------------------W 126 (405)
Q Consensus 73 ~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~l~------------------------~ 126 (405)
+||.|+++|+||||.|...... ...+++++++|+.++++.+. .
T Consensus 73 -----------~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (332)
T TIGR01607 73 -----------NGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENR 141 (332)
T ss_pred -----------CCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCC
Confidence 5999999999999999854321 12478999999999998642 2
Q ss_pred ccEEEEEEChhHHHHHHHHHhCCc--------ccceEEEeccCCCCCC-CCc--cchhHHHHHHHHHhhccChhhhhccC
Q 015550 127 KQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVTGGGFQ-CCP--KLDLQTLSIAIRFFRAKTPEKRAAVD 195 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
.+++++||||||.+++.++..+++ .++++|++++...... ..+ .............+....+.......
T Consensus 142 ~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 221 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKK 221 (332)
T ss_pred CceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCc
Confidence 479999999999999999876643 5899998887631100 000 00000011111111111111000000
Q ss_pred cccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc--CCcEEEEeecCCc
Q 015550 196 LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGRHDV 273 (405)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlvi~G~~D~ 273 (405)
......+...+.+..+.. ...+ ... ......... ........+..+ ++|+|+|+|++|.
T Consensus 222 ~~~~~~~~~~~~~~~Dp~-------------~~~~-~~s---~~~~~~l~~--~~~~~~~~~~~i~~~~P~Lii~G~~D~ 282 (332)
T TIGR01607 222 IRYEKSPYVNDIIKFDKF-------------RYDG-GIT---FNLASELIK--ATDTLDCDIDYIPKDIPILFIHSKGDC 282 (332)
T ss_pred cccccChhhhhHHhcCcc-------------ccCC-ccc---HHHHHHHHH--HHHHHHhhHhhCCCCCCEEEEEeCCCC
Confidence 000000000000000000 0000 000 000000000 001111233444 6999999999999
Q ss_pred cCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccC-HHHHHHHHHHHHH
Q 015550 274 IAQICYARRLAEKLY-PVARMIDLPG-GHLVSHER-TEEVNQALIDLIK 319 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~-p~~v~~~i~~fl~ 319 (405)
+++++.++.+++++. ++++++++++ +|.++.|. ++++.+.|.+||+
T Consensus 283 vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 283 VCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 999999999988763 5789999998 99999884 7899999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=201.40 Aligned_cols=262 Identities=18% Similarity=0.241 Sum_probs=153.3
Q ss_pred ccCCEEEEEEEc-------cCCCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTY-------GRGPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~-------G~~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..||..+.+.-. .+++|+||++||+++++.. | ..++..+.+ +||+|+++
T Consensus 78 ~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~----------------------~g~~vv~~ 135 (388)
T PLN02511 78 TPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARS----------------------KGWRVVVF 135 (388)
T ss_pred CCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH----------------------CCCEEEEE
Confidence 346666664221 1346789999999887654 4 456555544 39999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ccEEEEEEChhHHHHHHHHHhCCcc--cceEEEeccCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGGGF 165 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~ 165 (405)
|+||||.|..... .+....+++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++....
T Consensus 136 d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~ 213 (388)
T PLN02511 136 NSRGCADSPVTTP--QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLV 213 (388)
T ss_pred ecCCCCCCCCCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHH
Confidence 9999999975432 22335677888888888765 5899999999999999999999987 88888887653110
Q ss_pred CCCccchhHHHHH-----HHHHhhccChhhhhc-cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchh
Q 015550 166 QCCPKLDLQTLSI-----AIRFFRAKTPEKRAA-VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (405)
Q Consensus 166 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
........ .+.. ....+.......... ......+.... ...... ..++.+.+... ..++..
T Consensus 214 ~~~~~~~~-~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~fd~~~t~~----~~gf~~ 280 (388)
T PLN02511 214 IADEDFHK-GFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPL---VANAKT-----VRDFDDGLTRV----SFGFKS 280 (388)
T ss_pred HHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHH---HHhCCC-----HHHHHHhhhhh----cCCCCC
Confidence 00000000 0000 000000000000000 00000000000 000000 11111111110 111111
Q ss_pred hhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHH------HH
Q 015550 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEE------VN 311 (405)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~------v~ 311 (405)
. ..++. ..+....+.++++|+|+|+|++|+++|++.. ...++.. ++++++++++ ||+.++|+|+. ++
T Consensus 281 ~-~~yy~---~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~ 355 (388)
T PLN02511 281 V-DAYYS---NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGPEAPFGAPWTD 355 (388)
T ss_pred H-HHHHH---HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCCCCCCCCccHH
Confidence 1 11111 0122356788999999999999999998765 3455544 9999999997 99999999876 58
Q ss_pred HHHHHHHHhhcCC
Q 015550 312 QALIDLIKASEKK 324 (405)
Q Consensus 312 ~~i~~fl~~~~~~ 324 (405)
+.+.+||+.....
T Consensus 356 ~~i~~Fl~~~~~~ 368 (388)
T PLN02511 356 PVVMEFLEALEEG 368 (388)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887654
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-21 Score=184.34 Aligned_cols=226 Identities=19% Similarity=0.182 Sum_probs=142.3
Q ss_pred CCEEEEEEEc---cC-CCCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 23 NGIKIFYRTY---GR-GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 23 ~g~~i~y~~~---G~-~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
+|..|....+ +. ..|+||++||+.+.. +.|..++..|.+ +||.|+++|+||+|
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~----------------------~Gy~vl~~D~pG~G 234 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAP----------------------RGIAMLTIDMPSVG 234 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHh----------------------CCCEEEEECCCCCC
Confidence 4545554333 22 235555555655543 578888888887 49999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
.|..... ..+......++.+++... +.++++++||||||.+|+.+|..+|++|+++|++++........+..
T Consensus 235 ~s~~~~~--~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~--- 309 (414)
T PRK05077 235 FSSKWKL--TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKR--- 309 (414)
T ss_pred CCCCCCc--cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhh---
Confidence 9965322 234444555666666554 45789999999999999999999999999999998764211100000
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (405)
.. . .+... ...+...+.... ....+... ...+ ....
T Consensus 310 -~~-------~-~p~~~----------~~~la~~lg~~~~~~~~l~~~-l~~~-----------------------sl~~ 346 (414)
T PRK05077 310 -QQ-------Q-VPEMY----------LDVLASRLGMHDASDEALRVE-LNRY-----------------------SLKV 346 (414)
T ss_pred -hh-------h-chHHH----------HHHHHHHhCCCCCChHHHHHH-hhhc-----------------------cchh
Confidence 00 0 00000 000000000000 00000000 0000 0000
Q ss_pred hhhh-hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 254 IQTI-RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 254 ~~~l-~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
...+ +++++|+|+|+|++|.++|++.++.+.+.. ++.+++++++. ++++.++++.+.|.+||+..
T Consensus 347 ~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~-~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 347 QGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS-ADGKLLEIPFK--PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred hhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC-CCCeEEEccCC--CccCCHHHHHHHHHHHHHHH
Confidence 0111 468899999999999999999999888865 89999999986 45679999999999999864
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=179.53 Aligned_cols=219 Identities=24% Similarity=0.288 Sum_probs=132.8
Q ss_pred eEEEEecCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 86 IEVCAFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 86 ~~Vi~~D~~G~G~S~~--~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
|+|+++|+||+|.|+. ......++.+++++++..++++++.++++++||||||++++.+|.++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 14446889999999999999999999999999999999999999999999999999998520
Q ss_pred CCCCCcc-chhHHHHH--HHHHhhccChh-hhhccC-cccccC--HhHHHhhhCCCchhHHHHHHHHhhhhhccccCccc
Q 015550 164 GFQCCPK-LDLQTLSI--AIRFFRAKTPE-KRAAVD-LDTHYS--QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (405)
Q Consensus 164 ~~~~~~~-~~~~~~~~--~~~~~~~~~~~-~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (405)
.+. ........ ........... ...... ...... ....................+.... . ...
T Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~ 150 (230)
T PF00561_consen 81 ----LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA-E-----TDA 150 (230)
T ss_dssp ----HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC-H-----HHH
T ss_pred ----chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHH-H-----HHH
Confidence 000 00000000 00000000000 000000 000000 0000000000000000001111000 0 000
Q ss_pred chhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHH
Q 015550 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
...............+....+..+++|+++++|++|.++|++....+.+.+ |+.+++++++ ||+.+.+.++++++.|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 151 FDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred HhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000000000111223334566789999999999999999999999988876 9999999998 99999999999999875
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=173.22 Aligned_cols=245 Identities=18% Similarity=0.148 Sum_probs=144.1
Q ss_pred cccCCEEEEEEEc---cCCCCeEEEEecCCCC----CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 20 LNDNGIKIFYRTY---GRGPTKVILITGLAGT----HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 20 ~~~~g~~i~y~~~---G~~~p~vvllHG~~~~----~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
+..+|..+.-..+ +..++.||++||+... ...|..+++.|.+ +||+|+++|
T Consensus 7 ~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~----------------------~G~~v~~~D 64 (274)
T TIGR03100 7 FSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAE----------------------AGFPVLRFD 64 (274)
T ss_pred EEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHH----------------------CCCEEEEeC
Confidence 3445555542222 2234568888886642 3345667788876 499999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
+||||.|... ..+.+++.+|+.++++.+ +.++++++||||||.+++.+|.. +.+|+++|++++.......
T Consensus 65 l~G~G~S~~~----~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~ 139 (274)
T TIGR03100 65 YRGMGDSEGE----NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAA 139 (274)
T ss_pred CCCCCCCCCC----CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCccc
Confidence 9999998743 246777888888888877 55789999999999999999865 4689999999976321110
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhc-cccCcccchhhhHHhhh
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT-GMQSNYGFDGQIHACWM 246 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 246 (405)
. ............. .. ..++.........-......+...+... .........
T Consensus 140 ~---~~~~~~~~~~~~~-~~--------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 193 (274)
T TIGR03100 140 Q---AASRIRHYYLGQL-LS--------------ADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHG-------- 193 (274)
T ss_pred c---hHHHHHHHHHHHH-hC--------------hHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccc--------
Confidence 0 0000100000000 00 0111111111111111111111110000 000000000
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHH------HHHHHHh-CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA------RRLAEKL-YPVARMIDLPG-GHLVSHE-RTEEVNQALIDL 317 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~------~~l~~~l-~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~f 317 (405)
....+....+..+++|+++++|..|...+ ... .++.+.+ .++++++.+++ +|++..+ .++++.+.|.+|
T Consensus 194 -~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~w 271 (274)
T TIGR03100 194 -GLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEW 271 (274)
T ss_pred -hHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHH
Confidence 01223345566778999999999999864 222 4455544 37899999997 9998666 558999999999
Q ss_pred HH
Q 015550 318 IK 319 (405)
Q Consensus 318 l~ 319 (405)
|+
T Consensus 272 L~ 273 (274)
T TIGR03100 272 LR 273 (274)
T ss_pred Hh
Confidence 95
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=175.75 Aligned_cols=244 Identities=15% Similarity=0.122 Sum_probs=138.9
Q ss_pred CCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC--CCCCHH
Q 015550 36 PTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTTK 111 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~--~~~~~~ 111 (405)
+|+||++||++++... +..++..|.+ +||+|+++|+||||.+...... .....+
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~ 115 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQK----------------------RGWLGVVMHFRGCSGEPNRLHRIYHSGETE 115 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHH----------------------CCCEEEEEeCCCCCCCccCCcceECCCchH
Confidence 5789999999887654 4567788877 5999999999999987533211 111233
Q ss_pred HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc--cceEEEeccCCCCCCCCccchhHHHHHH-HHHhhccCh
Q 015550 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTP 188 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 188 (405)
+....+..+.++++..+++++||||||.+++.++..+++. +.++|+++++.....+...... ..... .+.+.....
T Consensus 116 D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~-~~~~~~~~~l~~~l~ 194 (324)
T PRK10985 116 DARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ-GFSRVYQRYLLNLLK 194 (324)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh-hHHHHHHHHHHHHHH
Confidence 3333333344445667899999999999988888887654 8999999876321100000000 00000 000000000
Q ss_pred hhhhccCcccccCHhHHHhhhCCCc-hhHH-----HHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSST-RRAI-----LYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
.. ....+..+..... .... ...++.+.+. ....++......+.. .+..+.++++++
T Consensus 195 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~----~~~~g~~~~~~~y~~----~~~~~~l~~i~~ 256 (324)
T PRK10985 195 AN----------AARKLAAYPGTLPINLAQLKSVRRLREFDDLIT----ARIHGFADAIDYYRQ----CSALPLLNQIRK 256 (324)
T ss_pred HH----------HHHHHHhccccccCCHHHHhcCCcHHHHhhhhe----eccCCCCCHHHHHHH----CChHHHHhCCCC
Confidence 00 0000000000000 0000 0111111111 111222222222211 123456788999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCH-----HHHHHHHHHHHHhh
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT-----EEVNQALIDLIKAS 321 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p-----~~v~~~i~~fl~~~ 321 (405)
|+++|+|++|.+++++....+.+. .++.+++++++ ||+.+++.. .-..+.+.+|++..
T Consensus 257 P~lii~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 257 PTLIIHAKDDPFMTHEVIPKPESL-PPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CEEEEecCCCCCCChhhChHHHHh-CCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999998888877654 48899999987 999998742 35667788888654
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-20 Score=174.81 Aligned_cols=271 Identities=13% Similarity=0.110 Sum_probs=149.2
Q ss_pred cccCCEEEEEEEcc---CCCCeEEEEecCCCCCCch-----hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 20 LNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 20 ~~~~g~~i~y~~~G---~~~p~vvllHG~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
...+...++..... ..+++||++||+..+...+ ..+++.|.+ +||+|+++
T Consensus 43 ~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~----------------------~G~~V~~~ 100 (350)
T TIGR01836 43 YREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE----------------------RGQDVYLI 100 (350)
T ss_pred EEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHH----------------------CCCeEEEE
Confidence 44455566554322 1234699999986655443 578888887 59999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHH-HH----HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKD-VI----ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~d-l~----~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
|++|+|.|.. .+++++++.+ +. .+.+..+.++++++||||||++++.++..+|++|+++|+++++.....
T Consensus 101 D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 101 DWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFET 175 (350)
T ss_pred eCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCC
Confidence 9999998753 3456666533 44 444455778999999999999999999999999999999998643211
Q ss_pred CCccchhH-----HHHHHHHHhhccChhhhhc----cCcccccCHhHHHhhhCCCchhHHHHHHHHh---hhhhccccCc
Q 015550 167 CCPKLDLQ-----TLSIAIRFFRAKTPEKRAA----VDLDTHYSQEYLEEYVGSSTRRAILYQEYVK---GISATGMQSN 234 (405)
Q Consensus 167 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 234 (405)
. +..... ................... ......+...+..... ... .......+.. ..........
T Consensus 176 ~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~w~~d~~~~~~ 252 (350)
T TIGR01836 176 P-GNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVD-ILE-DERKVENFLRMEKWIFDSPDQAG 252 (350)
T ss_pred C-CchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHH-hcC-ChHHHHHHHHHHHHhcCCcCccH
Confidence 0 000000 0000000000000000000 0000000000110000 000 0001111110 0000000000
Q ss_pred ccchhhhHHhhhc-ccC------hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCCCccccccC
Q 015550 235 YGFDGQIHACWMH-KMT------QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPGGHLVSHER 306 (405)
Q Consensus 235 ~~~~~~~~~~~~~-~~~------~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~ggH~~~~e~ 306 (405)
..+...+...+.. ... ......+.++++|+++++|++|.++|++.++.+.+.+. ++.+++++++||+.++..
T Consensus 253 ~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 332 (350)
T TIGR01836 253 EAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVS 332 (350)
T ss_pred HHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEEC
Confidence 0000000000000 000 01122366789999999999999999999999999873 356788888999887764
Q ss_pred ---HHHHHHHHHHHHHh
Q 015550 307 ---TEEVNQALIDLIKA 320 (405)
Q Consensus 307 ---p~~v~~~i~~fl~~ 320 (405)
++++.+.|.+||.+
T Consensus 333 ~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 333 GKAQKEVPPAIGKWLQA 349 (350)
T ss_pred chhHhhhhHHHHHHHHh
Confidence 47899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-20 Score=166.60 Aligned_cols=217 Identities=18% Similarity=0.241 Sum_probs=136.8
Q ss_pred cCCEEEEEEEccCC------CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 22 DNGIKIFYRTYGRG------PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 22 ~~g~~i~y~~~G~~------~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+|..|.-+..-+. .++||++||++++...+..+++.|.+ +||.|+.||.||
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~----------------------~G~~vLrfD~rg 74 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSS----------------------NGFHVIRYDSLH 74 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHH----------------------CCCEEEEecCCC
Confidence 46788876555442 25799999999988778999999988 599999999998
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 96 M-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 96 ~-G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+ |.|++... ..++....+|+.++++.+ +.+++.|+||||||.+|+..|... .++.+|+.+|... +
T Consensus 75 ~~GeS~G~~~--~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~-------l 143 (307)
T PRK13604 75 HVGLSSGTID--EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN-------L 143 (307)
T ss_pred CCCCCCCccc--cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc-------H
Confidence 8 99976443 334444567876666655 456899999999999997777643 4999999988631 1
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc--
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM-- 249 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (405)
. ..+.. .+..... .++.....+.++ +.+ .... ...+... +.....
T Consensus 144 ~-d~l~~---~~~~~~~------~~p~~~lp~~~d-~~g-~~l~---~~~f~~~------------------~~~~~~~~ 190 (307)
T PRK13604 144 R-DTLER---ALGYDYL------SLPIDELPEDLD-FEG-HNLG---SEVFVTD------------------CFKHGWDT 190 (307)
T ss_pred H-HHHHH---hhhcccc------cCcccccccccc-ccc-cccc---HHHHHHH------------------HHhcCccc
Confidence 1 11111 0000000 000000000000 000 0000 0011110 000000
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-Cccccc
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSH 304 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~ 304 (405)
.....+.+..+++|+|+|||++|.++|++.++++.+.+. .+++++.++| +|.+..
T Consensus 191 ~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 191 LDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred cccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 012234566778999999999999999999999999873 5799999999 887743
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.4e-20 Score=164.82 Aligned_cols=213 Identities=17% Similarity=0.137 Sum_probs=128.9
Q ss_pred EEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 27 i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
++|...+. ..|+||++||++++...|..+++.|.+ +||.|+++|+||||.+....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~G~~~~~~ 72 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQ----------------------AGFRVIMPDAPMHGARFSGD 72 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHh----------------------CCCEEEEecCCcccccCCCc
Confidence 55555443 247899999999999889999999987 49999999999999864221
Q ss_pred CCCCCC-----HHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 104 KKTEYT-----TKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 104 ~~~~~~-----~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
.....+ .....+|+.++++.+ +.++++++||||||.+++.++.++|+....++++++.. ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~--------~~ 144 (249)
T PRK10566 73 EARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY--------FT 144 (249)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH--------HH
Confidence 101110 112234444444432 34689999999999999999999886444444444320 00
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
. ...... .+ .... ...... ....+..... ..+
T Consensus 145 --~---~~~~~~--~~-~~~~-----------------~~~~~~-~~~~~~~~~~----------------------~~~ 176 (249)
T PRK10566 145 --S---LARTLF--PP-LIPE-----------------TAAQQA-EFNNIVAPLA----------------------EWE 176 (249)
T ss_pred --H---HHHHhc--cc-cccc-----------------ccccHH-HHHHHHHHHh----------------------hcC
Confidence 0 000000 00 0000 000000 0011110000 001
Q ss_pred hhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCC-----CeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 253 DIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYP-----VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 253 ~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-----~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
....+.++ ++|+|++||++|.++|++.++++.+.+.. ++++..+++ ||... .+..+.+.+||++.
T Consensus 177 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 177 VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 11234454 68999999999999999999999988732 357778898 99864 35678888888753
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=164.24 Aligned_cols=280 Identities=21% Similarity=0.177 Sum_probs=178.6
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhh-------hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP-------QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~-------~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
.+++..|.|+++|. ....||++||+.+++..... +.+.+....+++|+ ..|.||
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt---------------~r~fvI 96 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDT---------------ERFFVI 96 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCc---------------cceEEE
Confidence 45778999999996 23579999999997765542 66777776777777 489999
Q ss_pred EecCCCCC-CCCCCCC-----------CCCCCHHHHHHHHHHHHHHhCCccEE-EEEEChhHHHHHHHHHhCCcccceEE
Q 015550 90 AFDNRGMG-RSSVPVK-----------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLA 156 (405)
Q Consensus 90 ~~D~~G~G-~S~~~~~-----------~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lv 156 (405)
++|..|.+ .|+.|.. ...+++.|+++.-..++++||++++. +||.|||||.|++++..|||+|.++|
T Consensus 97 c~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i 176 (368)
T COG2021 97 CTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAI 176 (368)
T ss_pred EecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhh
Confidence 99999976 4443321 12468889999889999999999987 89999999999999999999999999
Q ss_pred EeccCCCCCCCCccchhHHHHHHHHHhhccChhhh-----------------hccCcccccCHhHHHhhhCCCc------
Q 015550 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR-----------------AAVDLDTHYSQEYLEEYVGSST------ 213 (405)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~------ 213 (405)
.++++..... ....+....+..-...|... .........+.+.+++.+....
T Consensus 177 ~ia~~~r~s~-----~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~ 251 (368)
T COG2021 177 PIATAARLSA-----QNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLR 251 (368)
T ss_pred eecccccCCH-----HHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccC
Confidence 9998632110 00011111111111111110 0000111222333333333211
Q ss_pred --hhHHHHHHHHhhhhhcccc--CcccchhhhHHhhhccc---ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHH
Q 015550 214 --RRAILYQEYVKGISATGMQ--SNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEK 286 (405)
Q Consensus 214 --~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~ 286 (405)
......+.|.+.....-.. ....+.....+.-.+.. ..+..+.+..+++|++++.-+.|...|++..+++++.
T Consensus 252 ~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~ 331 (368)
T COG2021 252 GGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEA 331 (368)
T ss_pred CCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHh
Confidence 1122333333332211000 00011111111111111 1334566888999999999999999999999999999
Q ss_pred hCCCeEEEEcCC--CccccccCHHHHHHHHHHHHHh
Q 015550 287 LYPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 287 l~~~~~l~~~~g--gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+.+...+++++. ||..++...+.+...|..||+.
T Consensus 332 L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 332 LPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 843333888874 9999999999999999999974
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=172.66 Aligned_cols=278 Identities=17% Similarity=0.160 Sum_probs=160.2
Q ss_pred cccCCEEEEEEEcc--------CCCCeEEEEecCCCCCCchhh------hHhhhcCCCCCCCCchhhhccccCCCCCCCC
Q 015550 20 LNDNGIKIFYRTYG--------RGPTKVILITGLAGTHDAWGP------QLKGLAGTDKPNDDDETILQDSVESGDGGAG 85 (405)
Q Consensus 20 ~~~~g~~i~y~~~G--------~~~p~vvllHG~~~~~~~~~~------~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g 85 (405)
.+-||+.|...... ..+|+|||+||++++++.|.. +...|++ +|
T Consensus 50 ~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~----------------------~G 107 (395)
T PLN02872 50 QTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD----------------------HG 107 (395)
T ss_pred ECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh----------------------CC
Confidence 46688888876642 124679999999999988842 3334555 59
Q ss_pred eEEEEecCCCCCCCCC-------CCCCCCCCHHHHH-HHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCc---c
Q 015550 86 IEVCAFDNRGMGRSSV-------PVKKTEYTTKIMA-KDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPE---R 151 (405)
Q Consensus 86 ~~Vi~~D~~G~G~S~~-------~~~~~~~~~~~~~-~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~---~ 151 (405)
|+|+++|+||++.|.. +.....+++++++ .|+.++++++ ..++++++||||||.+++.++ .+|+ +
T Consensus 108 ydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~ 186 (395)
T PLN02872 108 FDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEM 186 (395)
T ss_pred CCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHH
Confidence 9999999999886632 1112357888898 7999999987 337999999999999998555 5776 6
Q ss_pred cceEEEeccCCCCCCCCccchhHH----HHHHHHHhhc--c--Ch-hhhhccC---cccccCHhHHHhhhCCC-------
Q 015550 152 VLSLALLNVTGGGFQCCPKLDLQT----LSIAIRFFRA--K--TP-EKRAAVD---LDTHYSQEYLEEYVGSS------- 212 (405)
Q Consensus 152 v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~--~~-~~~~~~~---~~~~~~~~~~~~~~~~~------- 212 (405)
|+.+++++|..........+.... .......+.. . .. ....... .........+..+.+..
T Consensus 187 v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~ 266 (395)
T PLN02872 187 VEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASR 266 (395)
T ss_pred HHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhh
Confidence 888899988743211111111000 0000000000 0 00 0000000 00000001111111100
Q ss_pred ----------chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc--CCcEEEEeecCCccCCHHHH
Q 015550 213 ----------TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGRHDVIAQICYA 280 (405)
Q Consensus 213 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlvi~G~~D~~~~~~~~ 280 (405)
.........|...+.+ +....+++....+.......... .-.+.++ ++|+++++|++|.+++++.+
T Consensus 267 ~~~~~~~~pagtS~k~~~H~~Q~~~s-~~f~~yDyg~~~n~~~Yg~~~pP-~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv 344 (395)
T PLN02872 267 IDYYLEYEPHPSSVKNLRHLFQMIRK-GTFAHYDYGIFKNLKLYGQVNPP-AFDLSLIPKSLPLWMGYGGTDGLADVTDV 344 (395)
T ss_pred hhHHHhcCCCcchHHHHHHHHHHHhc-CCcccCCCCchhhHHHhCCCCCC-CcCcccCCCCccEEEEEcCCCCCCCHHHH
Confidence 0000111122222222 22222333222222222222221 1224555 68999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCC-Ccc---ccccCHHHHHHHHHHHHHhhc
Q 015550 281 RRLAEKLYPVARMIDLPG-GHL---VSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 281 ~~l~~~l~~~~~l~~~~g-gH~---~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+++.+.+.+..+++.+++ ||. ...+.++++.+.|.+|+++..
T Consensus 345 ~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 345 EHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred HHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 999998844368888998 996 344789999999999998643
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=176.92 Aligned_cols=239 Identities=15% Similarity=0.088 Sum_probs=142.4
Q ss_pred CCCeEEEEecCCCCCCchh-----hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCC
Q 015550 35 GPTKVILITGLAGTHDAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~-----~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~ 109 (405)
.++|||++||+......|+ .+++.|.+ +||+|+++|++|+|.+.......+|.
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~----------------------qGf~V~~iDwrgpg~s~~~~~~ddY~ 244 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVE----------------------QGHTVFVISWRNPDASQADKTFDDYI 244 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHH----------------------CCcEEEEEECCCCCcccccCChhhhH
Confidence 3467999999988888775 68888887 59999999999999986554334565
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEEChhHHHHH----HHHHhC-CcccceEEEeccCCCCCCCCccc----hhHHHHHHH
Q 015550 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC----KLAAMV-PERVLSLALLNVTGGGFQCCPKL----DLQTLSIAI 180 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~ 180 (405)
.+.+.+++..+++.++.++++++||||||.++. .+++.+ |++|++++++++...... ...+ +...+....
T Consensus 245 ~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~-~G~l~~f~~~~~~~~~e 323 (532)
T TIGR01838 245 RDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSD-PGELGVFVDEEIVAGIE 323 (532)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCC-cchhhhhcCchhHHHHH
Confidence 566777788888888999999999999999852 345555 789999999998743211 1110 000110000
Q ss_pred HHhhc---cChhhhhc----cCcccccCHhHHHhhhCC---------------CchhHHHHHHHHhhhhhccccCcccch
Q 015550 181 RFFRA---KTPEKRAA----VDLDTHYSQEYLEEYVGS---------------STRRAILYQEYVKGISATGMQSNYGFD 238 (405)
Q Consensus 181 ~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (405)
..... ........ ..........++..+... .......+.+|++.+-..+....-
T Consensus 324 ~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G--- 400 (532)
T TIGR01838 324 RQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTG--- 400 (532)
T ss_pred HHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCC---
Confidence 10000 00000000 000000000011111111 011222222332222111110000
Q ss_pred hhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHH
Q 015550 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308 (405)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~ 308 (405)
.....+....+..+++|+++|+|++|.++|++.+..+.+.+ ++.+..++++ ||.+++++|.
T Consensus 401 --------~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i-~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 401 --------GLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL-GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred --------eeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC-CCCEEEEECCCCCchHhhCCC
Confidence 00011223567889999999999999999999999999877 6777778876 9999988764
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=155.71 Aligned_cols=185 Identities=14% Similarity=0.123 Sum_probs=123.6
Q ss_pred CeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 37 TKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
|+||++||++++...|.. +...+.+.. .+|+|+++|+||++ ++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~--------------------~~~~v~~~dl~g~~-------------~~~~ 48 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH--------------------PDIEMIVPQLPPYP-------------ADAA 48 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC--------------------CCCeEEeCCCCCCH-------------HHHH
Confidence 579999999999999984 334443310 27999999999984 3588
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhcc
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
+++.+++++++.++++++||||||.+++.+|.++|. ++|++++... ..... ..+..... ... .
T Consensus 49 ~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~--------~~~~~---~~~~~~~~-~~~--~ 111 (190)
T PRK11071 49 ELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR--------PFELL---TDYLGENE-NPY--T 111 (190)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC--------HHHHH---HHhcCCcc-ccc--C
Confidence 899999999999999999999999999999999983 4688887631 01111 11111100 000 0
Q ss_pred CcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCcc
Q 015550 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (405)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~ 274 (405)
......+..++. . ... . ....+. ..+|+++|||++|.+
T Consensus 112 ~~~~~~~~~~~~--------------d----~~~--------------------~---~~~~i~-~~~~v~iihg~~De~ 149 (190)
T PRK11071 112 GQQYVLESRHIY--------------D----LKV--------------------M---QIDPLE-SPDLIWLLQQTGDEV 149 (190)
T ss_pred CCcEEEcHHHHH--------------H----HHh--------------------c---CCccCC-ChhhEEEEEeCCCCc
Confidence 000000011111 0 000 0 011122 567899999999999
Q ss_pred CCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 275 ~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+|++.+.++.+. ++++.++| +|.+ ...+++.+.+.+|++
T Consensus 150 V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 150 LDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999999999984 35667788 7877 445889999999974
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=157.00 Aligned_cols=267 Identities=27% Similarity=0.377 Sum_probs=156.2
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
....+..+.|...+.+.|+++++||++++...|......+... . ..|+|+++|+||||.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~d~~g~g~s 64 (282)
T COG0596 5 LAADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPAL-------------------A-ARYRVIAPDLRGHGRS 64 (282)
T ss_pred ccCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhcc-------------------c-cceEEEEecccCCCCC
Confidence 3446778888888876668999999999999998844444431 0 0299999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc----chhHH
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK----LDLQT 175 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~ 175 (405)
. .. .++...+++++..++++++..+++++||||||.+++.++.++|++++++|++++.......... .....
T Consensus 65 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 140 (282)
T COG0596 65 D-PA---GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAP 140 (282)
T ss_pred C-cc---cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccc
Confidence 7 11 3455566999999999999989999999999999999999999999999999987431100000 00000
Q ss_pred HHHHHHHhhcc-ChhhhhccCcccccCHhHHHh--hhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 176 LSIAIRFFRAK-TPEKRAAVDLDTHYSQEYLEE--YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
........... ............ ........ ........................ .... ..........
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~ 212 (282)
T COG0596 141 LAALADLLLGLDAAAFAALLAALG-LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR---ADLA----AALLALLDRD 212 (282)
T ss_pred hhhhhhhhhccchhhhhhhhhccc-ccccccccchhccccccccccchhHhhhhhhhcc---cccc----hhhhcccccc
Confidence 00000000000 000000000000 00000000 000000000000000000000000 0000 0000000002
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC-eEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~-~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.......+++|+++++|++|.+.|......+.+.+ ++ .+++++++ ||+++.++|+++++.+.+|+.
T Consensus 213 ~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 213 LRAALARITVPTLIIHGEDDPVVPAELARRLAAAL-PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhC-CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 23445677899999999999777776666666655 64 88999998 999999999999999888543
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-19 Score=153.01 Aligned_cols=262 Identities=18% Similarity=0.187 Sum_probs=152.7
Q ss_pred cccCCEE--EEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIK--IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~--i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
++++|.. +..+..++ ..|.++++||++.+.-+|..+++.|... ...+|+++|+|
T Consensus 53 v~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~---------------------~~~r~~a~DlR 111 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSK---------------------IRCRCLALDLR 111 (343)
T ss_pred cccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhh---------------------cceeEEEeecc
Confidence 4455544 33333344 4578999999999999999999999874 26788999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccCCCCCCCCc
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~ 169 (405)
|||.+...+. .+.+.+.+++|+.++++.+ ...+++||||||||.||...|.. .|. +.+|+.++.. .
T Consensus 112 gHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV-------E 182 (343)
T KOG2564|consen 112 GHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV-------E 182 (343)
T ss_pred ccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe-------c
Confidence 9999976665 5799999999999999987 24589999999999999888765 465 8999999976 2
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh---hHHhhh
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ---IHACWM 246 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 246 (405)
......+.....++...+.......+...+..+.-..+.... .+ .......+.... + ..|.+... ...+|.
T Consensus 183 gtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~S--Ar-VsmP~~~~~~~e-G--h~yvwrtdL~kte~YW~ 256 (343)
T KOG2564|consen 183 GTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNRDS--AR-VSMPSQLKQCEE-G--HCYVWRTDLEKTEQYWK 256 (343)
T ss_pred hHHHHHHHHHHHHHhcCCccccchhhHHHHHhcccccccccc--ce-EecchheeeccC-C--CcEEEEeeccccchhHH
Confidence 233344444555554433322211110000000000000000 00 000000000000 0 00000000 011111
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
..+. ......-...+|-++|-...|..-..-.. -+.....++.+++. ||+++.+.|..++..+..|+.++.
T Consensus 257 gWF~-gLS~~Fl~~p~~klLilAg~d~LDkdLti----GQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 257 GWFK-GLSDKFLGLPVPKLLILAGVDRLDKDLTI----GQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred HHHh-hhhhHhhCCCccceeEEecccccCcceee----eeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 1100 00111223446666666666654221111 11235678999986 999999999999999999998876
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=143.77 Aligned_cols=144 Identities=31% Similarity=0.410 Sum_probs=113.4
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
+||++||++++...|..+++.|.+ +||.|+.+|+||+|.+.... ..+++.+++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~ 53 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAE----------------------QGYAVVAFDYPGHGDSDGAD-----AVERVLADI 53 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHH----------------------TTEEEEEESCTTSTTSHHSH-----HHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEecCCCCccchhH-----HHHHHHHHH
Confidence 589999999999999999999988 49999999999999883211 222333332
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcc
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD 197 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (405)
. .+..+.++++++|||+||.+++.++.+. .+|+++|++++.. .
T Consensus 54 ~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~-------~--------------------------- 96 (145)
T PF12695_consen 54 R--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP-------D--------------------------- 96 (145)
T ss_dssp H--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESS-------G---------------------------
T ss_pred H--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCcc-------c---------------------------
Confidence 2 1123668999999999999999999998 7999999999620 0
Q ss_pred cccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCH
Q 015550 198 THYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (405)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~ 277 (405)
.+.+...++|+++++|++|.++++
T Consensus 97 --------------------------------------------------------~~~~~~~~~pv~~i~g~~D~~~~~ 120 (145)
T PF12695_consen 97 --------------------------------------------------------SEDLAKIRIPVLFIHGENDPLVPP 120 (145)
T ss_dssp --------------------------------------------------------CHHHTTTTSEEEEEEETT-SSSHH
T ss_pred --------------------------------------------------------hhhhhccCCcEEEEEECCCCcCCH
Confidence 122345567999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcCC-Ccc
Q 015550 278 CYARRLAEKLYPVARMIDLPG-GHL 301 (405)
Q Consensus 278 ~~~~~l~~~l~~~~~l~~~~g-gH~ 301 (405)
+..+++.+++..+.++++++| +|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 121 EQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 999999999866799999998 885
|
... |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-18 Score=148.54 Aligned_cols=190 Identities=23% Similarity=0.282 Sum_probs=134.6
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.+++|++||...+......+...|...+ +++|+++|++|+|.|.+.+. ... ..+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~l---------------------n~nv~~~DYSGyG~S~G~ps--E~n---~y~ 113 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFL---------------------NCNVVSYDYSGYGRSSGKPS--ERN---LYA 113 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcc---------------------cceEEEEecccccccCCCcc--ccc---chh
Confidence 4789999999776665555556665432 89999999999999987664 333 344
Q ss_pred HHHHHHHHh----C-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhh
Q 015550 116 DVIALMDHL----G-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (405)
Q Consensus 116 dl~~~l~~l----~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (405)
|+.++.+.+ | .++++|+|+|+|+..++.+|.+.| +.++||.+|...+.. .+...
T Consensus 114 Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r---------------v~~~~---- 172 (258)
T KOG1552|consen 114 DIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR---------------VAFPD---- 172 (258)
T ss_pred hHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh---------------hhccC----
Confidence 444444433 3 578999999999999999999998 999999998631110 00000
Q ss_pred hhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeec
Q 015550 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (405)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~ 270 (405)
.. . .+.++ .....+.++.++||||++||+
T Consensus 173 ---~~------------------------------------~-~~~~d-----------~f~~i~kI~~i~~PVLiiHgt 201 (258)
T KOG1552|consen 173 ---TK------------------------------------T-TYCFD-----------AFPNIEKISKITCPVLIIHGT 201 (258)
T ss_pred ---cc------------------------------------e-EEeec-----------cccccCcceeccCCEEEEecc
Confidence 00 0 00000 001146678899999999999
Q ss_pred CCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 271 HDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 271 ~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
+|.+++..+..++.+......+-.++.| ||.- .+...++.+.+..|+......
T Consensus 202 dDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~-~~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 202 DDEVVDFSHGKALYERCKEKVEPLWVKGAGHND-IELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred cCceecccccHHHHHhccccCCCcEEecCCCcc-cccCHHHHHHHHHHHHHhccc
Confidence 9999999999999998744457677777 8876 455558888999999877643
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=178.23 Aligned_cols=264 Identities=16% Similarity=0.167 Sum_probs=146.3
Q ss_pred CCeEEEEecCCCCCCchhhh-----HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 36 PTKVILITGLAGTHDAWGPQ-----LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~-----~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
.++|||+||++.+...|+.+ ++.|.+ +||+|+++|+ |.++.+.....+++
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~----------------------~g~~v~~~d~---G~~~~~~~~~~~~l 121 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHR----------------------AGLDPWVIDF---GSPDKVEGGMERNL 121 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHH----------------------CCCEEEEEcC---CCCChhHcCccCCH
Confidence 36799999999999999875 777866 4999999994 66665443234577
Q ss_pred HHHHHHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCCcc-chhHHHHH----HH-
Q 015550 111 KIMAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPK-LDLQTLSI----AI- 180 (405)
Q Consensus 111 ~~~~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~----~~- 180 (405)
.+++..+.+.++. +..++++++||||||++++.+++.+ |++|+++|+++++.......+. +....... ..
T Consensus 122 ~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 201 (994)
T PRK07868 122 ADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMAD 201 (994)
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchh
Confidence 7777666666654 3346899999999999999998755 5689999998887422111010 00000000 00
Q ss_pred HHhhc-cChhhhh--c---cCccccc--CHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhc-ccC
Q 015550 181 RFFRA-KTPEKRA--A---VDLDTHY--SQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMT 250 (405)
Q Consensus 181 ~~~~~-~~~~~~~--~---~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 250 (405)
..... ..+.... . ....... ...++........ ........+.....-. ......+...+..++.. ...
T Consensus 202 ~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~-~~~g~~~~~~~~~~~~~n~~~ 280 (994)
T PRK07868 202 HVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI-AWSGPAISELLKQFIAHNRMM 280 (994)
T ss_pred hhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc-ccchHHHHHHHHHHHHhCccc
Confidence 00000 0000000 0 0000000 0000000000000 0000001111000000 00000001111111110 000
Q ss_pred ------hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEE-EEcCC-Ccccccc---CHHHHHHHHHHHHH
Q 015550 251 ------QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARM-IDLPG-GHLVSHE---RTEEVNQALIDLIK 319 (405)
Q Consensus 251 ------~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l-~~~~g-gH~~~~e---~p~~v~~~i~~fl~ 319 (405)
......++++++|+|+|+|++|.++|++.++.+.+.+ +++++ ..+++ ||+.++- -++++...|.+||+
T Consensus 281 ~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 281 TGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVK 359 (994)
T ss_pred CceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHH
Confidence 0111247889999999999999999999999999876 88887 45565 9987763 57899999999999
Q ss_pred hhcCCCC
Q 015550 320 ASEKKIS 326 (405)
Q Consensus 320 ~~~~~~~ 326 (405)
+......
T Consensus 360 ~~~~~~~ 366 (994)
T PRK07868 360 WLEGDGD 366 (994)
T ss_pred HhccCCC
Confidence 8776543
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=142.19 Aligned_cols=223 Identities=16% Similarity=0.116 Sum_probs=151.3
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
++.|+++|-.|+++..|+.+...|.. .+.++++++||+|.--..+. ..+++.+++
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-----------------------~iel~avqlPGR~~r~~ep~--~~di~~Lad 61 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-----------------------DIELLAVQLPGRGDRFGEPL--LTDIESLAD 61 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-----------------------hhheeeecCCCcccccCCcc--cccHHHHHH
Confidence 34699999999999999999998886 79999999999998754443 668999999
Q ss_pred HHHHHHH-HhCCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCCCCCccchhH---HHHHHHHHhhccCh
Q 015550 116 DVIALMD-HLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQ---TLSIAIRFFRAKTP 188 (405)
Q Consensus 116 dl~~~l~-~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 188 (405)
.+..-+. -...+++.++||||||++|.++|.+.. ..+..+.+.++..+.......+... .+.....-+....+
T Consensus 62 ~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~ 141 (244)
T COG3208 62 ELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPP 141 (244)
T ss_pred HHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCCh
Confidence 9988887 354578999999999999999998742 2266777777665433222222111 11111111111111
Q ss_pred hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
+... +.++.+-+...+... ...+-.... ..-..+.||+.++.
T Consensus 142 e~le----------------------d~El~~l~LPilRAD-----------~~~~e~Y~~-----~~~~pl~~pi~~~~ 183 (244)
T COG3208 142 ELLE----------------------DPELMALFLPILRAD-----------FRALESYRY-----PPPAPLACPIHAFG 183 (244)
T ss_pred HHhc----------------------CHHHHHHHHHHHHHH-----------HHHhccccc-----CCCCCcCcceEEec
Confidence 1111 111111111111100 000000000 01145779999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
|++|..+..+....|.++.....+++.++|||+...++.+++...|.+.+...
T Consensus 184 G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 184 GEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred cCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhhhh
Confidence 99999999999999999887789999999999999999999999999998654
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-18 Score=140.69 Aligned_cols=215 Identities=18% Similarity=0.190 Sum_probs=147.3
Q ss_pred ccCCEEEEE-EE-ccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 21 NDNGIKIFY-RT-YGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 21 ~~~g~~i~y-~~-~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
+-|.++++- .. .....|+++++||..|+....-+.+..+-.. -+.+|+.+++||+|.
T Consensus 61 T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~---------------------l~mnv~ivsYRGYG~ 119 (300)
T KOG4391|consen 61 TRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVN---------------------LKMNVLIVSYRGYGK 119 (300)
T ss_pred cCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHH---------------------cCceEEEEEeecccc
Confidence 345555542 22 2336789999999999998877777655443 289999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
|.+.+. -+.+.-|..++++++ ...+++++|.|.||.+|+.+|+...+++.++|+-++... +.
T Consensus 120 S~Gsps-----E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~S-------Ip 187 (300)
T KOG4391|consen 120 SEGSPS-----EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLS-------IP 187 (300)
T ss_pred CCCCcc-----ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhcc-------ch
Confidence 987663 233445666677766 335899999999999999999999999999999887521 00
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
..... +...+...++.. |..+....
T Consensus 188 ~~~i~------------------~v~p~~~k~i~~-------------------------------------lc~kn~~~ 212 (300)
T KOG4391|consen 188 HMAIP------------------LVFPFPMKYIPL-------------------------------------LCYKNKWL 212 (300)
T ss_pred hhhhh------------------eeccchhhHHHH-------------------------------------HHHHhhhc
Confidence 00000 000000001110 01111112
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
....++..+.|.|+|.|..|.++||-..+.+.+..+ ...++.++|+ .|.-.+- -+-..++|.+||.+....
T Consensus 213 S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 213 SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred chhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccC
Confidence 234456677999999999999999999999999762 3578999997 6865443 346789999999998754
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=140.57 Aligned_cols=260 Identities=17% Similarity=0.188 Sum_probs=151.5
Q ss_pred cccCCEEEEEEEccC---CCCeEEEEecCCCCCCc-hhhhH-----hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQL-----KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~-~~~~~-----~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
++..-..+++..+|+ ++|++|-.|-.|-++.+ |..+. ..+.+ .|.++-
T Consensus 4 v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-----------------------~f~i~H 60 (283)
T PF03096_consen 4 VETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-----------------------NFCIYH 60 (283)
T ss_dssp EEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-----------------------TSEEEE
T ss_pred eccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-----------------------ceEEEE
Confidence 445566888888896 36889999999998876 66654 44555 899999
Q ss_pred ecCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 91 FDNRGMGRSS--VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 91 ~D~~G~G~S~--~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+|.||+..-. .+......|++++++++.+++++++++.++.+|--.||.|..++|..+|++|.++||+++.+....+.
T Consensus 61 i~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~ 140 (283)
T PF03096_consen 61 IDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM 140 (283)
T ss_dssp EE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH
T ss_pred EeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH
Confidence 9999996543 33333355899999999999999999999999999999999999999999999999999875332221
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhH-HHhhhCCCch--hHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY-LEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
.+...+.... .+..... .....++ +..+++.... ...+.+.|...+...... ..+..++
T Consensus 141 Ew~~~K~~~~---~L~~~gm---------t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np------~Nl~~f~ 202 (283)
T PF03096_consen 141 EWFYQKLSSW---LLYSYGM---------TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINP------KNLALFL 202 (283)
T ss_dssp HHHHHHHH----------CT---------TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTH------HHHHHHH
T ss_pred HHHHHHHhcc---ccccccc---------ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCH------HHHHHHH
Confidence 1111111111 1111000 0111111 1222221111 223455555555432211 1122223
Q ss_pred hcccChh-hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 246 MHKMTQK-DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 246 ~~~~~~~-~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
.....+. .........||+|++.|+..+.. +.+.++..++. .+.++..+++ |-++..|+|+.+++.+.-|++...
T Consensus 203 ~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 203 NSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp HHHHT-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred HHHhccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 2222222 22334566799999999888754 56678888884 4578888887 999999999999999999998753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-16 Score=141.45 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=113.2
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC---------
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK--------- 104 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~--------- 104 (405)
+..|.||++||++++...|.++++.|.. .++.+..++.+|...+.....
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~----------------------~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~ 71 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAP----------------------AFPDALVVSVGGPEPSGNGAGRQWFSVQGI 71 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHH----------------------HCCCCEEECCCCCCCcCCCCCcccccCCCC
Confidence 3557899999999999999999999976 244445555555432211100
Q ss_pred CCCCC---HHHHHHHHHHHHH----HhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 105 KTEYT---TKIMAKDVIALMD----HLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 105 ~~~~~---~~~~~~dl~~~l~----~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
..... ..+..+.+.++++ ..++ ++++++|||+||.+++.++.++|+.+.+++.+++.. +..
T Consensus 72 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~------~~~---- 141 (232)
T PRK11460 72 TEDNRQARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY------ASL---- 141 (232)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc------ccc----
Confidence 00111 1222233333333 3343 579999999999999999999998888888776431 000
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
+
T Consensus 142 ------------~------------------------------------------------------------------- 142 (232)
T PRK11460 142 ------------P------------------------------------------------------------------- 142 (232)
T ss_pred ------------c-------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.....++|++++||++|.++|.+.++++.+.+ ..+++++++++ ||.+..+.-+.+.+.|.+++
T Consensus 143 ~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 143 ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 00012479999999999999999999988877 23578888898 99986544444444444443
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-15 Score=130.02 Aligned_cols=114 Identities=29% Similarity=0.387 Sum_probs=99.6
Q ss_pred EEEEEEEccC-CCC--eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 25 IKIFYRTYGR-GPT--KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 25 ~~i~y~~~G~-~~p--~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
++--|.+..+ |.| +||-+||-+|++..|+.+.+.|.+ .|+++|.+++||+|.++.
T Consensus 21 ~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~----------------------~~iR~I~iN~PGf~~t~~ 78 (297)
T PF06342_consen 21 VQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDE----------------------AGIRFIGINYPGFGFTPG 78 (297)
T ss_pred EEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHH----------------------cCeEEEEeCCCCCCCCCC
Confidence 3445666654 444 799999999999999999999988 599999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCc-cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
++. ..|+-.+...-+.++++.++++ +++.+|||.|+-.|+.+|..+| ..++++++|++.
T Consensus 79 ~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 79 YPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred Ccc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 776 5889999999999999999885 6888999999999999999996 679999999864
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=132.64 Aligned_cols=266 Identities=17% Similarity=0.165 Sum_probs=173.5
Q ss_pred cccCCEEEEEEEccC---CCCeEEEEecCCCCCCc-hhhh-----HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQ-----LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~-~~~~-----~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
+++.-..+++..+|+ ++|.+|-.|.++-++.+ |..+ +..+.. .|.|+.
T Consensus 27 V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-----------------------~fcv~H 83 (326)
T KOG2931|consen 27 VETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-----------------------HFCVYH 83 (326)
T ss_pred eccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-----------------------heEEEe
Confidence 444445788888886 35778889999998866 6544 344554 699999
Q ss_pred ecCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 91 FDNRGMGRS--SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 91 ~D~~G~G~S--~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+|.|||-.- .-+.+...-+++++++++..++++++.+.++-+|--.|+.|..++|..||+||.+|||+++.+....+.
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi 163 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI 163 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH
Confidence 999999544 334433355899999999999999999999999999999999999999999999999999875332221
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc--hhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
.+...+.. ..++......... ..-.+...++... ....+.++|.+.+.......+ +...++++..
T Consensus 164 ew~~~K~~---s~~l~~~Gmt~~~--------~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~N--l~~fl~ayn~ 230 (326)
T KOG2931|consen 164 EWAYNKVS---SNLLYYYGMTQGV--------KDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKN--LALFLNAYNG 230 (326)
T ss_pred HHHHHHHH---HHHHHhhchhhhH--------HHHHHHHHhccccccccHHHHHHHHHHHHhcCChhH--HHHHHHHhcC
Confidence 11111111 1111111111100 0111222232221 244566777776655433222 1222333332
Q ss_pred cccChhhhhhh-hhcCCcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 247 HKMTQKDIQTI-RSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 247 ~~~~~~~~~~l-~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
+.......... ..++||+|++.|++.+.+ +.+.++..++ ..+..+..+.+ |-.+..++|..+.+.+.-|++...-
T Consensus 231 R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 231 RRDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGY 308 (326)
T ss_pred CCCccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCc
Confidence 22222222111 256799999999888754 4666777777 34677888877 9999999999999999999988763
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-16 Score=142.39 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=85.2
Q ss_pred CCeEEEEecCCCCC----CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 36 PTKVILITGLAGTH----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 36 ~p~vvllHG~~~~~----~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
.++||++||+++.. ..|..+++.|.+ +||+|+++|+||||.|..... ..+++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~----------------------~Gy~Vl~~Dl~G~G~S~g~~~--~~~~~ 80 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAA----------------------GGFGVLQIDLYGCGDSAGDFA--AARWD 80 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHH----------------------CCCEEEEECCCCCCCCCCccc--cCCHH
Confidence 35799999998753 346667788876 499999999999999976543 45778
Q ss_pred HHHHHHHHHHH---HhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 112 IMAKDVIALMD---HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 112 ~~~~dl~~~l~---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+++|+.++++ +.+.++++++||||||.+++.+|.++|++++++|+++|..
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 88888777554 4467899999999999999999999999999999999864
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.9e-15 Score=134.72 Aligned_cols=117 Identities=22% Similarity=0.312 Sum_probs=79.8
Q ss_pred CCEEEEEEEc------cCCCCeEEEEecCCCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 23 NGIKIFYRTY------GRGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 23 ~g~~i~y~~~------G~~~p~vvllHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
-+..+.|..+ +.+-|+|+++||++++...|... ...+.. .|+.|+.+|.
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~Vv~pd~ 85 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAA----------------------RGIALVAPDT 85 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhh----------------------cCeEEEecCC
Confidence 3445555554 23457899999999988776432 233333 4999999998
Q ss_pred CCCCC-----CCC-----C-------C-C------CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 94 RGMGR-----SSV-----P-------V-K------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 94 ~G~G~-----S~~-----~-------~-~------~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
.++|. +.. . . . ...+-.+++.+.+....+.++.++++++||||||..|+.++.++|
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p 165 (283)
T PLN02442 86 SPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP 165 (283)
T ss_pred CCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc
Confidence 87661 110 0 0 0 001123344444555555567789999999999999999999999
Q ss_pred cccceEEEeccC
Q 015550 150 ERVLSLALLNVT 161 (405)
Q Consensus 150 ~~v~~lvl~~~~ 161 (405)
+++++++++++.
T Consensus 166 ~~~~~~~~~~~~ 177 (283)
T PLN02442 166 DKYKSVSAFAPI 177 (283)
T ss_pred hhEEEEEEECCc
Confidence 999999999876
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.1e-16 Score=137.01 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=134.2
Q ss_pred CCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
..|.||++||+.|+..+ | +.+...+.+ +||.|+++|.|||+.+...... -|+ .-
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~----------------------rg~~~Vv~~~Rgcs~~~n~~p~-~yh-~G 129 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSR----------------------RGWLVVVFHFRGCSGEANTSPR-LYH-SG 129 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHh----------------------cCCeEEEEecccccCCcccCcc-eec-cc
Confidence 34789999999887754 3 445566666 5999999999999998653321 121 12
Q ss_pred HHHHHHHHHHHh----CCccEEEEEEChhH-HHHHHHHHhCCc-ccceEEEeccCCCCCCCCccchhHHHHH-----HHH
Q 015550 113 MAKDVIALMDHL----GWKQAHVFGHSMGA-MIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKLDLQTLSI-----AIR 181 (405)
Q Consensus 113 ~~~dl~~~l~~l----~~~~v~lvGhS~Gg-~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~-----~~~ 181 (405)
+.+|+..+++.+ ...++..+|.|+|| +++..++..--+ .+.+.+.++.+..-..+.+.++...... ..+
T Consensus 130 ~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~ 209 (345)
T COG0429 130 ETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLR 209 (345)
T ss_pred chhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHH
Confidence 225555555544 55799999999999 666666655322 3455555554321111111111111100 001
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchh-HHHHHH--HHhhhhhccccCcccchhhhHHhhhcccChhhhhhhh
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRR-AILYQE--YVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (405)
.+....... +..+-...... ....+. .+..++..--....++......+ . .......+.
T Consensus 210 ~L~~~~~~k--------------l~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYY-r---~aSs~~~L~ 271 (345)
T COG0429 210 NLKRNAARK--------------LKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYY-R---QASSLPLLP 271 (345)
T ss_pred HHHHHHHHH--------------HHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHH-H---hcccccccc
Confidence 111100000 00000000000 001110 01111111111222333222221 1 122345678
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC-CCcccccc----CHH-HHHHHHHHHHHhhc
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHE----RTE-EVNQALIDLIKASE 322 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~-ggH~~~~e----~p~-~v~~~i~~fl~~~~ 322 (405)
+|.+|+||||..+|++++++...+......|+..+..-+ |||..++. ++. ...+.|.+|++...
T Consensus 272 ~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 272 KIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 899999999999999999988887777566888888776 69998887 343 45677888887654
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.9e-15 Score=123.96 Aligned_cols=215 Identities=19% Similarity=0.270 Sum_probs=131.1
Q ss_pred eEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 38 KVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 38 ~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.+|++||+-++... ...++..|.+ .|+.++.||++|.|.|...-....|.. .++
T Consensus 35 ~vvlcHGfrS~Kn~~~~~~vA~~~e~----------------------~gis~fRfDF~GnGeS~gsf~~Gn~~~--ead 90 (269)
T KOG4667|consen 35 IVVLCHGFRSHKNAIIMKNVAKALEK----------------------EGISAFRFDFSGNGESEGSFYYGNYNT--EAD 90 (269)
T ss_pred EEEEeeccccccchHHHHHHHHHHHh----------------------cCceEEEEEecCCCCcCCccccCcccc--hHH
Confidence 69999999887753 4566777777 599999999999999987654334443 569
Q ss_pred HHHHHHHHhCCc-c--EEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 116 DVIALMDHLGWK-Q--AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 116 dl~~~l~~l~~~-~--v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
|+..++.++.-. + -+++|||-||-+++.+|.++++ +.-+|-+++-... ..... ..+.
T Consensus 91 DL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl--------~~~I~---eRlg-------- 150 (269)
T KOG4667|consen 91 DLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL--------KNGIN---ERLG-------- 150 (269)
T ss_pred HHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccch--------hcchh---hhhc--------
Confidence 999999998533 2 3679999999999999999987 6666666543210 00000 0000
Q ss_pred ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhh--hcCCcEEEEeec
Q 015550 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR--SAGFLVSVIHGR 270 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvlvi~G~ 270 (405)
+.+++.... +.++..-.+. ..+.+ .....+....+..+.-+... ..+||||-+||.
T Consensus 151 ---------~~~l~~ike---------~Gfid~~~rk---G~y~~-rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs 208 (269)
T KOG4667|consen 151 ---------EDYLERIKE---------QGFIDVGPRK---GKYGY-RVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGS 208 (269)
T ss_pred ---------ccHHHHHHh---------CCceecCccc---CCcCc-eecHHHHHHHHhchhhhhhcCcCccCceEEEecc
Confidence 000000000 0000000000 00000 00011111111122222222 247999999999
Q ss_pred CCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 271 HDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 271 ~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.|.++|.+.+.++++.+ ++.++..++| .|..... ..+.+.....|.+.
T Consensus 209 ~D~IVPve~AkefAk~i-~nH~L~iIEgADHnyt~~-q~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 209 EDEIVPVEDAKEFAKII-PNHKLEIIEGADHNYTGH-QSQLVSLGLEFIKT 257 (269)
T ss_pred CCceeechhHHHHHHhc-cCCceEEecCCCcCccch-hhhHhhhcceeEEe
Confidence 99999999999999987 8899999999 8876433 34555555555544
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.2e-15 Score=149.47 Aligned_cols=227 Identities=21% Similarity=0.223 Sum_probs=144.3
Q ss_pred cccccCCEEEEEEEccC---CC----CeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 18 AALNDNGIKIFYRTYGR---GP----TKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~----p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
++...||.+|+....-+ ++ |+||++||.+..... |......|+. +||.|
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~----------------------~G~~V 426 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLAS----------------------AGYAV 426 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhc----------------------CCeEE
Confidence 34556888888877654 22 789999999865544 5566667766 59999
Q ss_pred EEecCCCCCCC---CCC--C-CCCCCCHHHHHHHHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 89 CAFDNRGMGRS---SVP--V-KKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 89 i~~D~~G~G~S---~~~--~-~~~~~~~~~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
+.+|+||-+.- -.. . .......+++.+.+. ++...+ .++++++|||+||.+++..+...| ++++.+...
T Consensus 427 ~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~ 504 (620)
T COG1506 427 LAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVA 504 (620)
T ss_pred EEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEecc
Confidence 99999976442 111 1 112335555655555 444443 248999999999999999999988 777777666
Q ss_pred cCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchh
Q 015550 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (405)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
+...... .........+.. ............ +.|
T Consensus 505 ~~~~~~~---------------~~~~~~~~~~~~-----------~~~~~~~~~~~~---~~~----------------- 538 (620)
T COG1506 505 GGVDWLL---------------YFGESTEGLRFD-----------PEENGGGPPEDR---EKY----------------- 538 (620)
T ss_pred Ccchhhh---------------hccccchhhcCC-----------HHHhCCCcccCh---HHH-----------------
Confidence 5421000 000000000000 000000000000 000
Q ss_pred hhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-cCHHHHHHHH
Q 015550 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ERTEEVNQAL 314 (405)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-e~p~~v~~~i 314 (405)
..........++++|+|+|||++|..+|.+.+.++.+.| ...++++++|+ ||.+.. ++...+.+.+
T Consensus 539 ---------~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 539 ---------EDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred ---------HhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 011223445788899999999999999999999999887 35689999998 998876 4567788888
Q ss_pred HHHHHhhcC
Q 015550 315 IDLIKASEK 323 (405)
Q Consensus 315 ~~fl~~~~~ 323 (405)
.+|+++...
T Consensus 610 ~~~~~~~~~ 618 (620)
T COG1506 610 LDWFKRHLK 618 (620)
T ss_pred HHHHHHHhc
Confidence 888887653
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.4e-15 Score=129.53 Aligned_cols=184 Identities=22% Similarity=0.271 Sum_probs=113.4
Q ss_pred CCeEEEEecCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVPVK--KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
+||.|+.+|+||.+....... .....-....+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~ 92 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAA 92 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEE
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeee
Confidence 599999999999875321100 00111223455666666554 3368999999999999999999999999999
Q ss_pred EEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcc
Q 015550 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (405)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
|..++............. +........ .........+..
T Consensus 93 v~~~g~~d~~~~~~~~~~--------------------------~~~~~~~~~-~~~~~~~~~~~~-------------- 131 (213)
T PF00326_consen 93 VAGAGVSDLFSYYGTTDI--------------------------YTKAEYLEY-GDPWDNPEFYRE-------------- 131 (213)
T ss_dssp EEESE-SSTTCSBHHTCC--------------------------HHHGHHHHH-SSTTTSHHHHHH--------------
T ss_pred eccceecchhcccccccc--------------------------ccccccccc-Cccchhhhhhhh--------------
Confidence 999876321111100000 000000000 000000111111
Q ss_pred cchhhhHHhhhcccChhhhhhhhh--cCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccc-ccCHH
Q 015550 236 GFDGQIHACWMHKMTQKDIQTIRS--AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-HERTE 308 (405)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~-~e~p~ 308 (405)
......+.+ +++|+|++||++|..+|++.+.++.+.+ ..+++++++++ ||... .+...
T Consensus 132 ---------------~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 132 ---------------LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp ---------------HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred ---------------hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 011122333 6799999999999999999999998877 34589999998 99555 34556
Q ss_pred HHHHHHHHHHHhhcC
Q 015550 309 EVNQALIDLIKASEK 323 (405)
Q Consensus 309 ~v~~~i~~fl~~~~~ 323 (405)
++.+.+.+|+++...
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 889999999988654
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.5e-15 Score=137.29 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=75.1
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
..|+|||+||++.+...|..+++.|+. .||.|+++|++|++.+.... ...+..+..
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las----------------------~G~~VvapD~~g~~~~~~~~--~i~d~~~~~ 106 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIAS----------------------HGFIVVAPQLYTLAGPDGTD--EIKDAAAVI 106 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHh----------------------CCCEEEEecCCCcCCCCchh--hHHHHHHHH
Confidence 347899999999999999999999987 49999999999975432111 011122223
Q ss_pred HHHHHHHHH-------hCCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccC
Q 015550 115 KDVIALMDH-------LGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 161 (405)
+.+.+.++. .+.++++++||||||.+|+.+|..+++ +++++|++++.
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 333332222 234689999999999999999999874 58999999876
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.3e-14 Score=128.42 Aligned_cols=118 Identities=22% Similarity=0.313 Sum_probs=82.8
Q ss_pred CCEEEEEEEccC------CCCeEEEEecCCCCCCchhhh--HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC-
Q 015550 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN- 93 (405)
Q Consensus 23 ~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~- 93 (405)
-+..+.|..+-+ ..|+|+++||++++...|... +..+... .|+.|+++|.
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~---------------------~g~~Vv~Pd~~ 81 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAE---------------------HGLALVAPDTS 81 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhh---------------------cCcEEEEeCCC
Confidence 445555555543 247899999999999888532 3344431 3899999998
Q ss_pred -CCCCCCCCCC------------------CCCCCCHHH-HHHHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhCCc
Q 015550 94 -RGMGRSSVPV------------------KKTEYTTKI-MAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 94 -~G~G~S~~~~------------------~~~~~~~~~-~~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
+|+|.+.... ....++..+ +++++..+++. ++.++++++||||||.+|+.++.++|+
T Consensus 82 ~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~ 161 (275)
T TIGR02821 82 PRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD 161 (275)
T ss_pred CCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc
Confidence 5555332110 001223333 46788888876 355789999999999999999999999
Q ss_pred ccceEEEeccC
Q 015550 151 RVLSLALLNVT 161 (405)
Q Consensus 151 ~v~~lvl~~~~ 161 (405)
.+++++++++.
T Consensus 162 ~~~~~~~~~~~ 172 (275)
T TIGR02821 162 RFKSVSAFAPI 172 (275)
T ss_pred cceEEEEECCc
Confidence 99999999876
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-14 Score=126.80 Aligned_cols=219 Identities=16% Similarity=0.198 Sum_probs=136.5
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCC-eEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g-~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
+|+|+|+.+++...|.++++.|.. . +.|++++.+|.+....+ ..+++++++.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-----------------------~~~~v~~i~~~~~~~~~~~----~~si~~la~~ 54 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-----------------------DVIGVYGIEYPGRGDDEPP----PDSIEELASR 54 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-----------------------TEEEEEEECSTTSCTTSHE----ESSHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-----------------------CeEEEEEEecCCCCCCCCC----CCCHHHHHHH
Confidence 699999999999999999999987 5 99999999999833322 4589999999
Q ss_pred HHHHHHHhCCc-cEEEEEEChhHHHHHHHHHhC---CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 117 VIALMDHLGWK-QAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 117 l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
..+.+.....+ +++|+|||+||.+|..+|.+- ...|..++++++..+...................+......
T Consensus 55 y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 131 (229)
T PF00975_consen 55 YAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGT--- 131 (229)
T ss_dssp HHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHH---
T ss_pred HHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCC---
Confidence 99888877655 999999999999999999763 34599999999764332111111111111100111000000
Q ss_pred ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCC
Q 015550 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D 272 (405)
.............+...+... ........ ........+|.++.....|
T Consensus 132 ----------------~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 179 (229)
T PF00975_consen 132 ----------------PDASLEDEELLARLLRALRDD-----------FQALENYS-----IRPIDKQKVPITLFYALDD 179 (229)
T ss_dssp ----------------HHHHCHHHHHHHHHHHHHHHH-----------HHHHHTCS------TTSSSESSEEEEEEECSS
T ss_pred ----------------chhhhcCHHHHHHHHHHHHHH-----------HHHHhhcc-----CCccccCCCcEEEEecCCC
Confidence 000000000011111111000 00000000 0001111467899999999
Q ss_pred ccCCHH---HHHHHHHHhCCCeEEEEcCCCcccccc-CHHHHHHHHHHHH
Q 015550 273 VIAQIC---YARRLAEKLYPVARMIDLPGGHLVSHE-RTEEVNQALIDLI 318 (405)
Q Consensus 273 ~~~~~~---~~~~l~~~l~~~~~l~~~~ggH~~~~e-~p~~v~~~i~~fl 318 (405)
...... ....+.+......+++.++|+|+.++. +..++++.|.++|
T Consensus 180 ~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 180 PLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHSTTHHHHHHHHHHHH
T ss_pred ccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecchHHHHHHHHHhccC
Confidence 988766 344566655556789999999998887 7788999888875
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.2e-14 Score=137.02 Aligned_cols=249 Identities=14% Similarity=0.107 Sum_probs=144.8
Q ss_pred ccccCCCCccc-ccCCEEEEEEEc-cC--CCCeEEEEecCCCCCCch-----hhhHhhhcCCCCCCCCchhhhccccCCC
Q 015550 10 KEQSAAPDAAL-NDNGIKIFYRTY-GR--GPTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESG 80 (405)
Q Consensus 10 ~~~~~~~~~~~-~~~g~~i~y~~~-G~--~~p~vvllHG~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 80 (405)
+.....|.+++ ..+-.++..+.- .. .++|||+++.+......| ..+++.|.+
T Consensus 185 ~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~------------------- 245 (560)
T TIGR01839 185 KNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLK------------------- 245 (560)
T ss_pred CCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHH-------------------
Confidence 44444455444 344444443322 11 235799999998666656 467888877
Q ss_pred CCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHH----HHHhCCc-c
Q 015550 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACK----LAAMVPE-R 151 (405)
Q Consensus 81 l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~----~a~~~p~-~ 151 (405)
+||+|+.+|+++-+... ..++++++++.+.+.++.+ |.++++++||||||.++.. +++++++ +
T Consensus 246 ---qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~ 317 (560)
T TIGR01839 246 ---NQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRK 317 (560)
T ss_pred ---cCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCc
Confidence 69999999999876653 3568888888777777765 6789999999999999987 7888886 8
Q ss_pred cceEEEeccCCCCCCCC---ccchhHHHHHHHHHh--hccChhhhhc--c---CcccccCHhHHHhh-------------
Q 015550 152 VLSLALLNVTGGGFQCC---PKLDLQTLSIAIRFF--RAKTPEKRAA--V---DLDTHYSQEYLEEY------------- 208 (405)
Q Consensus 152 v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~--~---~~~~~~~~~~~~~~------------- 208 (405)
|++++++.+.......- ...+...+....... ....+..... + ........-++..+
T Consensus 318 V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~ 397 (560)
T TIGR01839 318 VNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILY 397 (560)
T ss_pred eeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHH
Confidence 99999998865422110 001111111100000 0000000000 0 00000000001111
Q ss_pred -hCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh-------hhhhhhhhcCCcEEEEeecCCccCCHHH
Q 015550 209 -VGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ-------KDIQTIRSAGFLVSVIHGRHDVIAQICY 279 (405)
Q Consensus 209 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~i~~Pvlvi~G~~D~~~~~~~ 279 (405)
..+.. ....++.+|...+ ....+.. ...-.+++|+||++++.|+.|.|+|++.
T Consensus 398 Wn~D~t~lPg~~~~e~l~ly------------------~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s 459 (560)
T TIGR01839 398 WNNDTTRLPAAFHGDLLDMF------------------KSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDA 459 (560)
T ss_pred HhCcCccchHHHHHHHHHHH------------------hcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHH
Confidence 11111 1111222222111 1111111 1123468899999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCcccc
Q 015550 280 ARRLAEKLYPVARMIDLPGGHLVS 303 (405)
Q Consensus 280 ~~~l~~~l~~~~~l~~~~ggH~~~ 303 (405)
+..+.+.+..+.+++..++||..-
T Consensus 460 ~~~~~~l~gs~~~fvl~~gGHIgg 483 (560)
T TIGR01839 460 VYRSALLLGGKRRFVLSNSGHIQS 483 (560)
T ss_pred HHHHHHHcCCCeEEEecCCCcccc
Confidence 999999886678888888899654
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.5e-14 Score=129.81 Aligned_cols=251 Identities=14% Similarity=0.189 Sum_probs=131.8
Q ss_pred CCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
..|.||++||+.+++.. | +.++..+.+ +||+|+.++.||+|.|.-.+.. -| ...
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~----------------------~G~r~VVfN~RG~~g~~LtTpr-~f-~ag 179 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQR----------------------KGYRVVVFNHRGLGGSKLTTPR-LF-TAG 179 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHh----------------------CCcEEEEECCCCCCCCccCCCc-ee-ecC
Confidence 45889999999877643 3 344444444 5999999999999999765541 22 222
Q ss_pred HHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcc---cceEEEeccCCCCCCCCccchhHHHHHHHHHhhc
Q 015550 113 MAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPER---VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (405)
Q Consensus 113 ~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (405)
+.+|+.++++++ ...++..+|.||||++.+.|..+..++ +.++++.+|.- .......+........+.....
T Consensus 180 ~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd-~~~~~~~~~~~~~~~~y~~~l~ 258 (409)
T KOG1838|consen 180 WTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD-LLAASRSIETPLYRRFYNRALT 258 (409)
T ss_pred CHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch-hhhhhhHHhcccchHHHHHHHH
Confidence 445666666655 456899999999999999998875443 44555555431 1000000111111111111111
Q ss_pred cChhhhhccCccccc-CHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcE
Q 015550 186 KTPEKRAAVDLDTHY-SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (405)
Q Consensus 186 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (405)
............... .....+..... ...+++-+.+ ....++|.. ...++.. ......+.+|++|+
T Consensus 259 ~~l~~~~~~~r~~~~~~~vd~d~~~~~-----~SvreFD~~~----t~~~~gf~~-~deYY~~---aSs~~~v~~I~VP~ 325 (409)
T KOG1838|consen 259 LNLKRIVLRHRHTLFEDPVDFDVILKS-----RSVREFDEAL----TRPMFGFKS-VDEYYKK---ASSSNYVDKIKVPL 325 (409)
T ss_pred HhHHHHHhhhhhhhhhccchhhhhhhc-----CcHHHHHhhh----hhhhcCCCc-HHHHHhh---cchhhhcccccccE
Confidence 000000000000000 00000001111 1111211111 122223332 2222222 23446678899999
Q ss_pred EEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC-CCccccccC----HHHHH-HHHHHHHHhhcC
Q 015550 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHER----TEEVN-QALIDLIKASEK 323 (405)
Q Consensus 265 lvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~-ggH~~~~e~----p~~v~-~~i~~fl~~~~~ 323 (405)
|+|+..+|+++|++....-..+-.|+.-+++-. |||..++|. +.... +.+.+|+.....
T Consensus 326 L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 326 LCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred EEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 999999999999864433332224666666554 799999886 22333 337777766654
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.4e-14 Score=123.30 Aligned_cols=179 Identities=22% Similarity=0.225 Sum_probs=105.9
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHh-hhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC------CCC---CCCC
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG------MGR---SSVP 102 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~-~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G------~G~---S~~~ 102 (405)
++..++||++||+|++.+.|..... .+.. ....++.++-|- .|. +-.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~----------------------~~~~~i~p~ap~~~~~~~~g~~~~~Wf~ 68 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLAL----------------------PNTRFISPRAPSRPVTVPGGYRMPAWFD 68 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCS----------------------TTEEEEEE---EEE-GGGTT-EEE-SS-
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccC----------------------CceEEEeccCCCCCcccccccCCCceee
Confidence 4456789999999999977665555 2222 266777665442 222 1111
Q ss_pred -----CCC--CCCCHHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 103 -----VKK--TEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 103 -----~~~--~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
... ..-.+.+.++.+.++++.. ..++++++|.|+||++|+.++.++|+.+.++|.+++.......
T Consensus 69 ~~~~~~~~~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--- 145 (216)
T PF02230_consen 69 IYDFDPEGPEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--- 145 (216)
T ss_dssp BSCSSSSSEB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---
T ss_pred ccCCCcchhhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---
Confidence 000 0112333344455555532 3468999999999999999999999999999999975210000
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
.
T Consensus 146 -------------------------------------------------------------------------------~ 146 (216)
T PF02230_consen 146 -------------------------------------------------------------------------------L 146 (216)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
....... .++|++++||++|.++|.+.++...+.+ ..+.+++.++| ||.+. .+..+.+.+||+++
T Consensus 147 ~~~~~~~--~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 147 EDRPEAL--AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HCCHCCC--CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred ccccccc--CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 0000011 1589999999999999999888888777 34688999996 99775 35555677777654
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-14 Score=136.76 Aligned_cols=113 Identities=23% Similarity=0.416 Sum_probs=86.9
Q ss_pred ccCCCCeEEEEecCCCCC--Cchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 015550 32 YGRGPTKVILITGLAGTH--DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (405)
Q Consensus 32 ~G~~~p~vvllHG~~~~~--~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~ 108 (405)
..+..|++|+|||++++. +.|.+ +.+.|... ...++||++|++|+|.+..+.. ..
T Consensus 37 Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~--------------------~~d~nVI~VDw~g~g~s~y~~a--~~ 94 (442)
T TIGR03230 37 FNHETKTFIVIHGWTVTGMFESWVPKLVAALYER--------------------EPSANVIVVDWLSRAQQHYPTS--AA 94 (442)
T ss_pred cCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhc--------------------cCCCEEEEEECCCcCCCCCccc--cc
Confidence 344567899999998754 34665 45555321 0269999999999998865543 23
Q ss_pred CHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 109 TTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 109 ~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
....+++++.++++.+ ++++++|+||||||.+|..++..+|++|.++++++|+++.+.
T Consensus 95 ~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 95 YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCccc
Confidence 4466777788777765 368999999999999999999999999999999999876554
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.8e-14 Score=119.76 Aligned_cols=172 Identities=21% Similarity=0.187 Sum_probs=115.0
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CCCCCCCCCCCCCCC-
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GMGRSSVPVKKTEYT- 109 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~G~S~~~~~~~~~~- 109 (405)
..|+||++||+|++...+-+....+.. ++.++.+--+ |-.+=........++
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P-----------------------~~~~is~rG~v~~~g~~~~f~~~~~~~~d~ 73 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILP-----------------------NATLVSPRGPVAENGGPRFFRRYDEGSFDQ 73 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCC-----------------------CCeEEcCCCCccccCcccceeecCCCccch
Confidence 446799999999999888886655555 4444443211 000000000001222
Q ss_pred ------HHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 110 ------TKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 110 ------~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
.+.+++.+..+.+..++ ++++++|+|.||++++.+..++|+.++++|++++......
T Consensus 74 edl~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------- 138 (207)
T COG0400 74 EDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------- 138 (207)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC---------------
Confidence 34455555556666666 6899999999999999999999999999999998631100
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcC
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (405)
. ..-....
T Consensus 139 ----------------------------------------------------------------------~--~~~~~~~ 146 (207)
T COG0400 139 ----------------------------------------------------------------------E--LLPDLAG 146 (207)
T ss_pred ----------------------------------------------------------------------c--cccccCC
Confidence 0 0001224
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.||+++||+.|+++|...+.++.+.+ ..+++.+++++||-+..+.- +.+.+|+..
T Consensus 147 ~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e~~----~~~~~wl~~ 204 (207)
T COG0400 147 TPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPEEL----EAARSWLAN 204 (207)
T ss_pred CeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHHHH----HHHHHHHHh
Confidence 79999999999999999888888766 45688888899997765544 444446554
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.4e-13 Score=134.61 Aligned_cols=117 Identities=17% Similarity=0.129 Sum_probs=88.9
Q ss_pred cCCEEEEEEEcc---C-CCCeEEEEecCCCCCC---ch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 22 DNGIKIFYRTYG---R-GPTKVILITGLAGTHD---AW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 22 ~~g~~i~y~~~G---~-~~p~vvllHG~~~~~~---~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.||.+|++..+- . ..|+||++||++.+.. .+ ......|.+ +||.|+++|+
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~----------------------~Gy~vv~~D~ 61 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA----------------------QGYAVVIQDT 61 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHh----------------------CCcEEEEEec
Confidence 478899865553 2 3478999999987653 12 223345555 4999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
||+|.|..... .++ ...++|+.++++.+.. .++.++||||||.+++.+|..+|++++++|..++...
T Consensus 62 RG~g~S~g~~~--~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 62 RGRGASEGEFD--LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cccccCCCceE--ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 99999986543 233 4577888888887632 4899999999999999999999999999999887643
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-14 Score=129.90 Aligned_cols=119 Identities=17% Similarity=0.293 Sum_probs=88.7
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCC-CchhhhH-hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~-~~~~~~~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
++..+.+....+..|++|+|||++++. ..|...+ ..+... .+++|+++|+++++.+.
T Consensus 23 ~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~---------------------~~~nVi~vD~~~~~~~~ 81 (275)
T cd00707 23 DPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSR---------------------GDYNVIVVDWGRGANPN 81 (275)
T ss_pred ChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhc---------------------CCCEEEEEECccccccC
Confidence 355677777777788999999999987 6676544 334321 28999999999984332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
.+. ...++..+++++.++++.+ +.++++++||||||.+|..++..+|++|.++++++|..+.
T Consensus 82 y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 82 YPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred hHH--HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 211 2334555666666666654 4468999999999999999999999999999999998643
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.1e-13 Score=126.27 Aligned_cols=209 Identities=20% Similarity=0.252 Sum_probs=111.4
Q ss_pred CeEEEEecCCCCCCchh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 37 TKVILITGLAGTHDAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
|+||++.|+-+..+.+. .+.+.|.. +|+.++++|.||.|.|...+. ..+.+.+..
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~----------------------rGiA~LtvDmPG~G~s~~~~l--~~D~~~l~~ 246 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAP----------------------RGIAMLTVDMPGQGESPKWPL--TQDSSRLHQ 246 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHH----------------------CT-EEEEE--TTSGGGTTT-S---S-CCHHHH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHh----------------------CCCEEEEEccCCCcccccCCC--CcCHHHHHH
Confidence 55666666666665544 44466766 499999999999999864332 223344556
Q ss_pred HHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 116 DVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 116 dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
.+.+.+.... ..+|.++|.|+||.+|.++|..+++|++++|.++++...+. ... .... ..|..
T Consensus 247 aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~f-----t~~------~~~~-~~P~m-- 312 (411)
T PF06500_consen 247 AVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFF-----TDP------EWQQ-RVPDM-- 312 (411)
T ss_dssp HHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGG-----H-H------HHHT-TS-HH--
T ss_pred HHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhh-----ccH------HHHh-cCCHH--
Confidence 6666666554 35899999999999999999999999999999998642111 000 0000 00100
Q ss_pred ccCcccccCHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh--hhcCCcEEEEee
Q 015550 193 AVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI--RSAGFLVSVIHG 269 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvlvi~G 269 (405)
+. ..+...++... ....+..+ ...++ -.....+ ++..+|+|.+.|
T Consensus 313 -------y~-d~LA~rlG~~~~~~~~l~~e-l~~~S-----------------------Lk~qGlL~~rr~~~plL~i~~ 360 (411)
T PF06500_consen 313 -------YL-DVLASRLGMAAVSDESLRGE-LNKFS-----------------------LKTQGLLSGRRCPTPLLAING 360 (411)
T ss_dssp -------HH-HHHHHHCT-SCE-HHHHHHH-GGGGS-----------------------TTTTTTTTSS-BSS-EEEEEE
T ss_pred -------HH-HHHHHHhCCccCCHHHHHHH-HHhcC-----------------------cchhccccCCCCCcceEEeec
Confidence 00 11111111111 11111111 11110 0011122 567799999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCeEEEEcCC-C-ccccccCHHHHHHHHHHHHHh
Q 015550 270 RHDVIAQICYARRLAEKLYPVARMIDLPG-G-HLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 270 ~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-g-H~~~~e~p~~v~~~i~~fl~~ 320 (405)
++|.++|.+..+-+++. ..+.+...++. . |..+ +.-...+.+||+.
T Consensus 361 ~~D~v~P~eD~~lia~~-s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 361 EDDPVSPIEDSRLIAES-STDGKALRIPSKPLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp TT-SSS-HHHHHHHHHT-BTT-EEEEE-SSSHHHHH----HHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHhc-CCCCceeecCCCccccch----HHHHHHHHHHHHH
Confidence 99999999999888885 46677777775 4 5443 3555666667654
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.8e-13 Score=117.29 Aligned_cols=105 Identities=14% Similarity=0.059 Sum_probs=70.5
Q ss_pred CCCeEEEEecCCCCCCchh---hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC-------
Q 015550 35 GPTKVILITGLAGTHDAWG---PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK------- 104 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~---~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~------- 104 (405)
..|.||++||.+++...|. .+...+.+ .||.|+++|.+|++.+.....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~----------------------~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~ 69 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADR----------------------YGFVLVAPEQTSYNSSNNCWDWFFTHHR 69 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHh----------------------CCeEEEecCCcCccccCCCCCCCCcccc
Confidence 4578999999998876654 23333332 399999999999875432100
Q ss_pred -CCCCCHHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 105 -KTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 105 -~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.......++.+.+..+.+..++ ++++|+||||||.+++.++.++|+++.+++.+++.
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 0011122222222222333333 58999999999999999999999999999988876
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.7e-12 Score=118.07 Aligned_cols=206 Identities=20% Similarity=0.199 Sum_probs=113.7
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC-CCCCCC-----------
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR-SSVPVK----------- 104 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~-S~~~~~----------- 104 (405)
|.||.+||.++....|...+..-.. ||.|+.+|.||+|. +.....
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~~a~~-----------------------G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~ 140 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLPWAAA-----------------------GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT 140 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHHHHHT-----------------------T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT
T ss_pred CEEEEecCCCCCCCCcccccccccC-----------------------CeEEEEecCCCCCCCCCCccccCCCCCccHHh
Confidence 5789999999998777666554444 99999999999993 311100
Q ss_pred ------CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 105 ------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
...+-...+..|+...++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...|....+ .
T Consensus 141 ~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~------~ 213 (320)
T PF05448_consen 141 RGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF------R 213 (320)
T ss_dssp TTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH------H
T ss_pred cCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch------h
Confidence 11122334556666666554 2358999999999999999999986 799999988763110 0
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhC---CC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG---SS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
.. ........+ ...+..++. .. ...+...+. ..
T Consensus 214 ~~-----~~~~~~~~~-------------y~~~~~~~~~~d~~~~~~~~v~~~-L~------------------------ 250 (320)
T PF05448_consen 214 RA-----LELRADEGP-------------YPEIRRYFRWRDPHHEREPEVFET-LS------------------------ 250 (320)
T ss_dssp HH-----HHHT--STT-------------THHHHHHHHHHSCTHCHHHHHHHH-HH------------------------
T ss_pred hh-----hhcCCcccc-------------HHHHHHHHhccCCCcccHHHHHHH-Hh------------------------
Confidence 00 000000000 000111111 10 111111110 11
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHH-HHHHHHHHHh
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEV-NQALIDLIKA 320 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v-~~~i~~fl~~ 320 (405)
..|.....+.|+|||++-.|-.|.++||...-...+.+...+++.+++. ||.... +. .+...+||.+
T Consensus 251 -Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~----~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 251 -YFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP----EFQEDKQLNFLKE 319 (320)
T ss_dssp -TT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH----HHHHHHHHHHHHH
T ss_pred -hhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh----hHHHHHHHHHHhc
Confidence 1123344578899999999999999999999999999977799999997 885433 33 5566677654
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-12 Score=121.93 Aligned_cols=253 Identities=15% Similarity=0.158 Sum_probs=143.8
Q ss_pred CeEEEEecCCCCCCch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 37 TKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
|+||++..+.++.... +.+++.|.. |+.|+..|+..-+..+... ..++++++++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-----------------------g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~ 157 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-----------------------DHDVYITDWVNARMVPLSA--GKFDLEDYID 157 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-----------------------CCcEEEEeCCCCCCCchhc--CCCCHHHHHH
Confidence 6799999988655433 456666665 9999999998777553333 3789999999
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-----CcccceEEEeccCCCCCCCCccchhH-----HHHHHHHHhhc
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTGGGFQCCPKLDLQ-----TLSIAIRFFRA 185 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 185 (405)
-+.++++++|.+ ++++|+|+||..++.+++.. |++++++++++++...-. .|..... .+.........
T Consensus 158 ~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~-~p~~v~~~a~~~~i~~~~~~~i~ 235 (406)
T TIGR01849 158 YLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA-SPTVVNELAREKPIEWFQHNVIM 235 (406)
T ss_pred HHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC-CCchHHHHhhcccHHHHHHHhhh
Confidence 999999999977 99999999999977766654 678999999998753221 1111000 00111111100
Q ss_pred c------------Chhhhhcc-----Cccccc--CHhHHHhhhCCCchhHH----HHHHHHhhhhhccccCcccchhhhH
Q 015550 186 K------------TPEKRAAV-----DLDTHY--SQEYLEEYVGSSTRRAI----LYQEYVKGISATGMQSNYGFDGQIH 242 (405)
Q Consensus 186 ~------------~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
. .+...... ....+. ...++............ .+++|.....-++ --+...+.
T Consensus 236 ~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpg----e~y~~~v~ 311 (406)
T TIGR01849 236 RVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTA----EFYLQTID 311 (406)
T ss_pred ccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcH----HHHHHHHH
Confidence 0 01000000 000000 00111222211111111 1111111111110 00111111
Q ss_pred Hhhh-cccChh------hhhhhhhcC-CcEEEEeecCCccCCHHHHHHHHHHh---C-CCeEEEEc-CCCcccccc---C
Q 015550 243 ACWM-HKMTQK------DIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKL---Y-PVARMIDL-PGGHLVSHE---R 306 (405)
Q Consensus 243 ~~~~-~~~~~~------~~~~l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l---~-~~~~l~~~-~ggH~~~~e---~ 306 (405)
..+. +.+... ..-.+++|+ +|+|.+.|++|.|+|+..+..+.+.+ . .+.+..+. ++||...+. -
T Consensus 312 ~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~ 391 (406)
T TIGR01849 312 VVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRF 391 (406)
T ss_pred HHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhh
Confidence 1111 111111 112457888 99999999999999999999888863 2 23445555 459987764 3
Q ss_pred HHHHHHHHHHHHHh
Q 015550 307 TEEVNQALIDLIKA 320 (405)
Q Consensus 307 p~~v~~~i~~fl~~ 320 (405)
.+++...|.+||.+
T Consensus 392 ~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 392 REEIYPLVREFIRR 405 (406)
T ss_pred hhhhchHHHHHHHh
Confidence 56899999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.49 E-value=5e-13 Score=118.26 Aligned_cols=176 Identities=21% Similarity=0.153 Sum_probs=114.5
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC-CCCCCCCCC--C----
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR-SSVPVKKTE--Y---- 108 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~-S~~~~~~~~--~---- 108 (405)
.|.||++|++.|-....+.+++.|++ +||.|+++|+-+-.. ......... +
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA~----------------------~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~ 71 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLAE----------------------EGYVVLAPDLFGGRGAPPSDPEEAFAAMRELF 71 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHHH----------------------TT-EEEEE-CCCCTS--CCCHHCHHHHHHHCH
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHHh----------------------cCCCEEecccccCCCCCccchhhHHHHHHHHH
Confidence 46899999998877667778888887 599999999865443 111110000 0
Q ss_pred --CHHHHHHHHHHHHHHh---C---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHH
Q 015550 109 --TTKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (405)
Q Consensus 109 --~~~~~~~dl~~~l~~l---~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (405)
..+...+++.+.++.+ . .+++.++|+|+||.+++.+|... +.+++.|..-+..
T Consensus 72 ~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~------------------ 132 (218)
T PF01738_consen 72 APRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS------------------ 132 (218)
T ss_dssp HHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS------------------
T ss_pred hhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC------------------
Confidence 1244566776666665 2 35899999999999999999887 5799888876510
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (405)
..........++
T Consensus 133 --------------------------------------------------------------------~~~~~~~~~~~~ 144 (218)
T PF01738_consen 133 --------------------------------------------------------------------PPPPPLEDAPKI 144 (218)
T ss_dssp --------------------------------------------------------------------SGGGHHHHGGG-
T ss_pred --------------------------------------------------------------------CCCcchhhhccc
Confidence 001112334567
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccC--------HHHHHHHHHHHHHh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHER--------TEEVNQALIDLIKA 320 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~--------p~~v~~~i~~fl~~ 320 (405)
++|+++++|++|..++.+..+.+.+.+ ....++++++| +|.+.... .++..+.+.+||++
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 799999999999999999878777776 56789999999 99776542 23455666777754
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-12 Score=108.78 Aligned_cols=155 Identities=23% Similarity=0.297 Sum_probs=102.8
Q ss_pred EEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 39 VILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 39 vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
|+++||++++. +.|.+..+.-.+ ..++|-..|+ + .-+.+++.+.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~----------------------~~~~V~~~~~------~------~P~~~~W~~~l 46 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE----------------------NSVRVEQPDW------D------NPDLDEWVQAL 46 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT----------------------TSEEEEEC--------T------S--HHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC----------------------CCeEEecccc------C------CCCHHHHHHHH
Confidence 68999999876 568777654433 1477777665 1 33678888888
Q ss_pred HHHHHHhCCccEEEEEEChhHHHHHHHH-HhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCc
Q 015550 118 IALMDHLGWKQAHVFGHSMGAMIACKLA-AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196 (405)
Q Consensus 118 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (405)
.+.+..+. +++++||||+|+..++.++ .....+|.+++|+++.-.. .. ....
T Consensus 47 ~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~-------~~-----------~~~~-------- 99 (171)
T PF06821_consen 47 DQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD-------DP-----------EPFP-------- 99 (171)
T ss_dssp HHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG-------CH-----------HCCT--------
T ss_pred HHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc-------cc-----------cchh--------
Confidence 88887664 6799999999999999999 7778899999999986210 00 0000
Q ss_pred ccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCC
Q 015550 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (405)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~ 276 (405)
..+.. ..... ...+.+|.++|.+++|+++|
T Consensus 100 ------~~~~~-----------------------------------------f~~~p---~~~l~~~~~viaS~nDp~vp 129 (171)
T PF06821_consen 100 ------PELDG-----------------------------------------FTPLP---RDPLPFPSIVIASDNDPYVP 129 (171)
T ss_dssp ------CGGCC-----------------------------------------CTTSH---CCHHHCCEEEEEETTBSSS-
T ss_pred ------hhccc-----------------------------------------cccCc---ccccCCCeEEEEcCCCCccC
Confidence 00000 00000 12234778999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEcCC-CccccccC
Q 015550 277 ICYARRLAEKLYPVARMIDLPG-GHLVSHER 306 (405)
Q Consensus 277 ~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~ 306 (405)
.+.++++++++ +++++.+++ ||+...+.
T Consensus 130 ~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 130 FERAQRLAQRL--GAELIILGGGGHFNAASG 158 (171)
T ss_dssp HHHHHHHHHHH--T-EEEEETS-TTSSGGGT
T ss_pred HHHHHHHHHHc--CCCeEECCCCCCcccccC
Confidence 99999999998 789999998 99987653
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.2e-12 Score=115.86 Aligned_cols=111 Identities=21% Similarity=0.239 Sum_probs=92.8
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC----CCCCCCCHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP----VKKTEYTTK 111 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~----~~~~~~~~~ 111 (405)
++.+|+|+|++|-.+.|.++++.|.+.+. ..+.|+++.+.||-.++.. .....++++
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~-------------------~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~ 62 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLN-------------------PQFEILGISHAGHSTSPSNSKFSPNGRLFSLQ 62 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCC-------------------CCCeeEEecCCCCcCCcccccccCCCCccCHH
Confidence 34689999999999999999999986432 3899999999999887655 134688999
Q ss_pred HHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCC
Q 015550 112 IMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGF 165 (405)
Q Consensus 112 ~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 165 (405)
++++...++++.+- ..+++++|||.|+++++++..+.+ .+|.+++++-|+....
T Consensus 63 ~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 63 DQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 99998888887663 247999999999999999999999 7899999999885443
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-12 Score=131.75 Aligned_cols=126 Identities=24% Similarity=0.256 Sum_probs=97.5
Q ss_pred CCCcccccCCEEEEEEEccCCC----------CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGP----------TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~----------p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (405)
.|..++..++.+|.|...|.|. |+|||+||++++.+.|..+++.|.+ +
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~----------------------~ 475 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAA----------------------A 475 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHh----------------------C
Confidence 4556677788888887766543 4799999999999999999999986 4
Q ss_pred CeEEEEecCCCCCCCCCC----------CCCCC-----------CCHHHHHHHHHHHHHHhC----------------Cc
Q 015550 85 GIEVCAFDNRGMGRSSVP----------VKKTE-----------YTTKIMAKDVIALMDHLG----------------WK 127 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~----------~~~~~-----------~~~~~~~~dl~~~l~~l~----------------~~ 127 (405)
||+|+++|+||||.|... ..... .++.+.+.|+..+...++ ..
T Consensus 476 Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~ 555 (792)
T TIGR03502 476 GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS 555 (792)
T ss_pred CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 999999999999999443 11111 267899999999988886 24
Q ss_pred cEEEEEEChhHHHHHHHHHhCCc-----------ccceEEEeccCC
Q 015550 128 QAHVFGHSMGAMIACKLAAMVPE-----------RVLSLALLNVTG 162 (405)
Q Consensus 128 ~v~lvGhS~Gg~ia~~~a~~~p~-----------~v~~lvl~~~~~ 162 (405)
+++++||||||+++..++..... .+....+.+|.+
T Consensus 556 ~V~~lGHSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgG 601 (792)
T TIGR03502 556 KVSFLGHSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGG 601 (792)
T ss_pred cEEEEecCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCc
Confidence 89999999999999999975322 345666666554
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.8e-12 Score=116.24 Aligned_cols=105 Identities=18% Similarity=0.140 Sum_probs=73.0
Q ss_pred CCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 35 GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 35 ~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
+.|+||++||.+ ++.+.|..++..|+.. .|+.|+.+|+|.......+.. ..+..
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~Vv~vdYrlape~~~p~~--~~D~~ 136 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASY---------------------SGCTVIGIDYTLSPEARFPQA--IEEIV 136 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHH---------------------cCCEEEEecCCCCCCCCCCCc--HHHHH
Confidence 457899999977 5666788888888762 389999999996543322211 11222
Q ss_pred HHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhC------CcccceEEEeccCC
Q 015550 112 IMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTG 162 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~ 162 (405)
+..+.+.+..+.+++ ++++|+|+|+||.+|+.++.+. +.++.+++++.+..
T Consensus 137 ~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 137 AVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 233344444445554 5899999999999999998753 35789999998763
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=111.14 Aligned_cols=128 Identities=25% Similarity=0.362 Sum_probs=106.8
Q ss_pred cccCCEEEEEEEccCC-------CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 20 LNDNGIKIFYRTYGRG-------PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~-------~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
.++.|.+|||...-+. .-|||++|||+|+-..+..+++.|...-+ ++..-+--|.||++.
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~-------------hg~~~d~~FEVI~PS 195 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKR-------------HGNESDYAFEVIAPS 195 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccc-------------cCCccceeEEEeccC
Confidence 6789999999776532 12699999999999999999999987311 111122368999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+||+|.|+.+.. ..++..+.|.-+..++-.+|..++.+-|..||+.|+..+|..+|++|.|+-+-.+.
T Consensus 196 lPGygwSd~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 196 LPGYGWSDAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred CCCcccCcCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 999999998876 58889999999999999999999999999999999999999999999988665443
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-11 Score=101.09 Aligned_cols=176 Identities=22% Similarity=0.283 Sum_probs=117.5
Q ss_pred EEEEEcc-CCCCeEEEEecCC---CCC--CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 27 IFYRTYG-RGPTKVILITGLA---GTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 27 i~y~~~G-~~~p~vvllHG~~---~~~--~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
..|.... +..|..|++|--+ ++. ..-..+++.|.+ .||.++.||+||.|+|.
T Consensus 18 ~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~----------------------~G~atlRfNfRgVG~S~ 75 (210)
T COG2945 18 GRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVK----------------------RGFATLRFNFRGVGRSQ 75 (210)
T ss_pred eccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHh----------------------CCceEEeeccccccccc
Confidence 3344333 3456677787533 222 234456666776 59999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---CCc-c-EEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHL---GWK-Q-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l---~~~-~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
..-.. ... -.+|+.+.++.+ ..+ + ..+.|+|+|++|+..+|.+.|+ ....+.+.+...
T Consensus 76 G~fD~-GiG---E~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~------------ 138 (210)
T COG2945 76 GEFDN-GIG---ELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN------------ 138 (210)
T ss_pred CcccC-Ccc---hHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC------------
Confidence 76542 222 234444444444 222 3 3688999999999999999875 444454444310
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
.....
T Consensus 139 ---------------------------------------------------------------------------~~dfs 143 (210)
T COG2945 139 ---------------------------------------------------------------------------AYDFS 143 (210)
T ss_pred ---------------------------------------------------------------------------chhhh
Confidence 00001
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.+....+|.++|+|+.|.+++....-++++. ...+++.+++ +|++ ..+-+++.+.|.+|+.
T Consensus 144 ~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF-~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 144 FLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFF-HGKLIELRDTIADFLE 205 (210)
T ss_pred hccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCcee-cccHHHHHHHHHHHhh
Confidence 1234458999999999999999888888885 4567777888 8887 4566789999999985
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-11 Score=105.91 Aligned_cols=208 Identities=19% Similarity=0.171 Sum_probs=129.5
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC----CCC--------
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV----PVK-------- 104 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~----~~~-------- 104 (405)
|.||-.||+++....|..+...-.. ||.|+.+|-||.|.|+. ++.
T Consensus 84 P~vV~fhGY~g~~g~~~~~l~wa~~-----------------------Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 84 PAVVQFHGYGGRGGEWHDMLHWAVA-----------------------GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred ceEEEEeeccCCCCCcccccccccc-----------------------ceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 6799999999999988777765554 99999999999998833 111
Q ss_pred -------CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 105 -------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 105 -------~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+..|-......|+..+++.+ ..+++.+.|.|.||.+++..|+..| +|++++++-|....+.-.
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~--- 216 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRA--- 216 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhh---
Confidence 11222223444554444433 4578999999999999999998876 899999887653221100
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
+ .....-....+..++......+...-+... ..
T Consensus 217 -----------i-----------~~~~~~~ydei~~y~k~h~~~e~~v~~TL~-------------------------yf 249 (321)
T COG3458 217 -----------I-----------ELATEGPYDEIQTYFKRHDPKEAEVFETLS-------------------------YF 249 (321)
T ss_pred -----------e-----------eecccCcHHHHHHHHHhcCchHHHHHHHHh-------------------------hh
Confidence 0 000000001111111111100100001010 01
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+.......+++|+|+..|--|.++||..+-..++++...+++.+++- +|.-. |.-..+.+..|++..
T Consensus 250 D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 250 DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 22233467889999999999999999999999999877788888886 87443 334444555666543
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.4e-11 Score=106.34 Aligned_cols=176 Identities=22% Similarity=0.165 Sum_probs=130.5
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC-CCCCCCC-CC---C-----
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-GRSSVPV-KK---T----- 106 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~-G~S~~~~-~~---~----- 106 (405)
|.||++|+..+-....+.+++.|+. +||.|+++|+-+. |.+.... .. .
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~----------------------~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAK----------------------AGYVVLAPDLYGRQGDPTDIEDEPAELETGLVE 85 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHh----------------------CCcEEEechhhccCCCCCcccccHHHHhhhhhc
Confidence 7899999999999999999999988 5999999999763 3332211 00 0
Q ss_pred CCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHH
Q 015550 107 EYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (405)
..+..+...|+.+.++.|. .++|.++|+||||.+++.++...| .|++.|..-+.....
T Consensus 86 ~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~--------------- 149 (236)
T COG0412 86 RVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD--------------- 149 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC---------------
Confidence 1233677788888888772 357999999999999999999987 788888877652100
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (405)
......++
T Consensus 150 ------------------------------------------------------------------------~~~~~~~~ 157 (236)
T COG0412 150 ------------------------------------------------------------------------DTADAPKI 157 (236)
T ss_pred ------------------------------------------------------------------------cccccccc
Confidence 00112467
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-CccccccC-----------HHHHHHHHHHHHHhhc
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHER-----------TEEVNQALIDLIKASE 322 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~e~-----------p~~v~~~i~~fl~~~~ 322 (405)
++|+|+++|+.|..+|......+.+.+. ...++.++++ .|.++-++ .+.-.+.+.+|+++..
T Consensus 158 ~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 158 KVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred cCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999988888887762 2578899998 78776332 2456677788887654
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.4e-11 Score=101.86 Aligned_cols=254 Identities=17% Similarity=0.164 Sum_probs=144.6
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..-..||+.+....+.. .+..+++-.+.+.....|++++..+.+ +||.|+.+|+|
T Consensus 9 ~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~----------------------~Gf~Vlt~dyR 66 (281)
T COG4757 9 HLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAK----------------------AGFEVLTFDYR 66 (281)
T ss_pred ccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhc----------------------cCceEEEEecc
Confidence 34455788777665543 222355555666666778889888887 59999999999
Q ss_pred CCCCCCCCCC-CCCCCHHHHHH-HHHHHHHHhC----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 95 GMGRSSVPVK-KTEYTTKIMAK-DVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 95 G~G~S~~~~~-~~~~~~~~~~~-dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
|.|.|..... +..+.+.|++. |+.+.++.++ -.+.+.+|||+||.+...+.. +| ++.+....++....-..+
T Consensus 67 G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m 144 (281)
T COG4757 67 GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWM 144 (281)
T ss_pred cccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccch
Confidence 9999975543 34577777774 6766666553 358999999999998776654 44 555555554432111001
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
..... ........ ........+....-..+++.. ......+.++......+. +.+. .
T Consensus 145 ~~~~~------l~~~~l~~----lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~----y~fd--------d 202 (281)
T COG4757 145 GLRER------LGAVLLWN----LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPR----YYFD--------D 202 (281)
T ss_pred hhhhc------ccceeecc----ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcc----cccc--------C
Confidence 10000 00000000 000000111111111111111 122233334333322111 0000 0
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeE--EEEcC---C--CccccccCH-HHHHHHHHHHH
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR--MIDLP---G--GHLVSHERT-EEVNQALIDLI 318 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~--l~~~~---g--gH~~~~e~p-~~v~~~i~~fl 318 (405)
.......+....+++||..+...+|..+|+...+.+++-. +|+. ++.++ + ||+-...++ |.+.+.+.+|+
T Consensus 203 p~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 203 PAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 0111234556778899999999999999999999999865 5554 44443 3 899988877 77777776664
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-10 Score=109.63 Aligned_cols=279 Identities=17% Similarity=0.180 Sum_probs=155.1
Q ss_pred cccCCEEEEEEE--cc-CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 20 LNDNGIKIFYRT--YG-RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 20 ~~~~g~~i~y~~--~G-~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+.||+-+.... .+ ..+|+|++.||+.+++..|-...+ +.+++-.|+++||.|+.-+.||-
T Consensus 54 ~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p----------------~~sLaf~LadaGYDVWLgN~RGn 117 (403)
T KOG2624|consen 54 TTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGP----------------EQSLAFLLADAGYDVWLGNNRGN 117 (403)
T ss_pred EccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCc----------------cccHHHHHHHcCCceeeecCcCc
Confidence 455676443322 23 345789999999999999854321 11223344447999999999997
Q ss_pred CCCCC--------CCCCCCCCHHHHHH-HHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc---ccceEEEecc
Q 015550 97 GRSSV--------PVKKTEYTTKIMAK-DVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNV 160 (405)
Q Consensus 97 G~S~~--------~~~~~~~~~~~~~~-dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~ 160 (405)
-.|.. ......+++.+++. |+-+.++++ +.++++.+|||.|+.....++...|+ +|+..++++|
T Consensus 118 ~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 118 TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecc
Confidence 76642 12235678888765 777777765 66799999999999999999988875 7999999999
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHh-----HHHhhhCCCch---------------------
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQE-----YLEEYVGSSTR--------------------- 214 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------------------- 214 (405)
.......... .......+.................... +..........
T Consensus 198 ~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n 272 (403)
T KOG2624|consen 198 AAFPKHIKSL-----LNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWN 272 (403)
T ss_pred hhhhcccccH-----HHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhh
Confidence 8521110000 0000000000000000000000000000 00000000000
Q ss_pred ---------------hHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHH
Q 015550 215 ---------------RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY 279 (405)
Q Consensus 215 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~ 279 (405)
.......+.....+ +....+++....+.... .......-.+..+++||.+.+|++|.++.++.
T Consensus 273 ~~~~~~~~~h~pagtSvk~~~H~~Q~~~s-~~f~~yD~G~~~N~~~Y-~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~D 350 (403)
T KOG2624|consen 273 TTLLPVYLAHLPAGTSVKNIVHWAQIVRS-GKFRKYDYGSKRNLKHY-GQSTPPEYDLTNIKVPTALYYGDNDWLADPED 350 (403)
T ss_pred hcccchhhccCCCCccHHHHHHHHHHhcC-CCccccCCCccccHhhc-CCCCCCCCCccccccCEEEEecCCcccCCHHH
Confidence 00011111111111 11112222221111111 11122233456779999999999999999999
Q ss_pred HHHHHHHhCCCeEEE---EcCC-Cccccc---cCHHHHHHHHHHHHHhhc
Q 015550 280 ARRLAEKLYPVARMI---DLPG-GHLVSH---ERTEEVNQALIDLIKASE 322 (405)
Q Consensus 280 ~~~l~~~l~~~~~l~---~~~g-gH~~~~---e~p~~v~~~i~~fl~~~~ 322 (405)
.+.+...+ +++... .++. .|+=+. +-++++.+.|.+.++...
T Consensus 351 V~~~~~~~-~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 351 VLILLLVL-PNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHhc-ccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 99888876 444332 2677 885553 568999999999998765
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.5e-11 Score=110.28 Aligned_cols=255 Identities=12% Similarity=0.097 Sum_probs=141.7
Q ss_pred CCeEEEEecCCCCCCchh-----hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 36 PTKVILITGLAGTHDAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~-----~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
++|+|++|-+-..-..|+ .++..|.+ +|+.|+.+|+++-..+.......+|-.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~----------------------~g~~vfvIsw~nPd~~~~~~~~edYi~ 164 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLE----------------------QGLDVFVISWRNPDASLAAKNLEDYIL 164 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHH----------------------cCCceEEEeccCchHhhhhccHHHHHH
Confidence 457999999887766654 45666665 699999999998777754332222323
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc-cceEEEeccCCCCCCCCcc--c-hhHHHHHHHHHhhc-
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPK--L-DLQTLSIAIRFFRA- 185 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~- 185 (405)
+.+.+.+..+.+..+.++|.++|||.||+++..+++.++.+ |++++++.+........+. + ....+.....-...
T Consensus 165 e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~ 244 (445)
T COG3243 165 EGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQK 244 (445)
T ss_pred HHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhc
Confidence 34445555666667889999999999999999999988887 9999998876422111110 0 11111111100000
Q ss_pred -cChhhh-----hccCcccccCHhHHHhhhCCC---------------chhHHHHHHHHhhhhhccccCcccchhhhHHh
Q 015550 186 -KTPEKR-----AAVDLDTHYSQEYLEEYVGSS---------------TRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (405)
Q Consensus 186 -~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (405)
..+... ............++..+.... ......+.+|.+.+-..+......
T Consensus 245 g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~-------- 316 (445)
T COG3243 245 GILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGG-------- 316 (445)
T ss_pred cCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccc--------
Confidence 000000 000000011112222222111 112222222222111111000000
Q ss_pred hhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCH-H----H----HHHHHH
Q 015550 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT-E----E----VNQALI 315 (405)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p-~----~----v~~~i~ 315 (405)
.......-.+.+++||++++.|++|.|+|.+......+.+...++++..++||....-+| . . ......
T Consensus 317 ---~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~ 393 (445)
T COG3243 317 ---LEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAE 393 (445)
T ss_pred ---eEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHH
Confidence 000111234688999999999999999999999988887745578888888997765432 1 1 223567
Q ss_pred HHHHhhcC
Q 015550 316 DLIKASEK 323 (405)
Q Consensus 316 ~fl~~~~~ 323 (405)
+|+.+...
T Consensus 394 ~Wl~~a~~ 401 (445)
T COG3243 394 AWLSGAKE 401 (445)
T ss_pred HHHHhhcc
Confidence 77776554
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.9e-10 Score=96.85 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=66.8
Q ss_pred eEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 38 KVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.|+++|||.++..+... +.+.+.+.. ....+.++|++ .+.++..+
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~--------------------~~~~~~~p~l~-------------~~p~~a~~ 47 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHG--------------------PDIQYPCPDLP-------------PFPEEAIA 47 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhC--------------------CCceEECCCCC-------------cCHHHHHH
Confidence 38999999999988654 234444310 14567777654 35666778
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+.++++....+.+.|+|.||||..|..+|.+++ +++ ||+||..
T Consensus 48 ~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 48 QLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 8889999888777999999999999999999985 444 9999873
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.6e-11 Score=100.88 Aligned_cols=209 Identities=19% Similarity=0.143 Sum_probs=133.0
Q ss_pred CCcccccCCccccCCCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCC
Q 015550 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVES 79 (405)
Q Consensus 1 mp~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 79 (405)
||.|....+........+..+++|..-+..-.-..+..||++--..|.... -+..+..++.
T Consensus 4 ~~cc~~~~~~~~~~~~g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~------------------ 65 (242)
T KOG3043|consen 4 MPCCPDGKIAAEVDDGGREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVAL------------------ 65 (242)
T ss_pred CCCCCCcccccccCCCCceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhc------------------
Confidence 566666533333223345566677665544333344356666665554443 5556666665
Q ss_pred CCCCCCeEEEEecCC-CCCCCCC-CCC-----CCCCCHHHHHHHHHHHHHHh---C-CccEEEEEEChhHHHHHHHHHhC
Q 015550 80 GDGGAGIEVCAFDNR-GMGRSSV-PVK-----KTEYTTKIMAKDVIALMDHL---G-WKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 80 ~l~~~g~~Vi~~D~~-G~G~S~~-~~~-----~~~~~~~~~~~dl~~~l~~l---~-~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
.||.|+.+|+- |--.|.. ... ....+..-..+++..+++.+ + .++|.++|.||||.++..+....
T Consensus 66 ----~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~ 141 (242)
T KOG3043|consen 66 ----NGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKD 141 (242)
T ss_pred ----CCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccc
Confidence 49999999975 3111111 000 01223333445555555544 4 57899999999999999988887
Q ss_pred CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhh
Q 015550 149 PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISA 228 (405)
Q Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (405)
| .+.+.+..-|..
T Consensus 142 ~-~f~a~v~~hps~------------------------------------------------------------------ 154 (242)
T KOG3043|consen 142 P-EFDAGVSFHPSF------------------------------------------------------------------ 154 (242)
T ss_pred h-hheeeeEecCCc------------------------------------------------------------------
Confidence 7 677777776651
Q ss_pred ccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC----eEEEEcCC-Ccccc
Q 015550 229 TGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV----ARMIDLPG-GHLVS 303 (405)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~----~~l~~~~g-gH~~~ 303 (405)
...+.+..+++|||++.|+.|.++|++....+.+.+..+ .++.+++| +|-..
T Consensus 155 -----------------------~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 155 -----------------------VDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred -----------------------CChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 012345677899999999999999999988888877332 35889999 99666
Q ss_pred c-----cCH------HHHHHHHHHHHHhh
Q 015550 304 H-----ERT------EEVNQALIDLIKAS 321 (405)
Q Consensus 304 ~-----e~p------~~v~~~i~~fl~~~ 321 (405)
. +.| |+..+.+.+|++..
T Consensus 212 ~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 212 ARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred hhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 3 223 45566667776653
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.3e-12 Score=90.30 Aligned_cols=76 Identities=25% Similarity=0.399 Sum_probs=65.2
Q ss_pred CEEEEEEEccCCC---CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 24 GIKIFYRTYGRGP---TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 24 g~~i~y~~~G~~~---p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
|.+|+|+.+-+.+ .+|+++||++.++..|..+++.|++ +||.|+++|+||||.|.
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~----------------------~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAE----------------------QGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHh----------------------CCCEEEEECCCcCCCCC
Confidence 5789999987633 4799999999999999999999998 59999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMD 122 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~ 122 (405)
.... ..-+++++++|+..+++
T Consensus 59 g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 59 GKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred Cccc-ccCCHHHHHHHHHHHhC
Confidence 6554 35589999999998864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.3e-10 Score=101.16 Aligned_cols=243 Identities=14% Similarity=0.145 Sum_probs=90.3
Q ss_pred EEEEEEEccC-CCCeEEEEecCCCCC---CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CC
Q 015550 25 IKIFYRTYGR-GPTKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GM 96 (405)
Q Consensus 25 ~~i~y~~~G~-~~p~vvllHG~~~~~---~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~ 96 (405)
..+.|...+. .+..||||.|++..- .+...+++.|.+ .+|.|+-+-++ |+
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~----------------------~~wsl~q~~LsSSy~G~ 78 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEE----------------------TGWSLFQVQLSSSYSGW 78 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-----------------------TT-EEEEE--GGGBTTS
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhcc----------------------CCeEEEEEEecCccCCc
Confidence 3444444443 334799999988754 345667777765 39999999875 45
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh--------CCccEEEEEEChhHHHHHHHHHhCC-----cccceEEEeccCCC
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHL--------GWKQAHVFGHSMGAMIACKLAAMVP-----ERVLSLALLNVTGG 163 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l--------~~~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~ 163 (405)
|.+ ++++-++||.++++++ +.++|+|+|||.|+.-++.|+.... ..|++.||-+|...
T Consensus 79 G~~---------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 79 GTS---------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp -S-----------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred Ccc---------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 544 6777777777777755 2468999999999999999988752 56999999999864
Q ss_pred CCCCCccchh-----HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccch
Q 015550 164 GFQCCPKLDL-----QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238 (405)
Q Consensus 164 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (405)
.......... .....+............. ..++...... ..+....++.......
T Consensus 150 REa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l--------p~~~~~~~~~---~~PiTA~Rf~SL~s~~--------- 209 (303)
T PF08538_consen 150 REAILNFLGEREAYEELVALAKELIAEGKGDEIL--------PREFTPLVFY---DTPITAYRFLSLASPG--------- 209 (303)
T ss_dssp TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG------------GGTTT----SS---HHHHHT-S-SS---------
T ss_pred hhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee--------eccccccccC---CCcccHHHHHhccCCC---------
Confidence 3322221111 1112222221111111110 0011111000 0011111222111111
Q ss_pred hhhHHhhhcccChhh-hhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhC---C----CeEEEEcCC-CccccccCH-
Q 015550 239 GQIHACWMHKMTQKD-IQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLY---P----VARMIDLPG-GHLVSHERT- 307 (405)
Q Consensus 239 ~~~~~~~~~~~~~~~-~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~---~----~~~l~~~~g-gH~~~~e~p- 307 (405)
.-..++...+..+. .+.++.+++|+|++.+.+|..+|...- +.+.+++. + ...--+++| +|.+--+..
T Consensus 210 -gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~ 288 (303)
T PF08538_consen 210 -GDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA 288 (303)
T ss_dssp -HHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------------------------------
T ss_pred -CcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccc
Confidence 01112222233333 356788999999999999999997432 33444431 1 112347888 898875433
Q ss_pred ---HHHHHHHHHHHH
Q 015550 308 ---EEVNQALIDLIK 319 (405)
Q Consensus 308 ---~~v~~~i~~fl~ 319 (405)
+.+.+.+..||+
T Consensus 289 ~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 289 EAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------
T ss_pred cccccccccccccCC
Confidence 246777777764
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=7e-11 Score=131.12 Aligned_cols=102 Identities=18% Similarity=0.135 Sum_probs=87.9
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
|.+ ++++|+||++++...|..+.+.|.. ++.|+++|.+|+|.+.. ..+++++
T Consensus 1066 ~~~-~~l~~lh~~~g~~~~~~~l~~~l~~-----------------------~~~v~~~~~~g~~~~~~----~~~~l~~ 1117 (1296)
T PRK10252 1066 GDG-PTLFCFHPASGFAWQFSVLSRYLDP-----------------------QWSIYGIQSPRPDGPMQ----TATSLDE 1117 (1296)
T ss_pred CCC-CCeEEecCCCCchHHHHHHHHhcCC-----------------------CCcEEEEECCCCCCCCC----CCCCHHH
Confidence 444 5699999999999999999999987 89999999999986531 3579999
Q ss_pred HHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHh---CCcccceEEEeccCC
Q 015550 113 MAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTG 162 (405)
Q Consensus 113 ~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 162 (405)
+++++.+.++.+.. .+++++||||||.+|..+|.+ .++++..++++++..
T Consensus 1118 la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1118 VCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999999988754 489999999999999999986 578899999998753
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.1e-10 Score=116.10 Aligned_cols=221 Identities=13% Similarity=0.095 Sum_probs=120.1
Q ss_pred CCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CccEEEEEEChhH
Q 015550 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG--------------------WKQAHVFGHSMGA 138 (405)
Q Consensus 79 ~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~--------------------~~~v~lvGhS~Gg 138 (405)
++++.+||.|+.+|.||+|.|++... .+. .+..+|..++++-+. ..+|.++|.|+||
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 45556799999999999999987543 222 334455555555443 3589999999999
Q ss_pred HHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHH-Hhhh--CCCchh
Q 015550 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL-EEYV--GSSTRR 215 (405)
Q Consensus 139 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~ 215 (405)
.+++.+|...|..++++|..++.......... ...+.... ...... .....+.. .... ......
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~---------~G~~~~~~--g~~ged--~d~l~~~~~~r~~~~~~~~~~ 416 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRE---------NGLVRAPG--GYQGED--LDVLAELTYSRNLLAGDYLRH 416 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhc---------CCceeccC--CcCCcc--hhhHHHHhhhcccCcchhhcc
Confidence 99999999988899999998765321100000 00000000 000000 00000000 0000 000000
Q ss_pred HHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeE
Q 015550 216 AILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVAR 292 (405)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~ 292 (405)
...++.+...+....... ......+|.. .+....+.++++|+|+|||.+|..+++..+.++.+.+. ...+
T Consensus 417 ~~~~~~~~~~~~~~~~~~----~~~y~~fW~~---rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkk 489 (767)
T PRK05371 417 NEACEKLLAELTAAQDRK----TGDYNDFWDD---RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKK 489 (767)
T ss_pred hHHHHHHHhhhhhhhhhc----CCCccHHHHh---CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeE
Confidence 001111111000000000 0011122322 23345567889999999999999999888888877762 3567
Q ss_pred EEEcCCCcccccc-CHHHHHHHHHHHHHhhc
Q 015550 293 MIDLPGGHLVSHE-RTEEVNQALIDLIKASE 322 (405)
Q Consensus 293 l~~~~ggH~~~~e-~p~~v~~~i~~fl~~~~ 322 (405)
+++.+++|..... .+.++.+.+.+|++...
T Consensus 490 L~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 490 LFLHQGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred EEEeCCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 7776779965433 45566777777776553
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.8e-10 Score=114.19 Aligned_cols=209 Identities=17% Similarity=0.136 Sum_probs=127.4
Q ss_pred cccCCEEEEE-EEcc------CCCCeEEEEecCCCCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFY-RTYG------RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y-~~~G------~~~p~vvllHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+.||.+|.+ ..+. ...|+||++||..+... .|.+....|.. +||.|+.
T Consensus 422 ~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~----------------------rG~~v~~ 479 (686)
T PRK10115 422 TARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD----------------------RGFVYAI 479 (686)
T ss_pred ECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH----------------------CCcEEEE
Confidence 4578888775 3331 13478999999877663 36666666666 4999999
Q ss_pred ecCCCCCCCCC---CC---CCCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 91 FDNRGMGRSSV---PV---KKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 91 ~D~~G~G~S~~---~~---~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+.||-|.-.. .. .....+++|+++.+..+++.= ..+++.+.|.|.||.++..++.++|++++++|...+..
T Consensus 480 ~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 480 VHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred EEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 99998654421 11 111245666665555555431 23589999999999999999999999999999988763
Q ss_pred CCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhH
Q 015550 163 GGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (405)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
.. ..++.... .........++ +..... . ..+++..
T Consensus 560 D~---------------~~~~~~~~----------~p~~~~~~~e~-G~p~~~-~-~~~~l~~----------------- 594 (686)
T PRK10115 560 DV---------------VTTMLDES----------IPLTTGEFEEW-GNPQDP-Q-YYEYMKS----------------- 594 (686)
T ss_pred hH---------------hhhcccCC----------CCCChhHHHHh-CCCCCH-H-HHHHHHH-----------------
Confidence 11 00100000 00000011111 111111 0 1111111
Q ss_pred HhhhcccChhhhhhhhhcCCc-EEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEc---CC-Ccccc
Q 015550 243 ACWMHKMTQKDIQTIRSAGFL-VSVIHGRHDVIAQICYARRLAEKL---YPVARMIDL---PG-GHLVS 303 (405)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~P-vlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~---~g-gH~~~ 303 (405)
...+..+.+++.| +|+++|.+|.-||+..+.+++.++ ....+++++ ++ ||...
T Consensus 595 --------~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 595 --------YSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred --------cCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 1223344566789 667799999999999999998887 234566666 66 99843
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.4e-09 Score=90.74 Aligned_cols=216 Identities=19% Similarity=0.281 Sum_probs=116.1
Q ss_pred CCEEEEEEEccC------CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 23 ~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
+|.+|+.++.-| ..++||+.+||+-..+.|..++.+|+. .||+|+.+|.-.|
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~----------------------NGFhViRyDsl~H 68 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSA----------------------NGFHVIRYDSLNH 68 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHT----------------------TT--EEEE---B-
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhh----------------------CCeEEEecccccc
Confidence 688888877754 236899999999999999999999998 4999999999877
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 97 -GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 97 -G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
|.|++... ++++....+++..+++.+ |..++.|+.-|+.|-+|+..|.+. .+.-||+.-+.. .-
T Consensus 69 vGlSsG~I~--eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV--------nl 136 (294)
T PF02273_consen 69 VGLSSGDIN--EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV--------NL 136 (294)
T ss_dssp --------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S---------H
T ss_pred ccCCCCChh--hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee--------eH
Confidence 88887664 889999999998888776 677899999999999999999854 477777665442 12
Q ss_pred hHHHHHHHHH--hhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc-
Q 015550 173 LQTLSIAIRF--FRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM- 249 (405)
Q Consensus 173 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (405)
+.++.....+ +...........++. +.....+.+.+. |....+
T Consensus 137 r~TLe~al~~Dyl~~~i~~lp~dldfe------------Gh~l~~~vFv~d----------------------c~e~~w~ 182 (294)
T PF02273_consen 137 RDTLEKALGYDYLQLPIEQLPEDLDFE------------GHNLGAEVFVTD----------------------CFEHGWD 182 (294)
T ss_dssp HHHHHHHHSS-GGGS-GGG--SEEEET------------TEEEEHHHHHHH----------------------HHHTT-S
T ss_pred HHHHHHHhccchhhcchhhCCCccccc------------ccccchHHHHHH----------------------HHHcCCc
Confidence 2222222111 100000000000000 000111111111 111111
Q ss_pred -ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-CccccccCH
Q 015550 250 -TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERT 307 (405)
Q Consensus 250 -~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e~p 307 (405)
.......++.+.+|++.+++++|.++......++...+ .+.++++.++| +|-+. |++
T Consensus 183 ~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 183 DLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp SHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred cchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 12334567788999999999999999998888888766 35688999999 89874 444
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.1e-09 Score=103.75 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=83.1
Q ss_pred CEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC-CCC
Q 015550 24 GIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-GMG 97 (405)
Q Consensus 24 g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-G~G 97 (405)
+.+++|.-... ..|.||+++|.+|++..+..+.+ ...-. .+.|...... -..---+..+++.+|.| |+|
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E-~GP~~--i~~~~~~~~~--n~~sW~~~~~~l~iDqP~G~G 134 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAE-NGPCL--MNETTGDIYN--NTYSWNNEAYVIYVDQPAGVG 134 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhcc-CCCeE--EeCCCCceeE--CCcccccccCeEEEeCCCCcC
Confidence 46777765552 45789999999998876533321 10000 0000000000 00000125689999975 899
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhC----------CcccceEEEecc
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV----------PERVLSLALLNV 160 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~----------p~~v~~lvl~~~ 160 (405)
.|.........+.++.++|+.++++.+ +..+++|+||||||.++..+|... +-.++++++.++
T Consensus 135 ~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 135 FSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 886544323456688899999888843 447899999999999998887652 123688888887
Q ss_pred CC
Q 015550 161 TG 162 (405)
Q Consensus 161 ~~ 162 (405)
..
T Consensus 215 ~~ 216 (462)
T PTZ00472 215 LT 216 (462)
T ss_pred cc
Confidence 64
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-09 Score=95.85 Aligned_cols=100 Identities=22% Similarity=0.265 Sum_probs=85.3
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
|+|+++|+.+|....|.++...|.. ...|+.++.||.|.-... .-+++++++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-----------------------~~~v~~l~a~g~~~~~~~----~~~l~~~a~~ 53 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-----------------------LLPVYGLQAPGYGAGEQP----FASLDDMAAA 53 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-----------------------CceeeccccCcccccccc----cCCHHHHHHH
Confidence 4699999999999999999999987 799999999999863322 4589999998
Q ss_pred HHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhC---CcccceEEEeccCCC
Q 015550 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGG 163 (405)
Q Consensus 117 l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 163 (405)
..+.|..... .+++|+|||+||.+|...|.+- .+.|..|+++++...
T Consensus 54 yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 54 YVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 8888887754 5999999999999999999763 346999999998854
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-09 Score=100.06 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=56.5
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEe
Q 015550 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 158 (405)
+||.|+.+|.||.|.|...... . ....++|..++|+-+ .+ .+|.++|.|++|..++.+|...|..+++++..
T Consensus 56 ~GY~vV~~D~RG~g~S~G~~~~--~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~ 132 (272)
T PF02129_consen 56 RGYAVVVQDVRGTGGSEGEFDP--M-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQ 132 (272)
T ss_dssp TT-EEEEEE-TTSTTS-S-B-T--T-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEE
T ss_pred CCCEEEEECCcccccCCCcccc--C-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEec
Confidence 5999999999999999876542 1 344555555555544 44 48999999999999999999888899999998
Q ss_pred ccCCCCCC
Q 015550 159 NVTGGGFQ 166 (405)
Q Consensus 159 ~~~~~~~~ 166 (405)
.+....+.
T Consensus 133 ~~~~d~~~ 140 (272)
T PF02129_consen 133 SGWSDLYR 140 (272)
T ss_dssp SE-SBTCC
T ss_pred ccCCcccc
Confidence 87654443
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-09 Score=89.03 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=97.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc
Q 015550 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (405)
.-..+++++.+.+.+... .++++||+||+|+..++.++.+....|.|+.|++|+-.... ...
T Consensus 40 ~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~---~~~-------------- 101 (181)
T COG3545 40 APVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP---EIR-------------- 101 (181)
T ss_pred CCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc---ccc--------------
Confidence 346888888888888877 46799999999999999999988779999999998721100 000
Q ss_pred ChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEE
Q 015550 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (405)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlv 266 (405)
...... +.... ...+..|.++
T Consensus 102 ---------------------------------~~~~~t-----------------------f~~~p---~~~lpfps~v 122 (181)
T COG3545 102 ---------------------------------PKHLMT-----------------------FDPIP---REPLPFPSVV 122 (181)
T ss_pred ---------------------------------hhhccc-----------------------cCCCc---cccCCCceeE
Confidence 000000 00011 1234579999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc---CHHHHHHHHHHHHHhh
Q 015550 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE---RTEEVNQALIDLIKAS 321 (405)
Q Consensus 267 i~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e---~p~~v~~~i~~fl~~~ 321 (405)
++.++|++++++.++.+++.+ .+.++.+.. ||+.-.+ ...+....+.+|+.+.
T Consensus 123 vaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 123 VASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred EEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 999999999999999999987 456776664 9977543 5667777888877654
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-09 Score=86.45 Aligned_cols=183 Identities=17% Similarity=0.165 Sum_probs=125.4
Q ss_pred cCCCCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC----CCCCCC
Q 015550 33 GRGPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS----VPVKKT 106 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~----~~~~~~ 106 (405)
|+.+-+||+-||.+.+.++ ....+..|+. +|+.|..|+++-+-... .|+...
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~----------------------~G~~vaRfefpYma~Rrtg~rkPp~~~ 68 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALAR----------------------RGWLVARFEFPYMAARRTGRRKPPPGS 68 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHh----------------------CceeEEEeecchhhhccccCCCCcCcc
Confidence 4444479999999988765 5667788887 59999999998653221 122222
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc
Q 015550 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (405)
..-..++...+.++...+...+.++-|+||||-++.++|..-...|++|++++-+.- | ..
T Consensus 69 ~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh-----p---------------pG 128 (213)
T COG3571 69 GTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH-----P---------------PG 128 (213)
T ss_pred ccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC-----C---------------CC
Confidence 333456778888888888777999999999999999998876666999999984410 0 00
Q ss_pred ChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEE
Q 015550 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (405)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlv 266 (405)
.+ .....+.+..+++|+||
T Consensus 129 KP-------------------------------------------------------------e~~Rt~HL~gl~tPtli 147 (213)
T COG3571 129 KP-------------------------------------------------------------EQLRTEHLTGLKTPTLI 147 (213)
T ss_pred Cc-------------------------------------------------------------ccchhhhccCCCCCeEE
Confidence 00 00011345667899999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc----------CHHHHHHHHHHHHHh
Q 015550 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE----------RTEEVNQALIDLIKA 320 (405)
Q Consensus 267 i~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e----------~p~~v~~~i~~fl~~ 320 (405)
.+|+.|.+-..+.....+ +.+..+++++.+ .|.+--. +-...++.|..|+..
T Consensus 148 ~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 148 TQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred eecccccccCHHHHHhhh--cCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999999998876653333 357789999987 7865321 223455666666654
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.2e-10 Score=100.58 Aligned_cols=169 Identities=18% Similarity=0.149 Sum_probs=90.6
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC-----CCCC--------
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG-----RSSV-------- 101 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G-----~S~~-------- 101 (405)
.++.|||+||++.+...++.+...|.+.+. +.++..+.+|-|--- -...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~------------------~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~ 64 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALK------------------KLDFEFVFVDGPHEVPPGPGIEPFSSEAESAF 64 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHH------------------HTT-EEEEE--SEE---GGG-SS---HHHHHH
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHh------------------hCcEEEEEecCCcccCCccccccccccccccc
Confidence 356799999999999998877766655211 016777777754221 1100
Q ss_pred ----CC------C---CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC--------cccceEEEecc
Q 015550 102 ----PV------K---KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP--------ERVLSLALLNV 160 (405)
Q Consensus 102 ----~~------~---~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p--------~~v~~lvl~~~ 160 (405)
+. . .....+++..+.+.+.++..|. -..|+|+|+||.+|..++.... ..++-+|++++
T Consensus 65 ~~~~~~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg 143 (212)
T PF03959_consen 65 GDPGPFYSWWDPDDDDHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISG 143 (212)
T ss_dssp HHTT--EESS---S-SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES-
T ss_pred CCCCcceeeeecCCCcccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcc
Confidence 00 0 0122355566666666666652 3579999999999998886421 24788888887
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
..+... . +
T Consensus 144 ~~p~~~------~------------------------------------------------~------------------ 151 (212)
T PF03959_consen 144 FPPPDP------D------------------------------------------------Y------------------ 151 (212)
T ss_dssp ---EEE-------------------------------------------------------G------------------
T ss_pred cCCCch------h------------------------------------------------h------------------
Confidence 631000 0 0
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC-eEEEEcCCCccccccC
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPGGHLVSHER 306 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~-~~l~~~~ggH~~~~e~ 306 (405)
.... .-..+++|+|.|+|++|.+++++..+.+++.+ .+ .+++..+|||.+....
T Consensus 152 ----------~~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~gGH~vP~~~ 206 (212)
T PF03959_consen 152 ----------QELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMF-DPDARVIEHDGGHHVPRKK 206 (212)
T ss_dssp ----------TTTT---TT---EEEEEEETT-SSS-HHHHHHHHHHH-HHHEEEEEESSSSS----H
T ss_pred ----------hhhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhc-cCCcEEEEECCCCcCcCCh
Confidence 0000 12456799999999999999999999999987 45 8888889999887653
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.5e-09 Score=95.45 Aligned_cols=235 Identities=15% Similarity=0.135 Sum_probs=126.3
Q ss_pred CCCeEEEEecCCCCCCchh-hh-HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC--CCCCH
Q 015550 35 GPTKVILITGLAGTHDAWG-PQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTT 110 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~-~~-~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~--~~~~~ 110 (405)
.+|.+|.++|.|.+....+ .+ +..|.+ +|+..+.+..|-||.-.+.... .-.++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~----------------------~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLK----------------------EGIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHH----------------------cCcceEEEecccccccChhHhhcccccch
Confidence 3566777888777443322 22 455555 4999999999999976543221 11122
Q ss_pred HHH----------HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh--HHHHH
Q 015550 111 KIM----------AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL--QTLSI 178 (405)
Q Consensus 111 ~~~----------~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~ 178 (405)
.|+ +..+..+++..|..++.+.|.||||.+|...|...|..|..+-.+++......-....-. ..+..
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~ 228 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDA 228 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHH
Confidence 221 223344445558889999999999999999999999888777777765321110000000 00111
Q ss_pred HHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhh
Q 015550 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (405)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (405)
+...+........ ................ .......+..+..... .+....+.
T Consensus 229 L~~q~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~Ea~~~m~~~-------------------------md~~T~l~ 281 (348)
T PF09752_consen 229 LEKQFEDTVYEEE-ISDIPAQNKSLPLDSM-EERRRDREALRFMRGV-------------------------MDSFTHLT 281 (348)
T ss_pred HHHHhcccchhhh-hcccccCcccccchhh-ccccchHHHHHHHHHH-------------------------HHhhcccc
Confidence 1111000000000 0000000000000000 0000000000000000 01111122
Q ss_pred hcC-----CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCcccc-ccCHHHHHHHHHHHHH
Q 015550 259 SAG-----FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVS-HERTEEVNQALIDLIK 319 (405)
Q Consensus 259 ~i~-----~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~-~e~p~~v~~~i~~fl~ 319 (405)
+.. -.+.++.+++|..+|......|.+.. |+++++.++|||... +-+.+.+.++|.+-++
T Consensus 282 nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W-PGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 282 NFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW-PGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred ccCCCCCCCcEEEEEecCceEechhhcchHHHhC-CCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 222 34889999999999998888999876 999999999999554 4577888888888664
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.08 E-value=9e-09 Score=91.90 Aligned_cols=207 Identities=20% Similarity=0.238 Sum_probs=118.0
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhc-CCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC----CCCC----CCC---
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSS----VPV--- 103 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~----G~S~----~~~--- 103 (405)
..|.||+||++++...+..++..+. +... ....=++.++.-|. |.=. .|-
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~------------------~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV 72 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGV------------------AQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQV 72 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-------------------S-EEEEEEETTSEEEEES---TT-SS-EEEE
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCC------------------CceEEEEEECCCCeEEEeeecCCCCCCCEEEE
Confidence 3469999999999999999999997 5211 01222344444443 2211 110
Q ss_pred --CCCC-CCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccCCCCCCCCccc
Q 015550 104 --KKTE-YTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 104 --~~~~-~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~ 171 (405)
.... -+....++.+..++..| +++++.+|||||||+.+..++..+.. ++.++|.|+++..+.......
T Consensus 73 ~F~~n~~~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~ 152 (255)
T PF06028_consen 73 NFEDNRNANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDD 152 (255)
T ss_dssp EESSTT-CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-
T ss_pred EecCCCcCCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccccccc
Confidence 0011 35777888888888776 67899999999999999999887532 589999999875433211100
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
... . .+.. -+ .......++.+....
T Consensus 153 ~~~-----------------~-----------~~~~-~g-p~~~~~~y~~l~~~~------------------------- 177 (255)
T PF06028_consen 153 QNQ-----------------N-----------DLNK-NG-PKSMTPMYQDLLKNR------------------------- 177 (255)
T ss_dssp TTT-----------------T------------CST-T--BSS--HHHHHHHHTH-------------------------
T ss_pred chh-----------------h-----------hhcc-cC-CcccCHHHHHHHHHH-------------------------
Confidence 000 0 0000 00 011111222222110
Q ss_pred hhhhhhhhcCCcEEEEeec------CCccCCHHHHHHHHHHhCC---CeEEEEcCC---CccccccCHHHHHHHHHHHHH
Q 015550 252 KDIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYP---VARMIDLPG---GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~------~D~~~~~~~~~~l~~~l~~---~~~l~~~~g---gH~~~~e~p~~v~~~i~~fl~ 319 (405)
...+ .-++.||-|.|. .|..+|...+..+..-+.+ ..+-.++.| .|.-.+|++ +|.+.|.+||-
T Consensus 178 --~~~~-p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 178 --RKNF-PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp --GGGS-TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred --HhhC-CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 0011 124679999998 8999999888777665533 344455554 588888877 78899999983
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.7e-09 Score=89.21 Aligned_cols=95 Identities=26% Similarity=0.321 Sum_probs=73.8
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (405)
.+||+-|=++-...=..+++.|.+ +|+.|+.+|-+-+=.+ .-+.++.+.|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~----------------------~G~~VvGvdsl~Yfw~-------~rtP~~~a~Dl 54 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAK----------------------QGVPVVGVDSLRYFWS-------ERTPEQTAADL 54 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHH----------------------CCCeEEEechHHHHhh-------hCCHHHHHHHH
Confidence 577888877655444566777877 5999999997644333 34677888888
Q ss_pred HHHHHHh----CCccEEEEEEChhHHHHHHHHHhCC----cccceEEEeccC
Q 015550 118 IALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVT 161 (405)
Q Consensus 118 ~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~ 161 (405)
..++++. +.++++|+|+|+|+-+.-....+.| ++|..++|+++.
T Consensus 55 ~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 55 ARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 8888765 6679999999999988888877776 479999999986
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-08 Score=104.78 Aligned_cols=220 Identities=17% Similarity=0.212 Sum_probs=140.4
Q ss_pred cccccCCEEEEEEEccC-------CCCeEEEEecCCCCCC-------chhhhHhhhcCCCCCCCCchhhhccccCCCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-------GPTKVILITGLAGTHD-------AWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-------~~p~vvllHG~~~~~~-------~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
..+..+|...++...-+ .-|.||.+||.+++.. .|..+ ....
T Consensus 501 ~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~---------------------- 556 (755)
T KOG2100|consen 501 GKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSS---------------------- 556 (755)
T ss_pred EEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhcc----------------------
Confidence 34556888888876654 2267788889886332 23333 2333
Q ss_pred CCeEEEEecCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
.|+.|+.+|.||-|..... ..-.....+++...+..+++.. +.+++.++|+|+||.+++..+...|+.+-++
T Consensus 557 ~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkc 636 (755)
T KOG2100|consen 557 RGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKC 636 (755)
T ss_pred CCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEE
Confidence 4999999999998766422 1112346666666666666654 4468999999999999999999998665555
Q ss_pred -EEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCc
Q 015550 156 -ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 156 -vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
|.++|..... .+...+.+++++........+++
T Consensus 637 gvavaPVtd~~---------------------------------~yds~~terymg~p~~~~~~y~e------------- 670 (755)
T KOG2100|consen 637 GVAVAPVTDWL---------------------------------YYDSTYTERYMGLPSENDKGYEE------------- 670 (755)
T ss_pred EEEecceeeee---------------------------------eecccccHhhcCCCccccchhhh-------------
Confidence 9999873110 01111111111111111111111
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcE-EEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-CccccccCH-H
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLV-SVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERT-E 308 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-lvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~e~p-~ 308 (405)
......+..++.|. |++||+.|.-++.+.+..+.+.|. -..++.++|+ +|.+..-.. .
T Consensus 671 ----------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~ 734 (755)
T KOG2100|consen 671 ----------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVIS 734 (755)
T ss_pred ----------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchH
Confidence 01112233444455 999999999999999998888772 2378999998 999877543 6
Q ss_pred HHHHHHHHHHHhhcC
Q 015550 309 EVNQALIDLIKASEK 323 (405)
Q Consensus 309 ~v~~~i~~fl~~~~~ 323 (405)
.+...+..|+..+-.
T Consensus 735 ~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 735 HLYEKLDRFLRDCFG 749 (755)
T ss_pred HHHHHHHHHHHHHcC
Confidence 788889999986554
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.1e-09 Score=94.95 Aligned_cols=102 Identities=20% Similarity=0.196 Sum_probs=72.6
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
=|+|||+||+......|..++++++.+ ||-|+++|+...+...... ...+..++++
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvASh----------------------GyIVV~~d~~~~~~~~~~~--~~~~~~~vi~ 72 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASH----------------------GYIVVAPDLYSIGGPDDTD--EVASAAEVID 72 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhC----------------------ceEEEEecccccCCCCcch--hHHHHHHHHH
Confidence 378999999997777788999999984 9999999976644321111 0112223333
Q ss_pred HHHHHHH-Hh------CCccEEEEEEChhHHHHHHHHHhC-----CcccceEEEeccC
Q 015550 116 DVIALMD-HL------GWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVT 161 (405)
Q Consensus 116 dl~~~l~-~l------~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~ 161 (405)
.+.+-++ .+ +..++.|.|||-||-+|..++..+ +.+++++++++|.
T Consensus 73 Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 73 WLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred HHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 3322111 11 345899999999999999999887 5689999999987
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-08 Score=89.79 Aligned_cols=93 Identities=22% Similarity=0.228 Sum_probs=59.7
Q ss_pred EEEEecCCCC---CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 39 VILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 39 vvllHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
||++||.+-. .+....++..++.. .|+.|+.+|+|=.-. ..+.+..+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~~Yrl~p~---------~~~p~~~~ 50 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE---------------------RGFVVVSIDYRLAPE---------APFPAALE 50 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH---------------------HTSEEEEEE---TTT---------SSTTHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh---------------------ccEEEEEeecccccc---------cccccccc
Confidence 7899998754 34445566666531 399999999994321 23333444
Q ss_pred HHHHH----HHH-----hCCccEEEEEEChhHHHHHHHHHhCCc----ccceEEEeccC
Q 015550 116 DVIAL----MDH-----LGWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (405)
Q Consensus 116 dl~~~----l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~ 161 (405)
|+.+. +++ .+.++++|+|+|.||.+|+.++.+..+ .++++++++|.
T Consensus 51 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 51 DVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 44443 444 334689999999999999999986443 38999999985
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.3e-08 Score=86.33 Aligned_cols=62 Identities=26% Similarity=0.396 Sum_probs=50.6
Q ss_pred hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhc
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+.+++|.|-|.|+.|.++|......|++.+ +++.+...+|||++.-.. ...+.|.+||....
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHPGGHIVPNKA--KYKEKIADFIQSFL 221 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecCCCccCCCch--HHHHHHHHHHHHHH
Confidence 567899999999999999999999999987 888787778999997664 45556666665544
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.7e-08 Score=86.81 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=68.5
Q ss_pred CCeEEEEecCCCCCCchhhh--HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC------C-CCCC
Q 015550 36 PTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV------P-VKKT 106 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~------~-~~~~ 106 (405)
.|.||++||.+.+.+.+... +..|++. .||-|+.++......... . ....
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~---------------------~GfivvyP~~~~~~~~~~cw~w~~~~~~~g 74 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADR---------------------EGFIVVYPEQSRRANPQGCWNWFSDDQQRG 74 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhc---------------------CCeEEEcccccccCCCCCcccccccccccC
Confidence 47899999999988765432 2345543 489999988542111100 0 0000
Q ss_pred CCCHHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 107 EYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.-+...++..+..+..+.+ ..+|++.|+|.||+++..++..+||.+.++..+++..
T Consensus 75 ~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 75 GGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred ccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 1122223333334444444 4589999999999999999999999999999888763
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.2e-08 Score=85.88 Aligned_cols=256 Identities=13% Similarity=0.103 Sum_probs=139.6
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC---CC----CCCC
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS---VP----VKKT 106 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~---~~----~~~~ 106 (405)
..++.+++++|.+|....|.++++.|...+. +.+.|+.+-..||-.-+ .. ....
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~-------------------~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e 87 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLI-------------------DRLPVWTISHAGHALMPASLREDHSHTNEE 87 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcc-------------------cccceeEEeccccccCCccccccccccccc
Confidence 3567789999999999999999988876322 14668998888886543 11 1124
Q ss_pred CCCHHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCCCCCCCCccchhHHHHHHHHH
Q 015550 107 EYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (405)
.+++++.++.-.++++..- -.+++++|||-|+++.+....... -.|.+.+++=|+.......|.-.. +......
T Consensus 88 ifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~--~t~~l~~ 165 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIR--LTKVLRY 165 (301)
T ss_pred ccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceE--eeeeeee
Confidence 6789999998888888763 358999999999999999887432 247888888766321111110000 0000000
Q ss_pred hhccChhhhhccCcccccCHhHHHhh----h-CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh
Q 015550 183 FRAKTPEKRAAVDLDTHYSQEYLEEY----V-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (405)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (405)
+.. ...........+.+.++..+ . .......+....-.......-......+.++-.. .......+.+
T Consensus 166 ~~h---v~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~----eV~~~d~e~~ 238 (301)
T KOG3975|consen 166 LPH---VVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEME----EVTTRDIEYC 238 (301)
T ss_pred ehh---hhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHH----HHHHhHHHHH
Confidence 000 00000000000111111111 0 0000000000000000000000000000000000 0111223445
Q ss_pred hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEc-CC-CccccccCHHHHHHHHHHHH
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL-PG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~-~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.+-.+-+.+.+|..|.++|.++...+.+.+ |..++..- +. -|.+...+.+.+++.+.+.+
T Consensus 239 een~d~l~Fyygt~DgW~p~~~~d~~kdd~-~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 239 EENLDSLWFYYGTNDGWVPSHYYDYYKDDV-PEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HhcCcEEEEEccCCCCCcchHHHHHHhhhc-chhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 555688999999999999999999999987 54444332 44 89999999999998888765
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-08 Score=90.10 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=71.1
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH-
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA- 114 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~- 114 (405)
+.+||||||++++...++.+...+.+.. ........++++++|+......-. ...+.+.+
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~--------------~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~ 64 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKA--------------LLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAE 64 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhh--------------hhccCccceeEEEeccCccccccc-----cccHHHHHH
Confidence 3469999999999888877776653210 001111368999999876532221 11222333
Q ss_pred ---HHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCC
Q 015550 115 ---KDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGG 163 (405)
Q Consensus 115 ---~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 163 (405)
+.+..+++.. +.+++++|||||||.+|-.++...+ +.|+.+|.++++..
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 3333444444 4578999999999999988876543 57999999998753
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.6e-08 Score=88.40 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=72.2
Q ss_pred EEecCC--CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015550 41 LITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (405)
Q Consensus 41 llHG~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (405)
++|+.+ ++...|.++...|.. .+.|+++|.+|++.+... ..+.+.+++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~g~~~~~~~----~~~~~~~~~~~~ 54 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-----------------------RRDVSALPLPGFGPGEPL----PASADALVEAQA 54 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-----------------------CccEEEecCCCCCCCCCC----CCCHHHHHHHHH
Confidence 455544 566779999999887 799999999999876543 236777777665
Q ss_pred HHHH-HhCCccEEEEEEChhHHHHHHHHHh---CCcccceEEEeccCC
Q 015550 119 ALMD-HLGWKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTG 162 (405)
Q Consensus 119 ~~l~-~l~~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 162 (405)
..+. ..+..+++++|||+||.++..++.. .++.+.+++++++..
T Consensus 55 ~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 55 EAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 5444 3445789999999999999998886 456799999998754
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.7e-07 Score=76.28 Aligned_cols=53 Identities=9% Similarity=-0.094 Sum_probs=37.1
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCe-EEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVA-RMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~-~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+++..+.|.+.+...+.+... ++ ++++.+||++-+ +.-++....|.+|++.
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y~----~~y~~~v~~GGdH~f-~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEELH----PYYEIVWDEEQTHKF-KNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHhc----cCceEEEECCCCCCC-CCHHHHHHHHHHHHhc
Confidence 36899999999998766554443 33 678888854332 5556788888888853
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.1e-08 Score=80.83 Aligned_cols=150 Identities=19% Similarity=0.141 Sum_probs=92.0
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHh-CCccEEEEEEChhHHHHHHHHHh-CCcccceEEE
Q 015550 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALM----DHL-GWKQAHVFGHSMGAMIACKLAAM-VPERVLSLAL 157 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l----~~l-~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl 157 (405)
.||+|..+++ +.+. ...++++...++...+ +.. ..+.+.+-|||.|+.+|..+..+ +..+|.++++
T Consensus 96 ~gY~vasvgY---~l~~-----q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l 167 (270)
T KOG4627|consen 96 RGYRVASVGY---NLCP-----QVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLIL 167 (270)
T ss_pred cCeEEEEecc---CcCc-----ccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHH
Confidence 3999999865 3442 1335555555444443 333 33567777899999999988766 3448999999
Q ss_pred eccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccc
Q 015550 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (405)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (405)
+++.. .. +-+..... . ..++-.. +-.
T Consensus 168 ~~GvY---------~l-------~EL~~te~----------------g-~dlgLt~-------~~a-------------- 193 (270)
T KOG4627|consen 168 LCGVY---------DL-------RELSNTES----------------G-NDLGLTE-------RNA-------------- 193 (270)
T ss_pred HhhHh---------hH-------HHHhCCcc----------------c-cccCccc-------chh--------------
Confidence 88651 00 00000000 0 0000000 000
Q ss_pred hhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccC
Q 015550 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHER 306 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~ 306 (405)
....-.+..+..+++|+|++.|++|.---.+..+.++..+ ..+++..+++ +|+-.+++
T Consensus 194 ----------e~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 194 ----------ESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-RKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ----------hhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-hhcceeecCCcchhhHHHH
Confidence 0011123445678899999999999866678889999887 7799999999 99877664
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.9e-08 Score=95.67 Aligned_cols=102 Identities=21% Similarity=0.275 Sum_probs=59.5
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC-CCC-CC----------
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVP-VK---------- 104 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S-~~~-~~---------- 104 (405)
|+|||-||++++...|..++..|+. +||-|+++|+|-.-.+ ... ..
T Consensus 101 PvvIFSHGlgg~R~~yS~~~~eLAS----------------------~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~ 158 (379)
T PF03403_consen 101 PVVIFSHGLGGSRTSYSAICGELAS----------------------HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYV 158 (379)
T ss_dssp EEEEEE--TT--TTTTHHHHHHHHH----------------------TT-EEEEE---SS-SSEEEE-SSHHHHHHT---
T ss_pred CEEEEeCCCCcchhhHHHHHHHHHh----------------------CCeEEEEeccCCCceeEEEeccCCCcccccccc
Confidence 7899999999999999999999998 5999999999953211 000 00
Q ss_pred ----C------CCC----C-------HHHHHHHHHHHHHHh--------------------------CCccEEEEEEChh
Q 015550 105 ----K------TEY----T-------TKIMAKDVIALMDHL--------------------------GWKQAHVFGHSMG 137 (405)
Q Consensus 105 ----~------~~~----~-------~~~~~~dl~~~l~~l--------------------------~~~~v~lvGhS~G 137 (405)
. ... . ++.-++++..+++.+ +..++.++|||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFG 238 (379)
T PF03403_consen 159 VEYLEEEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFG 238 (379)
T ss_dssp ------EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHH
T ss_pred ccccccceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCch
Confidence 0 000 0 111223444444322 2347999999999
Q ss_pred HHHHHHHHHhCCcccceEEEeccC
Q 015550 138 AMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 138 g~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
|..++..+... .+++..|++++.
T Consensus 239 GATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 239 GATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp HHHHHHHHHH--TT--EEEEES--
T ss_pred HHHHHHHHhhc-cCcceEEEeCCc
Confidence 99999988776 689999999976
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=5e-07 Score=84.47 Aligned_cols=100 Identities=20% Similarity=0.126 Sum_probs=66.3
Q ss_pred CCeEEEEecCCCC---CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 36 PTKVILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 36 ~p~vvllHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.|+||++||.+-. .+.....+..+... .|+.|+.+|+|-.-+-. ....+++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~---------------------~g~~vv~vdYrlaPe~~-----~p~~~~d 132 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAA---------------------AGAVVVSVDYRLAPEHP-----FPAALED 132 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHH---------------------cCCEEEecCCCCCCCCC-----CCchHHH
Confidence 5789999998643 34443445444432 49999999998543322 2334444
Q ss_pred HHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhCCc----ccceEEEeccC
Q 015550 113 MAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (405)
Q Consensus 113 ~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~ 161 (405)
..+.+..+.++ ++ .+++.++|+|.||.+++.++..-.+ .....+++.|.
T Consensus 133 ~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 133 AYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 33333333333 33 4689999999999999999987544 46788888876
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=98.11 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=72.5
Q ss_pred CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 015550 47 GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW 126 (405)
Q Consensus 47 ~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~ 126 (405)
.....|..+++.|.+ .||.+ ..|++|+|.+.+.........+++.+.+.++.++.+.
T Consensus 105 ~~~~~~~~li~~L~~----------------------~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~ 161 (440)
T PLN02733 105 DEVYYFHDMIEQLIK----------------------WGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG 161 (440)
T ss_pred chHHHHHHHHHHHHH----------------------cCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC
Confidence 455789999999998 48755 8999999998765421122344555555555566677
Q ss_pred ccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCC
Q 015550 127 KQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGF 165 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~ 165 (405)
++++|+||||||.++..++..+|+. |+++|+++++..+.
T Consensus 162 ~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 8999999999999999999988864 78999998875443
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.4e-08 Score=89.45 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=43.5
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHh---C-CCeEEEEcCC-Cccccc-cCHHHHHHHHHHHHH
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKL---Y-PVARMIDLPG-GHLVSH-ERTEEVNQALIDLIK 319 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~-~~~~l~~~~g-gH~~~~-e~p~~v~~~i~~fl~ 319 (405)
.++|++|.+|..|.++|+...+.+.+++ . .+++++.+++ +|.... ........+|.+-++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFA 283 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHC
Confidence 3699999999999999999999988777 3 3677888887 897643 233344444444443
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-07 Score=78.29 Aligned_cols=173 Identities=18% Similarity=0.235 Sum_probs=109.2
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC--------------C
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV--------------P 102 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~--------------~ 102 (405)
.+||++||++.+...|..+.+.|.- .+...|++..|-.-.+.. .
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l----------------------~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~ 61 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPL----------------------PNIKWICPTAPSRPVTLNGGAFMNAWFDIMELS 61 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCC----------------------CCeeEEcCCCCCCcccccCCCcccceecceeeC
Confidence 3699999999999999888877654 255666554332111000 0
Q ss_pred -C-CCCCCCHHHHHHHHHHHHHHh---CC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 103 -V-KKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 103 -~-~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
. ....-.....++.+..+++.. |+ .++.+-|.||||++++..+..+|..+.+.+-..+..+.. ..
T Consensus 62 ~~~~~d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~------~~-- 133 (206)
T KOG2112|consen 62 SDAPEDEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRA------SI-- 133 (206)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccc------hh--
Confidence 0 001223445556666666654 33 478999999999999999999988888877766541000 00
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
.+. . |. .
T Consensus 134 ----------------------------~~~--------------~-----------------------~~--------~ 140 (206)
T KOG2112|consen 134 ----------------------------GLP--------------G-----------------------WL--------P 140 (206)
T ss_pred ----------------------------hcc--------------C-----------------------Cc--------c
Confidence 000 0 00 0
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQAL 314 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i 314 (405)
..+ ..|++..||+.|+++|....+...+.+ ...+++..++| +|...-+.-+++...|
T Consensus 141 ~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~ 201 (206)
T KOG2112|consen 141 GVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWI 201 (206)
T ss_pred ccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHH
Confidence 000 479999999999999987766666554 23478888999 9987666554444443
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.9e-08 Score=84.35 Aligned_cols=122 Identities=16% Similarity=0.112 Sum_probs=72.8
Q ss_pred CCEEEEEEEccC-----CC---CeEEEEecCCCCCCchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 23 NGIKIFYRTYGR-----GP---TKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 23 ~g~~i~y~~~G~-----~~---p~vvllHG~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.|.+|-|+-+-+ ++ |.|||+||.+..+..-.. +...+.. ..-...+.++-|+++.+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~ga---------------iawa~pedqcfVlAPQy 234 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGA---------------IAWAGPEDQCFVLAPQY 234 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccc---------------eeeecccCceEEEcccc
Confidence 467788877754 21 789999999887754332 2222211 00111112455666552
Q ss_pred -CCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 94 -RGMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 94 -~G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+=+..++..+ ..-.....+-+. .+.++.++ .+|+++|.|+||+-++.++.++|+.+.+.+++++.+
T Consensus 235 ~~if~d~e~~t---~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 235 NPIFADSEEKT---LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred ccccccccccc---chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 1122222211 112233344444 23344444 589999999999999999999999999999999763
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.2e-08 Score=89.15 Aligned_cols=83 Identities=24% Similarity=0.225 Sum_probs=51.7
Q ss_pred CCCCCCCCeEEEEecCCCCCCCCCCCCC---CCCCHHHH---------------HHHHHHHHHHh------CCccEEEEE
Q 015550 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYTTKIM---------------AKDVIALMDHL------GWKQAHVFG 133 (405)
Q Consensus 78 ~~~l~~~g~~Vi~~D~~G~G~S~~~~~~---~~~~~~~~---------------~~dl~~~l~~l------~~~~v~lvG 133 (405)
+..|+++||-|+++|.+|+|+....... ..++...+ +-|...++|.| +.++|.++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 3467789999999999999987543321 12222222 22333344544 235899999
Q ss_pred EChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 134 HSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 134 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+||||..++.+|+.. ++|+..|..+-.
T Consensus 233 fSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 233 FSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp EGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred ecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 999999999999986 589888877643
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.2e-08 Score=84.53 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=72.6
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCC-CCHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE-YTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~-~~~~~~~~ 115 (405)
|.|+|+||+.-....|..++.+++. .||-|+++++-..-. +....+ -+....++
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIAS----------------------HGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIAS----------------------HGFIVVAPQLYTLFP---PDGQDEIKSAASVIN 101 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhh----------------------cCeEEEechhhcccC---CCchHHHHHHHHHHH
Confidence 6799999999998899999999988 499999999875311 221111 12333334
Q ss_pred HHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCC
Q 015550 116 DVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTG 162 (405)
Q Consensus 116 dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 162 (405)
++.+-+.++ +..++.++|||.||-.|..+|..+- -.+.+||.++|..
T Consensus 102 WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 102 WLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 444444333 3458999999999999999998763 2478899998873
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.7e-08 Score=84.39 Aligned_cols=50 Identities=18% Similarity=0.241 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHh-C--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 113 MAKDVIALMDHL-G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 113 ~~~dl~~~l~~l-~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
+.+.+.+++... . .++|.|+|.|.||-+|+.+|..+| .|+++|.+++...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 445555666554 2 258999999999999999999998 8999999998753
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-06 Score=79.68 Aligned_cols=104 Identities=14% Similarity=0.031 Sum_probs=74.2
Q ss_pred CCeEEEEecCCCC-----CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 36 PTKVILITGLAGT-----HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~~~-----~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
.|.||++||.|-. ...|..+...++.. .+.-|+.+|+|=-=+.. ..-.+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~---------------------~~~vvvSVdYRLAPEh~-----~Pa~y 143 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE---------------------LNCVVVSVDYRLAPEHP-----FPAAY 143 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHH---------------------cCeEEEecCcccCCCCC-----CCccc
Confidence 3689999998743 34578888888663 38999999998332222 23345
Q ss_pred HHHHHHHHHHHHH------hCCccEEEEEEChhHHHHHHHHHhC------CcccceEEEeccCCCCC
Q 015550 111 KIMAKDVIALMDH------LGWKQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTGGGF 165 (405)
Q Consensus 111 ~~~~~dl~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~ 165 (405)
+|-.+.+.-+.++ .+.++++|+|-|.||.||..+|.+. +-++++.||+-|...+.
T Consensus 144 ~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 144 DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 5555555555553 2557899999999999999988763 35799999999875443
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.4e-06 Score=79.00 Aligned_cols=103 Identities=22% Similarity=0.310 Sum_probs=74.9
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCch------hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAW------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~------~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
+..|++.|-...-.. ....||++-|.++.-+.. +..+..+++. .+.+|+
T Consensus 117 Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~---------------------~~aNvl 175 (365)
T PF05677_consen 117 IQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE---------------------LGANVL 175 (365)
T ss_pred EeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH---------------------cCCcEE
Confidence 566777776544431 334799999988776651 1234444432 288999
Q ss_pred EecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C--CccEEEEEEChhHHHHHHHHHhC
Q 015550 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----G--WKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~--~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
.+++||.|.|.++. +.+++++|-.+.++.| | .+++++.|||+||.++..++..+
T Consensus 176 ~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 176 VFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred EECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 99999999997655 4688888888888776 2 25799999999999999876665
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.8e-08 Score=91.69 Aligned_cols=111 Identities=21% Similarity=0.351 Sum_probs=65.1
Q ss_pred CCCeEEEEecCCCCC--Cchh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 35 GPTKVILITGLAGTH--DAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 35 ~~p~vvllHG~~~~~--~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
.+|++|++|||.++. ..|. .+.+.+..... .+++||++|+...-... -......+.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~-------------------~d~NVI~VDWs~~a~~~--Y~~a~~n~~ 128 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDT-------------------GDYNVIVVDWSRGASNN--YPQAVANTR 128 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC---------------------S-EEEEEEE-HHHHSS---HHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhcc-------------------CCceEEEEcchhhcccc--ccchhhhHH
Confidence 457899999999888 3454 44454443100 28999999996332110 000011223
Q ss_pred HHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCc--ccceEEEeccCCCCCC
Q 015550 112 IMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQ 166 (405)
Q Consensus 112 ~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~ 166 (405)
.+.+.+..++..| ..++++|||||+||.+|-.++..... +|..+..++|+++.+.
T Consensus 129 ~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp HHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred HHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 3344444444333 35789999999999999999998877 8999999999976554
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.4e-06 Score=76.05 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=69.0
Q ss_pred CCeEEEEecCC--CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 36 PTKVILITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
+.|||+.||++ .+...+..+.+.+... .++.+..+. -|-+.. .. .-..+.+.
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~---------------------~~~pg~~v~-ig~~~~---~s-~~~~~~~Q 79 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINH---------------------SGYPGTCVE-IGNGVQ---DS-LFMPLRQQ 79 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhC---------------------CCCCeEEEE-ECCCcc---cc-cccCHHHH
Confidence 34699999999 4555677776666421 144333333 222221 10 11244444
Q ss_pred HHHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhCCc--ccceEEEeccCCCCCCCCcc
Q 015550 114 AKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 114 ~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~ 170 (405)
++.+.+.+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++..|....|.
T Consensus 80 v~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p~ 140 (306)
T PLN02606 80 ASIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIPK 140 (306)
T ss_pred HHHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCcc
Confidence 4444444333 22 359999999999999999999987 49999999998877766553
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.4e-07 Score=87.69 Aligned_cols=178 Identities=17% Similarity=0.194 Sum_probs=115.3
Q ss_pred CCeEEEEecCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccce
Q 015550 84 AGIEVCAFDNRGMGRSSVP------VKKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLS 154 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~------~~~~~~~~~~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~ 154 (405)
.||-|+.+|.||....... ..-....++|.++-+.-+.++.| .++|.+-|||+||.++++...++|+.++.
T Consensus 675 lGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifrv 754 (867)
T KOG2281|consen 675 LGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRV 754 (867)
T ss_pred cceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeE
Confidence 5999999999997544321 11124567888888888888875 46899999999999999999999998887
Q ss_pred EEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCc
Q 015550 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
.|.-+|... + ..|...|.+++++-....+.- |..
T Consensus 755 AIAGapVT~---------W------------------------~~YDTgYTERYMg~P~~nE~g---Y~a---------- 788 (867)
T KOG2281|consen 755 AIAGAPVTD---------W------------------------RLYDTGYTERYMGYPDNNEHG---YGA---------- 788 (867)
T ss_pred EeccCccee---------e------------------------eeecccchhhhcCCCccchhc---ccc----------
Confidence 776665421 0 011112222222222111000 000
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc-CHHH
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEE 309 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e-~p~~ 309 (405)
.. .....+.+..-.-..|++||--|.-+...+..+|...+ ++..++.++|+ -|.+--. .-.-
T Consensus 789 -----gS--------V~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~ 855 (867)
T KOG2281|consen 789 -----GS--------VAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIY 855 (867)
T ss_pred -----hh--------HHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchh
Confidence 00 00112233333345899999999999999988888777 45578999998 8987543 4455
Q ss_pred HHHHHHHHHHh
Q 015550 310 VNQALIDLIKA 320 (405)
Q Consensus 310 v~~~i~~fl~~ 320 (405)
+...|..|+++
T Consensus 856 yE~rll~FlQ~ 866 (867)
T KOG2281|consen 856 YEARLLHFLQE 866 (867)
T ss_pred HHHHHHHHHhh
Confidence 66778888764
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.5e-08 Score=90.55 Aligned_cols=92 Identities=26% Similarity=0.264 Sum_probs=65.4
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC--CCCCCCCCC----CCCCH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM--GRSSVPVKK----TEYTT 110 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~--G~S~~~~~~----~~~~~ 110 (405)
|.||+-||.++....+..+.+.|++ .||-|.++|++|- |........ ...-+
T Consensus 72 PlvvlshG~Gs~~~~f~~~A~~lAs----------------------~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~ 129 (365)
T COG4188 72 PLVVLSHGSGSYVTGFAWLAEHLAS----------------------YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEW 129 (365)
T ss_pred CeEEecCCCCCCccchhhhHHHHhh----------------------CceEEEeccCCCcccccCChhhcCCcccchhhh
Confidence 6788899999999999999999998 5999999999994 333322111 11122
Q ss_pred HHHHHHHHHHHHHh-------------CCccEEEEEEChhHHHHHHHHHhCCc
Q 015550 111 KIMAKDVIALMDHL-------------GWKQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 111 ~~~~~dl~~~l~~l-------------~~~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
.+...|+..+++.| ...+|.++|||+||+.++.++....+
T Consensus 130 ~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 130 WERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 33444555544433 33589999999999999999876543
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.5e-06 Score=78.51 Aligned_cols=70 Identities=21% Similarity=0.225 Sum_probs=54.4
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
|+.||.+.+.- .|. ...++++.......+++.+ +..+.+|+|-|.||+.++.+|+.+|+.+..+|+-+
T Consensus 100 GHPvYFV~F~p-----~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaG 172 (581)
T PF11339_consen 100 GHPVYFVGFFP-----EPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAG 172 (581)
T ss_pred CCCeEEEEecC-----CCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecC
Confidence 99998887641 122 2457888887777777665 23489999999999999999999999998888876
Q ss_pred cC
Q 015550 160 VT 161 (405)
Q Consensus 160 ~~ 161 (405)
++
T Consensus 173 aP 174 (581)
T PF11339_consen 173 AP 174 (581)
T ss_pred CC
Confidence 65
|
Their function is unknown. |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.4e-07 Score=82.30 Aligned_cols=88 Identities=24% Similarity=0.256 Sum_probs=53.3
Q ss_pred eEEEEecCCC-CCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE---EEEecCCCCCCCCCCCCC--CCCCHH
Q 015550 38 KVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVKK--TEYTTK 111 (405)
Q Consensus 38 ~vvllHG~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~---Vi~~D~~G~G~S~~~~~~--~~~~~~ 111 (405)
||||+||.++ ....|..+.+.|.. +||. |+++++-........... ..-+..
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~----------------------~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~ 60 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKA----------------------AGYCDSEVYALTYGSGNGSPSVQNAHMSCESAK 60 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHH----------------------TT--CCCEEEE--S-CCHHTHHHHHHB-HHHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHH----------------------cCCCcceeEeccCCCCCCCCcccccccchhhHH
Confidence 5999999999 55789999999988 5999 799998543332111100 001123
Q ss_pred HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
++++-+.+++.+-|. +|.||||||||+++-.+..-.
T Consensus 61 ~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 61 QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 455555555666688 999999999999998887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.5e-06 Score=72.67 Aligned_cols=94 Identities=14% Similarity=0.202 Sum_probs=61.6
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE-EEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE-VCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
++..|||..|||.+...+.++. +.+ ++. ++++|+|-. +.+.
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~~-----------------------~~D~l~~yDYr~l------------~~d~- 51 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LPE-----------------------NYDVLICYDYRDL------------DFDF- 51 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CCC-----------------------CccEEEEecCccc------------cccc-
Confidence 3457999999999887665543 122 444 466787732 1110
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
| .-+.+.++|||+|||-++|..+.... .++..|.+++++.+....-.++...+
T Consensus 52 --~------~~~y~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~~Pid~~~GIpp~iF 104 (213)
T PF04301_consen 52 --D------LSGYREIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTPYPIDDEYGIPPAIF 104 (213)
T ss_pred --c------cccCceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCCCCcCCCCCCCHHHH
Confidence 1 12457999999999999998876554 47888889988766554444444433
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-07 Score=82.22 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=57.3
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIA-LMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~-~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
||.|+.+++||++.|.+.+. .......++.+.+ .+..++. +.++++|||.||.-+..+|..||+ |+++||-++.
T Consensus 268 gYsvLGwNhPGFagSTG~P~--p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 268 GYSVLGWNHPGFAGSTGLPY--PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred CceeeccCCCCccccCCCCC--cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 99999999999999987664 3333333444333 4455654 579999999999999999999995 9999988764
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.4e-06 Score=79.06 Aligned_cols=135 Identities=17% Similarity=0.180 Sum_probs=79.5
Q ss_pred CCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcC-CCCCCCCchhhhccccCCCCCCCCeEEEEecCC-C
Q 015550 23 NGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAG-TDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-G 95 (405)
Q Consensus 23 ~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-G 95 (405)
.+.+++|.-... ..|.||.+.|.+|++..+..+.+ ... +..+ +. ....... ..---+..+++-+|.| |
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e-~GP~~~~~-~~-~~~l~~n--~~sW~~~an~l~iD~PvG 96 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGE-NGPFRINP-DG-PYTLEDN--PYSWNKFANLLFIDQPVG 96 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCT-TSSEEEET-TS-TSEEEE---TT-GGGTSEEEEE--STT
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccc-cCceEEee-cc-ccccccc--ccccccccceEEEeecCc
Confidence 477888866653 45789999999999988754332 111 0000 00 0000000 0000025789999955 9
Q ss_pred CCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHh----C------CcccceEEE
Q 015550 96 MGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----V------PERVLSLAL 157 (405)
Q Consensus 96 ~G~S~~~~~~-~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl 157 (405)
.|.|...... ...+.++.++|+..++..+ .-.+++|.|.|+||..+-.+|.. . +-.++++++
T Consensus 97 tGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~I 176 (415)
T PF00450_consen 97 TGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAI 176 (415)
T ss_dssp STT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEE
T ss_pred eEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccccee
Confidence 9999765542 2457888889988888765 33589999999999987777653 2 234889999
Q ss_pred eccCC
Q 015550 158 LNVTG 162 (405)
Q Consensus 158 ~~~~~ 162 (405)
.++..
T Consensus 177 Gng~~ 181 (415)
T PF00450_consen 177 GNGWI 181 (415)
T ss_dssp ESE-S
T ss_pred cCccc
Confidence 98764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=2e-06 Score=82.76 Aligned_cols=149 Identities=18% Similarity=0.220 Sum_probs=98.9
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------HhCCccEEEEEEChhHHHHHHHHHhCCc-ccceE
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD--------HLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSL 155 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~--------~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~l 155 (405)
-..|-+||++.--. ..++..-++.+..+.. ++...+++|+|.|||+.++++......| .|+++
T Consensus 208 vvev~tfdl~n~ig--------G~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~v 279 (784)
T KOG3253|consen 208 VVEVPTFDLNNPIG--------GANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAV 279 (784)
T ss_pred eeeeccccccCCCC--------CcchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEE
Confidence 56788888863211 1345555555555554 2344689999999999999998876542 48888
Q ss_pred EEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcc
Q 015550 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (405)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
|.++-+..... . +
T Consensus 280 VCigypl~~vd------g--------------p----------------------------------------------- 292 (784)
T KOG3253|consen 280 VCIGYPLDTVD------G--------------P----------------------------------------------- 292 (784)
T ss_pred EEecccccCCC------c--------------c-----------------------------------------------
Confidence 88874310000 0 0
Q ss_pred cchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccC--------
Q 015550 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHER-------- 306 (405)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~-------- 306 (405)
+...+ +.+-.++.|||++.|.+|..+++...+.+.+++....+++++++ +|.+-...
T Consensus 293 -----------rgirD---E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegl 358 (784)
T KOG3253|consen 293 -----------RGIRD---EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGL 358 (784)
T ss_pred -----------cCCcc---hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccc
Confidence 00111 22345668999999999999999999999999988889999998 89775422
Q ss_pred -HHHHHHHHHHHHHhhc
Q 015550 307 -TEEVNQALIDLIKASE 322 (405)
Q Consensus 307 -p~~v~~~i~~fl~~~~ 322 (405)
..+|...+.++|.+.-
T Consensus 359 tqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 359 TQSEVDSAIAQAIKEFV 375 (784)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 3455555555554443
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.2e-06 Score=72.93 Aligned_cols=126 Identities=25% Similarity=0.282 Sum_probs=86.8
Q ss_pred CCcccccCCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhH--hhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 16 PDAALNDNGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
....+..+|.+..|+.+-+ ++|.||.+||-.++...+.... ..|++. .||-|
T Consensus 36 ~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~---------------------~gFlV 94 (312)
T COG3509 36 SVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR---------------------EGFLV 94 (312)
T ss_pred CccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc---------------------cCcEE
Confidence 3445677888888777754 4578999999999887655544 455553 39999
Q ss_pred EEecC-------CCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEE
Q 015550 89 CAFDN-------RGMGRSSVPVK--KTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLAL 157 (405)
Q Consensus 89 i~~D~-------~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 157 (405)
..+|- .+.+.+..+.. ...-+...+.+-+..++...+++ +|++.|.|-||.++..++..+|+.+.++..
T Consensus 95 ~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~ 174 (312)
T COG3509 95 AYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAP 174 (312)
T ss_pred ECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceee
Confidence 99852 12233322221 11123334444555555666766 899999999999999999999999999999
Q ss_pred eccCC
Q 015550 158 LNVTG 162 (405)
Q Consensus 158 ~~~~~ 162 (405)
+++..
T Consensus 175 VAg~~ 179 (312)
T COG3509 175 VAGLL 179 (312)
T ss_pred eeccc
Confidence 98765
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.9e-05 Score=68.73 Aligned_cols=108 Identities=15% Similarity=0.161 Sum_probs=69.5
Q ss_pred CeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 37 TKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 37 p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.|+|+.||+|.+... ...+.+.+... .|..+.++.. |.+. ....-..+.+.+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~---------------------~g~~~~~i~i---g~~~--~~s~~~~~~~Qv 79 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNL---------------------SGSPGFCLEI---GNGV--GDSWLMPLTQQA 79 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhC---------------------CCCceEEEEE---CCCc--cccceeCHHHHH
Confidence 369999999987653 34444444221 1566666554 3321 111223444555
Q ss_pred HHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhCCc--ccceEEEeccCCCCCCCCccc
Q 015550 115 KDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 115 ~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+.+.+.+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++..|....|.-
T Consensus 80 e~vce~l~~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~p~C 140 (314)
T PLN02633 80 EIACEKVKQMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSLPRC 140 (314)
T ss_pred HHHHHHHhhchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCCCCC
Confidence 544444433 22 359999999999999999999987 599999999988776665553
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-06 Score=75.39 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=66.1
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.+..+||+||+..+.+.--..+..+...+. ....++.|.||+.|.-..-.. ...+...-.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~-------------------~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~ 76 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLG-------------------FPGVVILFSWPSDGSLLGYFY-DRESARFSG 76 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhC-------------------CCceEEEEEcCCCCChhhhhh-hhhhHHHHH
Confidence 455799999999876543222222222100 123899999998886321111 111333334
Q ss_pred HHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHh----CC-----cccceEEEeccC
Q 015550 115 KDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAM----VP-----ERVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~ 161 (405)
.++..++..+ +.++|++++||||+.+.+..... .+ .++..+||++|-
T Consensus 77 ~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 77 PALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred HHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 4555555544 56799999999999998887654 21 367889999864
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.27 E-value=3e-05 Score=67.46 Aligned_cols=208 Identities=17% Similarity=0.198 Sum_probs=111.5
Q ss_pred CCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHHHH------hCCccEEEEEEChhHHHHHHHHHhC
Q 015550 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV--------IALMDH------LGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 83 ~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl--------~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+++...+.+..|-+|+...+.. ..+.-+.+.|+ .+.... .|..+..++|-||||.+|......+
T Consensus 139 k~~i~tmvle~pfYgqr~p~~q--~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~ 216 (371)
T KOG1551|consen 139 KREIATMVLEKPFYGQRVPEEQ--IIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLH 216 (371)
T ss_pred hhcchheeeecccccccCCHHH--HHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccC
Confidence 3689999999999998754432 11111122222 222222 2567899999999999999999988
Q ss_pred CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhh--hCCCchhHHHHHHHHhhh
Q 015550 149 PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEY--VGSSTRRAILYQEYVKGI 226 (405)
Q Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 226 (405)
+..|.-+-++++...........-....+...++.....-.... .....+.+.... ...+. +.+ ...+++.
T Consensus 217 q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~----~r~p~Q~~~~~~~~~srn~-~~E-~~~~Mr~- 289 (371)
T KOG1551|consen 217 QKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYT----SRNPAQSYHLLSKEQSRNS-RKE-SLIFMRG- 289 (371)
T ss_pred CCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhh----hhCchhhHHHHHHHhhhcc-hHH-HHHHHHH-
Confidence 87777776666543221111111111111111111110000000 000001111100 00000 000 0011110
Q ss_pred hhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc-----EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCcc
Q 015550 227 SATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL-----VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL 301 (405)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~ 301 (405)
.-++...+....+| +.++.+++|..+|..-...+.+.. |++++..++|||.
T Consensus 290 -----------------------vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~W-Pg~eVr~~egGHV 345 (371)
T KOG1551|consen 290 -----------------------VMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIW-PGCEVRYLEGGHV 345 (371)
T ss_pred -----------------------HHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhC-CCCEEEEeecCce
Confidence 01111122222233 678889999999987778888865 9999999999996
Q ss_pred cc-ccCHHHHHHHHHHHHHhhcC
Q 015550 302 VS-HERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 302 ~~-~e~p~~v~~~i~~fl~~~~~ 323 (405)
.. +-+-+++.++|.+-|++...
T Consensus 346 sayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 346 SAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred eeeehhchHHHHHHHHHHHhhhh
Confidence 54 45778999999999988763
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00013 Score=67.73 Aligned_cols=39 Identities=31% Similarity=0.334 Sum_probs=33.2
Q ss_pred HhCCccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccC
Q 015550 123 HLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVT 161 (405)
Q Consensus 123 ~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 161 (405)
..+.++++|+||+.|+..+..+....+. .++++|++++.
T Consensus 189 ~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 189 QQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred hcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 3455679999999999999999988764 58999999976
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.2e-05 Score=64.96 Aligned_cols=107 Identities=21% Similarity=0.183 Sum_probs=71.9
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC----CCCCC----CC-----C
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSSV----PV-----K 104 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~----G~S~~----~~-----~ 104 (405)
|.|||||.+|+..+...++..|...++..+ .-=++.+|--|- |.=+. |. .
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~-----------------e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe 109 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGT-----------------ESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFE 109 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccc-----------------cceEEEEcCCCcEEEeeeecccCCCCeEEEEEe
Confidence 689999999999999999998887432211 223455555441 11010 00 0
Q ss_pred CCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccC
Q 015550 105 KTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (405)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 161 (405)
...-+..++...+..++..| +++++.++||||||.-...|+..+.+ .++.+|.++++
T Consensus 110 ~n~~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 110 DNTASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred cCcCchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 11234455566666666554 78899999999999999999887532 48999999976
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=70.32 Aligned_cols=107 Identities=16% Similarity=0.202 Sum_probs=57.8
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH---
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM--- 113 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~--- 113 (405)
..|||+||+.++...|..+...+.... ..+.--.+...+....... ...+++..
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~--------------------~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~r 61 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIP--------------------EDLPNARIVVLGYSNNEFK---TFDGIDVCGER 61 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhh--------------------hhcchhhhhhhcccccccc---cchhhHHHHHH
Confidence 469999999999998877766665410 0111111111111111101 12234444
Q ss_pred -HHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHh---CC----c-----ccceEEEeccCCCCCC
Q 015550 114 -AKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM---VP----E-----RVLSLALLNVTGGGFQ 166 (405)
Q Consensus 114 -~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~---~p----~-----~v~~lvl~~~~~~~~~ 166 (405)
++++.+.++.... .++++|||||||.++-.+... .+ + +....+.++++..|..
T Consensus 62 L~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~ 129 (217)
T PF05057_consen 62 LAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSR 129 (217)
T ss_pred HHHHHHHhccccccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCc
Confidence 4444444444443 489999999999998655542 22 1 2334566777655544
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=8.9e-05 Score=71.56 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+.+++++.-.+++. +.++.+|.|+||||..|+.++.++|+++.+++.+++.
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 33456666666654 2356899999999999999999999999999999975
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.8e-06 Score=77.73 Aligned_cols=103 Identities=24% Similarity=0.301 Sum_probs=81.2
Q ss_pred eEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE---EEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 38 ~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~---Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+++++||++.+...|.++...+.. .|+. ++.++.++. ....+ .....+.+.
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~----------------------~g~~~~~~~~~~~~~~-~~~~~---~~~~~~ql~ 114 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAI----------------------LGWLTNGVYAFELSGG-DGTYS---LAVRGEQLF 114 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcc----------------------hHHHhccccccccccc-CCCcc---ccccHHHHH
Confidence 699999998888888888777665 3666 889988866 11111 234566677
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCCCCCC
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~ 166 (405)
.-+.+++...+.+++.++||||||.+...++...+ .+|+.++.++++..+..
T Consensus 115 ~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 115 AYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred HHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 77778888888899999999999999999999888 78999999998865443
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.9e-05 Score=70.43 Aligned_cols=40 Identities=25% Similarity=0.421 Sum_probs=35.7
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
|.|||-||++++...|..++-.|+. .||-|.++++|-+-.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAS----------------------hG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLAS----------------------HGFVVAAVEHRDRSA 158 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhh----------------------CceEEEEeecccCcc
Confidence 7899999999999999999999988 499999999986543
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=8.3e-05 Score=72.83 Aligned_cols=131 Identities=21% Similarity=0.241 Sum_probs=83.8
Q ss_pred ccccCCEEEEEEEccC---C-CCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 19 ALNDNGIKIFYRTYGR---G-PTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~---~-~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
+..-||++|+-..+-+ + .|+++..+-++-.... +..+...+.. ....+.+||.|+..|
T Consensus 24 V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~----------------~~~~aa~GYavV~qD 87 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQ----------------PAWFAAQGYAVVNQD 87 (563)
T ss_pred EEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccc----------------cceeecCceEEEEec
Confidence 3456999999777654 2 3566666733322221 1111000000 012233699999999
Q ss_pred CCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 93 NRGMGRSSVPVKKTEYT-TKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~-~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
.||.|.|++.... .++ -.+-.-|+++++....+ .+|..+|-|++|+..+.+|+..|-.++.++...+....+.
T Consensus 88 vRG~~~SeG~~~~-~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 88 VRGRGGSEGVFDP-ESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred ccccccCCcccce-eccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 9999999876542 222 11223466666666654 5899999999999999999998888999988887755443
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00032 Score=59.75 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=71.4
Q ss_pred CeEEEEecCCCCCC---chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 37 TKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 37 p~vvllHG~~~~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
..||||-|++..-- .-.++...|.+ .+|..+-+-++.+ ..+....++++-
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde----------------------~~wslVq~q~~Ss-----y~G~Gt~slk~D 89 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDE----------------------NSWSLVQPQLRSS-----YNGYGTFSLKDD 89 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhh----------------------ccceeeeeecccc-----cccccccccccc
Confidence 46888988887542 34456666665 4899998887632 111124467788
Q ss_pred HHHHHHHHHHhCC----ccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccCC
Q 015550 114 AKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 162 (405)
++|+.++++|++. ..|+|+|||.|+.=.+.|... .|..|...|+.+|..
T Consensus 90 ~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 90 VEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred HHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 9999999999853 379999999999988777633 456688888888774
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0016 Score=63.23 Aligned_cols=59 Identities=19% Similarity=0.285 Sum_probs=47.7
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-eEEEEcCC-CccccccCHHHHHHHHH
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----------------------~~-~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
+++||+..|+.|.+++.--.+.+.+.+. .+ .+++.+.+ ||++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5899999999999999887777777652 12 34556667 99996 69999999999
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.8e-05 Score=59.62 Aligned_cols=60 Identities=28% Similarity=0.398 Sum_probs=54.0
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..|+|++.++.|.++|.+.++++++.+ ++++++..++ ||..+...-.-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 589999999999999999999999998 7799999999 99988665678899999999753
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00042 Score=62.13 Aligned_cols=60 Identities=10% Similarity=-0.008 Sum_probs=49.0
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHHH
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEEVNQALIDLI 318 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl 318 (405)
...+|-|+++++.|.+++.+..++.++.. +-+++...+++ .|..++. +|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 34589999999999999998888887655 23466777777 8988876 8999999999884
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00022 Score=65.51 Aligned_cols=67 Identities=18% Similarity=0.304 Sum_probs=51.7
Q ss_pred hhhhhcC-CcEEEEeecCCccCCHHHHHHHHHHhCC-CeEEEEcCC-CccccccCHH---HHHHHHHHHHHhh
Q 015550 255 QTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTE---EVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-~~~l~~~~g-gH~~~~e~p~---~v~~~i~~fl~~~ 321 (405)
..+..+. +|+|+++|..|.++|...+..+.+.... ..+...+++ +|........ +..+.+.+|+.+.
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3444554 7999999999999999999999987744 456777776 8988865443 6788888888764
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.002 Score=62.57 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=47.5
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-eEEEEcCC-CccccccCHHHHHHHHH
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----------------------~~-~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
+++||+..|+.|.+++.--.+.+.+.+. .+ .+++.+.+ ||++. .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999999888887776652 11 34556666 99996 59999999999
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00018 Score=65.99 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=64.7
Q ss_pred CCCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC---CCCCCH
Q 015550 35 GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK---KTEYTT 110 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~---~~~~~~ 110 (405)
++..+||+||+..+-+. -...++-.... +.....+.|.||..|.--.-.. ...|+-
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~--------------------g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr 174 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDS--------------------GNDGVPVVFSWPSRGSLLGYNYDRESTNYSR 174 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhc--------------------CCCcceEEEEcCCCCeeeecccchhhhhhhH
Confidence 45679999999876542 22222222221 0256788999998776422111 013333
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh--------CCcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM--------VPERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~~~ 161 (405)
..+.+-+..+.+....++|+|++||||.+++++...+ .+.+++-+||-+|-
T Consensus 175 ~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 175 PALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred HHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 3333333333344457789999999999999987654 23467788887743
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00045 Score=60.67 Aligned_cols=107 Identities=18% Similarity=0.188 Sum_probs=73.7
Q ss_pred CeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC--CCCCCCCCCCCCHHH
Q 015550 37 TKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG--RSSVPVKKTEYTTKI 112 (405)
Q Consensus 37 p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G--~S~~~~~~~~~~~~~ 112 (405)
-|+|++||++++... ...+.+.+.+. .|..|+++|. |-| .|. -..+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~---------------------~g~~v~~lei-g~g~~~s~------l~pl~~ 75 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEEL---------------------PGSPVYCLEI-GDGIKDSS------LMPLWE 75 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhC---------------------CCCeeEEEEe-cCCcchhh------hccHHH
Confidence 359999999998876 66676666652 2889999996 333 221 223344
Q ss_pred HHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCCCccc
Q 015550 113 MAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 113 ~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~ 171 (405)
.++.+.+.+.... ..-++++|.|.||.++-.++...++ .|+.+|.++++..+....|.-
T Consensus 76 Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p~c 137 (296)
T KOG2541|consen 76 QVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIPRC 137 (296)
T ss_pred HHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCCCC
Confidence 4444443333221 1458999999999999999988664 599999999887776665553
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00035 Score=61.92 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=72.3
Q ss_pred CCeEEEEecCCCCCCc-hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 36 PTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.|.||++-...|+... .+...+.|.. ...|+..|+----.-+ -....+++++++
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp-----------------------~~~vyitDW~dAr~Vp--~~~G~FdldDYI 157 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP-----------------------YHDVYITDWVDARMVP--LEAGHFDLDDYI 157 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc-----------------------ccceeEeeccccceee--cccCCccHHHHH
Confidence 4567777777766543 4556666766 6789999986433332 222478999999
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHH-----HHHHHHHhCCcccceEEEeccCC
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAM-----IACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~-----ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+-+++.+..+|.+ +++++-|.-+. ++++.+...|..-.++++++++.
T Consensus 158 dyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 158 DYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred HHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 9999999999954 89999887654 44444445677788999998764
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00013 Score=61.57 Aligned_cols=107 Identities=22% Similarity=0.290 Sum_probs=68.7
Q ss_pred CCeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC--CC---CCCCCCCC----
Q 015550 36 PTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR--GM---GRSSVPVK---- 104 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~--G~---G~S~~~~~---- 104 (405)
-|+|.++.|+..+.+.+-. .....+.+ .|+.|+++|-. |. |.++.-+.
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~---------------------hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASK---------------------HGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhh---------------------cCeEEECCCCCCCccccCCCcccccccCCc
Confidence 3678899999999886532 12222221 48999999853 33 22211000
Q ss_pred -----------CCCCCHHH-HHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 105 -----------KTEYTTKI-MAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 105 -----------~~~~~~~~-~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
...|.+.+ +++.+.++++. ++..++.+.||||||.-|+..+.+.|.+.+++-..+|...
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 01122222 33555555552 2345799999999999999999999999999998888753
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00013 Score=72.70 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=71.4
Q ss_pred cCCEEEEEEEccC----------CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 22 DNGIKIFYRTYGR----------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 22 ~~g~~i~y~~~G~----------~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
.+-+.++.+..|. +.-||+||+|..|+-..-+.++..-..-+.... .......+....++.+++
T Consensus 65 a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~------~e~t~~~d~~~~~DFFaV 138 (973)
T KOG3724|consen 65 ADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGP------FEKTEDRDNPFSFDFFAV 138 (973)
T ss_pred CCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCc------hhhhhcccCccccceEEE
Confidence 3556666555442 223699999999987665555543331110000 001222334457788888
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C--------CccEEEEEEChhHHHHHHHHHh---CCcccceE
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----G--------WKQAHVFGHSMGAMIACKLAAM---VPERVLSL 155 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-----~--------~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~l 155 (405)
|+-+-= ......++.+.++-+.+.++.+ + .+.|+++||||||++|...+.. .++.|+-+
T Consensus 139 DFnEe~-----tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntI 213 (973)
T KOG3724|consen 139 DFNEEF-----TAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTI 213 (973)
T ss_pred cccchh-----hhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhh
Confidence 875410 0011224555555444444322 2 2349999999999999877653 24556667
Q ss_pred EEeccC
Q 015550 156 ALLNVT 161 (405)
Q Consensus 156 vl~~~~ 161 (405)
+..+++
T Consensus 214 ITlssP 219 (973)
T KOG3724|consen 214 ITLSSP 219 (973)
T ss_pred hhhcCc
Confidence 777665
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0008 Score=62.53 Aligned_cols=85 Identities=25% Similarity=0.248 Sum_probs=61.3
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
..-||+.|=|+-.+.=+.+..+|.+ +|+.|+.+|-.-+=.| ..+.++.++|
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~----------------------~gvpVvGvdsLRYfW~-------~rtPe~~a~D 311 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQK----------------------QGVPVVGVDSLRYFWS-------ERTPEQIAAD 311 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHH----------------------CCCceeeeehhhhhhc-------cCCHHHHHHH
Confidence 3456666666544444566677776 6999999996533333 4477889999
Q ss_pred HHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc
Q 015550 117 VIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 117 l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
+..++++. +.+++.|+|+|+|+-+.-....+.|.
T Consensus 312 l~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 312 LSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 99988876 55789999999999987776666553
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0088 Score=55.95 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=47.3
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC-----------------------CC-eEEEEcCC-CccccccCHHHHHHHHH
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----------------------~~-~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
+++|||..|+.|.+++.--.+.+.+.+. .+ .+++.+.+ ||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 5899999999999999887777777662 11 34555667 99996 59999999999
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0029 Score=59.43 Aligned_cols=110 Identities=15% Similarity=0.075 Sum_probs=70.9
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.+|.||++||.|-.-.....++..|...+..+ . ...++.+|+.-...-. .....+.-+.+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l---------------~--~~SILvLDYsLt~~~~-~~~~yPtQL~qlv 182 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL---------------P--EVSILVLDYSLTSSDE-HGHKYPTQLRQLV 182 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc---------------C--CCeEEEEecccccccc-CCCcCchHHHHHH
Confidence 45889999999877766555554443311111 1 3488888876443000 0111233455666
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC--Cc---ccceEEEeccCC
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PE---RVLSLALLNVTG 162 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~---~v~~lvl~~~~~ 162 (405)
+-...+++..|.++++|+|-|.||.+++.+.+.. ++ .-+++||++|..
T Consensus 183 ~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 183 ATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred HHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 6666777677889999999999999999886532 11 257999999874
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.63 E-value=8.4e-05 Score=67.03 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHh-CCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 113 MAKDVIALMDHL-GWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 113 ~~~dl~~~l~~l-~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+.+++...++.- ... +..++|+||||..|+.++.++|+.+.+++.+++.
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 445666666643 322 2799999999999999999999999999999975
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.01 Score=57.50 Aligned_cols=134 Identities=15% Similarity=0.055 Sum_probs=79.1
Q ss_pred cccccC---CEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCC------
Q 015550 18 AALNDN---GIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG------ 83 (405)
Q Consensus 18 ~~~~~~---g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~------ 83 (405)
.+++++ +..++|.-... .+|.||.+.|.+|++..- -++.++.. +.- . ..+.-|..
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GP----f~v-----~-~~G~tL~~N~ySWn 115 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGP----FRV-----K-YNGKTLYLNPYSWN 115 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCC----eEE-----c-CCCCcceeCCcccc
Confidence 334444 78888865442 457899999999988654 22222221 000 0 00001111
Q ss_pred CCeEEEEecCC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHh----C--
Q 015550 84 AGIEVCAFDNR-GMGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----V-- 148 (405)
Q Consensus 84 ~g~~Vi~~D~~-G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~----~-- 148 (405)
+--+++-+|.| |.|.|-..+.. ...+-+..++|...++... .-++++|.|-|++|...-.+|.. .
T Consensus 116 k~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~ 195 (454)
T KOG1282|consen 116 KEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKK 195 (454)
T ss_pred ccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccc
Confidence 13468899988 88888543321 1124455667766666533 33689999999999877777653 2
Q ss_pred ----CcccceEEEeccCC
Q 015550 149 ----PERVLSLALLNVTG 162 (405)
Q Consensus 149 ----p~~v~~lvl~~~~~ 162 (405)
+-.++|+++-++..
T Consensus 196 ~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 196 CCKPNINLKGYAIGNGLT 213 (454)
T ss_pred ccCCcccceEEEecCccc
Confidence 12478888877764
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00052 Score=67.29 Aligned_cols=119 Identities=18% Similarity=0.144 Sum_probs=75.0
Q ss_pred CEEEEEEEccC----CCCeEEEEecCCCCCCch---hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 24 GIKIFYRTYGR----GPTKVILITGLAGTHDAW---GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 24 g~~i~y~~~G~----~~p~vvllHG~~~~~~~~---~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
-.+.+|..... +.| |+|.-|.-+..+.. ..++..|++. -|--|+++++|-+
T Consensus 13 tf~qRY~~n~~~~~~~gp-ifl~~ggE~~~~~~~~~~~~~~~lA~~---------------------~~a~~v~lEHRyY 70 (434)
T PF05577_consen 13 TFSQRYWVNDQYYKPGGP-IFLYIGGEGPIEPFWINNGFMWELAKE---------------------FGALVVALEHRYY 70 (434)
T ss_dssp EEEEEEEEE-TT--TTSE-EEEEE--SS-HHHHHHH-HHHHHHHHH---------------------HTEEEEEE--TTS
T ss_pred eEEEEEEEEhhhcCCCCC-EEEEECCCCccchhhhcCChHHHHHHH---------------------cCCcEEEeehhhh
Confidence 34556655542 444 66666665554322 2244555553 2789999999999
Q ss_pred CCCCCCCC-----CCCCCHHHHHHHHHHHHHHhC-------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 97 GRSSVPVK-----KTEYTTKIMAKDVIALMDHLG-------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 97 G~S~~~~~-----~~~~~~~~~~~dl~~~l~~l~-------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
|.|.+... -...+.++..+|+..+++++. -.|++++|-|+||++|..+-.+||+.|.+.+.-+++...
T Consensus 71 G~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 71 GKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred cCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 99964321 134688899999999988763 137999999999999999999999999999988877543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0045 Score=58.33 Aligned_cols=63 Identities=14% Similarity=0.027 Sum_probs=44.3
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEc-----------CC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDL-----------PG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~-----------~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
++-....|+..|..+|.+.-+.+.+.+ .=+++++.+ .. .|.+-+..-.-+...+-..+++...
T Consensus 293 ~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 293 KIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQG 370 (403)
T ss_pred ceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhc
Confidence 345678899999999999888887765 446788776 24 5665555555666776666666443
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.002 Score=60.68 Aligned_cols=70 Identities=14% Similarity=0.042 Sum_probs=58.4
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCCC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~~ 325 (405)
.+....++++|-++|.|..|....+.....+.+.+.....+..+|+ +|.... ..+.+.|..|+.......
T Consensus 254 P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 254 PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHcCC
Confidence 3344466789999999999999999999999999966788999998 998866 678888999998875543
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00014 Score=65.24 Aligned_cols=110 Identities=15% Similarity=0.087 Sum_probs=57.8
Q ss_pred CeEEEEecCCCCC---Cchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC-CCCCCCCCCC
Q 015550 37 TKVILITGLAGTH---DAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVPVKKTEYT 109 (405)
Q Consensus 37 p~vvllHG~~~~~---~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S-~~~~~~~~~~ 109 (405)
.|||+.||+|.+. ..+..+ ++.... |..|.+++.- -+.+ +.... .-.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-----------------------G~yV~si~ig-~~~~~D~~~s-~f~~ 60 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-----------------------GTYVHSIEIG-NDPSEDVENS-FFGN 60 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHST-----------------------T--EEE--SS-SSHHHHHHHH-HHSH
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCC-----------------------CceEEEEEEC-CCcchhhhhh-HHHH
Confidence 3699999999764 244444 333333 8888888873 2211 10000 0123
Q ss_pred HHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCCCccc
Q 015550 110 TKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~ 171 (405)
+.+.++.+.+.+.... ..-++++|+|.||.++-.++.+.|+ .|+.+|.++++..|....|..
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~p~c 125 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGLPFC 125 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-TCH
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccCCcc
Confidence 3444444444444321 1469999999999999999999875 699999999988777666653
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00092 Score=66.71 Aligned_cols=78 Identities=17% Similarity=0.091 Sum_probs=49.4
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHH---HHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHh--CCcccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMA---KDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAM--VPERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~ 153 (405)
++-|+.+++| |+..+........+-+.|.. +.+.+-++.+| .++|+|+|+|.||..+..++.. .+..++
T Consensus 125 ~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~ 204 (493)
T cd00312 125 NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFH 204 (493)
T ss_pred CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHH
Confidence 3999999999 33333221111122233333 34444455554 3589999999999999888775 234688
Q ss_pred eEEEeccCC
Q 015550 154 SLALLNVTG 162 (405)
Q Consensus 154 ~lvl~~~~~ 162 (405)
++|++++..
T Consensus 205 ~~i~~sg~~ 213 (493)
T cd00312 205 RAISQSGSA 213 (493)
T ss_pred HHhhhcCCc
Confidence 899888654
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00069 Score=65.14 Aligned_cols=119 Identities=18% Similarity=0.234 Sum_probs=70.1
Q ss_pred cccCCEEEEEEEccCCCCeEEEEe-cCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILIT-GLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllH-G~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
...+|+.|.....|.-. .|-.+- .+......|..+++.|.+. ++..+......-+|+|=
T Consensus 35 ~~~~gv~i~~~~~g~~~-~i~~ld~~~~~~~~~~~~li~~L~~~----------------GY~~~~~l~~~pYDWR~--- 94 (389)
T PF02450_consen 35 SNDPGVEIRVPGFGGTS-GIEYLDPSFITGYWYFAKLIENLEKL----------------GYDRGKDLFAAPYDWRL--- 94 (389)
T ss_pred ecCCCceeecCCCCcee-eeeecccccccccchHHHHHHHHHhc----------------CcccCCEEEEEeechhh---
Confidence 34566777665555211 122221 1212222789999999762 01111122334478872
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCc------ccceEEEeccCCCCC
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPE------RVLSLALLNVTGGGF 165 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~~ 165 (405)
+ ....+++...+.+.++.. .-++|+|+||||||.++..+....+. .|+++|.++++..|.
T Consensus 95 ~-------~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 95 S-------PAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred c-------hhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 1 112334555555555543 24799999999999999999888753 599999999875543
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00035 Score=56.82 Aligned_cols=88 Identities=16% Similarity=0.223 Sum_probs=62.9
Q ss_pred EEEEecCCCCCCchhhhH--hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 39 VILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 39 vvllHG~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
||++|||.++..+...+. ..+.. |.|-.+.+... ...+....++.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~------------------------------~~~~i~y~~p~---l~h~p~~a~~e 48 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE------------------------------DVRDIEYSTPH---LPHDPQQALKE 48 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc------------------------------cccceeeecCC---CCCCHHHHHHH
Confidence 799999999888876543 22332 11222222211 14478889999
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+..++...+.+...++|-|+||+.|..++.++. + ..|++||..
T Consensus 49 le~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--i-rav~~NPav 91 (191)
T COG3150 49 LEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--I-RAVVFNPAV 91 (191)
T ss_pred HHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--C-hhhhcCCCc
Confidence 999999998788999999999999999999874 3 445677764
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0082 Score=48.58 Aligned_cols=92 Identities=14% Similarity=0.229 Sum_probs=59.6
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE-EEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE-VCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
..||+.-|++..+.....++ +.+ ++. ++++|+....- ++++..
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpe-----------------------N~dl~lcYDY~dl~l--------dfDfsA--- 55 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPE-----------------------NHDLLLCYDYQDLNL--------DFDFSA--- 55 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCC-----------------------CCcEEEEeehhhcCc--------ccchhh---
Confidence 36888889988877655543 222 554 56788763321 222221
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
.+.+.+|++|||-.+|-.+..-. +.++.+.+++++.+-.....+....+
T Consensus 56 ----------y~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTgLpcDds~GIp~AIF 104 (214)
T COG2830 56 ----------YRHIRLVAWSMGVWVAERVLQGI--RLKSATAINGTGLPCDDSFGIPPAIF 104 (214)
T ss_pred ----------hhhhhhhhhhHHHHHHHHHHhhc--cccceeeecCCCCCccccCCCCHHHH
Confidence 14567999999999999888765 58889999988765554444444333
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0052 Score=60.13 Aligned_cols=117 Identities=18% Similarity=0.180 Sum_probs=75.6
Q ss_pred cccCCEEEEEEEccCC-----CCeEEEEecCCCCC----CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFYRTYGRG-----PTKVILITGLAGTH----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~-----~p~vvllHG~~~~~----~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+-||.+|.|...+++ .|+ ++||+|+-. -.|.+....+.+ +|...+.
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pT--ll~aYGGF~vsltP~fs~~~~~WLe----------------------rGg~~v~ 455 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPT--LLYAYGGFNISLTPRFSGSRKLWLE----------------------RGGVFVL 455 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCce--EEEeccccccccCCccchhhHHHHh----------------------cCCeEEE
Confidence 5679999999777532 454 455555432 235555554444 3888888
Q ss_pred ecCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHh---CC---ccEEEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 91 FDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHL---GW---KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~l---~~---~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
-+.||=|.=...-.. ...+-+...+|..++.+.| |+ +++.+.|-|-||.+.-....++|+.+.++|+--|
T Consensus 456 ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 456 ANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred EecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 899997765321110 1112334556666666655 33 4789999999999988888899998877776544
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0029 Score=58.60 Aligned_cols=55 Identities=27% Similarity=0.285 Sum_probs=41.1
Q ss_pred CCHHHHH-HHHHHHHH-HhCC----ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 108 YTTKIMA-KDVIALMD-HLGW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 108 ~~~~~~~-~dl~~~l~-~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+.++++. +++-+.++ +... ++..++||||||.-|+.+|+++|+++..+..+++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 4454443 45554444 3331 268999999999999999999999999999888764
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0083 Score=56.10 Aligned_cols=116 Identities=20% Similarity=0.172 Sum_probs=81.2
Q ss_pred EEEEEEc----cCCCCeEEEEecCCCCCCchhh---hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 26 KIFYRTY----GRGPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 26 ~i~y~~~----G~~~p~vvllHG~~~~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
.++|... .++..||+|--|.-++.+.+.. ++-.++.. .+--++-.++|-+|+
T Consensus 66 ~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---------------------~~AllVFaEHRyYGe 124 (492)
T KOG2183|consen 66 DQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPE---------------------LKALLVFAEHRYYGE 124 (492)
T ss_pred eeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHh---------------------hCceEEEeehhcccc
Confidence 4455443 2343459999999888766543 33333332 266789999999999
Q ss_pred CCCCCCC--------CCCCHHHHHHHHHHHHHHhCC------ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 99 SSVPVKK--------TEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 99 S~~~~~~--------~~~~~~~~~~dl~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
|-+--.. ...+.++...|..+++.++.- .+|+.+|.|+|||+|..+=.+||+.|.|...-+.+.
T Consensus 125 S~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 125 SLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred CCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 9542221 234567777788888887742 379999999999999999999999988876655543
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0028 Score=52.43 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCc----ccceEEEeccCC
Q 015550 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTG 162 (405)
Q Consensus 111 ~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 162 (405)
..+.+.+...++.. ...+++++|||+||.+|..++..... ++..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 33445555555443 56789999999999999999888654 567788888764
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.019 Score=51.80 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=31.5
Q ss_pred cEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 128 QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 128 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.-+|.|.|+||.+++..+..+|+++-.++..++.
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 4689999999999999999999999999988876
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.011 Score=59.56 Aligned_cols=79 Identities=16% Similarity=0.059 Sum_probs=46.9
Q ss_pred CCeEEEEecCC----CCCCCCCCCCC-CCCCHHHHHH---HHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC--Ccc
Q 015550 84 AGIEVCAFDNR----GMGRSSVPVKK-TEYTTKIMAK---DVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PER 151 (405)
Q Consensus 84 ~g~~Vi~~D~~----G~G~S~~~~~~-~~~~~~~~~~---dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~ 151 (405)
+++-|+.+++| |+-.+...... ..+-+.|+.. .+.+-|.++| .++|.|+|||.||..+..+...- ...
T Consensus 155 ~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L 234 (535)
T PF00135_consen 155 KDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGL 234 (535)
T ss_dssp HTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTS
T ss_pred CCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccc
Confidence 38999999998 44333222211 2344444443 3444444554 35799999999999888777662 246
Q ss_pred cceEEEeccCC
Q 015550 152 VLSLALLNVTG 162 (405)
Q Consensus 152 v~~lvl~~~~~ 162 (405)
+.++|+.++..
T Consensus 235 F~raI~~SGs~ 245 (535)
T PF00135_consen 235 FHRAILQSGSA 245 (535)
T ss_dssp BSEEEEES--T
T ss_pred ccccccccccc
Confidence 99999999854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.28 Score=43.30 Aligned_cols=77 Identities=19% Similarity=0.252 Sum_probs=51.0
Q ss_pred chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHH----HHHHh--
Q 015550 51 AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIA----LMDHL-- 124 (405)
Q Consensus 51 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~----~l~~l-- 124 (405)
.|+.+.+.|++ +||.|++.=+.- .++-...|+.+.. .++.+
T Consensus 35 tYr~lLe~La~----------------------~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~ 81 (250)
T PF07082_consen 35 TYRYLLERLAD----------------------RGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQK 81 (250)
T ss_pred HHHHHHHHHHh----------------------CCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 58888999988 599999976631 2233333333322 22222
Q ss_pred --CC----ccEEEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 125 --GW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 125 --~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
+. -+++-+|||+|+-+-+.+...++..-++-|+++-
T Consensus 82 ~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 82 RGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred hcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 22 2678899999999988888777655577788773
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.015 Score=49.49 Aligned_cols=78 Identities=21% Similarity=0.200 Sum_probs=48.4
Q ss_pred CCeEEEEecCCC---CCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc--ccceEEE
Q 015550 84 AGIEVCAFDNRG---MGRSSVPVKKTEYTTKIMAKDV-IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLAL 157 (405)
Q Consensus 84 ~g~~Vi~~D~~G---~G~S~~~~~~~~~~~~~~~~dl-~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 157 (405)
.||.|+..+.-- +-.+...+.+...+..+.+.-+ ..++.-...+.+.++.||+||...+.+..++|+ +|.++.|
T Consensus 143 ~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aial 222 (297)
T KOG3967|consen 143 EGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIAL 222 (297)
T ss_pred cCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEe
Confidence 499999887531 1112111211122333333322 233333456789999999999999999999985 5777777
Q ss_pred eccC
Q 015550 158 LNVT 161 (405)
Q Consensus 158 ~~~~ 161 (405)
-+++
T Consensus 223 TDs~ 226 (297)
T KOG3967|consen 223 TDSA 226 (297)
T ss_pred eccc
Confidence 7765
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.18 Score=50.38 Aligned_cols=78 Identities=17% Similarity=0.113 Sum_probs=55.7
Q ss_pred CCeEEEEecCCCCCCCCCCC---C---CCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVPV---K---KTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~---~---~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
+|+-.-....||=|.-.... + ....++.++++....+++.= ..+.++++|-|.||++.-..+.+.|+.++++
T Consensus 476 RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~i 555 (682)
T COG1770 476 RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGI 555 (682)
T ss_pred CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhhe
Confidence 58877777778866543211 1 12346666666666555532 2247999999999999999999999999999
Q ss_pred EEeccC
Q 015550 156 ALLNVT 161 (405)
Q Consensus 156 vl~~~~ 161 (405)
|+--|.
T Consensus 556 iA~VPF 561 (682)
T COG1770 556 IAQVPF 561 (682)
T ss_pred eecCCc
Confidence 987765
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0068 Score=49.12 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
...+.+.++++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4455666666666657899999999999999988763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.021 Score=55.03 Aligned_cols=105 Identities=21% Similarity=0.139 Sum_probs=64.2
Q ss_pred CCCeEEEEecCCCC---CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCC-eEEEEecCC----CCC-CCCCC---
Q 015550 35 GPTKVILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNR----GMG-RSSVP--- 102 (405)
Q Consensus 35 ~~p~vvllHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g-~~Vi~~D~~----G~G-~S~~~--- 102 (405)
+.|++|+|||.+.. ......--..|++ +| +-|+.+++| |+= .|...
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~----------------------~g~vVvVSvNYRLG~lGfL~~~~~~~~~ 150 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGSALAA----------------------RGDVVVVSVNYRLGALGFLDLSSLDTED 150 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChHHHHh----------------------cCCEEEEEeCcccccceeeehhhccccc
Confidence 45899999997532 2221122244555 36 899999987 221 11111
Q ss_pred CCCCCCCHHHH---HHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccCC
Q 015550 103 VKKTEYTTKIM---AKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTG 162 (405)
Q Consensus 103 ~~~~~~~~~~~---~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 162 (405)
......-+.|+ .+.+.+-|+++|- ++|.|+|+|.||+.++.+.+. |. .+.++|+.++..
T Consensus 151 ~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 151 AFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 00011233333 3566677777764 579999999999998887664 43 477888888764
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0074 Score=59.53 Aligned_cols=54 Identities=17% Similarity=0.173 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCC---------------cccceEEEeccCCCC
Q 015550 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP---------------ERVLSLALLNVTGGG 164 (405)
Q Consensus 111 ~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p---------------~~v~~lvl~~~~~~~ 164 (405)
+++-..+..+++.. +-++|+|+||||||.+++.+..... ..|++.|.++++..+
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 33444444444432 3579999999999999998876421 248899999987433
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.039 Score=46.50 Aligned_cols=55 Identities=25% Similarity=0.270 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhC-----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 110 TKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
-++-+.++..+++.|. ..++.++|||+|+.++-..+...+..+..+|++++++.+
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 4556677777877663 237899999999999988888767789999999988644
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.043 Score=52.80 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=63.4
Q ss_pred CeEEEEecCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCC-------ccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 85 GIEVCAFDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALMDHLGW-------KQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l~~l~~-------~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
|-.|+.+++|-+|.|.+.... ...+.++...|+.++|+++.. .+++.+|-|+-|.++..+=..+|+.+
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 789999999999998543321 134677888999999988732 28999999999999999999999999
Q ss_pred ceEEEeccCC
Q 015550 153 LSLALLNVTG 162 (405)
Q Consensus 153 ~~lvl~~~~~ 162 (405)
.+-|.-+.+.
T Consensus 198 ~GsvASSapv 207 (514)
T KOG2182|consen 198 VGSVASSAPV 207 (514)
T ss_pred eeecccccce
Confidence 8888777654
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.011 Score=56.54 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=44.3
Q ss_pred EEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc--------ccceEEEec
Q 015550 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLN 159 (405)
Q Consensus 88 Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~ 159 (405)
-..+|+| .|.......+..+..+..-++.....-|-+|++|++||||+.+.+.+...+++ .|++.+-++
T Consensus 146 ga~YDwR---ls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig 222 (473)
T KOG2369|consen 146 GAPYDWR---LSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIG 222 (473)
T ss_pred ccccchh---hccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccC
Confidence 4567776 22222221122333344444444444466899999999999999999988876 366777666
Q ss_pred cC
Q 015550 160 VT 161 (405)
Q Consensus 160 ~~ 161 (405)
.+
T Consensus 223 ~p 224 (473)
T KOG2369|consen 223 AP 224 (473)
T ss_pred ch
Confidence 54
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.38 Score=51.25 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=64.9
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC-CCCCCCCCCCHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVPVKKTEYTTKIM 113 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S-~~~~~~~~~~~~~~ 113 (405)
..|++.|+|..-+......+++..|.- |-+|.- .... ..-+++..
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle~--------------------------------PaYglQ~T~~v--P~dSies~ 2167 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLEI--------------------------------PAYGLQCTEAV--PLDSIESL 2167 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcCC--------------------------------cchhhhccccC--CcchHHHH
Confidence 456799999988877767666665532 222221 1111 13378888
Q ss_pred HHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCC--cccceEEEeccCC
Q 015550 114 AKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 162 (405)
++-.+.-++.+.. .+..++|+|+|+.++..+|.... +....+|++++.+
T Consensus 2168 A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2168 AAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 8877777777754 58999999999999999987643 3456699998763
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.026 Score=49.74 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=34.4
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhC----CcccceEEEeccCC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTG 162 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~ 162 (405)
+..+++..+ +++.+.|||.||.+|..+|... .++|.++...++++
T Consensus 75 l~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 75 LKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 334444444 4699999999999999998874 35789999999875
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.071 Score=51.61 Aligned_cols=131 Identities=14% Similarity=0.042 Sum_probs=75.8
Q ss_pred EEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec-CCCCCCCCC
Q 015550 27 IFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD-NRGMGRSSV 101 (405)
Q Consensus 27 i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D-~~G~G~S~~ 101 (405)
.+|.-.++ ..|.++.+.|.+|++..|..+.+.=..+.... .....+..+.-. -..-.++-+| .-|.|.|..
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~---~~P~~~~NP~SW-~~~adLvFiDqPvGTGfS~a 163 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSG---TSPSYPDNPGSW-LDFADLVFIDQPVGTGFSRA 163 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCC---CCCCCCCCcccc-ccCCceEEEecCcccCcccc
Confidence 44444453 35788999999999988876643221111100 000000000000 0245789999 569999975
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh-------CC--ccEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccC
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHL-------GW--KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVT 161 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l-------~~--~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 161 (405)
......-++....+|+..+.+.+ .- .+.+|+|.|+||.-+..+|..--+ ..++++++.+.
T Consensus 164 ~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 164 LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 22222445556666666655543 22 489999999999998888865433 35666666654
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.035 Score=49.22 Aligned_cols=24 Identities=33% Similarity=0.307 Sum_probs=20.3
Q ss_pred CCccEEEEEEChhHHHHHHHHHhC
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 446899999999999999988753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.22 Score=49.53 Aligned_cols=78 Identities=13% Similarity=0.033 Sum_probs=55.4
Q ss_pred CCeEEEEecCCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceE
Q 015550 84 AGIEVCAFDNRGMGRSSVPVK------KTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~------~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l 155 (405)
.|+-...-|.||=|.-..... +...+++++..-+.-+++.= ...+..+.|.|.||.++...+.++|+.+.++
T Consensus 498 ~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~av 577 (712)
T KOG2237|consen 498 RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAV 577 (712)
T ss_pred cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhh
Confidence 499889999999775532211 12335555555555555421 3457999999999999999999999999888
Q ss_pred EEeccC
Q 015550 156 ALLNVT 161 (405)
Q Consensus 156 vl~~~~ 161 (405)
|+--|.
T Consensus 578 ia~Vpf 583 (712)
T KOG2237|consen 578 IAKVPF 583 (712)
T ss_pred hhcCcc
Confidence 876554
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.045 Score=48.75 Aligned_cols=47 Identities=13% Similarity=0.301 Sum_probs=37.9
Q ss_pred HHHHHHHHH-h--CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 115 KDVIALMDH-L--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~-l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+.+.-+++. . ..++..++|||+||.+++.....+|+.+...++++|.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 344444443 2 3356899999999999999999999999999999987
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.074 Score=51.23 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh---C-----CcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~ 161 (405)
.++.+.+.+++......++++.|||+||.+|..+|.. + .+++.+++..+.+
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 3445555666666555689999999999999987652 1 1234556666654
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.041 Score=42.59 Aligned_cols=38 Identities=13% Similarity=0.239 Sum_probs=23.9
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhh
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQ 55 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~ 55 (405)
-.++++|..|||...-+ +..||||+||++++-..|.++
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 34778999999966543 334799999999988776654
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.084 Score=51.00 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh---C-----CcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~ 161 (405)
.++.+.+.++++.....++++.|||+||.+|..+|.. + ..++.++...+.+
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 3456677777777766789999999999999998752 1 2345566666654
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.081 Score=44.95 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=43.9
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCCccEEEEEEChhHHHHHHHHHh------CCcccce
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAM------VPERVLS 154 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~~------~p~~v~~ 154 (405)
...+..+++|-..... ....+..+-++++...++ .-.-.+++|+|+|+|+.++..++.. ..++|.+
T Consensus 39 ~~~~~~V~YpA~~~~~----~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~a 114 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN----SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAA 114 (179)
T ss_dssp EEEEEE--S---SCGG----SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEE
T ss_pred eeEEEecCCCCCCCcc----cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEE
Confidence 5777778877432211 011233444444444444 3345689999999999999999877 2367999
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
+++++-+
T Consensus 115 vvlfGdP 121 (179)
T PF01083_consen 115 VVLFGDP 121 (179)
T ss_dssp EEEES-T
T ss_pred EEEecCC
Confidence 9999865
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.072 Score=50.85 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHh
Q 015550 111 KIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+++..++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45556677777665433 68999999999999998864
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.075 Score=50.14 Aligned_cols=105 Identities=14% Similarity=0.034 Sum_probs=77.0
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC-CCCCHH
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK-TEYTTK 111 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~-~~~~~~ 111 (405)
+...|+|+..-|.+....-.. .+++..+ +-+-+.+++|-+|.|.+.+.. ...+++
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r---~Ept~Ll---------------------d~NQl~vEhRfF~~SrP~p~DW~~Lti~ 115 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRR---SEPTQLL---------------------DGNQLSVEHRFFGPSRPEPADWSYLTIW 115 (448)
T ss_pred CCCCCeEEEecCcccccCccc---cchhHhh---------------------ccceEEEEEeeccCCCCCCCCcccccHh
Confidence 345677888888876543222 1232221 456788999999999765542 456889
Q ss_pred HHHHHHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 112 IMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 112 ~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+-+.|...+++.+. ..+.+--|-|=||+.++.+=.-||+.|++.|.--.+
T Consensus 116 QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 116 QAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred HhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 99999998888773 357899999999999998888899999988865444
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.086 Score=50.28 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHh
Q 015550 116 DVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 116 dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 147 (405)
.+..+++..... +|++.|||+||.+|+.+|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444444333 49999999999999999864
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.15 Score=43.98 Aligned_cols=39 Identities=15% Similarity=0.078 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhC
Q 015550 110 TKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
..|..+....++++.+. ++++|+|||.|+++..++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 45555566666666643 5899999999999999998764
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.36 Score=48.85 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=45.1
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHHHH---HHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC--Ccccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKD---VIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~d---l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~ 153 (405)
..-|+.+.+| |+...........+-+.|+... +.+-|...| .++|.++|||.||..+..+.... ...+.
T Consensus 144 ~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~ 223 (545)
T KOG1516|consen 144 DVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFH 223 (545)
T ss_pred CEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHH
Confidence 6777777776 3322211111234455555444 444444554 46899999999999987776531 13466
Q ss_pred eEEEeccC
Q 015550 154 SLALLNVT 161 (405)
Q Consensus 154 ~lvl~~~~ 161 (405)
+.|.+++.
T Consensus 224 ~aI~~SG~ 231 (545)
T KOG1516|consen 224 KAISMSGN 231 (545)
T ss_pred HHHhhccc
Confidence 66666655
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.14 Score=48.13 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+.+..+++..+.. ++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345555666655433 59999999999999998865
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.07 Score=50.19 Aligned_cols=87 Identities=17% Similarity=0.265 Sum_probs=50.1
Q ss_pred CCeEEEEecCCC-CCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC-CCCCHHHH
Q 015550 36 PTKVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK-TEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~-~~~~~~~~ 113 (405)
+..||+.||+.+ +...|...+........ +. .+..+|+-.....+.. -.+==+..
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p--------------------~~---~iv~~g~~~~~~~T~~Gv~~lG~Rl 136 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMP--------------------DK---LIVVRGKMNNMCQTFDGVDVLGERL 136 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCC--------------------cc---eEeeeccccchhhccccceeeeccc
Confidence 347999999988 56677777766665211 23 3333333222211111 11112334
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHH
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a 145 (405)
++++.+.+....++++..+|||+||.++..+.
T Consensus 137 a~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 137 AEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred HHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 55555555555578999999999999875543
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.3 Score=46.61 Aligned_cols=36 Identities=25% Similarity=0.236 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEEChhHHHHHHHHHh
Q 015550 112 IMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 112 ~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
++.+.+..+++... ..++++.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666666552 1379999999999999988854
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.19 Score=49.10 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHH
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 146 (405)
..+...+.++++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345566667777666678999999999999999874
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.25 Score=40.74 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=65.6
Q ss_pred CEEEEEEEccCCCCeEEEEecCCCCCCchhhh--HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 24 g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
+..+.+..+|.+..+||+.+--++....|..+ +..|+..... -..+.++++ |-..-+-
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~------------------G~vQlft~~--gldsESf 73 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEE------------------GLVQLFTLS--GLDSESF 73 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhc------------------CcEEEEEec--ccchHhH
Confidence 45677888898655577777666665555432 2223221000 134555555 2221110
Q ss_pred CCCCCCCCHHHHHH---HHH-HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 102 PVKKTEYTTKIMAK---DVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 102 ~~~~~~~~~~~~~~---dl~-~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
-.. ..+..+.++ ... -+++..-..+..+-|.||||..|..+..++|+...++|.+++.
T Consensus 74 ~a~--h~~~adr~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 74 LAT--HKNAADRAERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred hhh--cCCHHHHHHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 000 112222222 222 2233332356778899999999999999999999999999876
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.25 Score=47.22 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+.+..+++...- .+|++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455666665543 269999999999999998864
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.24 Score=33.87 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=19.2
Q ss_pred ccccCCEEEEEEEc-c-C-------CCCeEEEEecCCCCCCchh
Q 015550 19 ALNDNGIKIFYRTY-G-R-------GPTKVILITGLAGTHDAWG 53 (405)
Q Consensus 19 ~~~~~g~~i~y~~~-G-~-------~~p~vvllHG~~~~~~~~~ 53 (405)
+.+-||+-|....- . . .+|+|++.||+.++++.|-
T Consensus 17 V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 17 VTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp EE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 35668887765332 2 2 3578999999999999883
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.52 E-value=0.31 Score=47.62 Aligned_cols=35 Identities=31% Similarity=0.361 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+++..+++...- .+|++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 44455556655532 268999999999999988764
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.33 Score=47.53 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEEChhHHHHHHHHHh
Q 015550 112 IMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 112 ~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+..+++..+++... ..++++.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566667776553 2369999999999999988854
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.55 Score=44.07 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=29.5
Q ss_pred CCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccC
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 161 (405)
|.+|+.|+|||+|+.+.......-.+ .|+.+++++.+
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 66799999999999998776654333 38999999876
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.35 Score=47.42 Aligned_cols=35 Identities=29% Similarity=0.309 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+...+..+++.... .+|++.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455566655432 479999999999999998853
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.39 Score=46.96 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEEChhHHHHHHHHHh
Q 015550 113 MAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 113 ~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.+.+..+++.... .+|++.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34455555555432 379999999999999998854
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.4 Score=47.02 Aligned_cols=35 Identities=31% Similarity=0.353 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhC-----C-ccEEEEEEChhHHHHHHHHH
Q 015550 112 IMAKDVIALMDHLG-----W-KQAHVFGHSMGAMIACKLAA 146 (405)
Q Consensus 112 ~~~~dl~~~l~~l~-----~-~~v~lvGhS~Gg~ia~~~a~ 146 (405)
++.+.+..+++..+ . -+|++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34455556665552 1 36999999999999998885
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=89.86 E-value=1.6 Score=38.44 Aligned_cols=77 Identities=19% Similarity=0.175 Sum_probs=47.2
Q ss_pred CeEEEEecCCCC-CC-CCCCCCCCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhC---C--c-ccce
Q 015550 85 GIEVCAFDNRGM-GR-SSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMV---P--E-RVLS 154 (405)
Q Consensus 85 g~~Vi~~D~~G~-G~-S~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~---p--~-~v~~ 154 (405)
|+.+..+++|.. +- +.........++.+=++.+.+.++.. .-++++++|+|+|+.++...+.+. + . ....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 677888888861 11 00111112446666666777666652 236899999999999998877653 1 1 2335
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
.|+++-+
T Consensus 82 fVl~gnP 88 (225)
T PF08237_consen 82 FVLIGNP 88 (225)
T ss_pred EEEecCC
Confidence 6666644
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.67 E-value=0.54 Score=44.28 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677888888888876789999999999999988864
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.63 E-value=0.79 Score=45.69 Aligned_cols=21 Identities=29% Similarity=0.437 Sum_probs=18.7
Q ss_pred ccEEEEEEChhHHHHHHHHHh
Q 015550 127 KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999998765
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=88.59 E-value=2.6 Score=41.77 Aligned_cols=77 Identities=17% Similarity=0.033 Sum_probs=52.6
Q ss_pred CeEEEEecCCCCCCCCCC-CCCCCCC-----------HHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCC
Q 015550 85 GIEVCAFDNRGMGRSSVP-VKKTEYT-----------TKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~-~~~~~~~-----------~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
||.+..-|- ||..+... ......+ +.+++.-..++++.+ ..+.-+..|.|.||.-++..|+++|
T Consensus 59 G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP 137 (474)
T PF07519_consen 59 GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYP 137 (474)
T ss_pred CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhCh
Confidence 999999995 66555321 1101122 222333334444443 3456899999999999999999999
Q ss_pred cccceEEEeccCC
Q 015550 150 ERVLSLALLNVTG 162 (405)
Q Consensus 150 ~~v~~lvl~~~~~ 162 (405)
+..++++.-+|..
T Consensus 138 ~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 138 EDFDGILAGAPAI 150 (474)
T ss_pred hhcCeEEeCCchH
Confidence 9999999988863
|
It also includes several bacterial homologues of unknown function. |
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.93 E-value=28 Score=32.87 Aligned_cols=65 Identities=3% Similarity=-0.014 Sum_probs=49.0
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhhcCCC
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~~~~~ 325 (405)
..+.+.+.+..|.++|....+++.+.. .-+.+-+-+.+ -|..++. .|..+.+...+|++......
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccccc
Confidence 467888999999999999888886544 12333334444 7888765 79999999999999987644
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.72 E-value=3.2 Score=38.81 Aligned_cols=63 Identities=10% Similarity=0.034 Sum_probs=46.7
Q ss_pred hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
.++.+|-.++.+..|...++..+....+.+....-+..+|+ .|...-. -+.+.|..|++....
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNRFQM 389 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHHHhc
Confidence 45668999999999999999999999998855667888898 8876443 344455555555443
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=84.48 E-value=2.6 Score=35.90 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=42.8
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHH---HhCC-CeEEEEcCC-CccccccC---HHHHHHHHHHHHHh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAE---KLYP-VARMIDLPG-GHLVSHER---TEEVNQALIDLIKA 320 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~---~l~~-~~~l~~~~g-gH~~~~e~---p~~v~~~i~~fl~~ 320 (405)
++++|-|-|+.|.|+.+-....-.+ .+.+ ....++.+| ||+..+.- .+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 3778889999999998765544444 3322 234556678 99887763 36899999999975
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.72 E-value=2.2 Score=42.38 Aligned_cols=37 Identities=30% Similarity=0.399 Sum_probs=26.5
Q ss_pred CccEEEEEEChhHHHHHHHHHh-----CCc------ccceEEEeccCC
Q 015550 126 WKQAHVFGHSMGAMIACKLAAM-----VPE------RVLSLALLNVTG 162 (405)
Q Consensus 126 ~~~v~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~ 162 (405)
.++++.+||||||.++=.+... .|+ .-.++++++.+.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3589999999999887666543 232 356788888764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 405 | ||||
| 3e3a_A | 293 | The Structure Of Rv0554 From Mycobacterium Tubercul | 3e-11 | ||
| 3ans_A | 336 | Human Soluble Epoxide Hydrolase In Complex With A S | 7e-11 | ||
| 3pdc_A | 344 | Crystal Structure Of Hydrolase Domain Of Human Solu | 8e-11 | ||
| 1s8o_A | 555 | Human Soluble Epoxide Hydrolase Length = 555 | 1e-10 | ||
| 1cqz_A | 554 | Crystal Structure Of Murine Soluble Epoxide Hydrola | 1e-09 | ||
| 3qyj_A | 291 | Crystal Structure Of Alr0039, A Putative AlphaBETA | 1e-08 | ||
| 2zjf_A | 362 | Crystal Structure Of Mycobacterium Tuberculosis Epo | 3e-08 | ||
| 2e3j_A | 356 | The Crystal Structure Of Epoxide Hydrolase B (Rv193 | 3e-08 | ||
| 3b12_A | 304 | Crystal Structure Of The Fluoroacetate Dehalogenase | 1e-07 | ||
| 1y37_A | 304 | Structure Of Fluoroacetate Dehalogenase From Burkho | 2e-07 | ||
| 4dgq_A | 280 | Crystal Structure Of Non-Heme Chloroperoxidase From | 2e-07 | ||
| 3om8_A | 266 | The Crystal Structure Of A Hydrolase From Pseudomon | 3e-07 | ||
| 4f0j_A | 315 | Crystal Structure Of A Probable Hydrolytic Enzyme ( | 5e-07 | ||
| 2xua_A | 266 | Crystal Structure Of The Enol-Lactonase From Burkho | 2e-06 | ||
| 3hea_A | 271 | The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS E | 3e-06 | ||
| 3hi4_A | 271 | Switching Catalysis From Hydrolysis To Perhydrolysi | 3e-06 | ||
| 1q0r_A | 298 | Crystal Structure Of Aclacinomycin Methylesterase ( | 4e-06 | ||
| 1va4_A | 279 | Pseudomonas Fluorescens Aryl Esterase Length = 279 | 4e-06 | ||
| 3ia2_A | 271 | Pseudomonas Fluorescens Esterase Complexed To The R | 4e-06 | ||
| 3t4u_A | 271 | L29i Mutation In An Aryl Esterase From Pseudomonas | 4e-06 | ||
| 3r3v_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 7e-06 | ||
| 3r3u_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 9e-06 | ||
| 3r41_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 1e-05 | ||
| 3r3y_A | 306 | Crystal Structure Of The Fluoroacetate Dehalogenase | 1e-05 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 3e-05 | ||
| 1c4x_A | 285 | 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase | 4e-05 | ||
| 1azw_A | 313 | Proline Iminopeptidase From Xanthomonas Campestris | 5e-05 | ||
| 2ock_A | 254 | Crystal Structure Of Valacyclovir Hydrolase D123n M | 6e-05 | ||
| 2og1_A | 286 | Crystal Structure Of Bphd, A C-C Hydrolase From Bur | 6e-05 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 6e-05 | ||
| 2ocg_A | 254 | Crystal Structure Of Human Valacyclovir Hydrolase L | 7e-05 | ||
| 2rht_A | 283 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 1e-04 | ||
| 2puh_A | 286 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 1e-04 | ||
| 2ocl_A | 254 | Crystal Structure Of Valacyclovir Hydrolase S122a M | 2e-04 | ||
| 1hkh_A | 279 | Unligated Gamma Lactamase From An Aureobacterium Sp | 4e-04 | ||
| 2yys_A | 286 | Crystal Structure Of The Proline Iminopeptidase-Rel | 4e-04 | ||
| 1ehy_A | 294 | X-Ray Structure Of The Epoxide Hydrolase From Agrob | 4e-04 | ||
| 3v1k_A | 286 | Crystal Structure Of The H265q Mutant Of A C-C Hydr | 4e-04 | ||
| 1a8s_A | 273 | Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | 5e-04 | ||
| 1qtr_A | 317 | Crystal Structure Analysis Of The Prolyl Aminopepti | 5e-04 | ||
| 3vdx_A | 456 | Structure Of A 16 Nm Protein Cage Designed By Fusin | 8e-04 |
| >pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis Length = 293 | Back alignment and structure |
|
| >pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A Synthetic Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor Length = 344 | Back alignment and structure |
|
| >pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase Length = 555 | Back alignment and structure |
|
| >pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase. Length = 554 | Back alignment and structure |
|
| >pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA HYDROLASE FROM Nostoc Sp Pcc 7120. Length = 291 | Back alignment and structure |
|
| >pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide Hydrolase B Complexed With An Inhibitor Length = 362 | Back alignment and structure |
|
| >pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From Mycobacterium Tuberculosis At 2.1 Angstrom Length = 356 | Back alignment and structure |
|
| >pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104 Mutant From Burkholderia Sp. Fa1 In Complex With Fluoroacetate Length = 304 | Back alignment and structure |
|
| >pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia Sp. Fa1 Length = 304 | Back alignment and structure |
|
| >pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From Burkholderia Cenocepacia Length = 280 | Back alignment and structure |
|
| >pdb|3OM8|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Aeruginosa Pa01 Length = 266 | Back alignment and structure |
|
| >pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053) From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution Length = 315 | Back alignment and structure |
|
| >pdb|2XUA|A Chain A, Crystal Structure Of The Enol-Lactonase From Burkholderia Xenovorans Lb400 Length = 266 | Back alignment and structure |
|
| >pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE Length = 271 | Back alignment and structure |
|
| >pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P. Fluorescens Esterase Length = 271 | Back alignment and structure |
|
| >pdb|1Q0R|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (Rdmc) With Bound Product Analogue, 10- Decarboxymethylaclacinomycin T (Dcmat) Length = 298 | Back alignment and structure |
|
| >pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase Length = 279 | Back alignment and structure |
|
| >pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The R-Enantiomer Of A Sulfonate Transition State Analog Length = 271 | Back alignment and structure |
|
| >pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas Fluorescens Leads To Unique Peptide Flip And Increased Activity Length = 271 | Back alignment and structure |
|
| >pdb|3R3V|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - Asp110asnFLUOROACETATE Length = 306 | Back alignment and structure |
|
| >pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - WtAPO Length = 306 | Back alignment and structure |
|
| >pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - His280asnAPO Length = 306 | Back alignment and structure |
|
| >pdb|3R3Y|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase Rpa1163 - His280asnFLUOROACETATE Length = 306 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd) From Rhodococcus Sp. Strain Rha1 Length = 285 | Back alignment and structure |
|
| >pdb|1AZW|A Chain A, Proline Iminopeptidase From Xanthomonas Campestris Pv. Citri Length = 313 | Back alignment and structure |
|
| >pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant Length = 254 | Back alignment and structure |
|
| >pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase Length = 254 | Back alignment and structure |
|
| >pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With 3-Cl Hopda Length = 283 | Back alignment and structure |
|
| >pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With Its Substrate Hopda Length = 286 | Back alignment and structure |
|
| >pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant Length = 254 | Back alignment and structure |
|
| >pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species Length = 279 | Back alignment and structure |
|
| >pdb|2YYS|A Chain A, Crystal Structure Of The Proline Iminopeptidase-Related Protein Ttha1809 From Thermus Thermophilus Hb8 Length = 286 | Back alignment and structure |
|
| >pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From Agrobacterium Radiobacter Ad1 Length = 294 | Back alignment and structure |
|
| >pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400. Length = 286 | Back alignment and structure |
|
| >pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | Back alignment and structure |
|
| >pdb|1QTR|A Chain A, Crystal Structure Analysis Of The Prolyl Aminopeptidase From Serratia Marcescens Length = 317 | Back alignment and structure |
|
| >pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing Symmetric Oligomeric Domains Length = 456 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 1e-44
Identities = 75/300 (25%), Positives = 109/300 (36%), Gaps = 42/300 (14%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGD 81
I + Y G G V+ I G G W P Q+
Sbjct: 31 RVINLAYDDNGTGDP-VVFIAGRGGAGRTWHPHQVPAFLA-------------------- 69
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
AG FDNRG+G + +TT+ M D AL++ L A V G SMGA IA
Sbjct: 70 --AGYRCITFDNRGIGATENA---EGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIA 124
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+L + PE V S L+ T G + + + P A L ++S
Sbjct: 125 QELMVVAPELVSSAVLMA-TRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFS 183
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
++ L + V A+ S ++S G Q+ + I +
Sbjct: 184 RKTLNDDVAVGDWIAMF--------SMWPIKSTPGLRCQLDCAPQTNRLP-AYRNIAAP- 233
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320
V VI DV+ R +A+ L P R + +P GHL ER E VN A++ +
Sbjct: 234 --VLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFFAS 290
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 7e-40
Identities = 69/300 (23%), Positives = 109/300 (36%), Gaps = 48/300 (16%)
Query: 23 NGIKIFYRTYGRG--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G + YR G P + L + T W QL L
Sbjct: 13 DGASLAYRLDGAAEKPL-LALSNSIGTTLHMWDAQLPALT-------------------- 51
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V +D RG G SSVP YT + +DV+ L+D L ++AH G S+G ++
Sbjct: 52 ---RHFRVLRYDARGHGASSVP--PGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIV 106
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
LA P+R+ L L N T IA +A+ + AA L +
Sbjct: 107 GQWLALHAPQRIERLVLAN-TSAWL---GPAAQWDERIA-AVLQAEDMSETAAGFLGNWF 161
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
LE R + + + + AT + +G G A + + I
Sbjct: 162 PPALLE-------RAEPVVERFRAMLMAT---NRHGLAGSFAAVRDTDLRA-QLARIERP 210
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320
VI G +D + + +A + AR++ LP HL + E + A++ + A
Sbjct: 211 ---TLVIAGAYDTVTAASHGELIAASI-AGARLVTLPAVHLSNVEFPQAFEGAVLSFLGA 266
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 143 bits (361), Expect = 8e-40
Identities = 52/316 (16%), Positives = 102/316 (32%), Gaps = 44/316 (13%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQL-KGLAGTDKPNDDDETILQDSVES 79
++++ +G P ++L+ G + W + + LA
Sbjct: 9 GDVELWSDDFGDPADPA-LLLVMGGNLSALGWPDEFARRLAD------------------ 49
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVK-KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
G+ V +D+R GRS+ Y +A D +A++D G +AHV G SMGA
Sbjct: 50 ----GGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGA 105
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
I +A +R+ SL +L G ++ +
Sbjct: 106 TITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALM 165
Query: 199 HYSQEYLEEYVGSSTRRAILY------------QEYVKGISATGMQSNYGFDGQIHACWM 246
+ E V + + + +
Sbjct: 166 NQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLP 225
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
+++ + VI HD IA + + LA + P AR+ ++PG GH +
Sbjct: 226 PPSRAAELREVTVP---TLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSS 281
Query: 306 RTEEVNQALIDLIKAS 321
+ + ++ +++
Sbjct: 282 VHGPLAEVILAHTRSA 297
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 9e-40
Identities = 55/297 (18%), Positives = 101/297 (34%), Gaps = 58/297 (19%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGT-HDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
NG+++ Y+ G G V+L+ G+ G+ +GPQLK L
Sbjct: 10 NGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNK-------------------- 49
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKK-TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V A+D RG G S P + + AKD + LM L +K+ + G S G +
Sbjct: 50 --KLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGIT 107
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A AA P + + + + E V +
Sbjct: 108 ALIAAAKYPSYIHKMVIWGANAYVTD----------------EDSMIYEGIRDVSKWSER 151
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+++ LE G +++V GI + + + ++
Sbjct: 152 TRKPLEALYGYDYFAR-TCEKWVDGIRQFKHLPDGNI------------CRHLLPRVQCP 198
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
++HG D + +A + + + +R+ +P H + +E N+ D
Sbjct: 199 ---ALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAED 251
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-39
Identities = 40/303 (13%), Positives = 85/303 (28%), Gaps = 41/303 (13%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I Y + G G +I + GL+ + + L+
Sbjct: 9 TRSNISYFSIGSGTP-IIFLHGLSLDKQSTCLFFEPLSNV-------------------- 47
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
+ D GMG S + ++ + A+ + +G ++ ++GHS G +A
Sbjct: 48 -GQYQRIYLDLPGMGNSDPI--SPSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQ 104
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
+A + ++ L + L + + E A
Sbjct: 105 AIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIIN 164
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ +Y I + + F Q+ + +K F
Sbjct: 165 NQ-------------AWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPF 211
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321
++ GR+D + +L ++ L GH + ++ E V +
Sbjct: 212 K--IMVGRNDQVVGYQEQLKLIN-HNENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDEL 268
Query: 322 EKK 324
Sbjct: 269 NSN 271
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 7e-39
Identities = 54/297 (18%), Positives = 101/297 (34%), Gaps = 43/297 (14%)
Query: 25 IKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84
+ + Y P V+LI+GL G+ W PQL L
Sbjct: 5 LSLSPPPYADAPV-VVLISGLGGSGSYWLPQLAVLE-----------------------Q 40
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
+V +D RG G + + + Y+ MA ++ + G + V GH++GA++ +L
Sbjct: 41 EYQVVCYDQRGTGNNPDTLAED-YSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQL 99
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
A P V L +N + + R + + Y ++
Sbjct: 100 ALDYPASVTVLISVN-GWLRI---NAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADW 155
Query: 205 LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264
+ R L E ++ Q +++A + IR V
Sbjct: 156 MAA------RAPRLEAEDALALAHF--QGKNNLLRRLNALKRADFSH-HADRIRCP---V 203
Query: 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320
+I D++ + L L P ++ + +P GH + E N L++ + +
Sbjct: 204 QIICASDDLLVPTACSSELHAAL-PDSQKMVMPYGGHACNVTDPETFNALLLNGLAS 259
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 7e-39
Identities = 67/298 (22%), Positives = 107/298 (35%), Gaps = 51/298 (17%)
Query: 23 NGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVE 78
NG ++ YR G P ++L L W PQ+ L+
Sbjct: 10 NGTELHYRIDGERHGNAPW-IVLSNSLGTDLSMWAPQVAALS------------------ 50
Query: 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
V +D RG G S P K YT + + DV+ LMD L +A+ G SMG
Sbjct: 51 -----KHFRVLRYDTRGHGHSEAP--KGPYTIEQLTGDVLGLMDTLKIARANFCGLSMGG 103
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
+ LAA +R+ +AL N T + R + A L
Sbjct: 104 LTGVALAARHADRIERVALCN-TAARIG-----SPEVWVPRAVKARTEGMHALADAVLPR 157
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
++ +Y+E R ++ T + G+ A + + I+
Sbjct: 158 WFTADYME-------REPVVLAMIRDVFVHTDKE---GYASNCEAIDAADLRP-EAPGIK 206
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALID 316
VI G HD+ A R LA+ + AR ++L H+ + ER + + ++D
Sbjct: 207 VP---ALVISGTHDLAATPAQGRELAQAI-AGARYVELDASHISNIERADAFTKTVVD 260
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 9e-39
Identities = 43/298 (14%), Positives = 85/298 (28%), Gaps = 30/298 (10%)
Query: 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+ K Y G GP + + + +D
Sbjct: 8 IKTPRGKFEYFLKGEGPP-LCVTHLYSEYNDNGNTFANPFT------------------- 47
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V + +G G S +EY+ KD+ A+ + L + GHS G M
Sbjct: 48 ----DHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGM 103
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A A E + + + K +
Sbjct: 104 LALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQE 163
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
+ E+ S +E +K ++ N + + ++ ++ ++
Sbjct: 164 ERKALSREWALMSFYSEEKLEEALKLPNSGKTVGN-RLNYFRQVEYKDYDVRQKLKFVKI 222
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
F + G+HDV ++ +A + P A + H E ++ NQ + D
Sbjct: 223 PSF---IYCGKHDVQCPYIFSCEIANLI-PNATLTKFEESNHNPFVEEIDKFNQFVND 276
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 2e-37
Identities = 66/304 (21%), Positives = 100/304 (32%), Gaps = 45/304 (14%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I ++Y +G G V+LI G + +W Q L
Sbjct: 11 TSIDLYYEDHGTGQP-VVLIHGFPLSGHSWERQSAALLD--------------------- 48
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V +D RG G+SS P T Y A D+ +++ L + A + G S G
Sbjct: 49 -AGYRVITYDRRGFGQSSQPT--TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVA 105
Query: 143 K-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTPEKRAAVDLDTHY 200
+ +++ R+ +A L A R A
Sbjct: 106 RYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFN 165
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ--KDIQTIR 258
L+E +G + +E V+ T GF A T DI I
Sbjct: 166 DFYNLDENLG-----TRISEEAVRNSWNTAASG--GFFAAA-AAPTTWYTDFRADIPRID 217
Query: 259 SAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
V ++HG D I R+ K P A +++ G H + EEVN AL+
Sbjct: 218 -----VPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL 272
Query: 316 DLIK 319
+
Sbjct: 273 AFLA 276
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 3e-36
Identities = 64/301 (21%), Positives = 102/301 (33%), Gaps = 33/301 (10%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I+++Y G G V+LI G +W Q + L
Sbjct: 9 NSTPIELYYEDQGSGQP-VVLIHGYPLDGHSWERQTRELLA------------------- 48
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V +D RG G SS T Y A D+ +++ L + + G SMG
Sbjct: 49 ---QGYRVITYDRRGFGGSSKV--NTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGE 103
Query: 141 ACK-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+ +A ERV LA L + E A D
Sbjct: 104 LARYVARYGHERVAKLAFLASLEPFLVQRD-----DNPEGVPQEVFDGIEAAAKGDRFAW 158
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
++ Y Y + + ++ V G + S + W+ D++ +R+
Sbjct: 159 FTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRS-DVEAVRA 217
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
AG ++HG D I I R + P A +++ G H + +EVN AL +
Sbjct: 218 AGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFL 277
Query: 319 K 319
Sbjct: 278 A 278
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-36
Identities = 46/297 (15%), Positives = 96/297 (32%), Gaps = 50/297 (16%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+ G P ++L+ G + W P + +
Sbjct: 53 RFGQTHVIASGPEDAPP-LVLLHGALFSSTMWYPNIADWS-------------------- 91
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+ A D G S+P + T A ++ + D+LG +++H+ G S+G +
Sbjct: 92 ---SKYRTYAVDIIGDKNKSIPENVS-GTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLH 147
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+PERV S A+L+ L + ++ +
Sbjct: 148 TMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTAS------NGVETFLNWMMN- 200
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ I +++ G+ N + + T +++++ R
Sbjct: 201 ---------DQNVLHPIFVKQFKAGVMWQDGSRNP---NPNADGFPYVFTDEELRSARVP 248
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+ ++ G H+VI A A P + GH++S E+ VN+ ++
Sbjct: 249 ---ILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMR 302
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 4e-36
Identities = 58/305 (19%), Positives = 100/305 (32%), Gaps = 43/305 (14%)
Query: 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
+G +I+Y+ +G G ++ G D+W Q+ LA
Sbjct: 6 RDGTQIYYKDWGSGQP-IVFSHGWPLNADSWESQMIFLAA-------------------- 44
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
G V A D RG GRSS P + A D+ L++HL + A +FG S G
Sbjct: 45 --QGYRVIAHDRRGHGRSSQP--WSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEV 100
Query: 142 CKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ RV L++ R + R+ + D
Sbjct: 101 ARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLAS 160
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT--QKDIQTIR 258
+ G+ + ++ GM + G T +D++ I
Sbjct: 161 GPFFGFNQPGAKSSAGMVDW-----FWLQGMAA--GHKNAYDCIKAFSETDFTEDLKKID 213
Query: 259 SAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
V V+HG D + I + + L + + G H ++ +++N L+
Sbjct: 214 -----VPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLL 268
Query: 316 DLIKA 320
IK
Sbjct: 269 AFIKG 273
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 6e-36
Identities = 55/307 (17%), Positives = 97/307 (31%), Gaps = 57/307 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I + R G GP ++ G+ + P + L+
Sbjct: 56 GRITLNVREKGSGPL-MLFFHGITSNSAVFEPLMIRLS---------------------- 92
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
A D RG G S P +T Y A D+ L+ L A + GHS+GA +
Sbjct: 93 -DRFTTIAVDQRGHGLSDKP--ETGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSV 149
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
AA P+ V S+ ++ T P ++ + L A+ + + Y
Sbjct: 150 TAAAKYPDLVRSVVAIDFT-------PYIETEALD-ALEARVNAGSQLFEDIKAVEAYLA 201
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS--A 260
+ R + +G Q DG + + + +RS
Sbjct: 202 GRYPNIPADAIRI----------RAESGYQ---PVDGGLRPLASSAAMAQTARGLRSDLV 248
Query: 261 GFL------VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
V ++ G + + + P ++ +PG H V+ E +A
Sbjct: 249 PAYRDVTKPVLIVRGESSKLVSAAALAKTSRLR-PDLPVVVVPGADHYVNEVSPEITLKA 307
Query: 314 LIDLIKA 320
+ + I A
Sbjct: 308 ITNFIDA 314
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 8e-36
Identities = 58/306 (18%), Positives = 108/306 (35%), Gaps = 45/306 (14%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I+I+Y +G G V+LI G + +W Q+ L
Sbjct: 13 NQAPIEIYYEDHGTGKP-VVLIHGWPLSGRSWEYQVPALVE------------------- 52
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V +D RG G+SS P Y D+ L++ L + + G SMG
Sbjct: 53 ---AGYRVITYDRRGFGKSSQP--WEGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGE 107
Query: 141 ACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTPEKRAAVDLDT 198
+ + +R+ + L A I F++ R A
Sbjct: 108 VARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLA----- 162
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT--QKDIQT 256
+ E+ + + + R ++ + + + G + T +KD++
Sbjct: 163 -FLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGA--SPKGTLDCITAFSKTDFRKDLEK 219
Query: 257 IRSAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ +IHG D Y+ +L + P +++ + G H ++ +E N+A
Sbjct: 220 FN-----IPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEA 274
Query: 314 LIDLIK 319
L+ +K
Sbjct: 275 LLLFLK 280
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 2e-35
Identities = 70/355 (19%), Positives = 114/355 (32%), Gaps = 63/355 (17%)
Query: 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLA 60
MP+ V N I ++Y +G G V+LI G + +W Q L
Sbjct: 1 MPFITV-----------GQENSTSIDLYYEDHGTGVP-VVLIHGFPLSGHSWERQSAALL 48
Query: 61 GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIAL 120
AG V +D RG G+SS P T Y A D+ +
Sbjct: 49 D----------------------AGYRVITYDRRGFGQSSQP--TTGYDYDTFAADLNTV 84
Query: 121 MDHLGWKQAHVFGHSMGAMIACK-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179
++ L + A + G SMG + +++ R+ ++A L
Sbjct: 85 LETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQE 144
Query: 180 -IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238
A R A Y+ + + Y + +E V+ T +
Sbjct: 145 FFDGIVAAVKADRYAF-----YTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAA 199
Query: 239 GQIHACWMHKMTQKDIQTIRSAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDL 296
W DI I V ++HG D I R+ K P A +++
Sbjct: 200 AAAPTTWYTDFRA-DIPRID-----VPALILHGTGDRTLPIENTARVFHKALPSAEYVEV 253
Query: 297 PG-GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTSSGVLAKGMSFVRT 350
G H + EEVN AL+ + + L +L + ++V +
Sbjct: 254 EGAPHGLLWTHAEEVNTALLAFLAKA-----------LEAQKQKLLTEVETYVLS 297
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-35
Identities = 63/317 (19%), Positives = 100/317 (31%), Gaps = 70/317 (22%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G++IFY+ +G+G V+ I G DAW QLK +
Sbjct: 7 DGVEIFYKDWGQGRP-VVFIHGWPLNGDAWQDQLKAVVD--------------------- 44
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG A D RG G S+ Y A D+ L+ L + + HSMG
Sbjct: 45 -AGYRGIAHDRRGHGHSTPV--WDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELA 101
Query: 143 KLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+ R+ S LL+ A P +
Sbjct: 102 RYVGRHGTGRLRSAVLLS-------------------------AIPPVMIKSDKNPDGVP 136
Query: 202 QEYLEEYV-GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
E + G T R+ +++ +G + N G A W M Q +R
Sbjct: 137 DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCV 196
Query: 261 GFLVS---------------VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHL--V 302
V+HG D + I R + ++ P A + G H +
Sbjct: 197 DAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAM 256
Query: 303 SHERTEEVNQALIDLIK 319
E+ N+ L++ +
Sbjct: 257 VPGDKEKFNRDLLEFLN 273
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-35
Identities = 49/315 (15%), Positives = 91/315 (28%), Gaps = 63/315 (20%)
Query: 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+ + + G G ++ G W
Sbjct: 4 MTSILSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFE------------------- 44
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI--MAKDVIALMDHLGWKQAHVFGHSMG 137
V FD G G S + + A+DV+ + + L K+ GHS+G
Sbjct: 45 ----EDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVG 100
Query: 138 AMIACKLAAMVPERVLSLALLNVTG----------GGFQCCPKLDLQTLSIAIRFFRAKT 187
A+I + PE L ++ + GGF + L L +
Sbjct: 101 ALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGF---EEEQLLGLLEMMEKNYIGW 157
Query: 188 PEKRAAVDLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWM 246
AA L+ E EE ++ +++ K + +
Sbjct: 158 ATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHRE------------- 204
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
D+ + ++ D+IA + + + L P + + + GH
Sbjct: 205 ------DLSKVTVP---SLILQCADDIIAPATVGKYMHQHL-PYSSLKQMEARGHCPHMS 254
Query: 306 RTEEVNQALIDLIKA 320
+E Q + D +KA
Sbjct: 255 HPDETIQLIGDYLKA 269
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-35
Identities = 61/304 (20%), Positives = 105/304 (34%), Gaps = 45/304 (14%)
Query: 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
+G +I+++ +G G V+ G D W Q++ L+
Sbjct: 6 KDGTQIYFKDWGSGKP-VLFSHGWLLDADMWEYQMEYLSS-------------------- 44
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
G AFD RG GRS P T A D+ L++HL K+ + G SMG
Sbjct: 45 --RGYRTIAFDRRGFGRSDQP--WTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDV 100
Query: 142 CK-LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ +A RV L LL F P F+ + + RA +
Sbjct: 101 ARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQ------F 154
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT--QKDIQTIR 258
++ + G + + ++ Q + + + T + D+ I
Sbjct: 155 ISDFNAPFYGIN-KGQVVSQGVQTQTLQIALLA--SLKATVDCVTAFAETDFRPDMAKID 211
Query: 259 SAGFLV--SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
V VIHG D I ++A +L A + H + +++N+ L+
Sbjct: 212 -----VPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL 266
Query: 316 DLIK 319
+K
Sbjct: 267 AFLK 270
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 6e-35
Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 46/302 (15%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
K+ Y R ++L+ G H + ++ L
Sbjct: 12 FDNKLSYIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELD-------------------- 51
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
A V + RG G S V ++ + KD + ++D LG + HS G +
Sbjct: 52 ---ADFRVIVPNWRGHGLSPSEV--PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWV 106
Query: 141 ACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+L PER +++ A K PE+
Sbjct: 107 LVELLEQAGPERAPRGIIMDWLMWA---------PKPDFAKSLTLLKDPERW-------R 150
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
L + + ++ ++ G I + + + +
Sbjct: 151 EGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLT 210
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
+ I + AE+ P L G H + + + + +
Sbjct: 211 KTRPIRHIFSQPTEPEYEKINSDFAEQH-PWFSYAKLGGPTHFPAIDVPDRAAVHIREFA 269
Query: 319 KA 320
A
Sbjct: 270 TA 271
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-34
Identities = 67/306 (21%), Positives = 97/306 (31%), Gaps = 45/306 (14%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G IFY+ +G G V+ G + D W Q+
Sbjct: 7 DGTNIFYKDWGPRDGLP-VVFHHGWPLSADDWDNQMLFFLS------------------- 46
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM-GAM 139
G V A D RG GRS P T + A DV AL + L + A GHS G
Sbjct: 47 ---HGYRVIAHDRRGHGRSDQP--STGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGE 101
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A +A P RV L++ FRA RA +D
Sbjct: 102 VARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVP 161
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC--WMHKMTQKDIQTI 257
Y G + A + Q + GM + + D++ I
Sbjct: 162 SGPFY-----GFNREGATVSQGLIDHWWLQGMMG--AANAHYECIAAFSETDFTDDLKRI 214
Query: 258 RSAGFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314
V V HG D + A + +L A + G H + E +N L
Sbjct: 215 D-----VPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDL 269
Query: 315 IDLIKA 320
+ +K+
Sbjct: 270 LAFVKS 275
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-34
Identities = 63/321 (19%), Positives = 115/321 (35%), Gaps = 56/321 (17%)
Query: 21 NDNGIKIFYR----TYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDS 76
+ + Y G T ++L+ G W + LA
Sbjct: 28 QGQPLSMAYLDVAPKKANGRT-ILLMHGKNFCAGTWERTIDVLAD--------------- 71
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM 136
AG V A D G +SS P +Y+ + +A + AL++ LG +A V GHSM
Sbjct: 72 -------AGYRVIAVDQVGFCKSSKPAH-YQYSFQQLAANTHALLERLGVARASVIGHSM 123
Query: 137 GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
G M+A + A + P +V L L+N G + +++ R + E
Sbjct: 124 GGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQ 183
Query: 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256
T+Y+ E+ E+ +A +Y+ + A Y + ++
Sbjct: 184 ATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTY-------DMIFTQPVVYELDR 236
Query: 257 IRSAGFLVSVIHGRHDVIA----------------QICYARRLAEKLYPVARMIDLPG-G 299
++ L ++ G D A + A ++ P A +++ P G
Sbjct: 237 LQ-MPTL--LLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI-PQATLVEFPDLG 292
Query: 300 HLVSHERTEEVNQALIDLIKA 320
H + E +QAL++ ++
Sbjct: 293 HTPQIQAPERFHQALLEGLQT 313
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 4e-34
Identities = 67/318 (21%), Positives = 99/318 (31%), Gaps = 69/318 (21%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G++IFY+ +G P + G + D W QL
Sbjct: 8 DGVQIFYKDWGPRDAPV-IHFHHGWPLSADDWDAQLLFFLA------------------- 47
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V A D RG GRSS + A DV A++ HLG + A GHS G
Sbjct: 48 ---HGYRVVAHDRRGHGRSSQV--WDGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGE 102
Query: 141 ACKLAAMVPE-RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+ A PE +V L+ P L +QT ++ +A V +
Sbjct: 103 VVRYMARHPEDKVAKAVLIAAV-------PPLMVQTPGNPGGLPKSVFDGFQAQVASN-- 153
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKG-ISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
RA Y++ G +G I W M
Sbjct: 154 ---------------RAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYD 198
Query: 259 SAGFL---------------VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV 302
V V+HG D I + L+ KL P + G H +
Sbjct: 199 GIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGM 258
Query: 303 SHERTEEVNQALIDLIKA 320
+ +N L+ I++
Sbjct: 259 PTTHADVINADLLAFIRS 276
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 5e-34
Identities = 53/310 (17%), Positives = 108/310 (34%), Gaps = 54/310 (17%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G +I ++G P V+ I G+ AW LA
Sbjct: 12 GGNQICLCSWGSPEHPV-VLCIHGILEQGLAWQEVALPLAA------------------- 51
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V A D G GRSS T Y++ + ++ L + + GHSMGAM+
Sbjct: 52 ---QGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAML 108
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD--- 197
A +A++ P+++ L L+ + + + + L+ + + TP+ D+
Sbjct: 109 ATAIASVRPKKIKELILVELPLPAEESKKESAVNQLT-TCLDYLSSTPQHPIFPDVATAA 167
Query: 198 -------THYSQEYLEEYVGSSTRRAI-----LYQEYVKGISATGMQSNYGFDGQIHACW 245
S+E+ T+ + ++ S G+ + G Q
Sbjct: 168 SRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEML 227
Query: 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHE 305
++I+ ++++G + + ++ A+ + L GGH + +
Sbjct: 228 ---------KSIQVP---TTLVYGDSSKLNRPEDLQQQKM-TMTQAKRVFLSGGHNLHID 274
Query: 306 RTEEVNQALI 315
+ ++
Sbjct: 275 AAAALASLIL 284
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 6e-34
Identities = 64/317 (20%), Positives = 106/317 (33%), Gaps = 52/317 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ +IF R G GP ++L+ G TH W LA
Sbjct: 21 SSGRIFARVGGDGPP-LLLLHGFPQTHVMWHRVAPKLA---------------------- 57
Query: 83 GAGIEVCAFDNRGMGRSSVP---VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+V D G G S +P + T YT + MAK +I M+ LG + GH+ GA
Sbjct: 58 -ERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGAR 116
Query: 140 IACKLAAMVPERVLSLALLNV--TGGGFQCC-PKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
++ +LA P R+ LA+L++ T +Q L+ + A PE D
Sbjct: 117 VSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAPLPENLLGGD- 175
Query: 197 DTHYSQEYLEEYVGSSTRRAI---LYQEYVKGISATGMQSNYGFDGQIHA-C----WMHK 248
Y + L + + A + Y + H C
Sbjct: 176 PDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMR---------RHVMCEDYRAGAY 226
Query: 249 MTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH 304
+ + AG + V + G + + K + + GH +
Sbjct: 227 ADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPIESGHFLPE 286
Query: 305 ERTEEVNQALIDLIKAS 321
E ++ +AL+ A+
Sbjct: 287 EAPDQTAEALVRFFSAA 303
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-33
Identities = 53/312 (16%), Positives = 103/312 (33%), Gaps = 63/312 (20%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
G G V+L G + W L L
Sbjct: 19 NNINITGGGEKTVLLAHGFGCDQNMWRFMLPELE-----------------------KQF 55
Query: 87 EVCAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
V FD G G+S + T+ + + AKDV ++ L + GHS+ ++IA
Sbjct: 56 TVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIA 115
Query: 145 AAMVPERVLSLALLNVTG----------GGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194
+ V +R+ + ++ + GGF + DL+ L + A +
Sbjct: 116 STHVGDRISDITMICPSPCFMNFPPDYVGGF---ERDDLEELINLMDKNYIGWANYLAPL 172
Query: 195 DLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
+ +S E + E GS I+ + + K + +S
Sbjct: 173 VMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRS-------------------L 213
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
++ I + + D +A + +AE + P +++ + GH + +
Sbjct: 214 LEDISTP---ALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLHMTDAGLITP 269
Query: 313 ALIDLIKASEKK 324
LI I+ ++ +
Sbjct: 270 LLIHFIQNNQTR 281
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-33
Identities = 46/298 (15%), Positives = 103/298 (34%), Gaps = 36/298 (12%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
++I + G+G V+L+ G W + + +
Sbjct: 21 AGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVE---------------- 64
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V D G G+S V + + + A+ + +++D L + H+ G+SMG
Sbjct: 65 ---AGYRVILLDCPGWGKSDSVVN-SGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHS 120
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ PERV L L+ GG + + + + +R T E + +
Sbjct: 121 SVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVF 180
Query: 201 SQEYL-EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
L + + + +++++ + +++N + ++ +
Sbjct: 181 DTSDLTDALFEARLNNMLSRRDHLENFVKS-LEANPKQFPDFGPR-LAEIKAQ------- 231
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
++ GR+D + RL + + + GH E + NQ +++
Sbjct: 232 ----TLIVWGRNDRFVPMDAGLRLLSGI-AGSELHIFRDCGHWAQWEHADAFNQLVLN 284
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-33
Identities = 65/325 (20%), Positives = 102/325 (31%), Gaps = 55/325 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ I G GP ++L+ G W LA
Sbjct: 13 GDVTINCVVGGSGPA-LLLLHGFPQNLHMWARVAPLLA---------------------- 49
Query: 83 GAGIEVCAFDNRGMGRSSVP---VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V D RG G SS P Y+ + MA D LM LG+++ H+ GH+ G
Sbjct: 50 -NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGR 108
Query: 140 IACKLAAMVPERVLSLALLNV--TGGGFQCCPKLDLQTL-SIAIRFFRAKTPEKRAAVDL 196
++A P+ VLSLA+L++ T F+ + + A PEK D
Sbjct: 109 TGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADP 168
Query: 197 DTHYSQEYLEEYVGSSTRRAI---LYQEYVKGISATGMQSNYGFDGQIHA-C----WMHK 248
DT Y G++ +EY K IH C
Sbjct: 169 DTFYEGCLFGW--GATGADGFDPEQLEEYRKQWRDPAA---------IHGSCCDYRAGGT 217
Query: 249 MTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH 304
+ + G V G ++ + + + R LPGGH
Sbjct: 218 IDFELDH--GDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASLPGGHFFVD 275
Query: 305 ERTEEVNQALIDLIKASEKKISPQD 329
++ + L + + + I +
Sbjct: 276 RFPDDTARILREFLSDARSGIHQTE 300
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 9e-33
Identities = 56/300 (18%), Positives = 103/300 (34%), Gaps = 45/300 (15%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ I Y G G T VI++ G W + +
Sbjct: 21 SDFNIHYNEAGNGET-VIMLHGGGPGAGGWSNYYRNVGPFVD------------------ 61
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V D+ G +S V E + A+ V LMD L +AH+ G++MG A
Sbjct: 62 -AGYRVILKDSPGFNKSDAVVM-DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATAL 119
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK-RAAVDL----D 197
A P+R+ L L+ G G + ++ + + + + + E + + +
Sbjct: 120 NFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQ 179
Query: 198 THYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257
+ ++E L+ + R+ N+ Q +T + I
Sbjct: 180 SLITEELLQGRWEAIQRQP-------------EHLKNFLISAQKAPLSTWDVT-ARLGEI 225
Query: 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
++ + GR D + + +L + AR+ G E +E N+ +ID
Sbjct: 226 KAK---TFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGAWAQWEHADEFNRLVID 281
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-32
Identities = 60/303 (19%), Positives = 105/303 (34%), Gaps = 56/303 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G+ Y G G VILI G + W + L+
Sbjct: 13 AGVLTNYHDVGEGQP-VILIHGSGPGVSAYANWRLTIPALS------------------- 52
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D G G + P Y+ +I +MD L ++AH+ G++ G
Sbjct: 53 ----KFYRVIAPDMVGFGFTDRPEN-YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGG 107
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK-RAAVDL-- 196
+A A ERV + L+ G F L+ + + E R +D+
Sbjct: 108 LAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAV-------WGYTPSIENMRNLLDIFA 160
Query: 197 --DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
+ + E +S + +QE + Q + +DI
Sbjct: 161 YDRSLVTDELARLRYEASIQPG--FQESFSSMFPEPRQRWID---------ALASSDEDI 209
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+T+ + +IHGR D + + + RL E + A++ GH E+T+ N+
Sbjct: 210 KTLPNE---TLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRL 265
Query: 314 LID 316
+++
Sbjct: 266 VVE 268
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-32
Identities = 41/306 (13%), Positives = 97/306 (31%), Gaps = 52/306 (16%)
Query: 24 GIKIFYRTY----GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G Y+ Y ++ + G + ++
Sbjct: 1 GHMTHYKFYEANVETNQV-LVFLHGFLSDSRTYHNHIEKFT------------------- 40
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V D G G + +T + + + ++D K +FG+SMG
Sbjct: 41 ----DNYHVITIDLPGHGEDQSSMDET-WNFDYITTLLDRILDKYKDKSITLFGYSMGGR 95
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A A + +L L + T G + + + R K +
Sbjct: 96 VALYYAINGHIPISNLILES-TSPGIK-------EEANQLERRLVDDARAKVLDIAGIEL 147
Query: 200 YSQEYLEEYVGSSTRR--AILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT--QKDIQ 255
+ ++ + + S + + + + QS + + +M ++
Sbjct: 148 FVNDWEKLPLFQSQLELPVEIQHQIRQQRLS---QSPHKMAKALRDYGTGQMPNLWPRLK 204
Query: 256 TIRSAGFLVSVIHGRHD-VIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
I+ ++ G +D QI A+++A + P ++ + GH + E ++E +
Sbjct: 205 EIKVP---TLILAGEYDEKFVQI--AKKMANLI-PNSKCKLISATGHTIHVEDSDEFDTM 258
Query: 314 LIDLIK 319
++ +K
Sbjct: 259 ILGFLK 264
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-31
Identities = 66/314 (21%), Positives = 105/314 (33%), Gaps = 60/314 (19%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+I G G ++L+ G TH W LA
Sbjct: 13 TEARINLVKAGHGAP-LLLLHGYPQTHVMWHKIAPLLA---------------------- 49
Query: 83 GAGIEVCAFDNRGMGRSSVPV---KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D RG G SS P Y+ ++MA+D + +M LG++Q +V GH GA
Sbjct: 50 -NNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGAR 108
Query: 140 IACKLAAMVPERVLSLALLNV--TGGGFQCCPKLDLQTLSIAIRFF-RAKTPEKRAAVDL 196
+A +LA P RV LALL++ T ++ + PE +
Sbjct: 109 VAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETLIGANP 168
Query: 197 DTHYSQEYLEEYVGSSTRRAIL-----YQEYVKGIS----ATGM----QSNYGFDGQIHA 243
+ YL + + + EY++ S ++ D +
Sbjct: 169 E-----YYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDE 223
Query: 244 CWM-HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLV 302
M K++ V V+ G +I + + LP GH +
Sbjct: 224 LDMKQKISCP-----------VLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLPCGHFL 272
Query: 303 SHERTEEVNQALID 316
E EE QA+ +
Sbjct: 273 PEEAPEETYQAIYN 286
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-31
Identities = 56/315 (17%), Positives = 92/315 (29%), Gaps = 54/315 (17%)
Query: 23 NGIKIFYRTYGRGP-----TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSV 77
+ + + +I++ G G + + LA
Sbjct: 36 GDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADE--------------- 80
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHS 135
G V +D G G S+ +T ++ + A+ LG ++ HV G S
Sbjct: 81 ------TGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQS 134
Query: 136 MGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD 195
G M+ ++A P ++SLA+ N A E RAA+D
Sbjct: 135 WGGMLGAEIAVRQPSGLVSLAICNSPASMR--------LWSEAAGDLRAQLPAETRAALD 186
Query: 196 --------LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247
Y Q E Y R Q++ ++ + +
Sbjct: 187 RHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHV 246
Query: 248 KMTQKDIQTIRSAGFL---VSVIHGRHDVIAQICY--ARRLAEKLYPVARMIDLPG-GHL 301
T D I + V VI G HD + + + P R PG H
Sbjct: 247 VGTLGDWSVIDRLPDVTAPVLVIAGEHDE---ATPKTWQPFVDHI-PDVRSHVFPGTSHC 302
Query: 302 VSHERTEEVNQALID 316
E+ EE +
Sbjct: 303 THLEKPEEFRAVVAQ 317
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 3e-31
Identities = 60/316 (18%), Positives = 105/316 (33%), Gaps = 56/316 (17%)
Query: 20 LNDNGIKIFYRTYGR--GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQ 74
+ G P V+L+ G A W P + LA
Sbjct: 12 FPSGTLASHALVAGDPQSPA-VVLLHGAGPGAHAASNWRPIIPDLA-------------- 56
Query: 75 DSVESGDGGAGIEVCAFDNRGMGRSSVPV---KKTEYTTKIMAKDVIALMDHLGWKQAHV 131
V A D G G+S P + + ++ LM+H G +++H+
Sbjct: 57 ---------ENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHI 107
Query: 132 FGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK- 190
G+SMG + +L PER +AL+ G L+ + F+
Sbjct: 108 VGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN----ARPPELARLLAFYADPRLTPY 163
Query: 191 RAAVDLDTH--YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW--M 246
R + + + +EE V +R + V+ I +S + +
Sbjct: 164 RELIHSFVYDPENFPGMEEIV--KSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATL 221
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
++ V V HGR D I + + L + L A ++ L GH E
Sbjct: 222 GRLPHD-----------VLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLE 269
Query: 306 RTEEVNQALIDLIKAS 321
R + + L++ +A+
Sbjct: 270 RWDAMGPMLMEHFRAA 285
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 4e-31
Identities = 39/307 (12%), Positives = 82/307 (26%), Gaps = 47/307 (15%)
Query: 22 DNGIKIFYRTYGRGPTKVILIT--GLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+ + Y + G + ++ G T D + + L
Sbjct: 27 NTLLGPIYTCHREGNPCFVFLSGAGFFSTADNFANIIDKLP------------------- 67
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
I + D G S V + + ++ + +H ++ + HS+G
Sbjct: 68 ----DSIGILTIDAPNSGYSPVS-NQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGF 122
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
A ++ + L L T +A+R + KT R
Sbjct: 123 AALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRL------- 175
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH---KMTQKDIQT 256
YL++ R+ + K + + + ++D +T
Sbjct: 176 ---NYLKDLS-----RSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKT 227
Query: 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALID 316
S V Y + ++I H + T + + +
Sbjct: 228 GISEKIPSIVFSESFREKE---YLESEYLNKHTQTKLILCGQHHYLHWSETNSILEKVEQ 284
Query: 317 LIKASEK 323
L+ EK
Sbjct: 285 LLSNHEK 291
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 9e-31
Identities = 59/314 (18%), Positives = 99/314 (31%), Gaps = 53/314 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+KI Y G GPT ++L+ G G W + LA
Sbjct: 17 PDVKIHYVREGAGPT-LLLLHGWPGFWWEWSKVIGPLA---------------------- 53
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKT--EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+V D RG G S P +Y+ A D AL+D LG ++A+V GH A++
Sbjct: 54 -EHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIV 112
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA-IRFFRAKTPEKRAAVDLDTH 199
K +RV+ A+ + F +F + + +
Sbjct: 113 LHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSRE-- 170
Query: 200 YSQEYLEEYVGS-STRRAIL----YQEYVKGIS----ATGM----QSNYGFDGQIHACWM 246
++Y + + S R +L + +V G ++N D +
Sbjct: 171 VCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLD 230
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
H M+ + +I G D K Y M + GH + E
Sbjct: 231 HTMSDLPVT----------MIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVE 280
Query: 306 RTEEVNQALIDLIK 319
+ E + +
Sbjct: 281 KPEIAIDRIKTAFR 294
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 3e-30
Identities = 46/307 (14%), Positives = 87/307 (28%), Gaps = 58/307 (18%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
NG + Y G PT + L++G H + LA
Sbjct: 7 NGTLMTYSESGDPHAPT-LFLLSGWCQDHRLFKNLAPLLA-------------------- 45
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V D RG ++ ++ +A+D++A +D G + + S G +
Sbjct: 46 ---RDFHVICPDWRGHDAKQTDS--GDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWV 100
Query: 141 ACKLAAMV-PERVLSLALLNVTGGG-----FQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194
+ + R+ +++ Q + F + E
Sbjct: 101 NIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNA 160
Query: 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
D+ H + + G +RA +++NY G M + QK
Sbjct: 161 DVLNHLR-NEMPWFHGEMWQRACR-----------EIEANYRTWGSPLD-RMDSLPQKPE 207
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ + + +PG H S E V QA
Sbjct: 208 I----------CHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQA 257
Query: 314 LIDLIKA 320
+ + ++A
Sbjct: 258 IREFLQA 264
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 3e-30
Identities = 60/299 (20%), Positives = 93/299 (31%), Gaps = 56/299 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G I + G GP V+L+ G T P + LA
Sbjct: 11 DGTPIAFERSGSGPP-VVLVGGALSTRAGGAPLAERLA---------------------- 47
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
V +D RG G S Y + +D+ A++D G A VFG S GA ++
Sbjct: 48 -PHFTVICYDRRGRGDSGDT---PPYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLS- 101
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
LAA + LA+ P + + + A
Sbjct: 102 LLAAASGLPITRLAVF---------EPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVT 152
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH--KMTQKDIQTIRSA 260
++ E VG + V + M G + H M I T R A
Sbjct: 153 YFMTEGVGVP-------PDLVAQMQQAPMWP--GMEAVAHTLPYDHAVMGDNTIPTARFA 203
Query: 261 GFLVS--VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+ V+ G A+ LA+ + P AR + L H + + L++
Sbjct: 204 SISIPTLVMDGGASPAWIRHTAQELADTI-PNARYVTLENQTHT---VAPDAIAPVLVE 258
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 5e-30
Identities = 48/298 (16%), Positives = 90/298 (30%), Gaps = 41/298 (13%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+++ G GP +L G G L+
Sbjct: 11 GEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYL-------------------- 50
Query: 81 DGGAGIEVCAFDNRGMGRSS-VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
G V FD RG GRS +P +T + +D + L + LG ++ + H GA+
Sbjct: 51 ---EGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAV 107
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A ++ P+ ++ L + + + A L
Sbjct: 108 VALEVLRRFPQAEGAILLAPWVNFP----WLAARLAEAAGLAPLPDPEENLKEA--LKRE 161
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
+ + + + R + Y+ +G G G + W T + R
Sbjct: 162 EPKALFDRLMFPTPRGRMAYEWLAEGAGILGSD-APGLAFLRNGLWRLDYTP-YLTPERR 219
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
+ V+ G D + + A + LP GH + + E +A +
Sbjct: 220 PLY---VLVGERDGTSYPYAEEVASR---LRAPIRVLPEAGHYLWIDAPEAFEEAFKE 271
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 5e-30
Identities = 47/295 (15%), Positives = 97/295 (32%), Gaps = 44/295 (14%)
Query: 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
I+++T G+G ++L+ G + W + L+ +
Sbjct: 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS-----------------------SH 39
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
+ D G GRS + D+ + +A G S+G ++A ++A
Sbjct: 40 FTLHLVDLPGFGRSRGF---GALS----LADMAEAVLQQAPDKAIWLGWSLGGLVASQIA 92
Query: 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL 205
PERV +L + + F + + F + + +++ V+ +
Sbjct: 93 LTHPERVRALVTVA-SSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVE------RFLA 145
Query: 206 EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265
+ +G+ T R + K + A M +G + + Q +Q + FL
Sbjct: 146 LQTMGTETARQ-DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQ-PLQNVS-MPFL-- 200
Query: 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++G D + L + P + H E L+ L +
Sbjct: 201 RLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-29
Identities = 38/303 (12%), Positives = 86/303 (28%), Gaps = 69/303 (22%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+ + Y G + ++ + G +G K L +
Sbjct: 1 SNAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFGELEKYLEDYN----------------- 43
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSM 136
D +G G S T Y +V + + K + G+SM
Sbjct: 44 -------CILLDLKGHGESKGQCPSTVYG---YIDNVANFITNSEVTKHQKNITLIGYSM 93
Query: 137 GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
G I +A V + L+ G F + ++
Sbjct: 94 GGAIVLGVALKKLPNVRKVVSLS-GGARF---------------------DKLDKDFMEK 131
Query: 197 --DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
YL E +G L ++Y + + + AC + + ++
Sbjct: 132 IYHNQLDNNYLLECIGGIDN--PLSEKYFETLEK----DPDIMINDLIACKLIDLV-DNL 184
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ I V I + +++ + Y+ + +++ + + H + + V +
Sbjct: 185 KNIDIP---VKAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETGKHFLLVVNAKGVAEE 240
Query: 314 LID 316
+ +
Sbjct: 241 IKN 243
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-28
Identities = 52/304 (17%), Positives = 104/304 (34%), Gaps = 47/304 (15%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G+++ +R Y ++ V+ + GL + LA
Sbjct: 14 DGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLA-------------------- 53
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
V + RG G S Y +D+ AL+ G ++ G S+G ++
Sbjct: 54 ---GDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLL 110
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
LAA P R+ + L +V P++ + L IR + + +
Sbjct: 111 TMLLAAANPARIAAAVLNDVG-------PEVSPEGLE-RIRGYVGQGRNFETWMHAARAL 162
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATG-------MQSNYGFDGQIHACWMHKMTQKD 253
+ + Y + + Y + + + ++G M+ F+ + A M
Sbjct: 163 QESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWP-L 221
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
+ + L V+ G I A ++A + P ++ LP GH + + E +
Sbjct: 222 FDALATRPLL--VLRGETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESIA- 276
Query: 313 ALID 316
A+
Sbjct: 277 AIGR 280
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 5e-27
Identities = 52/304 (17%), Positives = 93/304 (30%), Gaps = 60/304 (19%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G++ Y G+G VILI G + W + LA
Sbjct: 24 GGVETRYLEAGKGQP-VILIHGGGAGAESEGNWRNVIPILA------------------- 63
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGA 138
V A D G G+++ P EYT + + + + + + G+SMG
Sbjct: 64 ----RHYRVIAMDMLGFGKTAKPD--IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGG 117
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK-----RAA 193
++ + E V +L L+ G + L T E +A
Sbjct: 118 ATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRP-------IINYDFTREGMVHLVKAL 170
Query: 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
+ + +T A + YV + Q +D ++ K+
Sbjct: 171 TNDGFKIDDAMINSRYTYATDEATR-KAYVATMQWIREQGGLFYD----PEFIRKVQVP- 224
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
V+ G+ D + + A + + L + +P GH E E+
Sbjct: 225 ----------TLVVQGKDDKVVPVETAYKFLD-LIDDSWGYIIPHCGHWAMIEHPEDFAN 273
Query: 313 ALID 316
A +
Sbjct: 274 ATLS 277
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-26
Identities = 53/316 (16%), Positives = 97/316 (30%), Gaps = 60/316 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G+K+ Y G+GP V+L+ G T W + LA
Sbjct: 18 DGVKLHYVKGGQGPL-VMLVHGFGQTWYEWHQLMPELA---------------------- 54
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIA 141
V A D G+G+S P KT Y+ + +A + L + + H +G
Sbjct: 55 -KRFTVIAPDLPGLGQSEPP--KTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNT 111
Query: 142 CKLAAMVPERVLSLALLNVT--GGGFQCCPKLDLQTLSIA--IRFF--RAKTPEKRAAVD 195
+ + L + P Q S+ FF + E A
Sbjct: 112 YPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGK 171
Query: 196 LDTHYSQEYLEEYVGS-STRRAIL----YQEYVKGISATGMQSNYGFDGQIHA-C-WMHK 248
+LE ++ S ++ + Y + + ++A +
Sbjct: 172 ER-----FFLEHFIKSHASNTEVFSERLLDLYARSYAKPHS---------LNASFEYYRA 217
Query: 249 MTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVS 303
+ + Q A + + + G ++ V LPG GH +
Sbjct: 218 LNESVRQNAELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAEDV-EGHVLPGCGHWLP 276
Query: 304 HERTEEVNQALIDLIK 319
E +N+ +ID +
Sbjct: 277 EECAAPMNRLVIDFLS 292
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 5e-26
Identities = 50/298 (16%), Positives = 92/298 (30%), Gaps = 49/298 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
N + ++L+ GL G+ D G + L
Sbjct: 4 NIRAQTAQNQHNNSP-IVLVHGLFGSLDNLGVLARDLV---------------------- 40
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
+ D R G S ++ MA+D++ +D L +A GHSMG
Sbjct: 41 -NDHNIIQVDVRNHGLSP---REPVMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVM 96
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
L A+ P+R+ L +++ + + AI + R
Sbjct: 97 ALTALAPDRIDKLVAIDIAPVDY---HVRRHDEIFAAINAVSESDAQTRQQAA------- 146
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ +++ L + +V G + + + H + + I
Sbjct: 147 AIMRQHLNEEGVIQFLLKSFVDGEWRFNVPV-------LWDQYPHIVGWEKIPAWDHP-- 197
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
I G + Y L +P AR + G GH V E+ + V +A+ +
Sbjct: 198 -ALFIPGGNSPYVSEQYRDDLL-AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 9e-26
Identities = 60/303 (19%), Positives = 102/303 (33%), Gaps = 46/303 (15%)
Query: 22 DNGIKIFYRTYGRGPTK-VILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSV 77
D +K+ Y G G + V+L+ G + + + LA
Sbjct: 21 DGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLA----------------- 63
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMG 137
V A D G G S + + A + L D LG + + G+++G
Sbjct: 64 ------RHFHVLAVDQPGYGHSDKRAE-HGQFNRYAAMALKGLFDQLGLGRVPLVGNALG 116
Query: 138 AMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD 197
A + A P R L L+ G + + +F A T E A
Sbjct: 117 GGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRV 176
Query: 198 THYSQEYL-EEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW--MHKMTQKDI 254
Y + + E V R A+ + +S G D + W ++++ Q
Sbjct: 177 MVYDKNLITPELVD--QRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQP-- 232
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
V +I GR D + + A + + P A++ GH V E+ +E N+
Sbjct: 233 ---------VLLIWGREDRVNPLDGALVALKTI-PRAQLHVFGQCGHWVQVEKFDEFNKL 282
Query: 314 LID 316
I+
Sbjct: 283 TIE 285
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-25
Identities = 49/317 (15%), Positives = 96/317 (30%), Gaps = 59/317 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G I Y G G V+ + G + W + +
Sbjct: 17 EGATIAYVDEGSGQP-VLFLHGNPTSSYLWRNIIPYVVA--------------------- 54
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG A D GMG S+ P EY + + +D LG + H G++I
Sbjct: 55 -AGYRAVAPDLIGMGDSAKP--DIEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGM 111
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY-- 200
+ A + P+RV ++A + P + + F +T + + LD ++
Sbjct: 112 RHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFV 171
Query: 201 -------------SQEYLEEYV----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243
S+ + Y +R L ++ + + G + + +
Sbjct: 172 ETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTL--QWPREVPIGGEPAFAEAEVLKNG 229
Query: 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV 302
W+ L + H +A L + P + + H +
Sbjct: 230 EWLMASPIP---------KL--LFHAEPGALAPKPVVDYL-SENVPNLEVRFVGAGTHFL 277
Query: 303 SHERTEEVNQALIDLIK 319
+ + Q + D ++
Sbjct: 278 QEDHPHLIGQGIADWLR 294
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 65/324 (20%), Positives = 114/324 (35%), Gaps = 53/324 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+++ + G GP V L G + +W Q+ LA
Sbjct: 246 PRVRLHFVELGSGPA-VCLCHGFPESWYSWRYQIPALAQ--------------------- 283
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V A D +G G SS P + EY +++ K+++ +D LG QA GH G M+
Sbjct: 284 -AGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVW 342
Query: 143 KLAAMVPERVLSLALLNV--TGGGFQCCPKLDLQTLSIA--IRFFRA-KTPEKRAAVDLD 197
+A PERV ++A LN P ++ + +F+ E +L
Sbjct: 343 YMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLS 402
Query: 198 TH-----YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY------------GFDGQ 240
+ + + L+ + S + M + GF G
Sbjct: 403 RTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGP 462
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDL 296
++ W M + +S G + + + D + ++ + E P + +
Sbjct: 463 LN--WYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHM-EDWIPHLKRGHI 519
Query: 297 PG-GHLVSHERTEEVNQALIDLIK 319
GH ++ EVNQ LI +
Sbjct: 520 EDCGHWTQMDKPTEVNQILIKWLD 543
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 97.5 bits (242), Expect = 3e-23
Identities = 41/307 (13%), Positives = 79/307 (25%), Gaps = 56/307 (18%)
Query: 26 KIFYRTYGRGPTK---VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ + YG K + + + + L + +
Sbjct: 22 SVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFV------------ 69
Query: 83 GAGIEVCAFDNRGMGR--SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
D GM P+ + +A + ++ +L + G GA I
Sbjct: 70 -----RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYI 124
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD--LDT 198
+ A P+ V L L+N+ T + D L
Sbjct: 125 LSRYALNHPDTVEGLVLINIDPNAK-----------GWMDWAAHKLTGLTSSIPDMILGH 173
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
+SQE L + L Q+Y I N W ++D+ R
Sbjct: 174 LFSQEELS-------GNSELIQKYRGIIQHAPNLENI------ELYWNSYNNRRDLNFER 220
Query: 259 SAGFLVS----VIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQ 312
+ ++ G KL P + + G + ++ +
Sbjct: 221 GGETTLKCPVMLVVGDQAPHEDA--VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 278
Query: 313 ALIDLIK 319
A ++
Sbjct: 279 AFKYFLQ 285
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 8e-23
Identities = 42/307 (13%), Positives = 83/307 (27%), Gaps = 50/307 (16%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G+++ Y G + + + G + L
Sbjct: 31 EGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTA------------------- 71
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V A D G GRS P YT + ++A +D L ++ + G ++
Sbjct: 72 ---AGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGIL 128
Query: 141 ACKLAAMVPERVLSLALLNVT-------GGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193
L P+ V L ++N G GF+ + + + +
Sbjct: 129 GLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITD 188
Query: 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253
++ Y + G + + + + T Q + W + +
Sbjct: 189 AEVA-----AYDAPFPGPEFKAGVR--RFPAIVPITPDMEGAEIGRQAMSFWSTQWSGP- 240
Query: 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQ 312
+ G D + L + + + + GH V
Sbjct: 241 --------TF--MAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARA 290
Query: 313 ALIDLIK 319
AL +
Sbjct: 291 ALAAFGQ 297
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 1e-22
Identities = 55/311 (17%), Positives = 96/311 (30%), Gaps = 53/311 (17%)
Query: 23 NGIKIFYRTYG--RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
NGI I+Y+ K++ + G G + L+ +
Sbjct: 13 NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK------------------- 53
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAM 139
GI V +D G GRS P + +++T ++ AL L G ++ + G S G
Sbjct: 54 ---EGITVLFYDQFGCGRSEEPDQ-SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGA 109
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV----- 194
+A A + + L + T+ R + R A+
Sbjct: 110 LALAYAVKYQDHLKGLIVSGGLSSVP--------LTVKEMNRLIDELPAKYRDAIKKYGS 161
Query: 195 ---DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251
+ Y + Y R E +K + ++ Y + T
Sbjct: 162 SGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRI-MNGPNEFTITGTI 220
Query: 252 KDIQTIRSAGFL---VSVIHGRHDVIAQIC--YARRLAEKLYPVARMIDLPG-GHLVSHE 305
KD + + G +D + AR + EK+ + + HL E
Sbjct: 221 KDWDITDKISAIKIPTLITVGEYDE---VTPNVARVIHEKI-AGSELHVFRDCSHLTMWE 276
Query: 306 RTEEVNQALID 316
E N+ L D
Sbjct: 277 DREGYNKLLSD 287
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 96.1 bits (239), Expect = 2e-22
Identities = 52/306 (16%), Positives = 97/306 (31%), Gaps = 60/306 (19%)
Query: 29 YRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88
Y++ GP ++L+ G + +W + +
Sbjct: 32 YKSGSEGPV-LLLLHGGGHSALSWAVFTAAIISR---------------------VQCRI 69
Query: 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLA 145
A D R G + V + + + MAKDV +++ + + GHSMG IA A
Sbjct: 70 VALDLRSHGETKVK-NPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTA 128
Query: 146 AM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
+ + +L L +++V + L+ F R P+ +++
Sbjct: 129 SSNLVPSLLGLCMIDVV-------EGTAMDALNSMQNFLRG-RPKTFKSLE-------NA 173
Query: 205 LEEYVGSSTRRAIL-----YQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR- 258
+E V S R + VK D T+K
Sbjct: 174 IEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFR 233
Query: 259 --SAGFL-----VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEV 310
S FL ++ D + + ++ +M LP GH V + ++V
Sbjct: 234 GLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQ----GKFQMQVLPQCGHAVHEDAPDKV 289
Query: 311 NQALID 316
+A+
Sbjct: 290 AEAVAT 295
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 3e-22
Identities = 61/349 (17%), Positives = 105/349 (30%), Gaps = 93/349 (26%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
NG+ + G GPT ++ I G +W Q+ LA
Sbjct: 19 NGLNMHLAELGEGPT-ILFIHGFPELWYSWRHQMVYLAE--------------------- 56
Query: 83 GAGIEVCAFDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGA 138
G A D RG G ++ ++++ + DV+AL++ + ++ V H GA
Sbjct: 57 -RGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGA 115
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
+IA L P++V +L L + +A E
Sbjct: 116 LIAWHLCLFRPDKVKALVNL--------SVHFSKRNPKMNVVEGLKAIYGEDHYISRFQV 167
Query: 199 HYSQEY-LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA-----CWMHKMTQK 252
E S + IL + + G + A W+ +++
Sbjct: 168 PGEIEAEFAPIGAKSVLKKILT---YRDPAPFYFPKGKGLEAIPDAPVALSSWL---SEE 221
Query: 253 DIQTIRSA----GF-----------------------LVSV----IHGRHDVIAQICYAR 281
++ + GF V V I G D+ Y
Sbjct: 222 ELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDL----VYHI 277
Query: 282 RLAEKLYPVARMID----------LPG-GHLVSHERTEEVNQALIDLIK 319
A++ L G H VS ER E+++ + D I+
Sbjct: 278 PGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFIQ 326
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 93.3 bits (231), Expect = 4e-21
Identities = 54/359 (15%), Positives = 95/359 (26%), Gaps = 54/359 (15%)
Query: 14 AAPDAALNDNGIKIFYRTY-----------GRGPTKVILITGLAGTHDAWGPQLKGLAGT 62
A + +++ Y Y ++ + G + W L L
Sbjct: 20 APQSTLCATDRLELTYDVYTSAERQRRSRTATRLN-LVFLHGSGMSKVVWEYYLPRLVAA 78
Query: 63 DKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYTTKIMAKDVIA 119
D A +V D G S+V + T + A+DV+
Sbjct: 79 DAE---------------GNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLK 123
Query: 120 LMDHLGWKQ------AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173
+ V GHSMG A + P L L+ +
Sbjct: 124 IATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRP 183
Query: 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYS-QEYLEEYVGSSTRRAI---LYQEYVKG--IS 227
+ + D + EY++ S + Q +
Sbjct: 184 GLPPDSPQIPENLY-NSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTK 242
Query: 228 ATGMQSNYG-----FDGQIHACW---MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY 279
A+G + G + + M I ++ I G
Sbjct: 243 ASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQN 302
Query: 280 ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKISPQDWTNLPQTS 337
L K + +PG HLV+ E + V + + I SP +++PQ +
Sbjct: 303 QLFLQ-KTLQNYHLDVIPGGSHLVNVEAPDLVIERINHHIH-EFVLTSPLQSSHIPQLT 359
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 4e-21
Identities = 46/307 (14%), Positives = 91/307 (29%), Gaps = 58/307 (18%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
I +G +VI + G W + GL
Sbjct: 68 QAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGLGEP-------------------- 107
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
A D G G S+ + Y+ ++ ++ + ++ L V G S+G + A
Sbjct: 108 -----ALAVDLPGHGHSA-WREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAI 161
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK----RAAVDLDT 198
+LAAM P+ V L L++VT + T + +A +DL
Sbjct: 162 RLAAMAPDLVGELVLVDVTPSAL---QRHAELTAEQRGTVALMHGEREFPSFQAMLDLTI 218
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
+ + + RR + + +G + T D +
Sbjct: 219 AAAPHRDVKSL----RRGVFHNSRRLD------------NGNWVWRYDAIRTFGDFAGLW 262
Query: 259 SAGFLVS----VIHG-RHDVIAQICYARRLAEKLYPVARMID-LPG-GHLVSHERTEEVN 311
+S ++ G + A R + + GH V ++ +
Sbjct: 263 DDVDALSAPITLVRGGSSGFVTDQDTAELHR--RATHFRGVHIVEKSGHSVQSDQPRALI 320
Query: 312 QALIDLI 318
+ + ++
Sbjct: 321 EIVRGVL 327
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 1e-20
Identities = 25/137 (18%), Positives = 40/137 (29%), Gaps = 30/137 (21%)
Query: 23 NGIKIFYRTY---GRGPTKVILITGLAGTHDAWGPQ--LKGLAGTDKPNDDDETILQDSV 77
NG ++F R + + L G + T W +
Sbjct: 12 NGTRVFQRKMVTDSNRRS-IALFHGYSFTSMDWDKADLFNNYSK---------------- 54
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVP--VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHS 135
G V A D G GRS+ K A+ + + G ++ + G S
Sbjct: 55 ------IGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGAS 108
Query: 136 MGAMIACKLAAMVPERV 152
MG + P+ V
Sbjct: 109 MGGGMVIMTTLQYPDIV 125
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 1e-20
Identities = 44/301 (14%), Positives = 86/301 (28%), Gaps = 53/301 (17%)
Query: 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
++ + V+L+ GL G+ W P L LA T
Sbjct: 6 QLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCA-------------------- 45
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACK 143
D G G + + + + + G+S+G +
Sbjct: 46 --ALTLDLPGHGTNPER---HCDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMH 100
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQE 203
A L+L + GG L + R + ++ A +SQ+
Sbjct: 101 GLAQGAFSRLNLRGAIIEGGH----FGLQ----ENEEKAARWQHDQQWAQ-----RFSQQ 147
Query: 204 YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263
+E + ++A ++ T + G A + + + A
Sbjct: 148 PIEHVLSDWYQQA-VFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQA 206
Query: 264 VS----VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
+ + G D ++LAE + GH V HE+ + + + +I
Sbjct: 207 LKLPIHYVCGEQDS-----KFQQLAES--SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMI 259
Query: 319 K 319
Sbjct: 260 H 260
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 91.2 bits (226), Expect = 2e-20
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 23 NGIKIFYRTYG----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVE 78
G +I +GP V+L+ G + +W Q+ LAG
Sbjct: 11 RGTRIHAVADSPPDQQGPL-VVLLHGFPESWYSWRHQIPALAG----------------- 52
Query: 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
AG V A D RG GRSS + Y K + DV+ ++D G +QA V GH GA
Sbjct: 53 -----AGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGA 107
Query: 139 MIACKLAAMVPERVLSLALLNV 160
+A A + P+R + ++V
Sbjct: 108 PVAWTFAWLHPDRCAGVVGISV 129
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 3e-20
Identities = 24/146 (16%), Positives = 41/146 (28%), Gaps = 28/146 (19%)
Query: 23 NGIKIFYRTYGRGPTK----VILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDS 76
G +F+R G + V+L+ G+ + + W L LA
Sbjct: 15 QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQ--------------- 59
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM 136
AG A D G+G S + A++D L V S+
Sbjct: 60 -------AGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSL 112
Query: 137 GAMIACKLAAMVPERVLSLALLNVTG 162
M + ++ +
Sbjct: 113 SGMYSLPFLTAPGSQLPGFVPVAPIC 138
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 2e-19
Identities = 46/250 (18%), Positives = 88/250 (35%), Gaps = 28/250 (11%)
Query: 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149
A D G G+S P Y + + A ++ G A++ G +A LAA P
Sbjct: 60 APDLIGFGQSGKP--DIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRP 117
Query: 150 ERVLSLALLNV-----TGGGFQCCPKLDLQTLSIAIR--FFRAKTPEKRAAVDLDTHYSQ 202
+ V LA + T F + Q + A R F + +TP + A+ L+ +
Sbjct: 118 DFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANA-- 175
Query: 203 EYLEEYVGSSTRRAI------LYQE-YVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255
++E + R + Y+ + S + + ++ + +Q
Sbjct: 176 -FVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFP---RELPIAGEPADVYEALQ 231
Query: 256 TIRSAGFLVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEV 310
+ +A S G + +A R A L +I L G H + + + +
Sbjct: 232 SAHAALAASSYPKLLFTGEPGALVSPEFAERFAASL-TRCALIRLGAGLHYLQEDHADAI 290
Query: 311 NQALIDLIKA 320
+++ I
Sbjct: 291 GRSVAGWIAG 300
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 8e-19
Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 25/243 (10%)
Query: 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149
A D GMG+S P +Y + + A ++ LG ++ + H G+ + A P
Sbjct: 63 APDLIGMGKSDKP--DLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNP 120
Query: 150 ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYV 209
ERV +A + P R +L + ++E +
Sbjct: 121 ERVKGIACME---FIR---PFPTWDEWPEFARETFQAFRTADVGRELIIDQNA-FIEGAL 173
Query: 210 GSSTRRAI------LYQE-YVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
R + Y+E ++K + + F ++ ++ +
Sbjct: 174 PKCVVRPLTEVEMDHYREPFLKPVDREPLWR---FPNELPIAGEPANIVALVEAYMNWLH 230
Query: 263 LVSV----IHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDL 317
V G V+ A RLAE L P + +D+ G H + + + + +
Sbjct: 231 QSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARW 289
Query: 318 IKA 320
+ A
Sbjct: 290 LPA 292
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 1e-18
Identities = 45/312 (14%), Positives = 88/312 (28%), Gaps = 46/312 (14%)
Query: 20 LNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSV 77
+N I Y + VI + G A + W + +
Sbjct: 26 MNVLDSFINYYDSEKHAENA-VIFLHGNATSSYLWRHVVPHIE----------------- 67
Query: 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSM 136
D GMG+S Y K + A + L K+ GH
Sbjct: 68 ------PVARCIIPDLIGMGKSGKS-GNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDW 120
Query: 137 GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
GA +A A +R+ ++ + + + I +++ EK +
Sbjct: 121 GAALAFHYAYEHQDRIKAIVHME--SVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENN 178
Query: 197 DTHYSQEYLEEYVGSSTRRAI---LYQEYVKGISATGMQSNYG--FDGQIHACWMHKMTQ 251
+E + S R + + Y++ G + +I K
Sbjct: 179 FF------VETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDV 232
Query: 252 KDIQTIRSAGFLVS----VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT 307
I +A S + D A K +P + + G H + +
Sbjct: 233 VQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGA-KKFPNTEFVKVKGLHFLQEDAP 291
Query: 308 EEVNQALIDLIK 319
+E+ + + ++
Sbjct: 292 DEMGKYIKSFVE 303
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 5e-18
Identities = 48/318 (15%), Positives = 83/318 (26%), Gaps = 64/318 (20%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G ++ Y G+G ++ G + W + L
Sbjct: 16 AGKRMAYIDEGKGDA-IVFQHGNPTSSYLWRNIMPHLE--------------------GL 54
Query: 83 GAGIEVCAFDNRGMGRSS--VPVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAM 139
G + A D GMG S P Y+ + AL D L + H G+
Sbjct: 55 GRLV---ACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSA 111
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL-QTLSIAIRFFRAKTPEKRAAVDLDT 198
+ A +RV +A + D + + FR+ E A
Sbjct: 112 LGFDWANQHRDRVQGIAFMEA---IVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIF 168
Query: 199 HYSQ---------------EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243
Y +V R + +
Sbjct: 169 VERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRS 228
Query: 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAE--KLYPVARMIDLPGGHL 301
W+ + L I+ I R+ + + +P I +PG H
Sbjct: 229 -WLEETDMP---------KL--FINAEPGAII----TGRIRDYVRSWPNQTEITVPGVHF 272
Query: 302 VSHERTEEVNQALIDLIK 319
V + EE+ A+ ++
Sbjct: 273 VQEDSPEEIGAAIAQFVR 290
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 6e-18
Identities = 39/250 (15%), Positives = 76/250 (30%), Gaps = 28/250 (11%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
+G V A D G G+S PV + +YT + ++AL++ L + + G +
Sbjct: 73 SGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLT 132
Query: 144 LAAMVPERVLSLALLNV---TGGGFQCCPKLDLQTLSIAIRFFRAKTPE----------K 190
L P R L ++N T Q + + ++ K
Sbjct: 133 LPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMK 192
Query: 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250
R A L + Y + +S + + + K ++ I
Sbjct: 193 RWAPTLTEAEASAYAAPFPDTSYQAGVRK--FPKMVAQRDQAXIDISTEAISF----WQN 246
Query: 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE 309
+ QT + G D + + + +++ GH V +
Sbjct: 247 DWNGQTF--------MAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQV 298
Query: 310 VNQALIDLIK 319
+AL +
Sbjct: 299 AREALKHFAE 308
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 1e-17
Identities = 44/313 (14%), Positives = 79/313 (25%), Gaps = 54/313 (17%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G ++ Y G G ++ G + W + AG +
Sbjct: 17 KGRRMAYIDEGTGDP-ILFQHGNPTSSYLWRNIMPHCAGLGR------------------ 57
Query: 83 GAGIEVCAFDNRGMGRSSVP--VKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAM 139
+ A D GMG S Y + AL + L + + H G+
Sbjct: 58 -----LIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSA 112
Query: 140 IACKLAAMVPERVLSLALLNVTG-------------GGFQCCPKLDLQTLSIAIRFFRAK 186
+ A ERV +A + FQ + L + F +
Sbjct: 113 LGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQ 172
Query: 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246
L Y E ++ + R + A W+
Sbjct: 173 VLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAG-WL 231
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHER 306
+ L I+ + R P I + G H + +
Sbjct: 232 SESPIP---------KL--FINAEPGALTTG-RMRDFCRTW-PNQTEITVAGAHFIQEDS 278
Query: 307 TEEVNQALIDLIK 319
+E+ A+ ++
Sbjct: 279 PDEIGAAIAAFVR 291
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 2e-12
Identities = 34/290 (11%), Positives = 90/290 (31%), Gaps = 64/290 (22%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G V+L+ G G + L G A +
Sbjct: 15 GERAVLLLHGFTGNSADVRMLGRFLES----------------------KGYTCHAPIYK 52
Query: 95 GMGRSSVPVKKTEYTTKI-MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVL 153
G G + T + + + G+++ V G S+G + + KL VP +
Sbjct: 53 GHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IE 110
Query: 154 SLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST 213
+ + C + +++ E + ++ +E++ +
Sbjct: 111 GIVTM---------CAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPM 161
Query: 214 RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273
+ + +Q + + + I + V+ RHD
Sbjct: 162 K------------TLKALQE------------LIADVRDHLDLIYAP-TF--VVQARHDE 194
Query: 274 IAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERT-EEVNQALIDLIKA 320
+ A + ++ PV ++ GH+++ ++ +++++ + +++
Sbjct: 195 MINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 244
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 60.5 bits (146), Expect = 2e-11
Identities = 20/128 (15%), Positives = 35/128 (27%), Gaps = 34/128 (26%)
Query: 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
L+ G+ + + G+GP +++ A W L
Sbjct: 7 LHLYGLNLVFDRVGKGPPVLLV----AEEASRWPEALP---------------------- 40
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
G D G GR+ P + +A V + V +G
Sbjct: 41 ----EGYAFYLLDLPGYGRTEGP----RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLA 92
Query: 140 IACKLAAM 147
+ L A+
Sbjct: 93 LGPHLEAL 100
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 62.1 bits (150), Expect = 5e-11
Identities = 53/252 (21%), Positives = 86/252 (34%), Gaps = 31/252 (12%)
Query: 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147
V FD RG GRS TT + D+ L + G +Q VFG S G+ +A A
Sbjct: 66 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 125
Query: 148 VPERVLSLALLNVT------------GGGFQCCPKLDLQTLSIAIRFFRAKTPEK--RAA 193
PERV + L + G + P+ + LSI R +
Sbjct: 126 HPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRL 185
Query: 194 VDLDTHYSQEYLEEYVGSSTRRAIL--------YQEYVKGISATGMQSNYGFDGQIHACW 245
D E + + L + E ++ ++++Y H +
Sbjct: 186 TSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHY----FTHLGF 241
Query: 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH 304
+ Q ++HGR+D+ Q+ A LA+ P A + + G GH
Sbjct: 242 LESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSYDE 300
Query: 305 ERTEEVNQALID 316
+ L+
Sbjct: 301 ---PGILHQLMI 309
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 7e-11
Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 31/258 (12%)
Query: 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147
+ FD RG GRS+ + TT + D+ L HLG + VFG S G+ +A A
Sbjct: 63 IVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQT 122
Query: 148 VPERVLSLALLNVTGGGFQ-----CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
P++V L L + + A P +RA DL + + +
Sbjct: 123 HPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERA--DLMSAFHR 180
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ----------------IHACWM 246
+ + A + + S + ++ + ++ +
Sbjct: 181 RLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFF 240
Query: 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305
Q R A ++HGR+DV+ + A L + P A++ P GH
Sbjct: 241 EVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAFEP 299
Query: 306 RTEEVNQALIDLIKASEK 323
+ L++A++
Sbjct: 300 ENVDA------LVRATDG 311
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 4e-10
Identities = 43/309 (13%), Positives = 87/309 (28%), Gaps = 79/309 (25%)
Query: 20 LNDNGIKIFYR-TYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDS 76
L +G+++ G I+ G + L+ +A + L+D
Sbjct: 27 LERDGLQLVGTREEPFGEIYDMAIIFHGFTANRN--TSLLREIANS----------LRD- 73
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVF 132
I FD G G S K T +D A+++++ + ++
Sbjct: 74 -------ENIASVRFDFNGHGDSDG--KFENMTVLNEIEDANAILNYVKTDPHVRNIYLV 124
Query: 133 GHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192
GH+ G ++A LA + P+ + + LL P L+ ++
Sbjct: 125 GHAQGGVVASMLAGLYPDLIKKVVLL---------APAATLKGDALEGNTQGVTYNPDHI 175
Query: 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252
L D + ++ Q
Sbjct: 176 PDRLP--------------------------------------FKDLTLGGFYLRIAQQL 197
Query: 253 DI-QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGG-HLVSHERTEEV 310
I + V +IHG D + +++ + + + G H S +
Sbjct: 198 PIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNS-TLHLIEGADHCFSDSYQKNA 256
Query: 311 NQALIDLIK 319
D ++
Sbjct: 257 VNLTTDFLQ 265
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 6e-10
Identities = 33/317 (10%), Positives = 82/317 (25%), Gaps = 85/317 (26%)
Query: 21 NDNGIKI-FYRTYGRGPTK-----VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQ 74
+NG ++ + T + +++ +G A D + + L+
Sbjct: 14 VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST------------- 60
Query: 75 DSVESGDGGAGIEVCAFDNRG-MGRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAH 130
G V +D+ +G SS + E+T + + L G +
Sbjct: 61 ---------NGFHVFRYDSLHHVGLSSGSI--DEFTMTTGKNSLCTVYHWLQTKGTQNIG 109
Query: 131 VFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190
+ S+ A +A ++ + + L A+
Sbjct: 110 LIAASLSARVAYEVISDLELSFLITAV--------------------------------- 136
Query: 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250
V+L + +Y + + + ++ +
Sbjct: 137 -GVVNLRDTLEKALGFDY----------LSLPIDELPNDLDFEGHKLGSEVFVRDCFEHH 185
Query: 251 QKDIQTIRSAGFLVS----VIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSH 304
+ + S +D + + + ++ L G H +
Sbjct: 186 WDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG- 244
Query: 305 ERTEEVNQALIDLIKAS 321
E + + KA+
Sbjct: 245 ENLVVLRNFYQSVTKAA 261
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 2e-09
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
G V + G P + + V ++ G + ++ GHS G + +
Sbjct: 40 RGATVYVANLSGFQSDDGP----NGRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRY 95
Query: 144 LAAMVPERVLSLALLNVTGGG 164
+AA+ P+ V S+ + G
Sbjct: 96 VAAVAPDLVASVTTIGTPHRG 116
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 9e-09
Identities = 37/288 (12%), Positives = 73/288 (25%), Gaps = 71/288 (24%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
T V+L+ G+ + + L +G V
Sbjct: 21 TDTGVVLLHAYTGSPNDMNFMARALQR----------------------SGYGVYVPLFS 58
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERV 152
G G T+ I + A + H+ + + VFG S+G + A K +P
Sbjct: 59 GHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGIT 118
Query: 153 LSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS 212
+ P L + + A+ + A ++ YL +
Sbjct: 119 AGGVFSS---------PILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQL--- 166
Query: 213 TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272
AI D+ ++ + D
Sbjct: 167 --AAID--------------------------QFATTVAADLNLVKQP---TFIGQAGQD 195
Query: 273 VIAQICYARRLAEKLYPVA--RMIDLPG-GHLVSHER-TEEVNQALID 316
+ A +L + L A H+++ + + +I
Sbjct: 196 ELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIA 243
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 64/246 (26%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTT-KIMAKDVIALMDHL----GWKQAHVFGHSMGA 138
G+ D G G+S K E T +++A++D+ ++ GHS G
Sbjct: 55 IGVATLRADMYGHGKSD---GKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGG 111
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
+ AAM + + +L L P + ++ K + +LD
Sbjct: 112 LSVMLAAAMERDIIKALIPL---------SPAAMIPEIARTGELLGLKFDPENIPDELDA 162
Query: 199 H----YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
Y+ + I +++V +
Sbjct: 163 WDGRKLKGNYVRV------AQTIRVEDFVDKYTKP------------------------- 191
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGG-HLVSHERTEEVNQA 313
V ++HG D + +++ Y +++ +PG H H E V +A
Sbjct: 192 ---------VLIVHGDQDEAVPYEASVAFSKQ-YKNCKLVTIPGDTHCYDHHL-ELVTEA 240
Query: 314 LIDLIK 319
+ + +
Sbjct: 241 VKEFML 246
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 8e-08
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKI--MAKDVIALMDHLGWKQAH------VFGHS 135
+ V A D+ G G+S + + +DV+ +D + ++ + + GHS
Sbjct: 68 LDLLVFAHDHVGHGQSE---GERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHS 122
Query: 136 MGAMIACKLAAMVPERV 152
MG IA AA P
Sbjct: 123 MGGAIAILTAAERPGHF 139
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKI--MAKDVIALMDHLGWKQAH------VFGHS 135
+ V A D+ G G+S + + +DV+ +D + ++ + + GHS
Sbjct: 86 LDLLVFAHDHVGHGQSE---GERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHS 140
Query: 136 MGAMIACKLAAMVPERV 152
MG IA AA P
Sbjct: 141 MGGAIAILTAAERPGHF 157
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 4e-07
Identities = 36/238 (15%), Positives = 78/238 (32%), Gaps = 39/238 (16%)
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
G+ FD G G S + + + ++ +A++DH ++A + G SMG IA +L
Sbjct: 66 GVGAIRFDYSGHGASGGAFRDGTISRWL--EEALAVLDHFKPEKAILVGSSMGGWIALRL 123
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
+ R + ++ + RA+ E ++ + +
Sbjct: 124 IQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPN 183
Query: 205 LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264
+ DG+ + + + + G V
Sbjct: 184 IFTR-------------------------ALMEDGRAN---------RVMAGMIDTGCPV 209
Query: 265 SVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPGG-HLVS-HERTEEVNQALIDLIK 319
++ G D +A +L E L + + G H +S + + + A+ +I+
Sbjct: 210 HILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIE 267
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 50.4 bits (119), Expect = 5e-07
Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 15/135 (11%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G +LI + + D ++I+ G V D R
Sbjct: 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLAR-----NGFNVYTIDYR 102
Query: 95 GMGRS-----SVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLA 145
+ D+ ++ + G ++ ++ G S G + A +
Sbjct: 103 THYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYS 162
Query: 146 AM-VPERVLSLALLN 159
++ + L LL+
Sbjct: 163 SLYWKNDIKGLILLD 177
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 41/298 (13%), Positives = 84/298 (28%), Gaps = 69/298 (23%)
Query: 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83
G + FY GP V+L+ G GT + P + A
Sbjct: 30 GAEPFY--AENGPVGVLLVHGFTGTPHSMRPLAEAYAK---------------------- 65
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIA 141
AG VC +G G +++T + V L + V G SMG +
Sbjct: 66 AGYTVCLPRLKGHGTHYEDMERTTFHD--WVASVEEGYGWLKQRCQTIFVTGLSMGGTLT 123
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
LA P+ + + +D+ ++ + + +
Sbjct: 124 LYLAEHHPDICGIVPI----------NAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPD 173
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
+ L Y K +A+ +Q + T+ + I
Sbjct: 174 VKEL---------------AYEKTPTASLLQLA----------RLMAQTKAKLDRIVCP- 207
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHER-TEEVNQALID 316
+ D + A + + + ++ L H+ + + + + ++
Sbjct: 208 --ALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLE 263
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 21/124 (16%), Positives = 33/124 (26%), Gaps = 30/124 (24%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+ + G G+ + + G G FD RG
Sbjct: 31 VLFVHGWGGSQHHSLVRAREAVG----------------------LGCICMTFDLRGHEG 68
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHL---GW---KQAHVFGHSMGAMIACKLAAMVPERV 152
+ + D+ A D L + V G S G ++ L P
Sbjct: 69 YASMRQSVTRAQ--NLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEW 126
Query: 153 LSLA 156
L+L
Sbjct: 127 LALR 130
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 8e-05
Identities = 34/238 (14%), Positives = 74/238 (31%), Gaps = 16/238 (6%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIAC 142
AG +V A D G +++ T ++ LM+ L ++ + GHS+G M
Sbjct: 30 AGHKVTALDLAASGTDLRKIEEL-RTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLG 88
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
P+++ + L P + + ++ E + S
Sbjct: 89 LAMEKYPQKIYAAVFLA------AFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSP 142
Query: 203 E--YLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
E + G LYQ A + + +M +++ T
Sbjct: 143 EEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLV-----RPSSLFMEDLSKAKYFTDERF 197
Query: 261 GFL-VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDL 317
G + I D + R + + + H+ +++ +L+++
Sbjct: 198 GSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEI 255
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 9e-05
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVF-GHSMGAMIAC 142
G D + + + ++ + K V G S+G+ IA
Sbjct: 32 LGWTHERPDFTDLDARRDL--GQLGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAA 89
Query: 143 KLAAMVPERVLSL 155
+++ VP R L L
Sbjct: 90 QVSLQVPTRALFL 102
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 Length = 377 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 35/163 (21%), Positives = 53/163 (32%), Gaps = 46/163 (28%)
Query: 23 NGIKIFYRTYGR-GPTK--VILI-TGLAGTHDAWGPQLK-----GLAGTDKPNDDDE--- 70
+ I + Y+TYG K +LI L G + + + G D D
Sbjct: 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFF 101
Query: 71 ---TILQDSVESGDGGAGIEVCAFDNRGMG----RSSVPVKKTEY-------TTKIMAKD 116
+L GG C G S P Y + + K
Sbjct: 102 ISSNVL--------GG-----C------KGTTGPSSINPQTGKPYGSQFPNIVVQDIVKV 142
Query: 117 VIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALL 158
AL++HLG + G S G M A + A P+ + ++ L
Sbjct: 143 QKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNL 185
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} Length = 377 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 39/161 (24%), Positives = 58/161 (36%), Gaps = 36/161 (22%)
Query: 25 IKIFYRTYGR-GPTK--VILI-TGLAGTHDAWGPQLK---------GLAGTDKPNDDDE- 70
+++ Y TYG + VILI + T A G GL G K D ++
Sbjct: 27 VQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQY 86
Query: 71 -TILQDSVESGDGGAGIEVCAFDNRGM---GRSSV-PVKKTEY-------TTKIMAKDVI 118
I D++ N + G S+ P EY T +A+
Sbjct: 87 FVICTDNL----CN-----VQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQC 137
Query: 119 ALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALL 158
L+ +G + H V G S G MIA + A P V + +
Sbjct: 138 ELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGV 178
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 5e-04
Identities = 44/350 (12%), Positives = 105/350 (30%), Gaps = 60/350 (17%)
Query: 73 LQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVF 132
L+ ++ + + G+ S KT +A DV +F
Sbjct: 140 LRQALLELRPAKNVLID-----GVLGSG----KT-----WVALDVCLSYKVQCKMDFKIF 185
Query: 133 GHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC-----PKLDLQTLSIAIRFFRAKT 187
++ C V E + L L + KL + ++ +R
Sbjct: 186 WLNLKN---CNSPETVLEMLQKL-LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241
Query: 188 PEKRAAVDLDTHYSQEYLEEYVGSS----TRRAILYQEYVKGISATGMQSNYGFDG---- 239
P + + L + + + S T R +++ + T + ++
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301
Query: 240 ---QIHACWMHKMTQKDI--QTIRSAGFLVSVIHGR--HDVIAQICYARRL-AEKLYPVA 291
+ ++ +D+ + + + +S+I D +A + + +KL
Sbjct: 302 EVKSLLLKYLD-CRPQDLPREVLTTNPRRLSII-AESIRDGLATWDNWKHVNCDKL---T 356
Query: 292 RMIDLPGGHLVSHERTEEVNQALIDL-IKASEKKISPQD----WTNLPQTSSGVLAKGMS 346
+I+ ++ E + L + I W ++ ++ V+
Sbjct: 357 TIIESS----LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN--K 410
Query: 347 FVRTSSGPRSYVSGPLEKLHLYLLYLCGLFLLAFEYA--RRLLQSLKPVR 394
+ S + + + +YL L EYA R ++ +
Sbjct: 411 LHKYSLVEKQPKES---TISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 6e-04
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIAC 142
AG +V A D G + + +T + ++ ++ +M + ++ + GHS G M
Sbjct: 36 AGHKVTAVDLSAAGINPRRLD-EIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLG 94
Query: 143 KLAAMVPERVLSLALLN 159
PE++ ++
Sbjct: 95 LAMETYPEKISVAVFMS 111
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 39.3 bits (92), Expect = 6e-04
Identities = 15/122 (12%), Positives = 33/122 (27%), Gaps = 27/122 (22%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+++ G+ G + L G
Sbjct: 6 VVMVHGIGGASFNFAGIKSYLVS----------------------QGWSRDKLYAVDFWD 43
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLA 156
+ ++++ V ++D G K+ + HSMG + +V ++
Sbjct: 44 KTGTN---YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 100
Query: 157 LL 158
L
Sbjct: 101 TL 102
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 405 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.98 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.98 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.98 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.98 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.98 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.98 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.97 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.97 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.97 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.97 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.97 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.97 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.97 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.97 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.97 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.97 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.94 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.96 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.96 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.96 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.96 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.95 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.95 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.95 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.95 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.95 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.94 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.94 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.93 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.93 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.93 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.93 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.93 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.92 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.92 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.92 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.92 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.92 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.92 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.92 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.92 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.91 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.91 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.91 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.91 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.91 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.91 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.9 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.9 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.9 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.9 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.9 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.9 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.9 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.9 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.89 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.89 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.88 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.88 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.88 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.88 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.88 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.87 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.87 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.87 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.87 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.87 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.87 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.86 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.86 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.85 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.85 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.85 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.85 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.85 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.85 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.84 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.84 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.84 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.84 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.84 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.83 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.83 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.83 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.82 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.82 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.82 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.82 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.82 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.82 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.82 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.81 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.81 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.81 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.81 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.8 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.8 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.8 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.79 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.79 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.79 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.79 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.79 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.79 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.78 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.77 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.77 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.76 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.76 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.75 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.75 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.75 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.75 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.74 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.73 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.73 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.73 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.73 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.72 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.72 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.72 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.72 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.71 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.71 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.71 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.7 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.7 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.69 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.69 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.68 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.68 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.66 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.66 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.65 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.63 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.62 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.62 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.62 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.62 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.61 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.61 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.59 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.58 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.58 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.56 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.55 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.55 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.54 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.52 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.47 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.46 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.44 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.42 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.42 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.37 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.34 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.25 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.15 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.12 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.87 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.7 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.63 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.58 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.56 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.45 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.45 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.38 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.33 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.31 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.26 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.24 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.23 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.22 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.01 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.99 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.9 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.86 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.72 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.53 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.51 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.37 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.33 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.32 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.32 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.29 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.22 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.21 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.2 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.95 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 96.76 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.61 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.46 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.13 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.05 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.65 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 95.4 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 95.37 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 95.26 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 94.68 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 94.64 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 94.57 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 94.12 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 93.63 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 92.92 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 92.4 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 92.38 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 91.77 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 88.08 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 85.95 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=280.95 Aligned_cols=257 Identities=25% Similarity=0.320 Sum_probs=180.4
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+.+.||.+|+|...|+ +.|+|||+||++++...|.++++.|.+ +|+|+++|+|||
T Consensus 8 ~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~D~rG~ 64 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTR-----------------------HFRVLRYDARGH 64 (266)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGGGGHHHHHT-----------------------TCEEEEECCTTS
T ss_pred EEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHHHHHHHHHhhc-----------------------CcEEEEEcCCCC
Confidence 34678999999999997 467899999999999999999999998 899999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|+.+.. .++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+.... .....
T Consensus 65 G~S~~~~~--~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~-----~~~~~ 137 (266)
T 3om8_A 65 GASSVPPG--PYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGP-----AAQWD 137 (266)
T ss_dssp TTSCCCCS--CCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCC-----SHHHH
T ss_pred CCCCCCCC--CCCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCc-----hhHHH
Confidence 99987664 689999999999999999999999999999999999999999999999999997642110 00000
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
.......................+...+.. ... ...+.+...+.... ...+...+.. ....+..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~d~~~~ 203 (266)
T 3om8_A 138 ERIAAVLQAEDMSETAAGFLGNWFPPALLE----RAE---PVVERFRAMLMATN---RHGLAGSFAA----VRDTDLRAQ 203 (266)
T ss_dssp HHHHHHHHCSSSHHHHHHHHHHHSCHHHHH----SCC---HHHHHHHHHHHTSC---HHHHHHHHHH----HHTCBCTTT
T ss_pred HHHHHHHccccHHHHHHHHHHHhcChhhhh----cCh---HHHHHHHHHHHhCC---HHHHHHHHHH----hhccchhhH
Confidence 111111110000000000000001111100 000 01111111111000 0000111111 111233456
Q ss_pred hhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHH
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~ 319 (405)
+.++++|+|+|+|++|.++|++.++.+++.+ |+++++++++||++++|+|++|++.|.+||+
T Consensus 204 l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~i-p~a~~~~i~~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 204 LARIERPTLVIAGAYDTVTAASHGELIAASI-AGARLVTLPAVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp GGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEEEEESCCSCHHHHCHHHHHHHHHHHHT
T ss_pred hcCCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCccccCHHHHHHHHHHHhc
Confidence 7889999999999999999999999999987 9999999998999999999999999999985
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=267.80 Aligned_cols=257 Identities=25% Similarity=0.364 Sum_probs=178.3
Q ss_pred cccccCCEEEEEEEccC-C--CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGR-G--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~--~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+++.+|.+++|...|+ + +|+|||+||++++...|.++++.|.+ +|+|+++|+|
T Consensus 5 ~~~~~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~ 61 (266)
T 2xua_A 5 PYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSK-----------------------HFRVLRYDTR 61 (266)
T ss_dssp CEEECSSSEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHT-----------------------TSEEEEECCT
T ss_pred CeEEECCEEEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhc-----------------------CeEEEEecCC
Confidence 34667899999999996 4 57899999999999999999999987 8999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|||.|+.+.. .++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... + .
T Consensus 62 G~G~S~~~~~--~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~--~----~ 133 (266)
T 2xua_A 62 GHGHSEAPKG--PYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGS--P----E 133 (266)
T ss_dssp TSTTSCCCSS--CCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSC--H----H
T ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCc--h----H
Confidence 9999987653 689999999999999999999999999999999999999999999999999998642110 0 0
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
.+.......................+...+.. ......+.+...+.... ...+........ ..+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~ 199 (266)
T 2xua_A 134 VWVPRAVKARTEGMHALADAVLPRWFTADYME-------REPVVLAMIRDVFVHTD---KEGYASNCEAID----AADLR 199 (266)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHSCHHHHH-------HCHHHHHHHHHHHHTSC---HHHHHHHHHHHH----HCCCG
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHcCccccc-------CCHHHHHHHHHHHhhCC---HHHHHHHHHHHh----ccCch
Confidence 01000000000000000000000000010000 00111111111111100 000000111100 01223
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+.+.++++|+|+|+|++|.++|++.++++++.+ ++++++++++||+++.|+|+++++.|.+||++
T Consensus 200 ~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 200 PEAPGIKVPALVISGTHDLAATPAQGRELAQAI-AGARYVELDASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp GGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEEEEESCCSSHHHHTHHHHHHHHHHHHTC
T ss_pred hhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhC-CCCEEEEecCCCCchhcCHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999987 88999999999999999999999999999964
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=268.01 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=178.5
Q ss_pred cccccC--C---EEEEEEEccCCCCeEEEEecCC---CCCCchhhhH-hhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 18 AALNDN--G---IKIFYRTYGRGPTKVILITGLA---GTHDAWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 18 ~~~~~~--g---~~i~y~~~G~~~p~vvllHG~~---~~~~~~~~~~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
++++++ | .+++|...|++ |+|||+||++ ++...|.+++ +.|.+ +|+|
T Consensus 11 ~~~~~~~~g~~~~~l~y~~~G~g-~~vvllHG~~~~~~~~~~w~~~~~~~L~~-----------------------~~~v 66 (286)
T 2puj_A 11 KFVKINEKGFSDFNIHYNEAGNG-ETVIMLHGGGPGAGGWSNYYRNVGPFVDA-----------------------GYRV 66 (286)
T ss_dssp EEEEECSTTCSSEEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHHHT-----------------------TCEE
T ss_pred eEEEecCCCcceEEEEEEecCCC-CcEEEECCCCCCCCcHHHHHHHHHHHHhc-----------------------cCEE
Confidence 456777 8 99999999986 4699999998 7777899999 99987 7999
Q ss_pred EEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+++|+||||.|+.+.. ..++++++++|+.++++++++++++|+||||||++|+.+|.++|++|+++|++++.+......
T Consensus 67 i~~D~~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~ 145 (286)
T 2puj_A 67 ILKDSPGFNKSDAVVM-DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF 145 (286)
T ss_dssp EEECCTTSTTSCCCCC-SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS
T ss_pred EEECCCCCCCCCCCCC-cCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcc
Confidence 9999999999987653 268999999999999999999999999999999999999999999999999999875322111
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
....................... ..++........ ................ .. ............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~ 211 (286)
T 2puj_A 146 APMPMEGIKLLFKLYAEPSYETL----------KQMLQVFLYDQSLITEELLQGRWEAIQRQ-PE---HLKNFLISAQKA 211 (286)
T ss_dssp SCSSCHHHHHHHHHHHSCCHHHH----------HHHHHHHCSCGGGCCHHHHHHHHHHHHHC-HH---HHHHHHHHHHHS
T ss_pred cccchhhHHHHHHHhhCCcHHHH----------HHHHHHHhcCCccCCHHHHHHHHHHhhcC-HH---HHHHHHHHHhhh
Confidence 11011111111111111110000 001111110000 0001111110000000 00 000000000000
Q ss_pred c-cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 248 K-MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 248 ~-~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
. ...+..+.++++++|+|+|+|++|.++|++.++++++.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 212 ~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 212 PLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp CGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHS-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred hccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 0 011223567788999999999999999999999999987 8999999998 9999999999999999999975
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=274.27 Aligned_cols=270 Identities=17% Similarity=0.203 Sum_probs=181.5
Q ss_pred CcccccCCEEEEEEEccCCC-CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 17 DAALNDNGIKIFYRTYGRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~-p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..+++.+|.+++|.+.|+++ |+|||+||++++...|.++++.|.+ +|+||++|+||
T Consensus 9 ~~~~~~~g~~l~y~~~G~g~~~pvvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~G 65 (316)
T 3afi_E 9 IRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSP-----------------------VAHCIAPDLIG 65 (316)
T ss_dssp -CEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGGTTTHHHHTT-----------------------TSEEEEECCTT
T ss_pred ceeEEeCCEEEEEEEeCCCCCCeEEEECCCCCchHHHHHHHHHHhh-----------------------CCEEEEECCCC
Confidence 34577899999999999864 2699999999999999999999987 79999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC--CCCCcc--c
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG--FQCCPK--L 171 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~~~~--~ 171 (405)
||.|+.+. ..|+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++..+. ....+. .
T Consensus 66 ~G~S~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 143 (316)
T 3afi_E 66 FGQSGKPD--IAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEV 143 (316)
T ss_dssp STTSCCCS--SCCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCC
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhh
Confidence 99998754 37899999999999999999999999999999999999999999999999999974321 111110 0
Q ss_pred -hh----HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhC---CCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 172 -DL----QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG---SSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 172 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
.. .........+............. ..+...... ...........+...+.... .......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 212 (316)
T 3afi_E 144 AEEQDHAEAARAVFRKFRTPGEGEAMILEA-----NAFVERVLPGGIVRKLGDEEMAPYRTPFPTPE------SRRPVLA 212 (316)
T ss_dssp GGGHHHHHHHHHHHHHHTSTTHHHHHHTTS-----CHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTG------GGHHHHH
T ss_pred ccccccchhHHHHHHHhcCCchhhHHHhcc-----chHHHHhcccccCCCCCHHHHHHHHhhcCCcc------chhHHHH
Confidence 00 01111111111111000000000 000100000 00001111122221110000 0000000
Q ss_pred hhhc-----------ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHH
Q 015550 244 CWMH-----------KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVN 311 (405)
Q Consensus 244 ~~~~-----------~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~ 311 (405)
.... ....+..+.+.++++|+|+|+|++|.++|++.++.+.+.+ |+++++++++ ||++++|+|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~GH~~~~e~p~~~~ 291 (316)
T 3afi_E 213 FPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASL-TRCALIRLGAGLHYLQEDHADAIG 291 (316)
T ss_dssp TGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-SSEEEEEEEEECSCHHHHHHHHHH
T ss_pred HHHhccccccchhhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhC-CCCeEEEcCCCCCCchhhCHHHHH
Confidence 0000 0001123456778999999999999999999999999986 9999999998 9999999999999
Q ss_pred HHHHHHHHhhcC
Q 015550 312 QALIDLIKASEK 323 (405)
Q Consensus 312 ~~i~~fl~~~~~ 323 (405)
+.|.+||++...
T Consensus 292 ~~i~~fl~~~~~ 303 (316)
T 3afi_E 292 RSVAGWIAGIEA 303 (316)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhhcCC
Confidence 999999987654
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=266.68 Aligned_cols=263 Identities=20% Similarity=0.287 Sum_probs=171.7
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.+++.||.+|+|...|+++ +|||+||++++...|..+++.|.+ +||+|+++|+||||
T Consensus 2 ~~~~~~g~~l~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G 58 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGSGK-PVLFSHGWLLDADMWEYQMEYLSS----------------------RGYRTIAFDRRGFG 58 (271)
T ss_dssp EEECTTSCEEEEEEESSSS-EEEEECCTTCCGGGGHHHHHHHHT----------------------TTCEEEEECCTTST
T ss_pred eEEcCCCCEEEEEccCCCC-eEEEECCCCCcHHHHHHHHHHHHh----------------------CCceEEEecCCCCc
Confidence 3467799999999999875 599999999999999999999987 49999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCCcc----ch
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPK----LD 172 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~----~~ 172 (405)
.|+.+.. .++++++++|+.+++++++.++++|+||||||++++.+++.+ |++|+++|++++..+.....+. ..
T Consensus 59 ~S~~~~~--~~~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 136 (271)
T 3ia2_A 59 RSDQPWT--GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP 136 (271)
T ss_dssp TSCCCSS--CCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBC
T ss_pred cCCCCCC--CCCHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCccccc
Confidence 9987654 679999999999999999999999999999999777766654 9999999999976432211111 11
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
..................... +...+........ ................. ....... .......+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~ 202 (271)
T 3ia2_A 137 LDVFARFKTELLKDRAQFISD------FNAPFYGINKGQV-VSQGVQTQTLQIALLAS------LKATVDC-VTAFAETD 202 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------HHHHHHTGGGTCC-CCHHHHHHHHHHHHHSC------HHHHHHH-HHHHHHCB
T ss_pred HHHHHHHHHHHHhhHHHHHHH------hhHhhhccccccc-cCHHHHHHHHhhhhhcc------HHHHHHH-HHHhhccC
Confidence 111111100000000000000 0000000000000 00000000000000000 0000000 00000112
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+.+.++++|+|+|+|++|.++|++...++...+.++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 203 ~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 203 FRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp CHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred CcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHHHhh
Confidence 3355778999999999999999999875555544559999999998 999999999999999999985
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=270.26 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=171.2
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
.+.+|.+++|.+.|+++ +|||+||++++...|..+++.|.+ +||+|+++|+||||.|
T Consensus 12 ~~~~g~~l~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G~S 68 (281)
T 3fob_A 12 ENQAPIEIYYEDHGTGK-PVVLIHGWPLSGRSWEYQVPALVE----------------------AGYRVITYDRRGFGKS 68 (281)
T ss_dssp ETTEEEEEEEEEESSSE-EEEEECCTTCCGGGGTTTHHHHHH----------------------TTEEEEEECCTTSTTS
T ss_pred CCCCceEEEEEECCCCC-eEEEECCCCCcHHHHHHHHHHHHh----------------------CCCEEEEeCCCCCCCC
Confidence 45689999999999875 599999999999999999999976 3899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh-CCcccceEEEeccCCCCCCC---Ccc--chh
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQC---CPK--LDL 173 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~---~~~--~~~ 173 (405)
+.+.. .++++++++|+.+++++++.++++|+||||||++++.+++. +|++|+++|++++.++.... .+. ...
T Consensus 69 ~~~~~--~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 146 (281)
T 3fob_A 69 SQPWE--GYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDD 146 (281)
T ss_dssp CCCSS--CCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCH
T ss_pred CCCcc--ccCHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccch
Confidence 87654 78999999999999999999999999999999988877666 48999999999976432211 010 000
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCC----CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS----STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
................ +...+...++.. ................... .......+.. ..
T Consensus 147 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~ 209 (281)
T 3fob_A 147 ATIETFKSGVINDRLA----------FLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGAS---PKGTLDCITA----FS 209 (281)
T ss_dssp HHHHHHHHHHHHHHHH----------HHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSC---HHHHHHHHHH----HH
T ss_pred hHHHHHHHHhhhhHHH----------HHHHHHHHhcccccccccchHHHHHHhhhhhcccC---hHHHHHHHHH----cc
Confidence 1111100000000000 000000011000 0000000000000000000 0000000000 01
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+..+.+.++++|||+|+|++|.++|++.. +.+.+.+ |+++++++++ ||+++.|+|+++++.|.+||+
T Consensus 210 ~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 210 KTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAI-PNSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp HCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred ccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhC-CCceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 1223456788999999999999999999866 5555654 9999999998 999999999999999999985
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=266.25 Aligned_cols=264 Identities=17% Similarity=0.191 Sum_probs=174.9
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCC-chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+++.+|.+++|...|+ ..|+|||+||++++.. .|.++++.|.+ +|+|+++|+||
T Consensus 6 ~~~~~~g~~l~~~~~G~~~~~~vvllHG~~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G 62 (286)
T 2yys_A 6 GYVPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLE-----------------------GFRVVYFDQRG 62 (286)
T ss_dssp EEEECSSCEEEEEEESCTTSCEEEEECCTTTCCSHHHHHHHGGGCT-----------------------TSEEEEECCTT
T ss_pred eEEeECCEEEEEEeecCCCCCEEEEECCCCCcchhHHHHHHHHhcC-----------------------CCEEEEECCCC
Confidence 45778999999999995 4467999999999999 89999999976 99999999999
Q ss_pred CCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 96 MGRSSV-PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~G~S~~-~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
||.|+. +.....++++++++|+.+++++++.++++|+||||||.+|+.+|.++|+ |+++|++++.. + ....
T Consensus 63 ~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~-~------~~~~ 134 (286)
T 2yys_A 63 SGRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWV-N------FPWL 134 (286)
T ss_dssp STTSCCCCSCGGGCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCC-B------HHHH
T ss_pred CCCCCCCccCcccCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCcc-C------cHHH
Confidence 999986 4321268999999999999999999999999999999999999999999 99999999863 1 1110
Q ss_pred HHHHHHHHh---hccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 175 TLSIAIRFF---RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 175 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
........ .......................... .................... ........+ .+......
T Consensus 135 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~ 208 (286)
T 2yys_A 135 -AARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLM-FPTPRGRMAYEWLAEGAGIL--GSDAPGLAF--LRNGLWRL 208 (286)
T ss_dssp -HHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHH-CSSHHHHHHHHHHHHHTTCC--CCSHHHHHH--HHTTGGGC
T ss_pred -HHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhh-ccCCccccChHHHHHHHhhc--cccccchhh--cccccccC
Confidence 00000000 00000000000000000001111111 00000000011111100000 000000000 00100111
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+..+.+.++++|+|+|+|++|.+++++ ++++++ + ++++++++++ ||+++.|+|+++++.|.+|+++.
T Consensus 209 ~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 209 DYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS-R-LRAPIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp BCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH-H-HTCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred ChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh-C-CCCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 234557788999999999999999999 999999 7 8999999998 99999999999999999999864
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=267.40 Aligned_cols=256 Identities=19% Similarity=0.255 Sum_probs=171.9
Q ss_pred EEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 26 KIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 26 ~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
.|+|...|+ +.|+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+
T Consensus 2 ~i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~ 58 (268)
T 3v48_A 2 HMKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQ-----------------------EYQVVCYDQRGTGNNPDT 58 (268)
T ss_dssp CSCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHT-----------------------TSEEEECCCTTBTTBCCC
T ss_pred ceEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhh-----------------------cCeEEEECCCCCCCCCCC
Confidence 367888885 357899999999999999999999987 899999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (405)
.. ..++++++++|+.++++++++++++|+||||||++|+.+|.++|++|+++|++++..... .............
T Consensus 59 ~~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~~~ 133 (268)
T 3v48_A 59 LA-EDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRIN----AHTRRCFQVRERL 133 (268)
T ss_dssp CC-TTCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCC----HHHHHHHHHHHHH
T ss_pred cc-ccCCHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccc----hhhhHHHHHHHHH
Confidence 43 368999999999999999999999999999999999999999999999999999753211 0000000000000
Q ss_pred hhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 183 FRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
+................+...+.... . ............. ......+...+.... ..+..+.+.+++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~d~~~~l~~i~~ 201 (268)
T 3v48_A 134 LYSGGAQAWVEAQPLFLYPADWMAAR----A--PRLEAEDALALAH--FQGKNNLLRRLNALK----RADFSHHADRIRC 201 (268)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHTT----H--HHHHHHHHHHHHT--CCCHHHHHHHHHHHH----HCBCTTTGGGCCS
T ss_pred HhccchhhhhhhhhhhcCchhhhhcc----c--ccchhhHHHHHhh--cCchhHHHHHHHHHh----ccchhhhhhcCCC
Confidence 00000000000000000001111000 0 0000000000000 000000011111111 1122345778999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
|||+|+|++|.++|++.++++++.+ |+++++++++ ||++++|+|+++++.|.+||.+..
T Consensus 202 P~Lii~G~~D~~~p~~~~~~l~~~~-p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 202 PVQIICASDDLLVPTACSSELHAAL-PDSQKMVMPYGGHACNVTDPETFNALLLNGLASLL 261 (268)
T ss_dssp CEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEESSCCTTHHHHCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCcccCHHHHHHHHHhC-CcCeEEEeCCCCcchhhcCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999987 9999999997 999999999999999999998753
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=273.56 Aligned_cols=265 Identities=16% Similarity=0.178 Sum_probs=177.4
Q ss_pred CCcccccCC----EEEEEEEccC-C-CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 16 PDAALNDNG----IKIFYRTYGR-G-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 16 ~~~~~~~~g----~~i~y~~~G~-~-~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
..++++++| .+++|.+.|+ + .|+|||+||++++...|.++++.|.+ .||+||
T Consensus 21 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~rvi 78 (310)
T 1b6g_A 21 SPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAE----------------------SGARVI 78 (310)
T ss_dssp CCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHH----------------------TTCEEE
T ss_pred CceEEEecCCccceEEEEEEeCCCCCCCEEEEECCCCCchhhHHHHHHHHHh----------------------CCCeEE
Confidence 345677888 9999999994 3 46799999999999999999999987 379999
Q ss_pred EecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC-
Q 015550 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC- 168 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~- 168 (405)
++|+||||.|+.+.....|+++++++|+.++++++++++++|+||||||++|+.+|.++|++|++||++++........
T Consensus 79 a~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~ 158 (310)
T 1b6g_A 79 APDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQ 158 (310)
T ss_dssp EECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTC
T ss_pred EeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccc
Confidence 9999999999876533478999999999999999999999999999999999999999999999999999853100000
Q ss_pred c------cchhHHHHHHHHHhhccChhhhhccCcccccCH-hHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhh
Q 015550 169 P------KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ-EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQI 241 (405)
Q Consensus 169 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (405)
+ ................ .+. ... ....... ..........+...+....... ... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 222 (310)
T 1b6g_A 159 PAFSAFVTQPADGFTAWKYDLVT-PSD----------LRLDQFMKRWA--PTLTEAEASAYAAPFPDTSYQA--GVR-KF 222 (310)
T ss_dssp THHHHTTTSSTTTHHHHHHHHHS-CSS----------CCHHHHHHHHS--TTCCHHHHHHHHTTCSSGGGCH--HHH-HH
T ss_pred cchhhhhhccchHHHHHHHHhcc-Cch----------hhhhhHHhhcC--CCCCHHHHHHHhcccCCccchH--HHH-HH
Confidence 0 0000000000111100 000 000 0000000 0000111111111110000000 000 00
Q ss_pred HHhhhc------ccChhhhhhhh-hcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEc--CC-CccccccCHHHHH
Q 015550 242 HACWMH------KMTQKDIQTIR-SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL--PG-GHLVSHERTEEVN 311 (405)
Q Consensus 242 ~~~~~~------~~~~~~~~~l~-~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~--~g-gH~~~~e~p~~v~ 311 (405)
...... ....+..+.+. .+++|+|+|+|++|.++| +.++.+++.+ |+++++++ ++ ||++++ +|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~i-p~~~~~~i~~~~~GH~~~~-~p~~~~ 299 (310)
T 1b6g_A 223 PKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKAL-INGCPEPLEIADAGHFVQE-FGEQVA 299 (310)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHH-STTCCCCEEETTCCSCGGG-GHHHHH
T ss_pred HHHhcccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhc-ccccceeeecCCcccchhh-ChHHHH
Confidence 000000 00012235677 899999999999999999 8889999887 88888877 87 999999 999999
Q ss_pred HHHHHHHHhh
Q 015550 312 QALIDLIKAS 321 (405)
Q Consensus 312 ~~i~~fl~~~ 321 (405)
+.|.+||++.
T Consensus 300 ~~i~~Fl~~~ 309 (310)
T 1b6g_A 300 REALKHFAET 309 (310)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcc
Confidence 9999999764
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=262.45 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=176.4
Q ss_pred ccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
..+|.+|+|.+.|+++ +|||+||++++...|.++++.|.+ +||+|+++|+||||.|+
T Consensus 9 ~~~g~~l~y~~~g~g~-pvvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G~G~S~ 65 (277)
T 1brt_A 9 NSTSIDLYYEDHGTGQ-PVVLIHGFPLSGHSWERQSAALLD----------------------AGYRVITYDRRGFGQSS 65 (277)
T ss_dssp TTEEEEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTSC
T ss_pred cCCCcEEEEEEcCCCC-eEEEECCCCCcHHHHHHHHHHHhh----------------------CCCEEEEeCCCCCCCCC
Confidence 5689999999999765 599999999999999999999987 38999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCC---Ccc--chhH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQC---CPK--LDLQ 174 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~---~~~--~~~~ 174 (405)
.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|+ +|+++|++++..+.... .+. ....
T Consensus 66 ~~~--~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 143 (277)
T 1brt_A 66 QPT--TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQE 143 (277)
T ss_dssp CCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHH
T ss_pred CCC--CCccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHH
Confidence 765 378999999999999999999999999999999999999999999 99999999985432110 000 0111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhC-----CCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG-----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
................. ..+...++. ...........+......... .. ....... .
T Consensus 144 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~-~ 205 (277)
T 1brt_A 144 FFDGIVAAVKADRYAFY----------TGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGF------FA-AAAAPTT-W 205 (277)
T ss_dssp HHHHHHHHHHHCHHHHH----------HHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCH------HH-HHHGGGG-T
T ss_pred HHHHHHHHHhcCchhhH----------HHHHHHHhhccccccccCCHHHHHHHHHHHhccch------HH-HHHHHHH-H
Confidence 11111111100000000 000000000 000011111111111111000 00 0000000 1
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+..+.+.++++|+|+|+|++|.++|++.+ +.+++.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 206 ~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 206 YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp TCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred hccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHC-CCCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 1223346778899999999999999999888 8888876 8999999998 9999999999999999999963
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-35 Score=266.66 Aligned_cols=255 Identities=22% Similarity=0.363 Sum_probs=176.4
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCCCCCC---chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.++++.+|.+++|.+.|+++ +|||+||++.+.. .|..+++.|.+ +|+|+++|+
T Consensus 7 ~~~~~~~g~~l~y~~~G~g~-~vvllHG~~~~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl 62 (282)
T 1iup_A 7 GKSILAAGVLTNYHDVGEGQ-PVILIHGSGPGVSAYANWRLTIPALSK-----------------------FYRVIAPDM 62 (282)
T ss_dssp CEEEEETTEEEEEEEECCSS-EEEEECCCCTTCCHHHHHTTTHHHHTT-----------------------TSEEEEECC
T ss_pred cceEEECCEEEEEEecCCCC-eEEEECCCCCCccHHHHHHHHHHhhcc-----------------------CCEEEEECC
Confidence 45688899999999999765 6999999987665 78888888866 999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
||||.|+.+.. ..++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+......
T Consensus 63 ~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~----- 136 (282)
T 1iup_A 63 VGFGFTDRPEN-YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVT----- 136 (282)
T ss_dssp TTSTTSCCCTT-CCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCC-----
T ss_pred CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCC-----
Confidence 99999987653 368999999999999999999999999999999999999999999999999999875322110
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHH-------hh
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHA-------CW 245 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 245 (405)
........+ ....... ..++........ ................. ....+.. .+
T Consensus 137 ~~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 198 (282)
T 1iup_A 137 EGLNAVWGY--TPSIENM----------RNLLDIFAYDRSLVTDELARLRYEASIQPG------FQESFSSMFPEPRQRW 198 (282)
T ss_dssp HHHHHHHTC--CSCHHHH----------HHHHHHHCSSGGGCCHHHHHHHHHHHTSTT------HHHHHHHHSCSSTHHH
T ss_pred HHHHHHhcC--CCcHHHH----------HHHHHHhhcCcccCCHHHHHHHHhhccChH------HHHHHHHHHhcccccc
Confidence 011100000 0000000 000111000000 00011111000000000 0000000 00
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
...... ..+.+.++++|+|+|+|++|.++|++.++++++.+ ++++++++++ ||+++.|+|+++++.|.+||++.
T Consensus 199 ~~~~~~-~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 199 IDALAS-SDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp HHHHCC-CHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred cccccc-chhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCeEEEECCCCCCccccCHHHHHHHHHHHHhcC
Confidence 000000 11567889999999999999999999999999986 8999999998 99999999999999999999863
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=266.15 Aligned_cols=273 Identities=19% Similarity=0.206 Sum_probs=173.8
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
...+++.+|.+++|.+.|++ |+|||+||++++...|.++++.|++ .|+|+++|+||
T Consensus 10 ~~~~~~~~g~~l~y~~~G~g-~~lvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~G 65 (294)
T 1ehy_A 10 KHYEVQLPDVKIHYVREGAG-PTLLLLHGWPGFWWEWSKVIGPLAE-----------------------HYDVIVPDLRG 65 (294)
T ss_dssp CEEEEECSSCEEEEEEEECS-SEEEEECCSSCCGGGGHHHHHHHHT-----------------------TSEEEEECCTT
T ss_pred ceeEEEECCEEEEEEEcCCC-CEEEEECCCCcchhhHHHHHHHHhh-----------------------cCEEEecCCCC
Confidence 34567889999999999965 5699999999999999999999998 79999999999
Q ss_pred CCCCCCCCCC---CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 96 MGRSSVPVKK---TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 96 ~G~S~~~~~~---~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
||.|+.+ .. ..|+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...+... ....
T Consensus 66 ~G~S~~~-~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~-~~~~ 143 (294)
T 1ehy_A 66 FGDSEKP-DLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGP-VYFG 143 (294)
T ss_dssp STTSCCC-CTTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-------
T ss_pred CCCCCCC-ccccccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcch-hhcc
Confidence 9999875 21 15899999999999999999999999999999999999999999999999999975322210 0000
Q ss_pred hHHHH-HHHHHhhccChhhhhccCcc---cccCHhHHHhhhCC-CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 173 LQTLS-IAIRFFRAKTPEKRAAVDLD---THYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 173 ~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
..... .....+.............. ..+...+....... ........+.+...+....... ......... ..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~ 220 (294)
T 1ehy_A 144 LGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIH--GGFNYYRAN-IR 220 (294)
T ss_dssp -----CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHH--HHHHHHHHH-SS
T ss_pred chhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccc--hHHHHHHHH-Hh
Confidence 00000 00000000000000000000 00001111111110 0111111122222111100000 000000000 00
Q ss_pred ccChhh-hhhhhhcCCcEEEEeecCCccCC-HHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 248 KMTQKD-IQTIRSAGFLVSVIHGRHDVIAQ-ICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 248 ~~~~~~-~~~l~~i~~Pvlvi~G~~D~~~~-~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
...... ...+..+++|+|+|+|++|.++| ....+.+.+.+ ++++++++++ ||++++|+|+++++.|.+||
T Consensus 221 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 221 PDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYY-SNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp SSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHB-SSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred hhhhhcCCcccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHc-CCCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 000000 12355789999999999999998 46777777765 9999999998 99999999999999999997
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=266.83 Aligned_cols=262 Identities=20% Similarity=0.250 Sum_probs=178.6
Q ss_pred ccccCC-EEEEEEEccCCC-CeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 19 ALNDNG-IKIFYRTYGRGP-TKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 19 ~~~~~g-~~i~y~~~G~~~-p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
+++.+| .+++|.+.|+++ |+|||+||++ ++...|.++++.|.+ +|+|+++|+
T Consensus 17 ~~~~~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~-----------------------~~~via~Dl 73 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLAR-----------------------HFHVLAVDQ 73 (291)
T ss_dssp EEESSSEEEEEEEEECTTCSSEEEEECCCCTTCCHHHHTTTTHHHHTT-----------------------TSEEEEECC
T ss_pred EEEeCCcEEEEEEecCCCCCCcEEEECCCCCccchHHHHHHHHHHHHh-----------------------cCEEEEECC
Confidence 577899 999999999865 4799999998 777789999999987 799999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
||||.|+.+.. ..++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+...........
T Consensus 74 ~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 152 (291)
T 2wue_A 74 PGYGHSDKRAE-HGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPT 152 (291)
T ss_dssp TTSTTSCCCSC-CSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSC
T ss_pred CCCCCCCCCCC-CCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccc
Confidence 99999987653 36899999999999999999999999999999999999999999999999999987532211110001
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc-hhHHHHHHHHhhhhhccccCcccchhhhHH--hhhc--c
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHA--CWMH--K 248 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 248 (405)
.................. ..++........ ................. .+...+.. .+.. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 217 (291)
T 2wue_A 153 EGVKRLSKFSVAPTRENL----------EAFLRVMVYDKNLITPELVDQRFALASTPE-----SLTATRAMGKSFAGADF 217 (291)
T ss_dssp HHHHHHHHHHHSCCHHHH----------HHHHHTSCSSGGGSCHHHHHHHHHHHTSHH-----HHHHHHHHHHHHTSTTG
T ss_pred hhhHHHHHHhccCCHHHH----------HHHHHHhccCcccCCHHHHHHHHHHhcCch-----HHHHHHHHHhhcccccc
Confidence 111111111111110000 000110000000 00111111111000000 00000000 0000 0
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
......+.+.++++|+|+|+|++|.++|++.++++++.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 218 ~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 218 EAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTI-PRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp GGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHHHHS-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred ccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHHHHC-CCCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 001112567788999999999999999999999999876 8999999998 9999999999999999999964
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=268.09 Aligned_cols=256 Identities=14% Similarity=0.155 Sum_probs=173.8
Q ss_pred CcccccCC----EEEEEEEccC-C-CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 17 DAALNDNG----IKIFYRTYGR-G-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 17 ~~~~~~~g----~~i~y~~~G~-~-~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.++++++| .+++|.+.|+ . .|+|||+||++++...|.++++.|.+ +||+|++
T Consensus 21 ~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~rvia 78 (297)
T 2xt0_A 21 PHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTA----------------------AGGRVVA 78 (297)
T ss_dssp CEEECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGGGGTTTHHHHHH----------------------TTCEEEE
T ss_pred cEEEeccCCCCceEEEEEEccCCCCCCeEEEECCCCCcceeHHHHHHHHHh----------------------CCcEEEE
Confidence 45678888 9999999995 3 56799999999999999999999987 3799999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
+|+||||.|+.+.....|+++++++|+.++++++++++++|+||||||++|+.+|.++|++|+++|++++.. .....
T Consensus 79 ~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~-~~~~~-- 155 (297)
T 2xt0_A 79 PDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL-AVGLS-- 155 (297)
T ss_dssp ECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCC-CSSSC--
T ss_pred eCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCC-CcccC--
Confidence 999999999876533478999999999999999999999999999999999999999999999999999853 11111
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc---
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH--- 247 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 247 (405)
.............. .+.. .....+..... .........+...+.... .......+...
T Consensus 156 -~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 216 (297)
T 2xt0_A 156 -PGKGFESWRDFVAN-SPDL---------DVGKLMQRAIP--GITDAEVAAYDAPFPGPE------FKAGVRRFPAIVPI 216 (297)
T ss_dssp -SCHHHHHHHHHHHT-CTTC---------CHHHHHHHHST--TCCHHHHHHHHTTCSSGG------GCHHHHHGGGGSCC
T ss_pred -CchhHHHHHHHhhc-cccc---------chhHHHhccCc--cCCHHHHHHHhccccCcc------hhHHHHHHHHhCcc
Confidence 00011111111110 0000 00000000000 000111111111110000 00000000000
Q ss_pred -------ccChhhhhhhh-hcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEE--cCC-CccccccCHHHHHHHHHH
Q 015550 248 -------KMTQKDIQTIR-SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMID--LPG-GHLVSHERTEEVNQALID 316 (405)
Q Consensus 248 -------~~~~~~~~~l~-~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~--~~g-gH~~~~e~p~~v~~~i~~ 316 (405)
....+..+.+. .+++|+|+|+|++|.++| +..+++.+.+ |++++++ +++ ||++++ +|+++++.|.+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~-p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~ 293 (297)
T 2xt0_A 217 TPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQA-IRGCPEPMIVEAGGHFVQE-HGEPIARAALA 293 (297)
T ss_dssp STTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHH-STTCCCCEEETTCCSSGGG-GCHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHHHHhC-CCCeeEEeccCCCCcCccc-CHHHHHHHHHH
Confidence 00112335667 899999999999999999 8888899887 7777654 566 999999 99999999999
Q ss_pred HHH
Q 015550 317 LIK 319 (405)
Q Consensus 317 fl~ 319 (405)
||+
T Consensus 294 fl~ 296 (297)
T 2xt0_A 294 AFG 296 (297)
T ss_dssp HTT
T ss_pred HHh
Confidence 984
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=264.21 Aligned_cols=257 Identities=20% Similarity=0.241 Sum_probs=170.9
Q ss_pred ccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 21 NDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 21 ~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
..+|.+|+|..+|+ ..|+|||+||++++...|.++++.|.+ +||+|+++|+||||.|
T Consensus 6 ~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~D~~G~G~S 63 (276)
T 1zoi_A 6 TKDGVQIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLA----------------------HGYRVVAHDRRGHGRS 63 (276)
T ss_dssp CTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTS
T ss_pred CCCCcEEEEEecCCCCCCeEEEECCCCcchhHHHHHHHHHHh----------------------CCCEEEEecCCCCCCC
Confidence 45899999999995 346799999999999999999999987 3899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCC---c-cchhH
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCC---P-KLDLQ 174 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~---~-~~~~~ 174 (405)
+.+. ..++++++++|+.+++++++.++++|+||||||.+|+.+|+++ |++|+++|++++..+..... + .....
T Consensus 64 ~~~~--~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 141 (276)
T 1zoi_A 64 SQVW--DGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKS 141 (276)
T ss_dssp CCCS--SCCSHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHH
T ss_pred CCCC--CCCCHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHH
Confidence 8654 3689999999999999999999999999999999999988887 99999999999764321110 0 01111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHH-hhhC----CCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-EYVG----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
.................. .+.. .+.. ...........+........ ..... .......
T Consensus 142 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~ 204 (276)
T 1zoi_A 142 VFDGFQAQVASNRAQFYR----------DVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGS------AKAHY-DGIVAFS 204 (276)
T ss_dssp HHHHHHHHHHHCHHHHHH----------HHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSC------HHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHH----------HhhhccccccccccccccHHHHHHHHhhhhhhh------HHHHH-HHHHHhc
Confidence 111111100000000000 0000 0000 00000111111111000000 00000 0000001
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHH-HHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~-~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+..+.++++++|+|+|+|++|.++|++ ..+.+.+. .++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 205 ~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 205 QTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKL-LPNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp SCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred ccchhhhccccCCCEEEEEcCCCcccChHHHHHHHHhh-CCCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 12234567788999999999999999987 44555555 48999999998 999999999999999999985
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=261.27 Aligned_cols=259 Identities=14% Similarity=0.147 Sum_probs=171.0
Q ss_pred cccccCCEEEEEEEc--cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 18 AALNDNGIKIFYRTY--GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~--G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+++.+|.+++|.+. |+++|+|||+||++++...|.++++.|.+ +|+||++|+||
T Consensus 7 ~~~~~~g~~l~y~~~~~G~~~p~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~rvia~DlrG 63 (276)
T 2wj6_A 7 HETLVFDNKLSYIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELDA-----------------------DFRVIVPNWRG 63 (276)
T ss_dssp EEEEETTEEEEEEECCCCCSSCEEEEECCTTCCGGGGHHHHHHHTT-----------------------TSCEEEECCTT
T ss_pred eEEeeCCeEEEEEEecCCCCCCeEEEECCCCCcHHHHHHHHHHHhc-----------------------CCEEEEeCCCC
Confidence 346789999999999 87767899999999999999999999987 89999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCCccchhH
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
||.|+.+. ..|+++++++|+.++++++++++++|+||||||.+|+.+|.++ |++|+++|++++..... .+.
T Consensus 64 hG~S~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~--~~~---- 135 (276)
T 2wj6_A 64 HGLSPSEV--PDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAP--KPD---- 135 (276)
T ss_dssp CSSSCCCC--CCCCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSC--CHH----
T ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCC--Cch----
Confidence 99998764 3789999999999999999999999999999999999999999 99999999999753110 010
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc-ccChhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMTQKD 253 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 253 (405)
.... ........ .... ........+..... .....+.+......... ..+.......... ......
T Consensus 136 ~~~~-~~~~~~~~-~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 202 (276)
T 2wj6_A 136 FAKS-LTLLKDPE-RWRE-------GTHGLFDVWLDGHD-EKRVRHHLLEEMADYGY---DCWGRSGRVIEDAYGRNGSP 202 (276)
T ss_dssp HHHH-HHHHHCTT-THHH-------HHHHHHHHHHTTBC-CHHHHHHHHTTTTTCCH---HHHHHHHHHHHHHHHHHCCH
T ss_pred HHHH-hhhccCcc-hHHH-------HHHHHHHHhhcccc-hHHHHHHHHHHhhhcch---hhhhhccchhHHHHhhccch
Confidence 0000 00000000 0000 00001111111100 01111111111100000 0000000000000 000012
Q ss_pred hhhhhhcCCcEEEEeecCCccCC--HHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 254 IQTIRSAGFLVSVIHGRHDVIAQ--ICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 254 ~~~l~~i~~Pvlvi~G~~D~~~~--~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.+.+..+++|+++++|..|...+ ....+.+++.+ |+++++++++ ||++++|+|++|++.|.+||++.
T Consensus 203 ~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~-p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 203 MQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQH-PWFSYAKLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp HHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHC-TTEEEEECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred hhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhC-CCeEEEEeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 34567889999999875433222 24456777765 9999999998 99999999999999999999875
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=264.59 Aligned_cols=270 Identities=19% Similarity=0.248 Sum_probs=176.6
Q ss_pred CCcccccCCEEEEEEEccC--C---CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 16 PDAALNDNGIKIFYRTYGR--G---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~--~---~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
...++.++|.+++|+..|+ + .++|||+||++++...|..++..|.+. .+|+||+
T Consensus 29 ~~~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~---------------------~~~~Via 87 (330)
T 3nwo_A 29 SSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADE---------------------TGRTVIH 87 (330)
T ss_dssp CEEEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHH---------------------HTCCEEE
T ss_pred cceeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccc---------------------cCcEEEE
Confidence 4456889999999999997 2 226999999999999999999888730 1899999
Q ss_pred ecCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 91 FDNRGMGRSSVPV--KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 91 ~D~~G~G~S~~~~--~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+|+||||.|+..+ ....++.+.+++|+.++++++++++++|+||||||++|+.+|.++|++|.++|+++++..
T Consensus 88 ~D~rG~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~----- 162 (330)
T 3nwo_A 88 YDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPAS----- 162 (330)
T ss_dssp ECCTTSTTSCCCTTSCGGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSB-----
T ss_pred ECCCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcc-----
Confidence 9999999998632 223579999999999999999999999999999999999999999999999999997631
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccC----cccccCHh-------HHHhhhCC-CchhHHHHHHHHhhhhhc------c
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVD----LDTHYSQE-------YLEEYVGS-STRRAILYQEYVKGISAT------G 230 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~------~ 230 (405)
.. ...................... .......+ +....... ..........+....... .
T Consensus 163 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (330)
T 3nwo_A 163 --MR-LWSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMN 239 (330)
T ss_dssp --HH-HHHHHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHT
T ss_pred --hH-HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhccc
Confidence 10 0000000111001110000000 00000001 11111000 000000100000000000 0
Q ss_pred ccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHH
Q 015550 231 MQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE 309 (405)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~ 309 (405)
....+.... .....+..+.+.++++|+|+|+|++|.++| ...+++++.+ |+++++++++ ||++++|+|++
T Consensus 240 ~~~~~~~~~-------~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~i-p~~~~~~i~~~gH~~~~e~p~~ 310 (330)
T 3nwo_A 240 GPNEFHVVG-------TLGDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHI-PDVRSHVFPGTSHCTHLEKPEE 310 (330)
T ss_dssp CSCSSSCCS-------GGGGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHC-SSEEEEEETTCCTTHHHHSHHH
T ss_pred Cchhhhhhc-------cccCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhC-CCCcEEEeCCCCCchhhcCHHH
Confidence 000000000 000112345678899999999999999876 4677888876 9999999998 99999999999
Q ss_pred HHHHHHHHHHhhcC
Q 015550 310 VNQALIDLIKASEK 323 (405)
Q Consensus 310 v~~~i~~fl~~~~~ 323 (405)
+++.|.+||++...
T Consensus 311 ~~~~i~~FL~~~~~ 324 (330)
T 3nwo_A 311 FRAVVAQFLHQHDL 324 (330)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc
Confidence 99999999988653
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=255.43 Aligned_cols=241 Identities=24% Similarity=0.343 Sum_probs=172.0
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCC-CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGT-HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+++.+|.+++|...|+++++|||+||++++ ...|.++++.|.+ +||+|+++|+|||
T Consensus 5 ~~~~~~g~~l~~~~~g~~~~~vvllHG~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~ 62 (254)
T 2ocg_A 5 AKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNK----------------------KLFTVVAWDPRGY 62 (254)
T ss_dssp EEEEETTEEEEEEEEECCSEEEEEECCTTCCHHHHCHHHHHHSCT----------------------TTEEEEEECCTTS
T ss_pred eEEEECCEEEEEEEecCCCCeEEEECCCCCCCccchHHHHHHHhh----------------------CCCeEEEECCCCC
Confidence 3467799999999999887789999999988 6779999999987 4799999999999
Q ss_pred CCCCCCCCCCCCC---HHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 97 GRSSVPVKKTEYT---TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 97 G~S~~~~~~~~~~---~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
|.|+.+.. .++ +.+.++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++... ...
T Consensus 63 G~S~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-------~~~ 133 (254)
T 2ocg_A 63 GHSRPPDR--DFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAY-------VTD 133 (254)
T ss_dssp TTCCSSCC--CCCTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSB-------CCH
T ss_pred CCCCCCCC--CCChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccc-------cCh
Confidence 99986543 455 778899999999999999999999999999999999999999999999987531 111
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhH---HHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY---LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
.... ....... . ..+.... +....... ........+...+. ........
T Consensus 134 ~~~~-~~~~~~~--~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~ 185 (254)
T 2ocg_A 134 EDSM-IYEGIRD--V---------SKWSERTRKPLEALYGYD-YFARTCEKWVDGIR---------------QFKHLPDG 185 (254)
T ss_dssp HHHH-HHHTTSC--G---------GGSCHHHHHHHHHHHCHH-HHHHHHHHHHHHHH---------------GGGGSGGG
T ss_pred hhHH-HHHHHHH--H---------HHHHHHhHHHHHHHhcch-hhHHHHHHHHHHHH---------------HHHhccCC
Confidence 1100 0000000 0 0000000 00000000 00000111111000 00000000
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
....+.+.++++|+|+|+|++|.++|++.++.+++.+ ++++++++++ ||+++.|+|+++++.|.+||
T Consensus 186 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 186 NICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 253 (254)
T ss_dssp BSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred chhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhC-CCCEEEEcCCCCCchhhhCHHHHHHHHHHHh
Confidence 1123456788999999999999999999999999886 8999999998 99999999999999999998
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=257.56 Aligned_cols=284 Identities=17% Similarity=0.209 Sum_probs=190.5
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+..+++.+|.+++|...|++ |+|||+||++++...|.++++.|.. +||+|+++|+|
T Consensus 9 ~~~~~~~~~g~~l~~~~~g~~-~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~ 65 (309)
T 3u1t_A 9 FAKRTVEVEGATIAYVDEGSG-QPVLFLHGNPTSSYLWRNIIPYVVA----------------------AGYRAVAPDLI 65 (309)
T ss_dssp CCCEEEEETTEEEEEEEEECS-SEEEEECCTTCCGGGGTTTHHHHHH----------------------TTCEEEEECCT
T ss_pred ccceEEEECCeEEEEEEcCCC-CEEEEECCCcchhhhHHHHHHHHHh----------------------CCCEEEEEccC
Confidence 456778899999999999985 4799999999999999999999443 29999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch--
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD-- 172 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-- 172 (405)
|||.|+.+.. .++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........+...
T Consensus 66 G~G~S~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 143 (309)
T 3u1t_A 66 GMGDSAKPDI--EYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAM 143 (309)
T ss_dssp TSTTSCCCSS--CCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGG
T ss_pred CCCCCCCCCc--ccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCcccccccccc
Confidence 9999987664 789999999999999999999999999999999999999999999999999998754332111111
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH-------hh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA-------CW 245 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 245 (405)
....................... ...+...++................+...+...... ......... ..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 220 (309)
T 3u1t_A 144 GPQLGPLFRDLRTADVGEKMVLD-GNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSR--LPTLQWPREVPIGGEPAF 220 (309)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHTT-TCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGG--HHHHHHHHHSCBTTBSHH
T ss_pred chhhhHHHHHHhccchhhhhccc-cceehhhhcccccccccCCHHHHHHHHHhcCCcccc--chHHHHHHHhccccccch
Confidence 11111122222111111111000 011111111111001111111112222111110000 000000000 00
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
......+....+.++++|+|+|+|++|.++|++.++++.+.+ ++.+++++++ ||+++.++|+++++.|.+||++...+
T Consensus 221 ~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~ 299 (309)
T 3u1t_A 221 AEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENV-PNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPH 299 (309)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred hhhhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhC-CCCEEEEecCCcccchhhCHHHHHHHHHHHHHhcchh
Confidence 000111334557788999999999999999999999999987 8888888887 99999999999999999999998865
Q ss_pred CCC
Q 015550 325 ISP 327 (405)
Q Consensus 325 ~~~ 327 (405)
...
T Consensus 300 ~~~ 302 (309)
T 3u1t_A 300 ASL 302 (309)
T ss_dssp CC-
T ss_pred hhh
Confidence 543
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=260.64 Aligned_cols=262 Identities=19% Similarity=0.303 Sum_probs=177.8
Q ss_pred CcccccC--C--EEEEEEEccCCCCeEEEEecCC---CCCCchhhhH-hhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 17 DAALNDN--G--IKIFYRTYGRGPTKVILITGLA---GTHDAWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 17 ~~~~~~~--g--~~i~y~~~G~~~p~vvllHG~~---~~~~~~~~~~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
.++++++ | .+++|...|+++++|||+||++ ++...|..++ +.|.+ +|+|
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v 69 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEA-----------------------GYRV 69 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCSSEEEEECCCSTTCCHHHHTTTTHHHHHHT-----------------------TCEE
T ss_pred ceEEEEcCCCcEEEEEEeccCCCCceEEEECCCCcccchhHHHHHhhhHHHhc-----------------------CCeE
Confidence 4567777 9 9999999998765899999998 5566788888 88887 7999
Q ss_pred EEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+++|+||||.|+.+.. ..++.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 70 i~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 148 (289)
T 1u2e_A 70 ILLDCPGWGKSDSVVN-SGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLF 148 (289)
T ss_dssp EEECCTTSTTSCCCCC-SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS
T ss_pred EEEcCCCCCCCCCCCc-cccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccc
Confidence 9999999999987653 267899999999999999999999999999999999999999999999999999875322211
Q ss_pred ccchhHHHHHHHHHhhccChhhhhc----cCc-ccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAA----VDL-DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
......................... ... ......+..................+...+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 214 (289)
T 1u2e_A 149 TPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEAN-------------- 214 (289)
T ss_dssp SCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHC--------------
T ss_pred cccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhc--------------
Confidence 1111111111111111111100000 000 000001111100000000000000000000000
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
. ....+..+.+.++++|+|+|+|++|.++|++.++++++.+ ++++++++++ ||++++|+|+++++.|.+||++
T Consensus 215 -~--~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 215 -P--KQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGI-AGSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp -S--CCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHS-TTCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred -c--ccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhC-CCcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 0 0011123456788999999999999999999999999987 8999999998 9999999999999999999953
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=260.65 Aligned_cols=259 Identities=21% Similarity=0.310 Sum_probs=177.7
Q ss_pred CcccccCCEEEEEEEcc-CCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 17 DAALNDNGIKIFYRTYG-RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G-~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
.++++.+|.+++|...| +++|+|||+||++ ++...|.++++.|.+ +|+|+++|
T Consensus 9 ~~~~~~~g~~l~y~~~g~~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D 65 (285)
T 1c4x_A 9 EKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-----------------------NFFVVAPD 65 (285)
T ss_dssp EEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-----------------------TSEEEEEC
T ss_pred ceEEEECCEEEEEEecCCCCCCEEEEEeCCCCCCcchhhHHHHHHHHhh-----------------------CcEEEEec
Confidence 45678899999999999 6665699999997 666789999999987 79999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIM----AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~----~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+||||.|+.+.. ..++++++ ++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+......
T Consensus 66 ~~G~G~S~~~~~-~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 144 (285)
T 1c4x_A 66 LIGFGQSEYPET-YPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR 144 (285)
T ss_dssp CTTSTTSCCCSS-CCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC
T ss_pred CCCCCCCCCCCC-cccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCcc
Confidence 999999986553 26899999 9999999999999999999999999999999999999999999999875322111
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc-h--hHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-R--RAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
. .........+........ ...+........ . ................ ........+
T Consensus 145 ~----~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 204 (285)
T 1c4x_A 145 P----PELARLLAFYADPRLTPY----------RELIHSFVYDPENFPGMEEIVKSRFEVANDPE------VRRIQEVMF 204 (285)
T ss_dssp C----HHHHHHHTGGGSCCHHHH----------HHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHH------HHHHHHHHH
T ss_pred c----hhHHHHHHHhccccHHHH----------HHHHHHhhcCcccccCcHHHHHHHHHhccCHH------HHHHHHHHh
Confidence 0 111111111110000000 000111000000 0 0111111111000000 000000000
Q ss_pred --hccc---ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 246 --MHKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 246 --~~~~---~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.... .....+.+.++++|+|+|+|++|.++|++.++.+++.+ ++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 205 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 283 (285)
T 1c4x_A 205 ESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFR 283 (285)
T ss_dssp HHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhhccCCCCEEEEEeCCCeeeCHHHHHHHHHhC-CCceEEEeCCCCcchhhcCHHHHHHHHHHHHh
Confidence 0000 01123456788999999999999999999999999886 8999999998 999999999999999999997
Q ss_pred h
Q 015550 320 A 320 (405)
Q Consensus 320 ~ 320 (405)
+
T Consensus 284 ~ 284 (285)
T 1c4x_A 284 A 284 (285)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=260.08 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=170.0
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
.+.+|.+|+|..+|+++ +|||+||++++...|.++++.|.+ +||+|+++|+||||.|
T Consensus 4 ~~~~g~~l~y~~~g~g~-~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G~S 60 (274)
T 1a8q_A 4 TTRDGVEIFYKDWGQGR-PVVFIHGWPLNGDAWQDQLKAVVD----------------------AGYRGIAHDRRGHGHS 60 (274)
T ss_dssp ECTTSCEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTS
T ss_pred EccCCCEEEEEecCCCc-eEEEECCCcchHHHHHHHHHHHHh----------------------CCCeEEEEcCCCCCCC
Confidence 45589999999999664 699999999999999999999987 3899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCC---Cc-cchhH
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQC---CP-KLDLQ 174 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~---~~-~~~~~ 174 (405)
+.+. ..++++++++|+.+++++++.++++|+||||||.+++.+|.++ |++|+++|++++.++.... .+ .....
T Consensus 61 ~~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 138 (274)
T 1a8q_A 61 TPVW--DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDE 138 (274)
T ss_dssp CCCS--SCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHH
T ss_pred CCCC--CCCcHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHH
Confidence 8654 3689999999999999999999999999999999999988776 9999999999975432110 01 01111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCC----CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS----STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
................. ..+...+... ..........+....... ....... .......
T Consensus 139 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~ 201 (274)
T 1a8q_A 139 VFDALKNGVLTERSQFW----------KDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQ------TIEGGVR-CVDAFGY 201 (274)
T ss_dssp HHHHHHHHHHHHHHHHH----------HHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTS------CHHHHHH-HHHHHHH
T ss_pred HHHHHHHHhhccHHHHH----------HHhcccccccccccccccHHHHHHHHHHhhhc------ChHHHHH-HHhhhhc
Confidence 11111100000000000 0000000000 000011111111100000 0000000 0000001
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-Ccccccc--CHHHHHHHHHHHHH
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHE--RTEEVNQALIDLIK 319 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e--~p~~v~~~i~~fl~ 319 (405)
.+..+.+.++++|+|+|+|++|.++|++.. +.+.+. .++++++++++ ||+++.| +|+++++.|.+||+
T Consensus 202 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 202 TDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQI-IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp CCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHH-STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred CcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhh-CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 122355678899999999999999998844 445554 48999999998 9999999 99999999999985
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=259.25 Aligned_cols=262 Identities=21% Similarity=0.286 Sum_probs=169.7
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
.+.+|.+++|...|++ |+|||+||++++...|.++++.|.+ +||+|+++|+||||.|
T Consensus 4 ~~~~g~~l~y~~~g~~-~~vvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G~G~S 60 (273)
T 1a8s_A 4 TTRDGTQIYYKDWGSG-QPIVFSHGWPLNADSWESQMIFLAA----------------------QGYRVIAHDRRGHGRS 60 (273)
T ss_dssp ECTTSCEEEEEEESCS-SEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTS
T ss_pred ecCCCcEEEEEEcCCC-CEEEEECCCCCcHHHHhhHHhhHhh----------------------CCcEEEEECCCCCCCC
Confidence 4568999999999966 4699999999999999999999987 3899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCC---c-cchhH
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCC---P-KLDLQ 174 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~---~-~~~~~ 174 (405)
+.+.. .++++++++|+.+++++++.++++|+||||||.+|+.+|+++ |++|+++|++++..+..... + .....
T Consensus 61 ~~~~~--~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 138 (273)
T 1a8s_A 61 SQPWS--GNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPME 138 (273)
T ss_dssp CCCSS--CCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHH
T ss_pred CCCCC--CCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHH
Confidence 86543 689999999999999999999999999999999999988776 99999999999754321110 0 01111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
.........................+... .............+........ ...... ........+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~ 206 (273)
T 1a8s_A 139 VFDGIRQASLADRSQLYKDLASGPFFGFN-----QPGAKSSAGMVDWFWLQGMAAG------HKNAYD-CIKAFSETDFT 206 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSSTT-----STTCCCCHHHHHHHHHHHHHSC------HHHHHH-HHHHHHHCCCH
T ss_pred HHHHHHHHhHhhHHHHHHHhhcccccCcC-----CcccccCHHHHHHHHHhccccc------hhHHHH-HHHHHhccChh
Confidence 11110000000000000000000000000 0000000111111111000000 000000 00000001223
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHH-HHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~-~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+.+.++++|+|+|+|++|.++|++. .+.+.+. .++++++++++ ||+++.++|+++++.|.+||+
T Consensus 207 ~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 207 EDLKKIDVPTLVVHGDADQVVPIEASGIASAAL-VKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred hhhhcCCCCEEEEECCCCccCChHHHHHHHHHh-CCCcEEEEeCCCCCcchhhCHHHHHHHHHHHHh
Confidence 4567889999999999999999874 4455554 48999999998 999999999999999999996
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-34 Score=258.09 Aligned_cols=258 Identities=23% Similarity=0.293 Sum_probs=170.4
Q ss_pred cccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
.+.+|.+|+|..+|+ ..|+|||+||++++...|.++++.|.+ +||+|+++|+||||.
T Consensus 4 ~~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~l~~----------------------~g~~vi~~D~~G~G~ 61 (275)
T 1a88_A 4 TTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLS----------------------HGYRVIAHDRRGHGR 61 (275)
T ss_dssp ECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTT
T ss_pred EccCCCEEEEEEcCCCCCceEEEECCCCCchhhHHHHHHHHHH----------------------CCceEEEEcCCcCCC
Confidence 456899999999995 345799999999999999999999987 389999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCC---c-cchh
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCC---P-KLDL 173 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~---~-~~~~ 173 (405)
|+.+. ..++++++++|+.+++++++.++++++||||||.+++.+|+++ |++|+++|++++..+..... + ....
T Consensus 62 S~~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 139 (275)
T 1a88_A 62 SDQPS--TGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPL 139 (275)
T ss_dssp SCCCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCH
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCH
Confidence 98654 3689999999999999999999999999999999999988887 99999999999764321110 0 0111
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHH-hhhC----CCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE-EYVG----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
................... .... .+.. ...........+........ ...... .....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~ 202 (275)
T 1a88_A 140 EVFDEFRAALAANRAQFYI----------DVPSGPFYGFNREGATVSQGLIDHWWLQGMMGA------ANAHYE-CIAAF 202 (275)
T ss_dssp HHHHHHHHHHHHCHHHHHH----------HHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSC------HHHHHH-HHHHH
T ss_pred HHHHHHHHHHhhhHHHHHH----------hhhccccccccCcccccCHHHHHHHHHHhhhcc------hHhHHH-HHhhh
Confidence 1111111110000000000 0000 0000 00000111111111000000 000000 00000
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
...+..+.+.++++|+|+|+|++|.++|++.. +.+.+. .++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 203 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 203 SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAEL-LANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred hhcccccccccCCCCEEEEecCCCccCCcHHHHHHHHhh-CCCcEEEEcCCCCccHHHhCHHHHHHHHHHHhh
Confidence 01122345678899999999999999998744 445554 48999999998 999999999999999999996
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=257.99 Aligned_cols=264 Identities=19% Similarity=0.261 Sum_probs=173.1
Q ss_pred cccccCCEEEEEEEccCC--CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 18 AALNDNGIKIFYRTYGRG--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~--~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+.+.+|.+++|...|+. +|+|||+||++++...|.++++.|.+ +|+|+++|+||
T Consensus 9 ~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~G 65 (285)
T 3bwx_A 9 YWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAG-----------------------DWRVLCPEMRG 65 (285)
T ss_dssp EEECTTSCEEEEEEECBCTTSCCEEEECCTTCCGGGGHHHHHHHBB-----------------------TBCEEEECCTT
T ss_pred eeecCCCceEEEEEcCCCCCCCcEEEECCCCcchhhHHHHHHHhhc-----------------------CCEEEeecCCC
Confidence 346679999999999973 56799999999999999999999987 99999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
||.|+.+.....++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+ ......
T Consensus 66 ~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~-------~~~~~~ 138 (285)
T 3bwx_A 66 RGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGP-------EVSPEG 138 (285)
T ss_dssp BTTSCCCSSGGGCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS-------SCCHHH
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCc-------ccCcch
Confidence 9999866433468999999999999999999999999999999999999999999999999998642 111111
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCC--CchhHHHHHHHHh-hhhhc-cccCcccchhhhHHhhh----c
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS--STRRAILYQEYVK-GISAT-GMQSNYGFDGQIHACWM----H 247 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~----~ 247 (405)
......+....... ... ......+...... ..........+.. .+... .......+...+...+. .
T Consensus 139 ~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 3bwx_A 139 LERIRGYVGQGRNF----ETW--MHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGA 212 (285)
T ss_dssp HHHHHHHTTCCCEE----SSH--HHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTC
T ss_pred hHHHHHHhcCCccc----ccH--HHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhc
Confidence 11111111100000 000 0000011111000 0000011111111 11000 00000000000000000 0
Q ss_pred ccChhhhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 248 KMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 248 ~~~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
....+....+..+ ++|+|+|+|++|.+++++.++++++. ++++++++++ ||+++.|+|+.+ +.|.+||++
T Consensus 213 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 213 TPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp CCSSCCHHHHHHHTTSCEEEEEETTCSSSCHHHHHHHHTS--TTEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred cccchhhHHHHHccCCCeEEEEeCCCCccCHHHHHHHHhC--CCcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 0111222334445 79999999999999999999998885 8999999998 999999999987 579999964
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=258.05 Aligned_cols=255 Identities=11% Similarity=0.155 Sum_probs=172.3
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
.+++++|.+.|+++ +|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+
T Consensus 4 ~~~~~~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~ 59 (269)
T 2xmz_A 4 THYKFYEANVETNQ-VLVFLHGFLSDSRTYHNHIEKFTD-----------------------NYHVITIDLPGHGEDQSS 59 (269)
T ss_dssp CSEEEECCSSCCSE-EEEEECCTTCCGGGGTTTHHHHHT-----------------------TSEEEEECCTTSTTCCCC
T ss_pred ccceEEEEEcCCCC-eEEEEcCCCCcHHHHHHHHHHHhh-----------------------cCeEEEecCCCCCCCCCC
Confidence 57899999999886 599999999999999999999987 799999999999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH--HHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL--SIAI 180 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~ 180 (405)
... .++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... ......... ....
T Consensus 60 ~~~-~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~ 137 (269)
T 2xmz_A 60 MDE-TWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKE-EANQLERRLVDDARA 137 (269)
T ss_dssp TTS-CCCHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSS-HHHHHHHHHHHHHHH
T ss_pred CCC-ccCHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCC-chhHHHHhhhhhHHH
Confidence 532 689999999999999999999999999999999999999999999999999997532110 000000000 0000
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhhCCC--c----hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS--T----RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
..+..... ..++..+.... . ......+.+........ ...+...+... ......+..
T Consensus 138 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~ 200 (269)
T 2xmz_A 138 KVLDIAGI-------------ELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQS---PHKMAKALRDY-GTGQMPNLW 200 (269)
T ss_dssp HHHHHHCH-------------HHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSC---HHHHHHHHHHH-STTTSCCCG
T ss_pred HhhccccH-------------HHHHHHHHhCccccccccCCHHHHHHHHHHHhccC---cHHHHHHHHHH-HhccCccHH
Confidence 00000000 00000000000 0 00111111111000000 00000001000 001112223
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+.+.++++|+|+|+|++|.+++++..+ +.+.+ ++++++++++ ||+++.|+|+++++.|.+|+++..
T Consensus 201 ~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (269)
T 2xmz_A 201 PRLKEIKVPTLILAGEYDEKFVQIAKK-MANLI-PNSKCKLISATGHTIHVEDSDEFDTMILGFLKEEQ 267 (269)
T ss_dssp GGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHS-TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhC-CCcEEEEeCCCCCChhhcCHHHHHHHHHHHHHHhc
Confidence 567788999999999999999988765 77765 8999999998 999999999999999999998753
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=254.33 Aligned_cols=247 Identities=19% Similarity=0.274 Sum_probs=167.8
Q ss_pred EEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 26 KIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 26 ~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
+|+|.+.|+ ++|+|||+||++++...|.++++.|.+ .|+|+++|+||||.|+.
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~G~G~S~~ 58 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVN-----------------------DHNIIQVDVRNHGLSPR 58 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTT-----------------------TSCEEEECCTTSTTSCC
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHh-----------------------hCcEEEecCCCCCCCCC
Confidence 478999995 456799999999999999999999987 79999999999999986
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
+. .++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+..... +.. .........
T Consensus 59 ~~---~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~-~~~-~~~~~~~~~ 133 (255)
T 3bf7_A 59 EP---VMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV-RRH-DEIFAAINA 133 (255)
T ss_dssp CS---CCCHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCS-CCC-HHHHHHHHH
T ss_pred CC---CcCHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCc-ccH-HHHHHHHHh
Confidence 53 5789999999999999999999999999999999999999999999999999865322211 101 111111000
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccc-hhhhHHhhhcccChhhhhhhhhc
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF-DGQIHACWMHKMTQKDIQTIRSA 260 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i 260 (405)
..... ..........+............+...+.... +.. ...+...+.... ....+.++
T Consensus 134 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~l~~i 194 (255)
T 3bf7_A 134 VSESD------------AQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGE----WRFNVPVLWDQYPHIV---GWEKIPAW 194 (255)
T ss_dssp HHHSC------------CCSHHHHHHHHTTTCCCHHHHHHHHTTEETTE----ESSCHHHHHHTHHHHH---CCCCCCCC
T ss_pred ccccc------------cccHHHHHHHHhhhcchhHHHHHHHHhccCCc----eeecHHHHHhhhhhcc---cccccccc
Confidence 00000 00001111111100001111111111110000 000 000000000000 00225678
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
++|+|+|+|++|.+++++.++.+.+.+ ++++++++++ ||+++.|+|+++++.|.+|+++
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 195 DHPALFIPGGNSPYVSEQYRDDLLAQF-PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp CSCEEEECBTTCSTTCGGGHHHHHHHC-TTEEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHC-CCCeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 999999999999999999999998876 8999999998 9999999999999999999975
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=256.57 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=174.0
Q ss_pred ccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
+.+|.+++|...|+++ +|||+||++++...|.++++.|.+ +||+|+++|+||||.|+
T Consensus 9 ~~~g~~l~y~~~g~~~-pvvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G~G~S~ 65 (279)
T 1hkh_A 9 NSTPIELYYEDQGSGQ-PVVLIHGYPLDGHSWERQTRELLA----------------------QGYRVITYDRRGFGGSS 65 (279)
T ss_dssp TTEEEEEEEEEESSSE-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTEEEEEECCTTSTTSC
T ss_pred CCCCeEEEEEecCCCC-cEEEEcCCCchhhHHhhhHHHHHh----------------------CCcEEEEeCCCCCCCCC
Confidence 5689999999999765 599999999999999999999987 38999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCCC---cc-chhHH
Q 015550 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCC---PK-LDLQT 175 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~---~~-~~~~~ 175 (405)
.+. ..++++++++|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++..+..... +. .....
T Consensus 66 ~~~--~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 1hkh_A 66 KVN--TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEV 143 (279)
T ss_dssp CCS--SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHH
T ss_pred CCC--CCCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHH
Confidence 765 378999999999999999999999999999999999999999999 999999999854321110 00 00111
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhC-----CCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG-----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
................ ..+...++. ...........+.......... ........ + .
T Consensus 144 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~----~ 205 (279)
T 1hkh_A 144 FDGIEAAAKGDRFAWF----------TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPV---AAYAVVPA-W----I 205 (279)
T ss_dssp HHHHHHHHHHCHHHHH----------HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTT---HHHHTHHH-H----T
T ss_pred HHHHHHHhhhhhhhhH----------HHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHH---HHHHHHHH-H----h
Confidence 1111111100000000 000000000 0001111111111111111000 00001111 1 1
Q ss_pred hhhhhhhhhc---CCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 251 QKDIQTIRSA---GFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 251 ~~~~~~l~~i---~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.+..+.+.++ ++|+|+|+|++|.++|++.+ +.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 206 ~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 206 EDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEVEGAPHGLLWTHADEVNAALKTFLA 278 (279)
T ss_dssp CBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred hchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhC-CCeeEEEeCCCCccchhcCHHHHHHHHHHHhh
Confidence 1223345566 89999999999999998877 8888876 8999999998 999999999999999999996
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-33 Score=253.44 Aligned_cols=252 Identities=16% Similarity=0.220 Sum_probs=170.4
Q ss_pred EEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC--C
Q 015550 28 FYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK--K 105 (405)
Q Consensus 28 ~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~--~ 105 (405)
+|...|+++|+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+.. .
T Consensus 12 ~~~~~G~g~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~~~~~~ 68 (271)
T 1wom_A 12 HVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEE-----------------------DHRVILFDYVGSGHSDLRAYDLN 68 (271)
T ss_dssp TCEEEECCSSEEEEECCTTCCGGGGTTTGGGGTT-----------------------TSEEEECCCSCCSSSCCTTCCTT
T ss_pred eeEeecCCCCcEEEEcCCCCchhhHHHHHHHHHh-----------------------cCeEEEECCCCCCCCCCCccccc
Confidence 4566788878899999999999999999999987 89999999999999986531 1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC----ccchhHHHHHHHH
Q 015550 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC----PKLDLQTLSIAIR 181 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~ 181 (405)
..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+...... .............
T Consensus 69 ~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (271)
T 1wom_A 69 RYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLE 148 (271)
T ss_dssp GGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHH
Confidence 246899999999999999999999999999999999999999999999999999863211110 0011111111111
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcC
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (405)
.+........ ..+........ ......+.+...+...... ............+....+.+++
T Consensus 149 ~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~i~ 210 (271)
T 1wom_A 149 MMEKNYIGWA----------TVFAATVLNQP-DRPEIKEELESRFCSTDPV-------IARQFAKAAFFSDHREDLSKVT 210 (271)
T ss_dssp HHHHCHHHHH----------HHHHHHHHCCT-TCHHHHHHHHHHHHHSCHH-------HHHHHHHHHHSCCCHHHHTTCC
T ss_pred HHhhhHHHHH----------HHHHHHHhcCC-CchHHHHHHHHHHhcCCcH-------HHHHHHHHHhCcchHHhccccC
Confidence 1100000000 00000011100 0111111121111110000 0000000001112334567889
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.|+|+++++.|.+|+++.
T Consensus 211 ~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 211 VPSLILQCADDIIAPATVGKYMHQHL-PYSSLKQMEARGHCPHMSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp SCEEEEEEETCSSSCHHHHHHHHHHS-SSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHC-CCCEEEEeCCCCcCccccCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999876 8999999998 99999999999999999999864
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=256.40 Aligned_cols=263 Identities=23% Similarity=0.329 Sum_probs=174.8
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhH-hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+++.+|.+++|.+.|+ +.|+|||+||++++...|.+++ +.|.+ +||+|+++|+||
T Consensus 4 ~~~~~~g~~l~y~~~G~~~~~~vvllHG~~~~~~~w~~~~~~~L~~----------------------~G~~vi~~D~rG 61 (298)
T 1q0r_A 4 RIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLAD----------------------GGLHVIRYDHRD 61 (298)
T ss_dssp EEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHT----------------------TTCEEEEECCTT
T ss_pred ceeccCCeEEEEEeccCCCCCeEEEEcCCCCCccchHHHHHHHHHh----------------------CCCEEEeeCCCC
Confidence 34678999999999995 4567999999999999998754 88987 389999999999
Q ss_pred CCCCCCCC-CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC--------
Q 015550 96 MGRSSVPV-KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ-------- 166 (405)
Q Consensus 96 ~G~S~~~~-~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-------- 166 (405)
||.|+... ....++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+....
T Consensus 62 ~G~S~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 141 (298)
T 1q0r_A 62 TGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERV 141 (298)
T ss_dssp STTSCCCCTTTSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCcCCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhh
Confidence 99998621 224689999999999999999999999999999999999999999999999999998652110
Q ss_pred --------CCccchhHHHHHHHHHhh-ccChhhhhccCcccccCHhHH---HhhhC-CCchhHHHHHHHHh-hhhhcccc
Q 015550 167 --------CCPKLDLQTLSIAIRFFR-AKTPEKRAAVDLDTHYSQEYL---EEYVG-SSTRRAILYQEYVK-GISATGMQ 232 (405)
Q Consensus 167 --------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~-~~~~~~~~ 232 (405)
..+......+........ ...... +...+. ..... ...........+.. .+.....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 211 (298)
T 1q0r_A 142 MRGEPTLDGLPGPQQPFLDALALMNQPAEGRAA---------EVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGG- 211 (298)
T ss_dssp HHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHH---------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTT-
T ss_pred hhhhhhhcccccccHHHHHHHhccCcccccHHH---------HHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCC-
Confidence 001100111110000000 000000 000000 00000 00011111111111 1111100
Q ss_pred Ccccc-hhhhHHhhhcccChhhhhh-hhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHH
Q 015550 233 SNYGF-DGQIHACWMHKMTQKDIQT-IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE 309 (405)
Q Consensus 233 ~~~~~-~~~~~~~~~~~~~~~~~~~-l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~ 309 (405)
...+ ...+. .....+..+. ++++++|+|+|+|++|.++|++.++.+++.+ ++++++++++ || +.|++
T Consensus 212 -~~~~~~~~~~----~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH----e~p~~ 281 (298)
T 1q0r_A 212 -VLAEPYAHYS----LTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGH----ALPSS 281 (298)
T ss_dssp -CCSCCCGGGG----CCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCS----SCCGG
T ss_pred -ccchhhhhhh----hhcCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhC-CCCEEEEcCCCCC----CCcHH
Confidence 0011 11110 0011233455 7889999999999999999999999999876 9999999998 99 78999
Q ss_pred HHHHHHHHHHhhc
Q 015550 310 VNQALIDLIKASE 322 (405)
Q Consensus 310 v~~~i~~fl~~~~ 322 (405)
+++.|.+||.+..
T Consensus 282 ~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 282 VHGPLAEVILAHT 294 (298)
T ss_dssp GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=262.80 Aligned_cols=269 Identities=14% Similarity=0.196 Sum_probs=176.0
Q ss_pred cccccCCEEEEEEEccCCC-CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~-p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
++++.+|.+++|...|+++ |+|||+||++++...|.++++.|.+ .|+|+++|+|||
T Consensus 24 ~~~~~~g~~l~y~~~G~g~~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~Dl~Gh 80 (318)
T 2psd_A 24 KQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEP-----------------------VARCIIPDLIGM 80 (318)
T ss_dssp EEEEETTEEEEEEECCSCTTSEEEEECCTTCCGGGGTTTGGGTTT-----------------------TSEEEEECCTTS
T ss_pred eEEeeCCeEEEEEEcCCCCCCeEEEECCCCCcHHHHHHHHHHhhh-----------------------cCeEEEEeCCCC
Confidence 4678899999999999864 5799999999999999999999987 789999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC---CCCccch
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF---QCCPKLD 172 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~---~~~~~~~ 172 (405)
|.|+.+.. ..++++++++|+.++++++++ ++++|+||||||.+|+.+|.++|++|+++|++++..... ...+...
T Consensus 81 G~S~~~~~-~~~~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~ 159 (318)
T 2psd_A 81 GKSGKSGN-GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIE 159 (318)
T ss_dssp TTCCCCTT-SCCSHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCH
T ss_pred CCCCCCCC-CccCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHH
Confidence 99987632 358999999999999999999 899999999999999999999999999999998643221 1111111
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccC--------cccchh-hhHH
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQS--------NYGFDG-QIHA 243 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~ 243 (405)
.. ...+... ........ ...+....+....... ........+...+...+... ...... ....
T Consensus 160 -~~----~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
T 2psd_A 160 -ED----IALIKSE-EGEKMVLE-NNFFVETVLPSKIMRK-LEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPD 231 (318)
T ss_dssp -HH----HHHHHST-HHHHHHTT-TCHHHHTHHHHTCSSC-CCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHH
T ss_pred -HH----HHHHhcc-cchhhhhc-chHHHHhhcccccccc-CCHHHHHHHHHhhcCccccccchhcccccccccccccch
Confidence 11 1111100 00000000 0000000011000000 00111112221111000000 000000 0000
Q ss_pred hhhcccChhhhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhc
Q 015550 244 CWMHKMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
.. ....+..+.+..+ ++|+|+|+|++| ++++ .++++.+.+ ++++++++++||++++|+|+++++.|.+||++..
T Consensus 232 ~~--~~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~-~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~ 306 (318)
T 2psd_A 232 VV--QIVRNYNAYLRASDDLPKLFIESDPG-FFSN-AIVEGAKKF-PNTEFVKVKGLHFLQEDAPDEMGKYIKSFVERVL 306 (318)
T ss_dssp HH--HHHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTS-SSEEEEEEEESSSGGGTCHHHHHHHHHHHHHHHH
T ss_pred hH--HHHHHHHHHhccccCCCeEEEEeccc-cCcH-HHHHHHHhC-CCcEEEEecCCCCCHhhCHHHHHHHHHHHHHHhh
Confidence 00 0001223445677 999999999999 8888 888888876 8899988855999999999999999999998765
Q ss_pred C
Q 015550 323 K 323 (405)
Q Consensus 323 ~ 323 (405)
.
T Consensus 307 ~ 307 (318)
T 2psd_A 307 K 307 (318)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=253.39 Aligned_cols=265 Identities=15% Similarity=0.165 Sum_probs=181.7
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..++++++|.+++|...|+++ +|||+||++++...|..+++.|.+ ||+|+++|+||
T Consensus 4 ~~~~~~~~~~~~~y~~~g~~~-~vv~~HG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~d~~G 59 (278)
T 3oos_A 4 TTNIIKTPRGKFEYFLKGEGP-PLCVTHLYSEYNDNGNTFANPFTD-----------------------HYSVYLVNLKG 59 (278)
T ss_dssp EEEEEEETTEEEEEEEECSSS-EEEECCSSEECCTTCCTTTGGGGG-----------------------TSEEEEECCTT
T ss_pred ccCcEecCCceEEEEecCCCC-eEEEEcCCCcchHHHHHHHHHhhc-----------------------CceEEEEcCCC
Confidence 345688899999999999665 699999999999999999999987 99999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC-C-------
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ-C------- 167 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~------- 167 (405)
||.|+.+.....++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++...... .
T Consensus 60 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 139 (278)
T 3oos_A 60 CGNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYC 139 (278)
T ss_dssp STTSCCCSSGGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTS
T ss_pred CCCCCCCCCcccCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhh
Confidence 99998776445789999999999999999999999999999999999999999999999999998753100 0
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh-h
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-M 246 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (405)
...............+......... ..................+..+.. .... .......+..+. .
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~ 206 (278)
T 3oos_A 140 SKNVKFNRIVSIMNALNDDSTVQEE--------RKALSREWALMSFYSEEKLEEALK---LPNS--GKTVGNRLNYFRQV 206 (278)
T ss_dssp TTSTTHHHHHHHHHHHTCTTSCHHH--------HHHHHHHHHHHHCSCHHHHHHHTT---SCCC--CEECHHHHHHHHHT
T ss_pred hhchhHHHHHHHHHhhcccccCchH--------HHHHHHHHhhcccCCcHHHHHHhh---cccc--chhHHHHHHHhhhc
Confidence 0000111111111111110000000 000000000000000111111111 1000 000111111111 0
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.....+....+.++++|+++|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.++|+++++.|.+||
T Consensus 207 ~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 207 EYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLI-PNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp TGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred ccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhC-CCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 11122334567788999999999999999999999999987 8999999998 99999999999999999885
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-34 Score=260.64 Aligned_cols=278 Identities=16% Similarity=0.230 Sum_probs=179.5
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+.++++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ .|+|+++|+||
T Consensus 11 ~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~G 66 (301)
T 3kda_A 11 ESAYREVDGVKLHYVKGGQG-PLVMLVHGFGQTWYEWHQLMPELAK-----------------------RFTVIAPDLPG 66 (301)
T ss_dssp EEEEEEETTEEEEEEEEESS-SEEEEECCTTCCGGGGTTTHHHHTT-----------------------TSEEEEECCTT
T ss_pred ceEEEeeCCeEEEEEEcCCC-CEEEEECCCCcchhHHHHHHHHHHh-----------------------cCeEEEEcCCC
Confidence 45678899999999999955 5799999999999999999999998 69999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch--
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD-- 172 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-- 172 (405)
||.|+.+. ..++++++++|+.+++++++.++ ++++||||||.+|+.+|.++|++|+++|++++...+........
T Consensus 67 ~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 144 (301)
T 3kda_A 67 LGQSEPPK--TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFT 144 (301)
T ss_dssp STTCCCCS--SCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEE
T ss_pred CCCCCCCC--CCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhc
Confidence 99998774 48899999999999999999988 99999999999999999999999999999998753322111000
Q ss_pred h--HHHHHHHHHhhc-cChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhcc-ccCcccchhhhHHhhhc
Q 015550 173 L--QTLSIAIRFFRA-KTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATG-MQSNYGFDGQIHACWMH 247 (405)
Q Consensus 173 ~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 247 (405)
. ........+... ..............+...+........ .........+...+.... ......+........
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (301)
T 3kda_A 145 AQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESV-- 222 (301)
T ss_dssp TTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHH--
T ss_pred chhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccch--
Confidence 0 000000000000 000000000000000011111111110 001111112221111100 000000000000000
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
.........+..+++|+|+|+|++| +++...+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+++..+.
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 223 RQNAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYA-EDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGRHH 297 (301)
T ss_dssp HHHHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTB-SSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSCCC
T ss_pred hhcccchhhccccCcceEEEecCCC--CChhHHHHHHhhc-ccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCchh
Confidence 0001112223478999999999999 6778888888865 9999999998 99999999999999999999886643
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=260.18 Aligned_cols=281 Identities=20% Similarity=0.244 Sum_probs=173.2
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
-..++++.+|.+++|...|++ |+|||+||++++...|.++++.|.+ ||+|+++|+|
T Consensus 13 ~~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~D~~ 68 (306)
T 3r40_A 13 FGSEWINTSSGRIFARVGGDG-PPLLLLHGFPQTHVMWHRVAPKLAE-----------------------RFKVIVADLP 68 (306)
T ss_dssp CEEEEECCTTCCEEEEEEECS-SEEEEECCTTCCGGGGGGTHHHHHT-----------------------TSEEEEECCT
T ss_pred CceEEEEeCCEEEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHhcc-----------------------CCeEEEeCCC
Confidence 345678899999999999965 5799999999999999999999997 9999999999
Q ss_pred CCCCCCCCCCC---CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 95 GMGRSSVPVKK---TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 95 G~G~S~~~~~~---~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
|||.|+.+... ..++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.+.... ....
T Consensus 69 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~ 147 (306)
T 3r40_A 69 GYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEY-WQRM 147 (306)
T ss_dssp TSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHH-HHHC
T ss_pred CCCCCCCCCCCcccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccc-hhhh
Confidence 99999877642 1589999999999999999999999999999999999999999999999999997531000 0000
Q ss_pred hhHHHHHHH--HHhhccC-hhhhhccCcccccCHhHHHhhhC---CCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 172 DLQTLSIAI--RFFRAKT-PEKRAAVDLDTHYSQEYLEEYVG---SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 172 ~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
......... ....... ............+...++..... .........+.+...+...... ...........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 225 (306)
T 3r40_A 148 NRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRR--HVMCEDYRAGA 225 (306)
T ss_dssp SHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHH--HHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCc--chhhHHHHhcc
Confidence 000000000 0000000 00000000000011111111111 1111122222222221110000 00000000000
Q ss_pred hccc--ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhc
Q 015550 246 MHKM--TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 246 ~~~~--~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
.... .......+..+++|+|+|+|++|.+++.....+..+.+.++++++++++||+++.++|+++++.|.+||++..
T Consensus 226 ~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 226 YADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPIESGHFLPEEAPDQTAEALVRFFSAAP 304 (306)
T ss_dssp THHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEESSCSCHHHHSHHHHHHHHHHHHHC--
T ss_pred cccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEecCCcCchhhChHHHHHHHHHHHHhcc
Confidence 0000 0111124678999999999999999994444444444558999999966999999999999999999998753
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=249.33 Aligned_cols=264 Identities=18% Similarity=0.220 Sum_probs=170.1
Q ss_pred CcccccCCEEEEEEEccCC--CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 17 DAALNDNGIKIFYRTYGRG--PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~--~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..+++.+|.+++|...|++ +++|||+||++++...|...+..+.+ +||+|+++|+|
T Consensus 7 ~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~ 64 (293)
T 1mtz_A 7 ENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK----------------------EGITVLFYDQF 64 (293)
T ss_dssp EEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGG----------------------GTEEEEEECCT
T ss_pred ceEEEECCEEEEEEEECCCCCCCeEEEEeCCCCcchhHHHHHHHHHh----------------------cCcEEEEecCC
Confidence 4567889999999999975 26899999987766555444455544 38999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
|||.|+.+. ...++++++++|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++... ...
T Consensus 65 G~G~S~~~~-~~~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~-------~~~ 136 (293)
T 1mtz_A 65 GCGRSEEPD-QSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS-------VPL 136 (293)
T ss_dssp TSTTSCCCC-GGGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB-------HHH
T ss_pred CCccCCCCC-CCcccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccC-------hHH
Confidence 999998765 23589999999999999999 999999999999999999999999999999999998631 110
Q ss_pred HHHHHHHHHhhccChhhhhcc---C-cccccCH-------hHHHhhhCC-CchhHHHHHHHHhh-----hhhccccCccc
Q 015550 174 QTLSIAIRFFRAKTPEKRAAV---D-LDTHYSQ-------EYLEEYVGS-STRRAILYQEYVKG-----ISATGMQSNYG 236 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (405)
. ................... . ....... .+....... ..........+... +........+.
T Consensus 137 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (293)
T 1mtz_A 137 T-VKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFT 215 (293)
T ss_dssp H-HHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTB
T ss_pred H-HHHHHHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceec
Confidence 0 0000001100000000000 0 0000000 011111100 00001110100000 00000000000
Q ss_pred chhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHH
Q 015550 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
.. ......+..+.+.++++|+|+|+|++| .+++..++++++.+ ++++++++++ ||+++.|+|+++++.|.
T Consensus 216 ~~-------~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 286 (293)
T 1mtz_A 216 IT-------GTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLS 286 (293)
T ss_dssp CC-------STTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred cc-------ccccCCChhhhhccCCCCEEEEeeCCC-CCCHHHHHHHHHhC-CCceEEEeCCCCCCccccCHHHHHHHHH
Confidence 00 000011223556788999999999999 67888889999876 8999999998 99999999999999999
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
+|+++
T Consensus 287 ~fl~~ 291 (293)
T 1mtz_A 287 DFILK 291 (293)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99975
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=247.86 Aligned_cols=254 Identities=15% Similarity=0.150 Sum_probs=174.5
Q ss_pred cccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
++++|.+++|...|+ ++|+|||+||++++...|.++++.|.+ +|+|+++|+||||.
T Consensus 4 ~~~~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~D~~G~G~ 60 (264)
T 3ibt_A 4 LNVNGTLMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLAR-----------------------DFHVICPDWRGHDA 60 (264)
T ss_dssp CEETTEECCEEEESCSSSCEEEEECCTTCCGGGGTTHHHHHTT-----------------------TSEEEEECCTTCST
T ss_pred EeeCCeEEEEEEeCCCCCCeEEEEcCCCCcHhHHHHHHHHHHh-----------------------cCcEEEEccccCCC
Confidence 556799999999998 567899999999999999999999987 89999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEeccCCCCCCCCccchhHHHH
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (405)
|+.+. ..++++++++|+.+++++++.++++++||||||.+|+.+|.++ |++|+++|++++.. .. ......
T Consensus 61 S~~~~--~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~---~~----~~~~~~ 131 (264)
T 3ibt_A 61 KQTDS--GDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL---QP----HPGFWQ 131 (264)
T ss_dssp TCCCC--SCCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS---SC----CHHHHH
T ss_pred CCCCc--cccCHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC---Cc----Chhhcc
Confidence 98774 4789999999999999999999999999999999999999999 99999999999875 11 111111
Q ss_pred HHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc-Chhhhhh
Q 015550 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM-TQKDIQT 256 (405)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 256 (405)
. ........... .........++... ......+.+...+...... .+............ ..+..+.
T Consensus 132 ~-~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 198 (264)
T 3ibt_A 132 Q-LAEGQHPTEYV--------AGRQSFFDEWAETT-DNADVLNHLRNEMPWFHGE---MWQRACREIEANYRTWGSPLDR 198 (264)
T ss_dssp H-HHHTTCTTTHH--------HHHHHHHHHHHTTC-CCHHHHHHHHHTGGGSCHH---HHHHHHHHHHHHHHHHSSHHHH
T ss_pred h-hhcccChhhHH--------HHHHHHHHHhcccC-CcHHHHHHHHHhhhhccch---hHHHHHHHhccchhhccchhhc
Confidence 1 11111000000 00011111111111 1112222222222111100 00000000000000 0112366
Q ss_pred hhhcCCcEEEEee--cCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 257 IRSAGFLVSVIHG--RHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 257 l~~i~~Pvlvi~G--~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+.++++|+++|+| +.|...+++..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 199 l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 199 MDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGH-SWFHPRHIPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHC-TTEEEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred ccccCCCeEEEEecCCccchhhHHHHHHHHHhC-CCceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 7889999999976 444455567778888876 8999999998 999999999999999999985
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=253.31 Aligned_cols=278 Identities=16% Similarity=0.183 Sum_probs=188.6
Q ss_pred CCCcccccCCEEEEEEEccCC-CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 15 APDAALNDNGIKIFYRTYGRG-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~-~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
...++++.+|.+++|...|+. .|+|||+||++++...|..+++.|.+ ||+|+++|+
T Consensus 10 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~ 66 (299)
T 3g9x_A 10 FDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-----------------------SHRCIAPDL 66 (299)
T ss_dssp CCCEEEEETTEEEEEEEESCSSSCCEEEECCTTCCGGGGTTTHHHHTT-----------------------TSCEEEECC
T ss_pred cceeeeeeCCeEEEEEecCCCCCCEEEEECCCCccHHHHHHHHHHHcc-----------------------CCEEEeeCC
Confidence 456778999999999999973 56799999999999999999999976 999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
||||.|+.+.. .++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++..... .......
T Consensus 67 ~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~ 143 (299)
T 3g9x_A 67 IGMGKSDKPDL--DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFP-TWDEWPE 143 (299)
T ss_dssp TTSTTSCCCCC--CCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBS-SGGGSCG
T ss_pred CCCCCCCCCCC--cccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchh-hhhhcch
Confidence 99999987765 78999999999999999999999999999999999999999999999999999553221 1111111
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHh-------hh
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC-------WM 246 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 246 (405)
. .......+............ ...+............ ........+...+....... ......... ..
T Consensus 144 ~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 218 (299)
T 3g9x_A 144 F-ARETFQAFRTADVGRELIID-QNAFIEGALPKCVVRP-LTEVEMDHYREPFLKPVDRE--PLWRFPNELPIAGEPANI 218 (299)
T ss_dssp G-GHHHHHHHTSSSHHHHHHTT-SCHHHHTHHHHTCSSC-CCHHHHHHHHGGGSSGGGGH--HHHHHHHHSCBTTBSHHH
T ss_pred H-HHHHHHHHcCCCcchhhhcc-chhhHHHhhhhhhccC-CCHHHHHHHHHHhccccccc--hhhhhhhhhhhccccchh
Confidence 1 11111112211111111000 0001111111111111 11111122222111110000 000000000 00
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
.....+....+..+++|+++|+|++|.++|++.++.+.+.+ ++++++++++ ||++++++|+++++.|.+++.....+
T Consensus 219 ~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 219 VALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHHH 296 (299)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGCCC
T ss_pred hhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhC-CCCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhhhc
Confidence 00112334557888999999999999999999999999987 8999999997 99999999999999999999887653
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=259.68 Aligned_cols=272 Identities=22% Similarity=0.319 Sum_probs=174.2
Q ss_pred CCCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 14 AAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 14 ~~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.....+++.+|.+++|...|++ |+|||+||++++...|.++++.|.+ +||+|+++|+
T Consensus 10 ~~~~~~~~~~g~~l~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~via~Dl 66 (328)
T 2cjp_A 10 KIEHKMVAVNGLNMHLAELGEG-PTILFIHGFPELWYSWRHQMVYLAE----------------------RGYRAVAPDL 66 (328)
T ss_dssp CCEEEEEEETTEEEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHT----------------------TTCEEEEECC
T ss_pred hhheeEecCCCcEEEEEEcCCC-CEEEEECCCCCchHHHHHHHHHHHH----------------------CCcEEEEECC
Confidence 3445668889999999999965 5799999999999999999999986 3899999999
Q ss_pred CCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC-C
Q 015550 94 RGMGRSSVP--VKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC-C 168 (405)
Q Consensus 94 ~G~G~S~~~--~~~~~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~ 168 (405)
||||.|+.+ .....++++++++|+.+++++++ .++++|+||||||++|+.+|.++|++|+++|+++++...... .
T Consensus 67 ~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~ 146 (328)
T 2cjp_A 67 RGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKM 146 (328)
T ss_dssp TTSTTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSC
T ss_pred CCCCCCCCcCcCCcccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccC
Confidence 999999876 33346899999999999999999 999999999999999999999999999999999965321110 0
Q ss_pred ccchhHHHHHH------HHHhhccChhhhhccCcccccCHhHHHhhh-----------------CC--------CchhHH
Q 015550 169 PKLDLQTLSIA------IRFFRAKTPEKRAAVDLDTHYSQEYLEEYV-----------------GS--------STRRAI 217 (405)
Q Consensus 169 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~--------~~~~~~ 217 (405)
.. ....... ...+........... .......+..++ .. ......
T Consensus 147 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (328)
T 2cjp_A 147 NV--VEGLKAIYGEDHYISRFQVPGEIEAEFA---PIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEE 221 (328)
T ss_dssp CH--HHHHHHHHCTTBHHHHTSSTTHHHHHHH---HHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHH
T ss_pred Ch--HHHHHhhcccchHHHhhhCCCcHHHHhh---ccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHH
Confidence 00 0000000 000000000000000 000000000000 00 000011
Q ss_pred HHHHHHhhhhhccccCcccchhhhHHhhhcccChhh--hhhhhhcCCcEEEEeecCCccCCHH----H--HHHHHHHhCC
Q 015550 218 LYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD--IQTIRSAGFLVSVIHGRHDVIAQIC----Y--ARRLAEKLYP 289 (405)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~i~~Pvlvi~G~~D~~~~~~----~--~~~l~~~l~~ 289 (405)
....+...+...+ +......+......... ...+..+++|+|+|+|++|.++|+. . ++.+.+.+ +
T Consensus 222 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-p 294 (328)
T 2cjp_A 222 ELDYYANKFEQTG------FTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDV-P 294 (328)
T ss_dssp HHHHHHHHHHHHC------SHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHS-T
T ss_pred HHHHHHHHhcccC------CcchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHh-c
Confidence 1111111111111 00000000000000000 0135678999999999999999863 2 24666655 8
Q ss_pred Ce-EEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 290 VA-RMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 290 ~~-~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
++ +++++++ ||++++|+|+++++.|.+||++
T Consensus 295 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 295 LLEEVVVLEGAAHFVSQERPHEISKHIYDFIQK 327 (328)
T ss_dssp TBCCCEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred CCeeEEEcCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 88 8999998 9999999999999999999963
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=255.28 Aligned_cols=260 Identities=18% Similarity=0.253 Sum_probs=175.0
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.++++.+|.+++|...|++ ++|||+||++ ++...|..+++.|.+ +|+|+++|+
T Consensus 18 ~~~~~~~g~~l~y~~~g~g-~~vvllHG~~~~~~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl 73 (296)
T 1j1i_A 18 ERFVNAGGVETRYLEAGKG-QPVILIHGGGAGAESEGNWRNVIPILAR-----------------------HYRVIAMDM 73 (296)
T ss_dssp EEEEEETTEEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHTT-----------------------TSEEEEECC
T ss_pred ceEEEECCEEEEEEecCCC-CeEEEECCCCCCcchHHHHHHHHHHHhh-----------------------cCEEEEECC
Confidence 4557889999999999976 4699999998 666789999999987 799999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
||||.|+ +.. ..++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.+......+.
T Consensus 74 ~G~G~S~-~~~-~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~-- 149 (296)
T 1j1i_A 74 LGFGKTA-KPD-IEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED-- 149 (296)
T ss_dssp TTSTTSC-CCS-SCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCCCC-CCC-CCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCch--
Confidence 9999998 432 368999999999999999998 89999999999999999999999999999999987532211100
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
....... ...... ....+....... ................... ...+...+..........
T Consensus 150 ---~~~~~~~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 212 (296)
T 1j1i_A 150 ---LRPIINY--DFTREG----------MVHLVKALTNDGFKIDDAMINSRYTYATDEAT--RKAYVATMQWIREQGGLF 212 (296)
T ss_dssp ---------C--CSCHHH----------HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHH--HHHHHHHHHHHHHHTSSB
T ss_pred ---HHHHhcc--cCCchH----------HHHHHHHhccCcccccHHHHHHHHHHhhCcch--hhHHHHHHHHHHhccccc
Confidence 0000000 000000 000000000000 0000000000000000000 000000000000000011
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
...+.+..+++|+|+|+|++|.++|++.++++.+.+ ++++++++++ ||+++.|+|+++++.|.+||++..
T Consensus 213 ~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 213 YDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV 283 (296)
T ss_dssp CCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred ccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHC-CCCEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence 123456788999999999999999999999999986 8999999998 999999999999999999998765
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=243.23 Aligned_cols=255 Identities=21% Similarity=0.247 Sum_probs=177.0
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.++++.+|.+++|...|+++ +|||+||++++...|..+++.|.. ||+|+++|+|||
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~-~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~d~~G~ 60 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSGSGP-PVVLVGGALSTRAGGAPLAERLAP-----------------------HFTVICYDRRGR 60 (262)
T ss_dssp CEEECTTSCEEEEEEEECSS-EEEEECCTTCCGGGGHHHHHHHTT-----------------------TSEEEEECCTTS
T ss_pred heEEcCCCcEEEEEEcCCCC-cEEEECCCCcChHHHHHHHHHHhc-----------------------CcEEEEEecCCC
Confidence 34577799999999999854 699999999999999999999986 999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
|.|+.+. .++++++++|+.+++++++ ++++++||||||.+++.+|.++| +|+++|++++........+.......
T Consensus 61 G~S~~~~---~~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~ 135 (262)
T 3r0v_A 61 GDSGDTP---PYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQ 135 (262)
T ss_dssp TTCCCCS---SCCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHH
T ss_pred cCCCCCC---CCCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHH
Confidence 9998764 6899999999999999999 99999999999999999999999 99999999987644333222222222
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhH-HhhhcccChhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH-ACWMHKMTQKDIQ 255 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 255 (405)
......+......... ..+...... ......+.+.......... .....+. ............+
T Consensus 136 ~~~~~~~~~~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 200 (262)
T 3r0v_A 136 TRLDALLAEGRRGDAV---------TYFMTEGVG---VPPDLVAQMQQAPMWPGME---AVAHTLPYDHAVMGDNTIPTA 200 (262)
T ss_dssp HHHHHHHHTTCHHHHH---------HHHHHHTSC---CCHHHHHHHHTSTTHHHHH---HTGGGHHHHHHHHTTSCCCHH
T ss_pred HHHHHHhhccchhhHH---------HHHhhcccC---CCHHHHHHHHhhhcccchH---HHHhhhhhhhhhhhcCCCCHH
Confidence 2222222211111110 001111000 0111111111100000000 0000000 0000001122346
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.+..+++|+++|+|++|.++|++.++++++.+ ++++++++++ || +++|+++++.|.+||+
T Consensus 201 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH---~~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 201 RFASISIPTLVMDGGASPAWIRHTAQELADTI-PNARYVTLENQTH---TVAPDAIAPVLVEFFT 261 (262)
T ss_dssp HHTTCCSCEEEEECTTCCHHHHHHHHHHHHHS-TTEEEEECCCSSS---SCCHHHHHHHHHHHHC
T ss_pred HcCcCCCCEEEEeecCCCCCCHHHHHHHHHhC-CCCeEEEecCCCc---ccCHHHHHHHHHHHHh
Confidence 67788999999999999999999999999987 8999999998 99 4799999999999985
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-32 Score=244.63 Aligned_cols=272 Identities=18% Similarity=0.228 Sum_probs=184.6
Q ss_pred CcccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..+++.+|.+++|..+|+ ++|+|||+||++++...|..+++.|.+ +||+|+++|+||
T Consensus 6 ~~~~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~G 63 (286)
T 3qit_A 6 EKFLEFGGNQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAA----------------------QGYRVVAPDLFG 63 (286)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTT
T ss_pred hheeecCCceEEEeecCCCCCCEEEEECCCCcccchHHHHHHHhhh----------------------cCeEEEEECCCC
Confidence 456889999999999997 457899999999999999999999988 489999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
+|.|..+.....++.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++...............
T Consensus 64 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 143 (286)
T 3qit_A 64 HGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQ 143 (286)
T ss_dssp STTSCCCSSGGGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHH
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHH
Confidence 99998776445789999999999999999999999999999999999999999999999999998764433321222222
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhc-cccCcccchhhhHHhh-hcc-----
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT-GMQSNYGFDGQIHACW-MHK----- 248 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~----- 248 (405)
+......+........ ................. ........+....... .......+........ ...
T Consensus 144 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 3qit_A 144 LTTCLDYLSSTPQHPI---FPDVATAASRLRQAIPS--LSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPG 218 (286)
T ss_dssp HHHHHHHHTCCCCCCC---BSSHHHHHHHHHHHSTT--SCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTT
T ss_pred HHHHHHHHhccccccc---cccHHHHHHHhhcCCcc--cCHHHHHHHhhccccccccceeeeechhhhcccccccccccc
Confidence 2222222221110000 00000000011111111 1111122222211110 0000000111110000 000
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHH
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALID 316 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~ 316 (405)
...+....+.++++|+++|+|++|.++|++..+.+.+.+ +++++++++|||++++++|+++++.|.+
T Consensus 219 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~ggH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 219 GRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTM-TQAKRVFLSGGHNLHIDAAAALASLILT 285 (286)
T ss_dssp HHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHS-TTSEEEEESSSSCHHHHTHHHHHHHHHC
T ss_pred chhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHC-CCCeEEEeeCCchHhhhChHHHHHHhhc
Confidence 122344567889999999999999999999999999986 8899999999999999999999998864
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=254.89 Aligned_cols=276 Identities=24% Similarity=0.323 Sum_probs=171.8
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+++.++|.+++|.+.|+++ +|||+||++++...|..+++.|.+ +|+|+++|+|||
T Consensus 7 ~~~~~~~~~~~~~~~~g~g~-~~vllHG~~~~~~~w~~~~~~l~~-----------------------~~~vi~~Dl~G~ 62 (291)
T 3qyj_A 7 QTIVDTTEARINLVKAGHGA-PLLLLHGYPQTHVMWHKIAPLLAN-----------------------NFTVVATDLRGY 62 (291)
T ss_dssp EEEEECSSCEEEEEEECCSS-EEEEECCTTCCGGGGTTTHHHHTT-----------------------TSEEEEECCTTS
T ss_pred eeEEecCCeEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEcCCCC
Confidence 45688899999999999775 599999999999999999999987 999999999999
Q ss_pred CCCCCCCCC---CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 97 GRSSVPVKK---TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 97 G~S~~~~~~---~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
|.|+.+... ..++.+.+++|+.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.+... .......
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~-~~~~~~~ 141 (291)
T 3qyj_A 63 GDSSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHK-MYRTTDQ 141 (291)
T ss_dssp TTSCCCCCCGGGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHH-HHHTCCH
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcch-hhhcchh
Confidence 999876542 248999999999999999999999999999999999999999999999999998752100 0000000
Q ss_pred HHHHHHHHHh--hccCh-hhhhccCcccccCHhHHHhhhCC-CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 174 QTLSIAIRFF--RAKTP-EKRAAVDLDTHYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 174 ~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
........+. ..... ...........+....+...... ..........+...+...... ...............
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 219 (291)
T 3qyj_A 142 EFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVI--HATCEDYRAAATIDL 219 (291)
T ss_dssp HHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHH--HHHHHHHHHHTTHHH
T ss_pred hhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcc--hhHHHHHHcccccch
Confidence 0000000000 00000 00000000000001111111110 001112222222222111000 000000000000000
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCH-HHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQI-CYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~-~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+....+.+++||+|+|+|++|.+.+. .....+.+. .++.+..++++||+++.|+|+++++.|.+||+.
T Consensus 220 ~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 220 EHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRER-AIDVSGQSLPCGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp HHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTT-BSSEEEEEESSSSCHHHHSHHHHHHHHHHHHHC
T ss_pred hhcchhcCCccccceEEEecccccccchhhHHHHHHhh-cCCcceeeccCCCCchhhCHHHHHHHHHHHHhc
Confidence 1112234567899999999999976432 233444443 478888888899999999999999999999974
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-32 Score=247.92 Aligned_cols=275 Identities=15% Similarity=0.144 Sum_probs=183.4
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
++.++++.+|.+++|...|++ |+|||+||++++...|.++++.|.+ +|+|+++|+|
T Consensus 8 ~~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~ 63 (297)
T 2qvb_A 8 GQPKYLEIAGKRMAYIDEGKG-DAIVFQHGNPTSSYLWRNIMPHLEG-----------------------LGRLVACDLI 63 (297)
T ss_dssp SCCEEEEETTEEEEEEEESSS-SEEEEECCTTCCGGGGTTTGGGGTT-----------------------SSEEEEECCT
T ss_pred CCceEEEECCEEEEEEecCCC-CeEEEECCCCchHHHHHHHHHHHhh-----------------------cCeEEEEcCC
Confidence 355678899999999999986 5799999999999999999999987 7999999999
Q ss_pred CCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 95 GMGRSSVPVK--KTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 95 G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
|||.|+.+.. ...++++++++|+.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++...... ....
T Consensus 64 G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~ 142 (297)
T 2qvb_A 64 GMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMT-WADW 142 (297)
T ss_dssp TSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBC-GGGS
T ss_pred CCCCCCCCCCccccCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCcc-CCCC
Confidence 9999986642 1238999999999999999999 9999999999999999999999999999999998753221 0111
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh------
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW------ 245 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 245 (405)
.... ......+......... .. ...+........... .........+...+.... ..............
T Consensus 143 ~~~~-~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 217 (297)
T 2qvb_A 143 PPAV-RGVFQGFRSPQGEPMA-LE-HNIFVERVLPGAILR-QLSDEEMNHYRRPFVNGG-EDRRPTLSWPRNLPIDGEPA 217 (297)
T ss_dssp CGGG-HHHHHHHTSTTHHHHH-HT-TCHHHHTHHHHTCSS-CCCHHHHHHHHGGGCSSS-GGGHHHHHHHHHSCBTTBSH
T ss_pred ChHH-HHHHHHHhcccchhhh-cc-ccHHHHHHHhccccc-cCCHHHHHHHHHHhcCcc-cchhhHHHHHHhccccCCch
Confidence 1111 1111111111100000 00 000000111110001 111111222222111100 00000000000000
Q ss_pred -hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 246 -MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 246 -~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
......+....+..+++|+|+|+|++|.++|++..+.+.+.+ ++ +++++ + ||+++.++|+++++.|.+||++..
T Consensus 218 ~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 218 EVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWP-NQ-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRLR 293 (297)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcccccccEEEEecCCCCcCCHHHHHHHHHHc-CC-eEEEe-cCccchhhhCHHHHHHHHHHHHHHHh
Confidence 000112334567788999999999999999999999999976 77 99999 7 999999999999999999998764
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=249.50 Aligned_cols=260 Identities=26% Similarity=0.375 Sum_probs=179.1
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
.+.+|.+++|...|+++ +|||+||++++...|. .++..|.+ +||+|+++|+||+|.
T Consensus 28 ~~~~~~~l~y~~~g~~~-~vv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G~ 84 (293)
T 3hss_A 28 PEFRVINLAYDDNGTGD-PVVFIAGRGGAGRTWHPHQVPAFLA----------------------AGYRCITFDNRGIGA 84 (293)
T ss_dssp TTSCEEEEEEEEECSSE-EEEEECCTTCCGGGGTTTTHHHHHH----------------------TTEEEEEECCTTSGG
T ss_pred cccccceEEEEEcCCCC-EEEEECCCCCchhhcchhhhhhHhh----------------------cCCeEEEEccCCCCC
Confidence 46789999999999654 6999999999999998 67887755 399999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHH
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (405)
|..+. .++.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++...... ........
T Consensus 85 s~~~~---~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~~~~~ 157 (293)
T 3hss_A 85 TENAE---GFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDR----ARQFFNKA 157 (293)
T ss_dssp GTTCC---SCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCH----HHHHHHHH
T ss_pred CCCcc---cCCHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCCh----hhhHHHHH
Confidence 97554 679999999999999999999999999999999999999999999999999998742110 01000000
Q ss_pred HHHHhh---ccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 179 AIRFFR---AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 179 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
...... .......... ...................+........... ..............+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 225 (293)
T 3hss_A 158 EAELYDSGVQLPPTYDARA--------RLLENFSRKTLNDDVAVGDWIAMFSMWPIKS----TPGLRCQLDCAPQTNRLP 225 (293)
T ss_dssp HHHHHHHTCCCCHHHHHHH--------HHHHHSCHHHHTCHHHHHHHHHHHHHSCCCC----CHHHHHHHTSSCSSCCHH
T ss_pred HHHHHhhcccchhhHHHHH--------HHhhhcccccccccccHHHHHHHHhhccccc----cHHHHhHhhhccccchHH
Confidence 000000 0000000000 0000000000000111111111111111110 111111112222334456
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
.+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.++|+++++.|.+||++..
T Consensus 226 ~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 226 AYRNIAAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFFASVK 292 (293)
T ss_dssp HHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTEEEEEETTCCTTHHHHSHHHHHHHHHHHHHTCC
T ss_pred HHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHC-CCceEEEeCCCcchHhhhCHHHHHHHHHHHHHhcC
Confidence 67889999999999999999999999999987 8999999998 999999999999999999998753
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-32 Score=245.25 Aligned_cols=260 Identities=16% Similarity=0.167 Sum_probs=177.9
Q ss_pred ccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 19 ALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
+++++|.+++|...|+++ +|||+||++++...|.+++..|.+. +||+|+++|+||||.
T Consensus 5 ~~~~~g~~l~y~~~g~~~-~vv~lhG~~~~~~~~~~~~~~l~~~---------------------~g~~v~~~d~~G~G~ 62 (272)
T 3fsg_A 5 KEYLTRSNISYFSIGSGT-PIIFLHGLSLDKQSTCLFFEPLSNV---------------------GQYQRIYLDLPGMGN 62 (272)
T ss_dssp CCEECTTCCEEEEECCSS-EEEEECCTTCCHHHHHHHHTTSTTS---------------------TTSEEEEECCTTSTT
T ss_pred EEEecCCeEEEEEcCCCC-eEEEEeCCCCcHHHHHHHHHHHhcc---------------------CceEEEEecCCCCCC
Confidence 477899999999999765 6999999999999999999888751 399999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH-hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHH
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDH-LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (405)
|+.+.. ++.+++++|+.+++++ ++.++++++||||||.+|+.+|.++|++|+++|++++..............
T Consensus 63 s~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--- 136 (272)
T 3fsg_A 63 SDPISP---STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKH--- 136 (272)
T ss_dssp CCCCSS---CSHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCC---
T ss_pred CCCCCC---CCHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccc---
Confidence 987664 8999999999999999 888999999999999999999999999999999999874221110000000
Q ss_pred HHHHHhhccChhhhhccCcccccC----HhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhh
Q 015550 178 IAIRFFRAKTPEKRAAVDLDTHYS----QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (405)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (405)
..... ........ ..+........ ......+..............+...+... .....+.
T Consensus 137 ---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 200 (272)
T 3fsg_A 137 ---------INILE--EDINPVENKEYFADFLSMNVIIN---NQAWHDYQNLIIPGLQKEDKTFIDQLQNN--YSFTFEE 200 (272)
T ss_dssp ---------CCEEC--SCCCCCTTGGGHHHHHHHCSEES---HHHHHHHHHHTHHHHHHCCHHHHHHHTTS--CSCTTHH
T ss_pred ---------hhhhh--hhhhcccCHHHHHHHHHHhccCC---CchhHHHHHHhhhhhhhccHHHHHHHhhh--cCCChhh
Confidence 00000 00000000 01111111000 01111111111000000000000000000 0111222
Q ss_pred hhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 254 ~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
...+..+++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ ||+++.++|+++++.|.+||++...
T Consensus 201 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 201 KLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHN-ENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp HHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTC-TTEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHHC
T ss_pred hhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhhc
Confidence 2345788999999999999999999999999876 8999999998 9999999999999999999988653
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-31 Score=246.91 Aligned_cols=265 Identities=19% Similarity=0.229 Sum_probs=183.4
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..+++..+|.+++|...|+ .|+||++||++++...|..+++.|.+ +|+|+++|+||
T Consensus 49 ~~~~~~~~~~~~~~~~~g~-~p~vv~lhG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~D~~G 104 (314)
T 3kxp_A 49 ISRRVDIGRITLNVREKGS-GPLMLFFHGITSNSAVFEPLMIRLSD-----------------------RFTTIAVDQRG 104 (314)
T ss_dssp EEEEEECSSCEEEEEEECC-SSEEEEECCTTCCGGGGHHHHHTTTT-----------------------TSEEEEECCTT
T ss_pred ceeeEEECCEEEEEEecCC-CCEEEEECCCCCCHHHHHHHHHHHHc-----------------------CCeEEEEeCCC
Confidence 3456788999999999998 55799999999999999999999987 89999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
+|.|..+. ..++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.+ ......
T Consensus 105 ~G~S~~~~--~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~-------~~~~~~ 175 (314)
T 3kxp_A 105 HGLSDKPE--TGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTP-------YIETEA 175 (314)
T ss_dssp STTSCCCS--SCCSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT-------TCCHHH
T ss_pred cCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCC-------CCCcch
Confidence 99998544 478999999999999999999999999999999999999999999999999999863 122222
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
.............. .. .......++........ ...........+..........+..............+..+
T Consensus 176 ~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
T 3kxp_A 176 LDALEARVNAGSQL----FE-DIKAVEAYLAGRYPNIP-ADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVP 249 (314)
T ss_dssp HHHHHHHTTTTCSC----BS-SHHHHHHHHHHHSTTSC-HHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHH
T ss_pred hhHHHHHhhhchhh----hc-CHHHHHHHHHhhcccCc-hHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhh
Confidence 22211111111000 00 00000011111111111 11111111111111100001111111111111112224455
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.+.++++|+|+|+|++|.++|++.++++.+.+ ++++++++++ ||+++.++|+++++.|.+||++
T Consensus 250 ~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 250 AYRDVTKPVLIVRGESSKLVSAAALAKTSRLR-PDLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp HHHHCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred HhhcCCCCEEEEecCCCccCCHHHHHHHHHhC-CCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 67789999999999999999999999999987 8899999998 9999999999999999999963
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=246.64 Aligned_cols=251 Identities=17% Similarity=0.163 Sum_probs=161.9
Q ss_pred EEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 26 ~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
+|+|...|+++++|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+
T Consensus 3 ~l~~~~~G~g~~~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~--- 56 (258)
T 1m33_A 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGF--- 56 (258)
T ss_dssp CCCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHHT-----------------------TSEEEEECCTTSTTCCSC---
T ss_pred ceEEEEecCCCCeEEEECCCCCChHHHHHHHHHhhc-----------------------CcEEEEeeCCCCCCCCCC---
Confidence 578999998764799999999999999999999987 899999999999999876
Q ss_pred CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC--CccchhHHHHHHHHHh
Q 015550 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--CPKLDLQTLSIAIRFF 183 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~ 183 (405)
..++++++++++.+. ++ ++++|+||||||.+|+.+|.++|++|+++|++++.+..... .+.............+
T Consensus 57 ~~~~~~~~~~~l~~~---l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (258)
T 1m33_A 57 GALSLADMAEAVLQQ---AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQL 132 (258)
T ss_dssp CCCCHHHHHHHHHTT---SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH---hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHH
Confidence 267888888776544 45 89999999999999999999999999999999976322111 1111111111111100
Q ss_pred hccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (405)
....... ...+...............+.+...+....... ...+..........+..+.+.++++|
T Consensus 133 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~P 198 (258)
T 1m33_A 133 SDDQQRT----------VERFLALQTMGTETARQDARALKKTVLALPMPE----VDVLNGGLEILKTVDLRQPLQNVSMP 198 (258)
T ss_dssp HHHHHHH----------HHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCC----HHHHHHHHHHHHHCCCTTGGGGCCSC
T ss_pred hccHHHH----------HHHHHHHHhcCCccchhhHHHHHHHHHhccCCc----HHHHHHHHHHHHhCCHHHHHhhCCCC
Confidence 0000000 000000000000001111111111111100000 00000000000011223456788999
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+++|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.|+|+++++.|.+|+++.
T Consensus 199 ~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 199 FLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp EEEEEETTCSSSCGGGCC-CTTTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred EEEEeecCCCCCCHHHHHHHHHhC-ccceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999999999999998888888765 8899999998 99999999999999999999753
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-31 Score=244.52 Aligned_cols=272 Identities=14% Similarity=0.148 Sum_probs=183.9
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..++++.+|.+++|...|++ |+|||+||++++...|..+++.|.+ +|+|+++|+||
T Consensus 10 ~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~G 65 (302)
T 1mj5_A 10 EKKFIEIKGRRMAYIDEGTG-DPILFQHGNPTSSYLWRNIMPHCAG-----------------------LGRLIACDLIG 65 (302)
T ss_dssp CCEEEEETTEEEEEEEESCS-SEEEEECCTTCCGGGGTTTGGGGTT-----------------------SSEEEEECCTT
T ss_pred cceEEEECCEEEEEEEcCCC-CEEEEECCCCCchhhhHHHHHHhcc-----------------------CCeEEEEcCCC
Confidence 34678899999999999985 5799999999999999999999987 78999999999
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 96 MGRSSVPVK--KTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 96 ~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
||.|+.+.. ...++++++++|+.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++...... .....
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~ 144 (302)
T 1mj5_A 66 MGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIE-WADFP 144 (302)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBC-GGGSC
T ss_pred CCCCCCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchh-hhhhh
Confidence 999986642 1238999999999999999999 9999999999999999999999999999999998753221 11111
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc----
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK---- 248 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 248 (405)
.... .....+..... ...... ...+...+....... .........+...+.... .. ...........
T Consensus 145 ~~~~-~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~ 215 (302)
T 1mj5_A 145 EQDR-DLFQAFRSQAG-EELVLQ-DNVFVEQVLPGLILR-PLSEAEMAAYREPFLAAG----EA-RRPTLSWPRQIPIAG 215 (302)
T ss_dssp GGGH-HHHHHHHSTTH-HHHHTT-TCHHHHTHHHHTSSS-CCCHHHHHHHHGGGCSSS----GG-GHHHHHTGGGSCBTT
T ss_pred HHHH-HHHHHHhccch-hhhhcC-hHHHHHHHHHhcCcc-cCCHHHHHHHHHHhhccc----cc-ccchHHHHHhccccc
Confidence 1111 11111111110 000000 000011111111111 111112222222211100 00 00000000000
Q ss_pred -------cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 249 -------MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 249 -------~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
...+....+..+++|+|+|+|++|.++|++.++.+.+.+ ++ +++++ + ||+++.++|+++++.|.+|+++
T Consensus 216 ~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 292 (302)
T 1mj5_A 216 TPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWP-NQ-TEITV-AGAHFIQEDSPDEIGAAIAAFVRR 292 (302)
T ss_dssp BSHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChHHHHHHHHhc-CC-ceEEe-cCcCcccccCHHHHHHHHHHHHHh
Confidence 112334567788999999999999999999999999876 77 99999 7 9999999999999999999998
Q ss_pred hcCC
Q 015550 321 SEKK 324 (405)
Q Consensus 321 ~~~~ 324 (405)
....
T Consensus 293 ~~~~ 296 (302)
T 1mj5_A 293 LRPA 296 (302)
T ss_dssp HSCC
T ss_pred hccc
Confidence 7643
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-32 Score=242.79 Aligned_cols=252 Identities=16% Similarity=0.132 Sum_probs=174.9
Q ss_pred EEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC--C
Q 015550 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP--V 103 (405)
Q Consensus 26 ~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~--~ 103 (405)
+++|...|+++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|+.+ .
T Consensus 10 ~l~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~D~~G~G~S~~~~~~ 66 (269)
T 4dnp_A 10 ALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLR-----------------------DYRVVLYDLVCAGSVNPDFFD 66 (269)
T ss_dssp HTTCEEECSCSSEEEEECCTTCCGGGGTTTGGGGTT-----------------------TCEEEEECCTTSTTSCGGGCC
T ss_pred HhhhhhcCCCCCEEEEEeCCCCcHHHHHHHHHHHhC-----------------------CcEEEEEcCCCCCCCCCCCCC
Confidence 467888899888999999999999999999999987 999999999999999652 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc---chhHHHHHHH
Q 015550 104 KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK---LDLQTLSIAI 180 (405)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~ 180 (405)
....++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.......... ..........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (269)
T 4dnp_A 67 FRRYTTLDPYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVF 146 (269)
T ss_dssp TTTCSSSHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHH
T ss_pred ccccCcHHHHHHHHHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHH
Confidence 2234589999999999999999999999999999999999999999999999999987533221111 1111121111
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (405)
........... ..+......... ....+.+...+...... ............+..+.+.++
T Consensus 147 ~~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i 207 (269)
T 4dnp_A 147 SAMEANYEAWV----------NGFAPLAVGADV--PAAVREFSRTLFNMRPD-------ITLFVSRTVFNSDMRGVLGLV 207 (269)
T ss_dssp HHHHHCHHHHH----------HHHHHHHHCSSC--HHHHHHHHHHHHHSCHH-------HHHHHHHHHHTCCCGGGGGGC
T ss_pred HhccccHHHHH----------HHhhhhhccCCC--hhHHHHHHHHHHccCcc-------hhhhHhhhhcchhhHhhhccc
Confidence 11111100000 001111111111 11222222222111100 001111111122334567788
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhCCC-eEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~-~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
++|+++|+|++|.++|++.++++.+.+ ++ ++++++++ ||+++.++|+++++.|.+||++
T Consensus 208 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 208 KVPCHIFQTARDHSVPASVATYLKNHL-GGKNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp CSCEEEEEEESBTTBCHHHHHHHHHHS-SSCEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred cCCEEEEecCCCcccCHHHHHHHHHhC-CCCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 999999999999999999999999987 66 89999997 9999999999999999999964
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.1e-32 Score=245.77 Aligned_cols=266 Identities=17% Similarity=0.220 Sum_probs=182.6
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.++++++.+++|...|+++|+|||+||++++...|.+++..|.. +||+|+++|+||||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~G~G 63 (279)
T 4g9e_A 6 HELETSHGRIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIG----------------------KKWRVIAPDLPGHG 63 (279)
T ss_dssp EEEEETTEEEEEEECCCCEEEEEEECCTTCCGGGGHHHHHSHHH----------------------HHEEEEEECCTTST
T ss_pred EEEEcCCceEEEEecCCCCCeEEEECCCCCchhHHHHHHhHHHh----------------------cCCeEEeecCCCCC
Confidence 34778888999999988778899999999999999999998444 39999999999999
Q ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH
Q 015550 98 RSSVPVK-KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 98 ~S~~~~~-~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
.|+.+.. ...++++++++|+.+++++++.++++++||||||.+|+.+|.++|+ +.++|+++++...... .
T Consensus 64 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~-------~- 134 (279)
T 4g9e_A 64 KSTDAIDPDRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREE-------V- 134 (279)
T ss_dssp TSCCCSCHHHHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGG-------H-
T ss_pred CCCCCCCcccCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCc-------c-
Confidence 9987532 2367899999999999999999999999999999999999999998 9999999876422110 0
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
. ..+.....................+........... .....+..... .........+......+....
T Consensus 135 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 203 (279)
T 4g9e_A 135 G--QGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEA-SLLDIVARTDG--------RARRIMFEKFGSGTGGNQRDI 203 (279)
T ss_dssp H--HHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCH-HHHHHHHHSCH--------HHHHHHHHHHHHTCBCCHHHH
T ss_pred c--hhhccchhhhhcCcccccHHHHHHHHHhhccCcccH-HHHHHHHhhhc--------cchHHHHHHhhccCCchHHHH
Confidence 0 000000000000000000011111222222211111 11111111000 000001111111122334455
Q ss_pred hhhcCCcEEEEeecCCccCCHHHHHHHH-HHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCCCC
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYARRLA-EKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKIS 326 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~~~l~-~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~~~ 326 (405)
+..+++|+|+|+|++|.++|++..+.+. +. .++++++++++ ||+++.++|+++++.|.+||++......
T Consensus 204 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~~ 274 (279)
T 4g9e_A 204 VAEAQLPIAVVNGRDEPFVELDFVSKVKFGN-LWEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQLEH 274 (279)
T ss_dssp HHHCCSCEEEEEETTCSSBCHHHHTTCCCSS-BGGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSSCC
T ss_pred HHhcCCCEEEEEcCCCcccchHHHHHHhhcc-CCCCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhhhh
Confidence 7788999999999999999999999887 54 48899999998 9999999999999999999999876544
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=251.01 Aligned_cols=261 Identities=17% Similarity=0.180 Sum_probs=176.5
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
....+++.+++|..+|+++|+|||+||++++...|..++..| ||+|+++|+||+|
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~~vv~~hG~~~~~~~~~~~~~~l-------------------------g~~Vi~~D~~G~G 117 (330)
T 3p2m_A 63 EVERVQAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGL-------------------------GEPALAVDLPGHG 117 (330)
T ss_dssp CEEEEEETTEEEEEESSSCCSEEEECCTTCCGGGGHHHHHHS-------------------------CCCEEEECCTTST
T ss_pred CceeecCceEEEEEeCCCCCeEEEECCCCCccchHHHHHHHc-------------------------CCeEEEEcCCCCC
Confidence 345567778999999998888999999999999999988776 6899999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHH
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (405)
.|+.+.. ..++.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+ .....
T Consensus 118 ~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~-------~~~~~--- 186 (330)
T 3p2m_A 118 HSAWRED-GNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTP-------SALQR--- 186 (330)
T ss_dssp TSCCCSS-CBCCHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCH-------HHHHH---
T ss_pred CCCCCCC-CCCCHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCC-------ccchh---
Confidence 9986554 478999999999999999999999999999999999999999999999999999762 11100
Q ss_pred HHHHHhhccChhhhhccC-ccc-ccCHhHHHhhh--CCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhh
Q 015550 178 IAIRFFRAKTPEKRAAVD-LDT-HYSQEYLEEYV--GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (405)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (405)
................ ... ......+.... ............+......... .. +..............+.
T Consensus 187 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 261 (330)
T 3p2m_A 187 --HAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDN-GN--WVWRYDAIRTFGDFAGL 261 (330)
T ss_dssp --HHHHTCC-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSS-SC--EEESSCCCSBCCCHHHH
T ss_pred --hhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCC-Cc--eEEeechhhCccccHHH
Confidence 0000000000000000 000 00011111111 0111111122222211111000 00 00000000000111122
Q ss_pred hhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeE-EEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR-MIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 254 ~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~-l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.+.+.++++|+|+|+|++|.++|++.++++.+.+ ++++ ++++++ ||+++.++|+++++.|.+||++
T Consensus 262 ~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 262 WDDVDALSAPITLVRGGSSGFVTDQDTAELHRRA-THFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp HHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHC-SSEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred HHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 4567889999999999999999999999999987 8888 999998 9999999999999999999864
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-31 Score=242.39 Aligned_cols=250 Identities=14% Similarity=0.124 Sum_probs=161.7
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
+++|||+||++++...|.++++.|.+ +||+|+++|+||||.|+.+.. ..++++++++
T Consensus 4 ~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~rVia~Dl~G~G~S~~~~~-~~~~~~~~a~ 60 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWSWYKLKPLLEA----------------------AGHKVTALDLAASGTDLRKIE-ELRTLYDYTL 60 (273)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEECCCTTSTTCCCCGG-GCCSHHHHHH
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHh----------------------CCCEEEEecCCCCCCCccCcc-cccCHHHHHH
Confidence 46799999999999999999999975 389999999999999976432 3579999999
Q ss_pred HHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccC-hhhhh-
Q 015550 116 DVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT-PEKRA- 192 (405)
Q Consensus 116 dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 192 (405)
|+.+++++++ .++++|+||||||++++.+|.++|++|+++|++++......... ............... .....
T Consensus 61 dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 137 (273)
T 1xkl_A 61 PLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNS---SFVLEQYNERTPAENWLDTQFL 137 (273)
T ss_dssp HHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCT---THHHHHHHHTSCTTTTTTCEEE
T ss_pred HHHHHHHHhccCCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcH---HHHHHHhhccCChhhHHHHHHh
Confidence 9999999997 58999999999999999999999999999999997532211110 011111111000000 00000
Q ss_pred ccC------cccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEE
Q 015550 193 AVD------LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (405)
Q Consensus 193 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlv 266 (405)
... .......++............ .. .+........ ..+...+.. ...... . ...++|+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~----~~~~~~~~~--~~~~~~---~--~~~~~P~l~ 204 (273)
T 1xkl_A 138 PYGSPEEPLTSMFFGPKFLAHKLYQLCSPE-DL-ALASSLVRPS----SLFMEDLSK--AKYFTD---E--RFGSVKRVY 204 (273)
T ss_dssp ECSCTTSCCEEEECCHHHHHHHTSTTSCHH-HH-HHHHHHCCCB----CCCHHHHHH--CCCCCT---T--TGGGSCEEE
T ss_pred hccCCCCCccccccCHHHHHHHhhccCCHH-HH-HHHHHhcCCC----chhhhhhhc--ccccch---h--hhCCCCeEE
Confidence 000 000112222222221111110 00 1111110000 000000000 000000 1 113689999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCCC
Q 015550 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 267 i~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~~ 325 (405)
|+|++|.++|++.++++++.+ ++++++++++ ||++++|+|+++++.|.+|+++.....
T Consensus 205 i~G~~D~~~p~~~~~~~~~~~-p~~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~~~~~ 263 (273)
T 1xkl_A 205 IVCTEDKGIPEEFQRWQIDNI-GVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKYNMAG 263 (273)
T ss_dssp EEETTCTTTTHHHHHHHHHHH-CCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHCC---
T ss_pred EEeCCccCCCHHHHHHHHHhC-CCCeEEEeCCCCCCchhcCHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999987 8999999998 999999999999999999998765443
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-31 Score=241.27 Aligned_cols=245 Identities=14% Similarity=0.143 Sum_probs=158.6
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
++|+|||+||++++...|.++++.|.+ +||+|+++|+||||.|+.+.. ..+++++++
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~via~Dl~G~G~S~~~~~-~~~~~~~~a 65 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLES----------------------AGHKVTAVDLSAAGINPRRLD-EIHTFRDYS 65 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHHH
T ss_pred CCCeEEEECCCccccchHHHHHHHHHh----------------------CCCEEEEeecCCCCCCCCCcc-cccCHHHHH
Confidence 345799999999999999999999965 389999999999999976432 357999999
Q ss_pred HHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc-Chhhhh
Q 015550 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK-TPEKRA 192 (405)
Q Consensus 115 ~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 192 (405)
+|+.+++++++ .++++|+||||||++++.+|.++|++|+++|++++......... .............. ......
T Consensus 66 ~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 142 (264)
T 2wfl_A 66 EPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSL---TYPFEKYNEKCPADMMLDSQF 142 (264)
T ss_dssp HHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCT---THHHHHHHHHSCTTTTTTCEE
T ss_pred HHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcch---hhHHHHhhhcCcchhhhhhhh
Confidence 99999999996 58999999999999999999999999999999997532111110 01111111111000 000000
Q ss_pred -cc------CcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEE
Q 015550 193 -AV------DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (405)
Q Consensus 193 -~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (405)
.. ........+++............ . .+......... .....+.. ...... . ...++|+|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~----~~~~~~~~--~~~~~~---~--~~~~~P~l 209 (264)
T 2wfl_A 143 STYGNPENPGMSMILGPQFMALKMFQNCSVED-L-ELAKMLTRPGS----LFFQDLAK--AKKFST---E--RYGSVKRA 209 (264)
T ss_dssp EEESCTTSCEEEEECCHHHHHHHTSTTSCHHH-H-HHHHHHCCCEE----CCHHHHTT--SCCCCT---T--TGGGSCEE
T ss_pred hhccCCCCCcchhhhhHHHHHHHHhcCCCHHH-H-HHHHhccCCCc----cccccccc--ccccCh---H--HhCCCCeE
Confidence 00 00001122222222111111100 0 11111100000 00000000 000000 1 11358999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 266 vi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+|+|++|.++|++.++.+++.+ ++++++++++ ||++++|+|+++++.|.+|++
T Consensus 210 ~i~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 210 YIFCNEDKSFPVEFQKWFVESV-GADKVKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp EEEETTCSSSCHHHHHHHHHHH-CCSEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred EEEeCCcCCCCHHHHHHHHHhC-CCceEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 9999999999999999999988 8999999998 999999999999999999974
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-31 Score=240.29 Aligned_cols=244 Identities=14% Similarity=0.145 Sum_probs=160.3
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
+++|||+||++.+...|..+++.|.+ +||+|+++|+||||.|+.+.. ..++++++++
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~via~Dl~G~G~S~~~~~-~~~~~~~~a~ 59 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEA----------------------LGHKVTALDLAASGVDPRQIE-EIGSFDEYSE 59 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHHTH
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHh----------------------CCCEEEEeCCCCCCCCCCCcc-cccCHHHHHH
Confidence 45799999999999999999999975 389999999999999976432 3589999999
Q ss_pred HHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh-c
Q 015550 116 DVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA-A 193 (405)
Q Consensus 116 dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 193 (405)
|+.+++++++ .++++|+||||||++++.+|.++|++|+++|++++......... ............ ....... .
T Consensus 60 dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~ 135 (257)
T 3c6x_A 60 PLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCP---SYVVDKLMEVFP-DWKDTTYFT 135 (257)
T ss_dssp HHHHHHHTSCTTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCT---THHHHHHHHHSC-CCTTCEEEE
T ss_pred HHHHHHHhccccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcc---hhHHHHHhhcCc-chhhhhhhh
Confidence 9999999995 58999999999999999999999999999999998632211111 011111111110 0000000 0
Q ss_pred cC------cccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEE
Q 015550 194 VD------LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (405)
Q Consensus 194 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi 267 (405)
.. .......++....+....... ... ........ .. .....+.. ..... ...+ .++|+|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~--~~--~~~~~~~~--~~~~~---~~~~--~~~P~l~i 202 (257)
T 3c6x_A 136 YTKDGKEITGLKLGFTLLRENLYTLCGPE-EYE-LAKMLTRK--GS--LFQNILAK--RPFFT---KEGY--GSIKKIYV 202 (257)
T ss_dssp EEETTEEEEEEECCHHHHHHHTSTTSCHH-HHH-HHHHHCCC--BC--CCHHHHHH--SCCCC---TTTG--GGSCEEEE
T ss_pred ccCCCCccccccccHHHHHHHHhcCCCHH-HHH-HHHHhcCC--Cc--cchhhhcc--ccccC---hhhc--CcccEEEE
Confidence 00 001122233322221111111 011 11111000 00 00000000 00000 0111 25899999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+|++|.++|++.++++++.+ ++++++++++ ||++++|+|+++++.|.+|++.
T Consensus 203 ~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 203 WTDQDEIFLPEFQLWQIENY-KPDKVYKVEGGDHKLQLTKTKEIAEILQEVADT 255 (257)
T ss_dssp ECTTCSSSCHHHHHHHHHHS-CCSEEEECCSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred EeCCCcccCHHHHHHHHHHC-CCCeEEEeCCCCCCcccCCHHHHHHHHHHHHHh
Confidence 99999999999999999987 8999999988 9999999999999999999975
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.98 E-value=9.7e-32 Score=246.43 Aligned_cols=225 Identities=17% Similarity=0.187 Sum_probs=156.6
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
+.|||+||++++...|.++++.|.+ +||+|+++|+||||.|+... ..++.+++++|
T Consensus 52 ~~VlllHG~~~s~~~~~~la~~La~----------------------~Gy~Via~Dl~GhG~S~~~~--~~~~~~~~~~d 107 (281)
T 4fbl_A 52 IGVLVSHGFTGSPQSMRFLAEGFAR----------------------AGYTVATPRLTGHGTTPAEM--AASTASDWTAD 107 (281)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEECCCTTSSSCHHHH--HTCCHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEECCCCCCCCCccc--cCCCHHHHHHH
Confidence 3599999999999999999999988 49999999999999996443 26689999999
Q ss_pred HHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhcc
Q 015550 117 VIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (405)
Q Consensus 117 l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
+.++++.+ +.++++|+||||||.+|+.+|.++|++|+++|++++.... ...... ...+..... ....
T Consensus 108 ~~~~~~~l~~~~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~-------~~~~~~-~~~~~~~~~-~~~~-- 176 (281)
T 4fbl_A 108 IVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRM-------ESPDLA-ALAFNPDAP-AELP-- 176 (281)
T ss_dssp HHHHHHHHHHHCSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCC-------CCHHHH-HHHTCTTCC-SEEE--
T ss_pred HHHHHHHHHhCCCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcc-------cchhhH-HHHHhHhhH-Hhhh--
Confidence 99999987 5679999999999999999999999999999999986311 111110 011110000 0000
Q ss_pred CcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCcc
Q 015550 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (405)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~ 274 (405)
........+.......... . ...+.... .........+.++++|+|+|+|++|.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~-~----------------------~~~~~~~~--~~~~~~~~~l~~i~~P~Lii~G~~D~~ 231 (281)
T 4fbl_A 177 GIGSDIKAEGVKELAYPVT-P----------------------VPAIKHLI--TIGAVAEMLLPRVKCPALIIQSREDHV 231 (281)
T ss_dssp CCCCCCSSTTCCCCCCSEE-E----------------------GGGHHHHH--HHHHHHHHHGGGCCSCEEEEEESSCSS
T ss_pred cchhhhhhHHHHHhhhccC-c----------------------hHHHHHHH--HhhhhccccccccCCCEEEEEeCCCCC
Confidence 0000000000000000000 0 00000000 001122345678899999999999999
Q ss_pred CCHHHHHHHHHHhC-CCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhh
Q 015550 275 AQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKAS 321 (405)
Q Consensus 275 ~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~ 321 (405)
+|++.++.+++.+. ++++++++++ ||.++++ +++++.+.|.+||+++
T Consensus 232 v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 232 VPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp SCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 99999999999873 5679999998 9999887 5999999999999864
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-31 Score=235.61 Aligned_cols=232 Identities=18% Similarity=0.186 Sum_probs=167.9
Q ss_pred cccCCEEEEEEEccCC-----CCeEEEEecCCCC--CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 20 LNDNGIKIFYRTYGRG-----PTKVILITGLAGT--HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~-----~p~vvllHG~~~~--~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
++.+|.+|++..+++. .|+|||+||++++ ...|..+++.|.+ +||+|+++|
T Consensus 6 ~~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D 63 (251)
T 2wtm_A 6 IDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNE----------------------IGVATLRAD 63 (251)
T ss_dssp EEETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHH----------------------TTCEEEEEC
T ss_pred EecCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHHH----------------------CCCEEEEec
Confidence 5679999999877642 3579999999999 7789999999986 499999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+||||.|+.+. ..++.+++++|+.++++.+. .++++++||||||.+|+.+|.++|++|+++|++++...
T Consensus 64 ~~G~G~S~~~~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~----- 136 (251)
T 2wtm_A 64 MYGHGKSDGKF--EDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAM----- 136 (251)
T ss_dssp CTTSTTSSSCG--GGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTT-----
T ss_pred CCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHH-----
Confidence 99999997644 36789999999999999884 56899999999999999999999999999999987521
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
.... ..... ... .. .......+.+..... ..... .+. . ..
T Consensus 137 --~~~~----~~~~~-~~~----~~--~~~~~~~~~~~~~~~-~~~~~----~~~------------------~----~~ 176 (251)
T 2wtm_A 137 --IPEI----ARTGE-LLG----LK--FDPENIPDELDAWDG-RKLKG----NYV------------------R----VA 176 (251)
T ss_dssp --HHHH----HHHTE-ETT----EE--CBTTBCCSEEEETTT-EEEET----HHH------------------H----HH
T ss_pred --hHHH----Hhhhh-hcc----cc--CCchhcchHHhhhhc-cccch----HHH------------------H----HH
Confidence 0000 00000 000 00 000000000000000 00000 000 0 00
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
...+..+.+.++++|+|+|+|++|.++|++.++++++.+ ++++++++++ ||++ .++|+++++.|.+||++..
T Consensus 177 ~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~ 249 (251)
T 2wtm_A 177 QTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY-KNCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQI 249 (251)
T ss_dssp TTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHS-SSEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhC-CCcEEEEECCCCccc-chhHHHHHHHHHHHHHHhc
Confidence 011233456788999999999999999999999999987 8999999998 9999 9999999999999998754
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=249.03 Aligned_cols=123 Identities=33% Similarity=0.482 Sum_probs=111.6
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+++.+|.+++|...|+ ..|+|||+||++++...|..+++.|.+ +||+|+++|+|
T Consensus 6 ~~~~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~d~~ 63 (356)
T 2e3j_A 6 RILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAG----------------------AGYRVVAIDQR 63 (356)
T ss_dssp EEEEETTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHH----------------------TTCEEEEECCT
T ss_pred EEEccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHH----------------------cCCEEEEEcCC
Confidence 45778999999999995 567899999999999999999999976 38999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
|||.|..+.....++.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|+++++.
T Consensus 64 g~g~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 64 GYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp TSTTSCCCCSGGGGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 99999876543467999999999999999999999999999999999999999999999999999764
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=240.58 Aligned_cols=255 Identities=17% Similarity=0.204 Sum_probs=176.3
Q ss_pred EEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCC-
Q 015550 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK- 104 (405)
Q Consensus 26 ~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~- 104 (405)
+++|...|+++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|..+..
T Consensus 18 ~~~~~~~g~~~~~vv~lHG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~d~~G~G~s~~~~~~ 74 (282)
T 3qvm_A 18 RNNINITGGGEKTVLLAHGFGCDQNMWRFMLPELEK-----------------------QFTVIVFDYVGSGQSDLESFS 74 (282)
T ss_dssp HTTCEEEECSSCEEEEECCTTCCGGGGTTTHHHHHT-----------------------TSEEEECCCTTSTTSCGGGCC
T ss_pred hcceeecCCCCCeEEEECCCCCCcchHHHHHHHHhc-----------------------CceEEEEecCCCCCCCCCCCC
Confidence 456777888878999999999999999999999997 99999999999999986542
Q ss_pred C-CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCc----cchhHHHHHH
Q 015550 105 K-TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP----KLDLQTLSIA 179 (405)
Q Consensus 105 ~-~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~ 179 (405)
. ...+++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++........+ ..........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 3qvm_A 75 TKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEEL 154 (282)
T ss_dssp TTGGGSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHH
Confidence 1 2348999999999999999999999999999999999999999999999999998753222110 1111112111
Q ss_pred HHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhh
Q 015550 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (405)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (405)
............ .......... .........+...+..... .............+....+.+
T Consensus 155 ~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 216 (282)
T 3qvm_A 155 INLMDKNYIGWA----------NYLAPLVMGA-SHSSELIGELSGSFCTTDP-------IVAKTFAKATFFSDYRSLLED 216 (282)
T ss_dssp HHHHHHCHHHHH----------HHHHHHHHCT-TSCHHHHHHHHHHHHHSCH-------HHHHHHHHHHHSCBCGGGGGG
T ss_pred HHHHhcchhhHH----------HHHHhhccCC-ccchhhHHHHHHHHhcCCc-------HHHHHHHHHHhcccHHHHHhc
Confidence 111111100000 0001111111 1111111222221111100 001111111112233355678
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+++|+++|+|++|.++|++.++.+.+.+ ++++++++++ ||+++.++|+++++.|.+||++..
T Consensus 217 i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 217 ISTPALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLHMTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp CCSCEEEEEEEECTTCCHHHHHHHHHHS-SSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHC-
T ss_pred CCCCeEEEEeCCCCcCCHHHHHHHHHhC-CCCcEEEecCCCCcccccCHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999987 8999999998 999999999999999999998764
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=242.23 Aligned_cols=253 Identities=17% Similarity=0.177 Sum_probs=176.5
Q ss_pred CcccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..+++.++.+++|...|+ +.|+|||+||++++...|..+++.|.+ ||+|+++|+||
T Consensus 47 ~~~v~~~~~~~~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~-----------------------g~~vi~~D~~G 103 (306)
T 2r11_A 47 SFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTMWYPNIADWSS-----------------------KYRTYAVDIIG 103 (306)
T ss_dssp EEEECCTTEEEEEEEESCTTSCEEEEECCTTTCGGGGTTTHHHHHH-----------------------HSEEEEECCTT
T ss_pred eEEEecCCceEEEEeeCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEecCCC
Confidence 456788899999999986 457899999999999999999999987 99999999999
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 96 M-GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~-G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
+ |.|..+.. .++.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... ....
T Consensus 104 ~gG~s~~~~~--~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~ 177 (306)
T 2r11_A 104 DKNKSIPENV--SGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLP----FHHD 177 (306)
T ss_dssp SSSSCEECSC--CCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSC----CCHH
T ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCc----ccHH
Confidence 9 88876543 689999999999999999999999999999999999999999999999999998753211 1111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchh-HHH--HHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRR-AIL--YQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
.... ...... ......+........... ... .......+.. ... .+... .......
T Consensus 178 ~~~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~----~~~~~~~ 236 (306)
T 2r11_A 178 FYKY---ALGLTA----------SNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQD-GSR---NPNPN----ADGFPYV 236 (306)
T ss_dssp HHHH---HHTTTS----------TTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCS-SSC---CCCCC----TTSSSCB
T ss_pred HHHH---HhHHHH----------HHHHHHHHHHhhCCccccccccccccHHHHHHHH-hhh---hhhhh----ccCCCCC
Confidence 1110 000000 000001111111100000 000 0000010000 000 00000 0000111
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
.....+.++++|+|+|+|++|.++|++.++++.+...++++++++++ ||+++.++|+++++.|.+||+
T Consensus 237 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 237 FTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp CCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred CCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 23456778899999999999999999988866665558999999998 999999999999999999985
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=239.92 Aligned_cols=262 Identities=22% Similarity=0.290 Sum_probs=172.0
Q ss_pred CCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 23 NGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 23 ~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
++.+++|...++ ..|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|
T Consensus 30 ~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~G~G~s 87 (315)
T 4f0j_A 30 QPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLAD----------------------AGYRVIAVDQVGFCKS 87 (315)
T ss_dssp EEEEEEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTS
T ss_pred CCeeEEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHH----------------------CCCeEEEeecCCCCCC
Confidence 345677777754 457899999999999999999999987 4899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHH
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
+.+.. ..++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++...................
T Consensus 88 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 166 (315)
T 4f0j_A 88 SKPAH-YQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDW 166 (315)
T ss_dssp CCCSS-CCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHH
T ss_pred CCCCc-cccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHH
Confidence 87654 47899999999999999999999999999999999999999999999999999986321100000000011111
Q ss_pred HHHhhccChhhhhccCcccccCHhHHHhhhCC---CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS---STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
............. .+....... .................... ....+. ...........+....
T Consensus 167 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~ 233 (315)
T 4f0j_A 167 YRRDLQTSAEGIR----------QYQQATYYAGEWRPEFDRWVQMQAGMYRGKGR-ESVAWN--SALTYDMIFTQPVVYE 233 (315)
T ss_dssp HHHHTTCCHHHHH----------HHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTH-HHHHHH--HHHHHHHHHHCCCGGG
T ss_pred HhhcccCChHHHH----------HHHHHHHhccccCCchHHHHHHHHHHhhccCc-chhhHH--HHHhcCccccchhhhh
Confidence 1111111110000 000000000 00000000110000000000 000000 0000000011123345
Q ss_pred hhhcCCcEEEEeecCCccCC----------------HHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 257 IRSAGFLVSVIHGRHDVIAQ----------------ICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~----------------~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+.++++|+|+|+|++|.++| .+.++.+.+.+ ++++++++++ ||+++.++|+++++.|.+||+
T Consensus 234 l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 312 (315)
T 4f0j_A 234 LDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI-PQATLVEFPDLGHTPQIQAPERFHQALLEGLQ 312 (315)
T ss_dssp GGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHS-TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred cccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhc-CCceEEEeCCCCcchhhhCHHHHHHHHHHHhc
Confidence 77889999999999999999 88889999876 8999999998 999999999999999999996
Q ss_pred hh
Q 015550 320 AS 321 (405)
Q Consensus 320 ~~ 321 (405)
+.
T Consensus 313 ~~ 314 (315)
T 4f0j_A 313 TQ 314 (315)
T ss_dssp C-
T ss_pred cC
Confidence 53
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=258.11 Aligned_cols=268 Identities=21% Similarity=0.307 Sum_probs=184.1
Q ss_pred CCcccccCCccccCCCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCC
Q 015550 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80 (405)
Q Consensus 1 mp~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 80 (405)
|||.++. +.+.+|.+++|...|++ |+|||+||++++...|.++++.|..
T Consensus 1 Mp~i~~~-----------~~~~dG~~l~y~~~G~g-p~VV~lHG~~~~~~~~~~l~~~La~------------------- 49 (456)
T 3vdx_A 1 MPFITVG-----------QENSTSIDLYYEDHGTG-VPVVLIHGFPLSGHSWERQSAALLD------------------- 49 (456)
T ss_dssp -CEEEEE-----------EETTEEEEEEEEEESSS-EEEEEECCTTCCGGGGTTHHHHHHH-------------------
T ss_pred CCeEeec-----------ccccCCeEEEEEEeCCC-CEEEEECCCCCcHHHHHHHHHHHHH-------------------
Confidence 7777665 25679999999999966 5799999999999999999999965
Q ss_pred CCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-CcccceEEEec
Q 015550 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLN 159 (405)
Q Consensus 81 l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~ 159 (405)
+||+|+++|+||||.|+.+.. .++++++++|+.+++++++.++++++||||||.+++.+|+.+ |++|+++|+++
T Consensus 50 ---~Gy~Vi~~D~rG~G~S~~~~~--~~s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~ 124 (456)
T 3vdx_A 50 ---AGYRVITYDRRGFGQSSQPTT--GYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLA 124 (456)
T ss_dssp ---HTEEEEEECCTTSTTSCCCSS--CCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEES
T ss_pred ---CCcEEEEECCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeC
Confidence 399999999999999987664 789999999999999999999999999999999999998887 99999999999
Q ss_pred cCCCCCCCCccc-----hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCC-----CchhHHHHHHHHhhhhhc
Q 015550 160 VTGGGFQCCPKL-----DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-----STRRAILYQEYVKGISAT 229 (405)
Q Consensus 160 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 229 (405)
+........... .................... ..+...++.. ..........+.......
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (456)
T 3vdx_A 125 SLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFY----------TGFFNDFYNLDENLGTRISEEAVRNSWNTAASG 194 (456)
T ss_dssp CCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHH----------HHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTS
T ss_pred CcccccccccccccccchHHHHHHHHHhhhccchHHH----------HHHHHHHhcccccccccccHHHHHHHhhhcccc
Confidence 875432211100 11111111111111100000 0011111100 011111112221111111
Q ss_pred cccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHH-HHHHHHHHhCCCeEEEEcCC-CccccccCH
Q 015550 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERT 307 (405)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~-~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p 307 (405)
... ... .+......+..+.+..+++|+|+|+|++|.++|++ ..+.+.+.+ ++++++++++ ||+++.++|
T Consensus 195 ~~~------~~~--~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~-~~~~~~~i~gagH~~~~e~p 265 (456)
T 3vdx_A 195 GFF------AAA--AAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEGAPHGLLWTHA 265 (456)
T ss_dssp CTT------HHH--HGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHC-TTSEEEEETTCCSCTTTTTH
T ss_pred chh------hhh--hhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHC-CCceEEEeCCCCCcchhhCH
Confidence 000 000 01111122334567788999999999999999998 666777755 8999999998 999999999
Q ss_pred HHHHHHHHHHHHhhcC
Q 015550 308 EEVNQALIDLIKASEK 323 (405)
Q Consensus 308 ~~v~~~i~~fl~~~~~ 323 (405)
+++.+.|.+||++...
T Consensus 266 ~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 266 EEVNTALLAFLAKALE 281 (456)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999987653
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=234.92 Aligned_cols=233 Identities=14% Similarity=0.186 Sum_probs=156.6
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
++..++|. +. +|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|...
T Consensus 6 ~~~~~~~~--~~-~~~vvllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~GhG~s~~~ 60 (247)
T 1tqh_A 6 PPKPFFFE--AG-ERAVLLLHGFTGNSADVRMLGRFLES----------------------KGYTCHAPIYKGHGVPPEE 60 (247)
T ss_dssp CCCCEEEC--CS-SCEEEEECCTTCCTHHHHHHHHHHHH----------------------TTCEEEECCCTTSSSCHHH
T ss_pred CCCCeeeC--CC-CcEEEEECCCCCChHHHHHHHHHHHH----------------------CCCEEEecccCCCCCCHHH
Confidence 55566666 43 45799999999999999999999975 3999999999999977432
Q ss_pred CCCCCCCHHHHHHHHH---HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHH
Q 015550 103 VKKTEYTTKIMAKDVI---ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~---~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
. ..++.+++++|+. +++++++.++++|+||||||.+|+.+|.++| |+++|+++++.... .........
T Consensus 61 ~--~~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~-----~~~~~~~~~ 131 (247)
T 1tqh_A 61 L--VHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIK-----SEETMYEGV 131 (247)
T ss_dssp H--TTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCC-----CHHHHHHHH
T ss_pred h--cCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecC-----cchhhhHHH
Confidence 2 2467888877664 4667778899999999999999999999999 99999987643110 000000000
Q ss_pred HHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhh
Q 015550 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (405)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (405)
...... +. ...... .. ........+.... ......+.. ...+..+.+++
T Consensus 132 ~~~~~~------------------~~-~~~~~~--~~-~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~l~~ 180 (247)
T 1tqh_A 132 LEYARE------------------YK-KREGKS--EE-QIEQEMEKFKQTP----MKTLKALQE-----LIADVRDHLDL 180 (247)
T ss_dssp HHHHHH------------------HH-HHHTCC--HH-HHHHHHHHHTTSC----CTTHHHHHH-----HHHHHHHTGGG
T ss_pred HHHHHH------------------hh-cccccc--hH-HHHhhhhcccCCC----HHHHHHHHH-----HHHHHHhhccc
Confidence 000000 00 000000 00 0011111111000 000001111 01233456788
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHhCCC--eEEEEcCC-CccccccC-HHHHHHHHHHHHHhh
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPV--ARMIDLPG-GHLVSHER-TEEVNQALIDLIKAS 321 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~--~~l~~~~g-gH~~~~e~-p~~v~~~i~~fl~~~ 321 (405)
+++|+|+|+|++|.++|++.++.+++.+ ++ ++++++++ ||+++.|+ |+++++.|.+||++.
T Consensus 181 i~~P~Lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 181 IYAPTFVVQARHDEMINPDSANIIYNEI-ESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp CCSCEEEEEETTCSSSCTTHHHHHHHHC-CCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCCCCCCcchHHHHHHhc-CCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987 54 79999998 99999985 799999999999864
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-31 Score=239.93 Aligned_cols=258 Identities=12% Similarity=0.099 Sum_probs=168.1
Q ss_pred CcccccCCEEEEEEEccC---CCCeEEEEecCCCCCCc-hhh-----hHhhhcCCCCCCCCchhhhccccCCCCCCCCeE
Q 015550 17 DAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGP-----QLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~-~~~-----~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 87 (405)
.+++..+|.+++|...|+ ++|+|||+||++++... |.+ +++.|.+ +|+
T Consensus 13 ~~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-----------------------~~~ 69 (286)
T 2qmq_A 13 THSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-----------------------NFV 69 (286)
T ss_dssp EEEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-----------------------TSC
T ss_pred ccccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-----------------------CCC
Confidence 345778999999999997 46789999999999874 665 7788887 899
Q ss_pred EEEecCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 88 VCAFDNRGMGRSSVPVKKTE--YTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 88 Vi~~D~~G~G~S~~~~~~~~--~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
|+++|+||||.|........ ++++++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.....
T Consensus 70 vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 149 (286)
T 2qmq_A 70 RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAK 149 (286)
T ss_dssp EEEEECTTTSTTCCCCCTTCCCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCC
T ss_pred EEEecCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCccc
Confidence 99999999998865432222 5999999999999999999999999999999999999999999999999999864211
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc--hhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
..... .......... ..........+.... ......+.+...+...... .........
T Consensus 150 ----~~~~~----~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 209 (286)
T 2qmq_A 150 ----GWMDW----AAHKLTGLTS----------SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNL--ENIELYWNS 209 (286)
T ss_dssp ----CHHHH----HHHHHHHTTS----------CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTH--HHHHHHHHH
T ss_pred ----chhhh----hhhhhccccc----------cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCc--chHHHHHHH
Confidence 11110 0000000000 000001111110000 0000111111111100000 000000000
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC-CeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+............+..+++|+|+|+|++|.++| ...+.+.+.. + +++++++++ ||+++.++|+++++.|.+||+
T Consensus 210 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 210 YNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVECNSKLD-PTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp HHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHHSC-GGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred HhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHHHHHhc-CCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 000000011124567889999999999999998 4555555543 5 899999998 999999999999999999985
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=234.84 Aligned_cols=246 Identities=12% Similarity=0.100 Sum_probs=165.3
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
..+|+|||+||++++...|.++++.|.+ +||+|+++|+||||.|+.+.. ..++++++
T Consensus 10 ~~~~~vvllHG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~ 66 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWYKIVALMRS----------------------SGHNVTALDLGASGINPKQAL-QIPNFSDY 66 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHH
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHHh----------------------cCCeEEEeccccCCCCCCcCC-ccCCHHHH
Confidence 4567899999999999999999999987 489999999999999987643 34899999
Q ss_pred HHHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 114 AKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 114 ~~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++...... ....................
T Consensus 67 ~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 140 (267)
T 3sty_A 67 LSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPN------IDATTVCTKAGSAVLGQLDN 140 (267)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTT------BCHHHHHHHHHHTTTTCTTC
T ss_pred HHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCc------chHHHHHHHhcccchhhhhh
Confidence 999999999994 89999999999999999999999999999999998742211 11111111110000000000
Q ss_pred c---------cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc
Q 015550 193 A---------VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (405)
Q Consensus 193 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (405)
. ...............+........ ............ ...+ ..+.. ..........++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~-~~~~~-------~~~~~~~~~~~~P 208 (267)
T 3sty_A 141 CVTYENGPTNPPTTLIAGPKFLATNVYHLSPIED-LALATALVRPLY---LYLA-EDISK-------EVVLSSKRYGSVK 208 (267)
T ss_dssp EEECTTCTTSCCCEEECCHHHHHHHTSTTSCHHH-HHHHHHHCCCEE---CCCH-HHHHH-------HCCCCTTTGGGSC
T ss_pred hhhhhhhhhcccchhhhhHHHHHHhhcccCCHHH-HHHHHHhhccch---hHHH-HHhhc-------chhcccccccCCC
Confidence 0 000111223333333322221111 111111111100 0000 00000 0001111223699
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+++|+|++|.+++++..+.+++.+ ++++++++++ ||++++++|+++++.|.+|+++.
T Consensus 209 ~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 209 RVFIVATENDALKKEFLKLMIEKN-PPDEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHS-CCSEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCCccCHHHHHHHHHhC-CCceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 999999999999999999999987 8899999987 99999999999999999999874
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=234.80 Aligned_cols=272 Identities=19% Similarity=0.210 Sum_probs=164.1
Q ss_pred ccccc-CCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 18 AALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 18 ~~~~~-~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+++. +|.+++|...|+ ..++|||+||++++... ..+...+.. ++|+|+++|+||
T Consensus 17 ~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~~~-~~~~~~~~~----------------------~~~~vi~~D~~G 73 (317)
T 1wm1_A 17 GWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGIS-PHHRQLFDP----------------------ERYKVLLFDQRG 73 (317)
T ss_dssp EEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCC-GGGGGGSCT----------------------TTEEEEEECCTT
T ss_pred eEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcccc-hhhhhhccc----------------------cCCeEEEECCCC
Confidence 34555 799999999986 34579999999876532 223333433 399999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc-----
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK----- 170 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----- 170 (405)
||.|+.+.....++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++..........
T Consensus 74 ~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 153 (317)
T 1wm1_A 74 CGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDG 153 (317)
T ss_dssp STTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSS
T ss_pred CCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhcc
Confidence 999976543346789999999999999999999999999999999999999999999999999875311000000
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCch-hHHHHHHH---HhhhhhccccCc---cc---chhh
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR-RAILYQEY---VKGISATGMQSN---YG---FDGQ 240 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~---~~---~~~~ 240 (405)
...........+......... ......+.......... .......+ ............ +. +...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (317)
T 1wm1_A 154 ASRFFPEKWERVLSILSDDER------KDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALA 227 (317)
T ss_dssp GGGTSHHHHHHHHTTSCTTGG------GCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHH
T ss_pred chhhcHHHHHHHHhhccchhh------cchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhh
Confidence 000000000000000000000 00001111111111110 00000111 000000000000 00 0000
Q ss_pred h----HHhhh-cc-c-Chh-hhhhhhhcC-CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc-CHHH
Q 015550 241 I----HACWM-HK-M-TQK-DIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE-RTEE 309 (405)
Q Consensus 241 ~----~~~~~-~~-~-~~~-~~~~l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e-~p~~ 309 (405)
. ...+. .. . ... ..+.+.+++ +|+|+|+|++|.++|++.++.+++.+ ++++++++++ ||+++.+ .+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~-p~~~~~~i~~~gH~~~~~~~~~~ 306 (317)
T 1wm1_A 228 FARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSYDEPGILHQ 306 (317)
T ss_dssp HHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTTSHHHHHH
T ss_pred HHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC-CCceEEEECCCCCCCCCcchHHH
Confidence 0 00000 00 0 111 345566774 99999999999999999999999987 8999999998 9998765 5888
Q ss_pred HHHHHHHHHH
Q 015550 310 VNQALIDLIK 319 (405)
Q Consensus 310 v~~~i~~fl~ 319 (405)
+.+.|.+|+.
T Consensus 307 ~~~~i~~f~~ 316 (317)
T 1wm1_A 307 LMIATDRFAG 316 (317)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 9999998874
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=234.34 Aligned_cols=242 Identities=13% Similarity=0.171 Sum_probs=164.6
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
|+|||+||++++...|.++++.|.+ +||+|+++|+||||.|+.+.. ..++++++++|
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 61 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLES----------------------AGHRVTAVELAASGIDPRPIQ-AVETVDEYSKP 61 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSSCGG-GCCSHHHHHHH
T ss_pred CcEEEECCCCCccccHHHHHHHHHh----------------------CCCEEEEecCCCCcCCCCCCC-ccccHHHhHHH
Confidence 6799999999999999999999987 489999999999999987643 35899999999
Q ss_pred HHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc--
Q 015550 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA-- 193 (405)
Q Consensus 117 l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (405)
+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.......... .... .............
T Consensus 62 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~ 135 (258)
T 3dqz_A 62 LIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPS---HVLD---KYMEMPGGLGDCEFS 135 (258)
T ss_dssp HHHHHHTSCTTCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTT---HHHH---HHHTSTTCCTTCEEE
T ss_pred HHHHHHHhcccCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcch---HHHH---Hhcccchhhhhcccc
Confidence 9999999998 89999999999999999999999999999999986432221111 0111 1100000000000
Q ss_pred -------cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEE
Q 015550 194 -------VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (405)
Q Consensus 194 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlv 266 (405)
...............+........ ............. +...+.. ..........++|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~-------~~~~~~~~~~~~P~l~ 202 (258)
T 3dqz_A 136 SHETRNGTMSLLKMGPKFMKARLYQNCPIED-YELAKMLHRQGSF-----FTEDLSK-------KEKFSEEGYGSVQRVY 202 (258)
T ss_dssp EEEETTEEEEEEECCHHHHHHHTSTTSCHHH-HHHHHHHCCCEEC-----CHHHHHT-------SCCCCTTTGGGSCEEE
T ss_pred hhhhhccChhhhhhhHHHHHHHhhccCCHHH-HHHHHHhccCCch-----hhhhhhc-------cccccccccccCCEEE
Confidence 000111223333333222221111 1111111111000 1100000 0111112223699999
Q ss_pred EeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 267 i~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
|+|++|.++|++.++.+++.+ ++++++++++ ||+++.++|+++++.|.+|+++.
T Consensus 203 i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 203 VMSSEDKAIPCDFIRWMIDNF-NVSKVYEIDGGDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp EEETTCSSSCHHHHHHHHHHS-CCSCEEEETTCCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred EECCCCeeeCHHHHHHHHHhC-CcccEEEcCCCCCchhhcChHHHHHHHHHHHHHh
Confidence 999999999999999999987 8899999997 99999999999999999999863
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-31 Score=262.53 Aligned_cols=274 Identities=21% Similarity=0.292 Sum_probs=184.2
Q ss_pred cccc-CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 19 ALND-NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 19 ~~~~-~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
+++. +|.+++|...|++ |+|||+||++++...|.++++.|.+ +||+|+++|+||||
T Consensus 241 ~~~~~dg~~l~~~~~g~~-p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~D~~G~G 297 (555)
T 3i28_A 241 YVTVKPRVRLHFVELGSG-PAVCLCHGFPESWYSWRYQIPALAQ----------------------AGYRVLAMDMKGYG 297 (555)
T ss_dssp EEEEETTEEEEEEEECSS-SEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTST
T ss_pred EEEeCCCcEEEEEEcCCC-CEEEEEeCCCCchhHHHHHHHHHHh----------------------CCCEEEEecCCCCC
Confidence 3444 8999999999965 5799999999999999999999987 48999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHH-
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL- 176 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~- 176 (405)
.|+.+.....++.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|+++++...............
T Consensus 298 ~S~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 377 (555)
T 3i28_A 298 ESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKA 377 (555)
T ss_dssp TSCCCSCGGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHT
T ss_pred CCCCCCCcccccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhc
Confidence 9987765457899999999999999999999999999999999999999999999999999986533221110000000
Q ss_pred ---HHHHHHhhccChhhhhccCcccccCHhHHHhhh----------------------------CCCchhHHHHHHHHhh
Q 015550 177 ---SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYV----------------------------GSSTRRAILYQEYVKG 225 (405)
Q Consensus 177 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~ 225 (405)
.....+............ ......+...+ ............+...
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (555)
T 3i28_A 378 NPVFDYQLYFQEPGVAEAELE----QNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQ 453 (555)
T ss_dssp CGGGHHHHHHHSTTHHHHHHH----HCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHH
T ss_pred CCccchhHHhhCCCchHHHHh----hhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHH
Confidence 000000000000000000 00000000000 0001111222233332
Q ss_pred hhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Cccccc
Q 015550 226 ISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH 304 (405)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~ 304 (405)
+...+......+.......+ ..+....+.++++|+|+|+|++|.++|++.++.+++.+ ++++++++++ ||+++.
T Consensus 454 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~ 528 (555)
T 3i28_A 454 FKKSGFRGPLNWYRNMERNW----KWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQM 528 (555)
T ss_dssp HTTTTTHHHHHTTSCHHHHH----HHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCHHH
T ss_pred HhcccchhHHHHHHhccccc----hhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC-CCceEEEeCCCCCCcch
Confidence 22221111111111111100 11223455688999999999999999999999999876 8999999998 999999
Q ss_pred cCHHHHHHHHHHHHHhhcCC
Q 015550 305 ERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 305 e~p~~v~~~i~~fl~~~~~~ 324 (405)
++|+++++.|.+||++....
T Consensus 529 e~p~~~~~~i~~fl~~~~~~ 548 (555)
T 3i28_A 529 DKPTEVNQILIKWLDSDARN 548 (555)
T ss_dssp HSHHHHHHHHHHHHHHHTCC
T ss_pred hCHHHHHHHHHHHHHhccCC
Confidence 99999999999999987643
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-29 Score=237.70 Aligned_cols=273 Identities=16% Similarity=0.163 Sum_probs=171.8
Q ss_pred cccCCEEEEEEEccCC----CCeEEEEecCCCCCC-------------chhhhHh---hhcCCCCCCCCchhhhccccCC
Q 015550 20 LNDNGIKIFYRTYGRG----PTKVILITGLAGTHD-------------AWGPQLK---GLAGTDKPNDDDETILQDSVES 79 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~----~p~vvllHG~~~~~~-------------~~~~~~~---~L~~~~~~~~~~~~~~~~~~~~ 79 (405)
.+.+|.+++|...|+. .|+|||+||++++.. .|..++. .|..
T Consensus 26 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~------------------ 87 (366)
T 2pl5_A 26 SVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT------------------ 87 (366)
T ss_dssp CEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET------------------
T ss_pred ccccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccc------------------
Confidence 4578899999999973 578999999999988 7888875 3433
Q ss_pred CCCCCCeEEEEecCCC--CCCCCCCCCC-----------CCCCHHHHHHHHHHHHHHhCCccE-EEEEEChhHHHHHHHH
Q 015550 80 GDGGAGIEVCAFDNRG--MGRSSVPVKK-----------TEYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLA 145 (405)
Q Consensus 80 ~l~~~g~~Vi~~D~~G--~G~S~~~~~~-----------~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a 145 (405)
+||+|+++|+|| +|.|...... ..++++++++|+.+++++++.+++ +|+||||||.+|+.+|
T Consensus 88 ----~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a 163 (366)
T 2pl5_A 88 ----NQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWS 163 (366)
T ss_dssp ----TTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHH
T ss_pred ----cccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHH
Confidence 399999999999 8988643211 147999999999999999999998 8999999999999999
Q ss_pred HhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccC--c-------------ccccCHhHHHhhhC
Q 015550 146 AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD--L-------------DTHYSQEYLEEYVG 210 (405)
Q Consensus 146 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~ 210 (405)
.++|++|+++|++++..... .............+............ . ........+...+.
T Consensus 164 ~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T 2pl5_A 164 IAYPNSLSNCIVMASTAEHS----AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFG 239 (366)
T ss_dssp HHSTTSEEEEEEESCCSBCC----HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHT
T ss_pred HhCcHhhhheeEeccCccCC----CccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhh
Confidence 99999999999999874211 00100011111111110000000000 0 00000011111110
Q ss_pred CCchh------HHHHHHHHhhhhhccccCcc---cchhhhHHhhhcccC--hhhhhhhhhcCCcEEEEeecCCccCCHHH
Q 015550 211 SSTRR------AILYQEYVKGISATGMQSNY---GFDGQIHACWMHKMT--QKDIQTIRSAGFLVSVIHGRHDVIAQICY 279 (405)
Q Consensus 211 ~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~ 279 (405)
..... ......+...... ...... .+............. .+..+.+..+++|+|+|+|++|.++|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 318 (366)
T 2pl5_A 240 RNPPRGNILSTDFAVGSYLIYQGE-SFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ 318 (366)
T ss_dssp TSCCSSCTTTTTTTSCGGGGSTTC-CSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH
T ss_pred hhhhcccccchhhhHHHHHHHHHH-hhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHH
Confidence 00000 0000000000000 000000 000000111000000 12334678899999999999999999999
Q ss_pred HHHHHHHhCC----CeEEEEc-CC-CccccccCHHHHHHHHHHHHHh
Q 015550 280 ARRLAEKLYP----VARMIDL-PG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 280 ~~~l~~~l~~----~~~l~~~-~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
++++++.+ + +++++++ ++ ||+++.++|+++++.|.+||++
T Consensus 319 ~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 319 SREIVKSL-EAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp HHHHHHHH-HHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHh-hhcccCeEEEEeCCCCCcchhhcChhHHHHHHHHHHcc
Confidence 99999988 6 7999999 77 9999999999999999999975
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=244.59 Aligned_cols=273 Identities=16% Similarity=0.226 Sum_probs=168.9
Q ss_pred CEEEEEEEccC----CCCeEEEEecCCCCCCc-------------hhhhH---hhhcCCCCCCCCchhhhccccCCCCCC
Q 015550 24 GIKIFYRTYGR----GPTKVILITGLAGTHDA-------------WGPQL---KGLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 24 g~~i~y~~~G~----~~p~vvllHG~~~~~~~-------------~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
+.+|+|..+|+ +.|+|||+||++++... |..++ +.|..
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~---------------------- 83 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDT---------------------- 83 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEET----------------------
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCcccc----------------------
Confidence 88999999985 24689999999999877 88777 55654
Q ss_pred CCeEEEEecCCCCCCCCC-------CCC------------CCCCCHHHHHHHHHHHHHHhCCccEE-EEEEChhHHHHHH
Q 015550 84 AGIEVCAFDNRGMGRSSV-------PVK------------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACK 143 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~-------~~~------------~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~ 143 (405)
+||+|+++|+||||.|+. +.. ...++++++++|+.+++++++.++++ |+||||||.+|+.
T Consensus 84 ~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~ 163 (377)
T 3i1i_A 84 NQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQ 163 (377)
T ss_dssp TTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHH
T ss_pred ccEEEEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHH
Confidence 499999999999987441 110 01568999999999999999999996 9999999999999
Q ss_pred HHHhCCcccceEEE-eccCCCCCCCCccchhHHHHHHHHHhhcc-----------Chhh-h---hccCcccccCHhHHHh
Q 015550 144 LAAMVPERVLSLAL-LNVTGGGFQCCPKLDLQTLSIAIRFFRAK-----------TPEK-R---AAVDLDTHYSQEYLEE 207 (405)
Q Consensus 144 ~a~~~p~~v~~lvl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~---~~~~~~~~~~~~~~~~ 207 (405)
+|.++|++|+++|+ +++...... ............+... .+.. . .............+..
T Consensus 164 ~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 239 (377)
T 3i1i_A 164 WAVHYPHMVERMIGVITNPQNPII----TSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYET 239 (377)
T ss_dssp HHHHCTTTBSEEEEESCCSBCCHH----HHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHChHHHHHhcccCcCCCcCCc----hhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHH
Confidence 99999999999999 766532100 0000000000000000 0000 0 0000000111112211
Q ss_pred hhCCCchh---------HHHHHHHHhhhhhcccc-Cc-ccchhhhHHhhhccc---ChhhhhhhhhcCCcEEEEeecCCc
Q 015550 208 YVGSSTRR---------AILYQEYVKGISATGMQ-SN-YGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 208 ~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
.+...... ......+.......... .. ..+............ ..+..+.+.++++|+|+|+|++|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~ 319 (377)
T 3i1i_A 240 TYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDL 319 (377)
T ss_dssp HSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCS
T ss_pred HhhhhhccccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCcc
Confidence 11110000 00011111111110000 00 000000000000000 122345678899999999999999
Q ss_pred cCCHHHHHHHHHHhC---CCeEEEEcCC--CccccccCHHHHHHHHHHHHHhhc
Q 015550 274 IAQICYARRLAEKLY---PVARMIDLPG--GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~---~~~~l~~~~g--gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
++|++.++++++.+. ++++++++++ ||++++|+|+++++.|.+||++..
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 320 LQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp SSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred ccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence 999999999998762 7899999985 999999999999999999998753
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=234.69 Aligned_cols=122 Identities=25% Similarity=0.355 Sum_probs=101.1
Q ss_pred Cccccc-CCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 17 DAALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 17 ~~~~~~-~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..++.. +|.+++|...|+ +.++|||+||++++... ..+...+.. ++|+|+++|+|
T Consensus 13 ~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~~~-~~~~~~~~~----------------------~~~~vi~~D~~ 69 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCN-DKMRRFHDP----------------------AKYRIVLFDQR 69 (313)
T ss_dssp EEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCC-GGGGGGSCT----------------------TTEEEEEECCT
T ss_pred cceEEcCCCCEEEEEecCCCCCCeEEEECCCCCcccc-HHHHHhcCc----------------------CcceEEEECCC
Confidence 344555 799999999996 34579999998876532 233344433 39999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
|||.|+.+.....++++++++|+.++++++++++++|+||||||++|+.+|.++|++|+++|++++.
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 70 GSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp TSTTSBSTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCcCCCCCcccccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 9999986543346789999999999999999999999999999999999999999999999999875
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-30 Score=233.81 Aligned_cols=261 Identities=16% Similarity=0.164 Sum_probs=172.8
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+.+.+|.+|+|..+++ ++|+|||+||++++...|..+++.|.+ +||+|+++|+|
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~ 78 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLMG----------------------LDLLVFAHDHV 78 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHH----------------------TTEEEEEECCT
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhHHHHHHHHHHh----------------------CCCcEEEeCCC
Confidence 55678999999999875 346799999999999999999999987 49999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
|||.|..+.. ..++++++++|+.++++.+.. ++++++||||||.+++.+|.++|++|+++|++++..... +.
T Consensus 79 G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~---~~ 154 (303)
T 3pe6_A 79 GHGQSEGERM-VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLAN---PE 154 (303)
T ss_dssp TSTTSCSSTT-CCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBC---HH
T ss_pred CCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCc---hh
Confidence 9999986543 357889999999999998754 389999999999999999999999999999999864211 00
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
...................... ... ........ ......+.... .............. .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~ 217 (303)
T 3pe6_A 155 SATTFKVLAAKVLNSVLPNLSS-----GPI----DSSVLSRN---KTEVDIYNSDP----LICRAGLKVCFGIQ-LLNAV 217 (303)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCC-----CCC----CGGGTCSC---HHHHHHHHTCT----TSCCSCCCHHHHHH-HHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccC-----Ccc----chhhhhcc---hhHHHHhccCc----cccccchhhhhHHH-HHHHH
Confidence 0000001111111110000000 000 00011110 11111111110 00000000000000 00111
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC--CeEEEEcCC-CccccccCHHHHHHH---HHHHHHhhc
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP--VARMIDLPG-GHLVSHERTEEVNQA---LIDLIKASE 322 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~--~~~l~~~~g-gH~~~~e~p~~v~~~---i~~fl~~~~ 322 (405)
.+..+.+.++++|+++|+|++|.+++.+.++.+.+.+ + +++++++++ ||+++.++|+++.+. +.+||++..
T Consensus 218 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 218 SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELA-KSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHC-CCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhc-ccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 2333567788999999999999999999999999987 4 789999998 999999999866665 555655543
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=224.55 Aligned_cols=234 Identities=14% Similarity=0.201 Sum_probs=163.8
Q ss_pred CEEEEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 24 GIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 24 g~~i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
|.+|+|...|+ .+|+|||+||++++...|. ++..|.+ ||+|+++|+||+|.|+.
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~~~~-~~~~l~~-----------------------g~~v~~~d~~g~g~s~~ 57 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFG-ELEKYLE-----------------------DYNCILLDLKGHGESKG 57 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGGGGT-TGGGGCT-----------------------TSEEEEECCTTSTTCCS
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHHHHH-HHHHHHh-----------------------CCEEEEecCCCCCCCCC
Confidence 56789999887 4678999999999999999 8888875 99999999999999983
Q ss_pred CCCCCCCCHHHHHHHHHHHH------HHhCCccEEEEEEChhHHHHHHHHHh-CCcccceEEEeccCCCCCCCCccchhH
Q 015550 102 PVKKTEYTTKIMAKDVIALM------DHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l------~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
+ ..++.+++++|+.+++ ++++ +++++||||||.+|+.+|.+ +|+ |+++|++++...... ....
T Consensus 58 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~----~~~~ 127 (245)
T 3e0x_A 58 Q---CPSTVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDK----LDKD 127 (245)
T ss_dssp C---CCSSHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTT----SCHH
T ss_pred C---CCcCHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCcccc----ccHH
Confidence 3 3679999999999999 8888 99999999999999999999 999 999999998742211 1111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
.... +............. ...................... ....+......+..
T Consensus 128 ~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~ 181 (245)
T 3e0x_A 128 FMEK---IYHNQLDNNYLLEC-IGGIDNPLSEKYFETLEKDPDI----------------------MINDLIACKLIDLV 181 (245)
T ss_dssp HHHH---HHTTCCCHHHHHHH-HTCSCSHHHHHHHTTSCSSHHH----------------------HHHHHHHHHHCBCG
T ss_pred HHHH---HHHHHHHhhcCccc-ccccchHHHHHHHHHHhcCcHH----------------------HHHHHHHhccccHH
Confidence 1111 11100000000000 0000011111111000000000 00000000111223
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
..+..+++|+++++|++|.++|++..+++.+.+ ++++++++++ ||+++.++|+++.+.|.+||
T Consensus 182 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 182 DNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-SSEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc-CCceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 456788999999999999999999999999987 8899999997 99999999999999999885
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-29 Score=238.33 Aligned_cols=274 Identities=14% Similarity=0.104 Sum_probs=173.4
Q ss_pred cccCCEEEEEEEccCC----CCeEEEEecCCCCCCc---------hhhhHh---hhcCCCCCCCCchhhhccccCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRG----PTKVILITGLAGTHDA---------WGPQLK---GLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~----~p~vvllHG~~~~~~~---------~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
.+++|.+|+|...|+. .|+|||+||++++... |..++. .|..
T Consensus 39 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~---------------------- 96 (377)
T 2b61_A 39 GKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDT---------------------- 96 (377)
T ss_dssp CEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEET----------------------
T ss_pred ceecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCccccccc----------------------
Confidence 4568999999999972 5789999999999998 998885 3744
Q ss_pred CCeEEEEecCCC-CCCCCCCCCC------------CCCCHHHHHHHHHHHHHHhCCccEE-EEEEChhHHHHHHHHHhCC
Q 015550 84 AGIEVCAFDNRG-MGRSSVPVKK------------TEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 84 ~g~~Vi~~D~~G-~G~S~~~~~~------------~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p 149 (405)
+||+|+++|+|| +|.|+.+... ..++++++++|+.+++++++.++++ |+||||||.+|+.+|.++|
T Consensus 97 ~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 176 (377)
T 2b61_A 97 DRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYP 176 (377)
T ss_dssp TTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHST
T ss_pred CCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCc
Confidence 399999999999 7888765310 1479999999999999999999998 9999999999999999999
Q ss_pred cccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccC----------------cccccCHhHHHhhhCCCc
Q 015550 150 ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD----------------LDTHYSQEYLEEYVGSST 213 (405)
Q Consensus 150 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 213 (405)
++|+++|++++...... ............+............ .........+...+....
T Consensus 177 ~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (377)
T 2b61_A 177 DFMDNIVNLCSSIYFSA----EAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRAT 252 (377)
T ss_dssp TSEEEEEEESCCSSCCH----HHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCB
T ss_pred hhhheeEEeccCccccc----cchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhcccc
Confidence 99999999998742110 0000000000111000000000000 000000111111111000
Q ss_pred hh-------HHHHHHHHhhhhhc--cccCcccchhhhHHhhhccc---ChhhhhhhhhcCCcEEEEeecCCccCCH----
Q 015550 214 RR-------AILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQI---- 277 (405)
Q Consensus 214 ~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlvi~G~~D~~~~~---- 277 (405)
.. ....+.+....... .......+............ ..+....+..+++|+|+|+|++|.++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~ 332 (377)
T 2b61_A 253 KSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLY 332 (377)
T ss_dssp CTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHH
T ss_pred ccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchH
Confidence 00 00011111100000 00000000011111110000 1123456788999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEcC-C-CccccccCHHHHHHHHHHHHHh
Q 015550 278 CYARRLAEKLYPVARMIDLP-G-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 278 ~~~~~l~~~l~~~~~l~~~~-g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+.++.+.+.+ +++++++++ + ||+++.++|+++++.|.+||++
T Consensus 333 ~~~~~l~~~~-~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 333 KSKQLLEQSG-VDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHHHHHHTT-CEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcC-CCceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 8888888876 899999999 7 9999999999999999999975
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-29 Score=235.15 Aligned_cols=263 Identities=15% Similarity=0.127 Sum_probs=176.2
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+.+.+|.+|+|..+++ +.|+|||+||++++...|..+++.|.+ +||+|+++|+|
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~ 96 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMG----------------------LDLLVFAHDHV 96 (342)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHT----------------------TTEEEEEECCT
T ss_pred eEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccchHHHHHHHHHh----------------------CCCeEEEEcCC
Confidence 45677999999999865 345799999999999999999999988 49999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc----cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK----QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~----~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
|+|.|..+.. ..++++++++|+.++++.+..+ +++|+||||||.+++.+|.++|++|+++|++++..........
T Consensus 97 G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 175 (342)
T 3hju_A 97 GHGQSEGERM-VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESAT 175 (342)
T ss_dssp TSTTSCSSTT-CCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTS
T ss_pred CCcCCCCcCC-CcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhh
Confidence 9999986543 4678899999999999987543 8999999999999999999999999999999987543322222
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
................. ... ... ...... .......+.... ............... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~---~~~-----~~~----~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~ 235 (342)
T 3hju_A 176 TFKVLAAKVLNLVLPNL---SLG-----PID----SSVLSR---NKTEVDIYNSDP----LICRAGLKVCFGIQL-LNAV 235 (342)
T ss_dssp HHHHHHHHHHHHHCTTC---BCC-----CCC----GGGSCS---CHHHHHHHHTCT----TCCCSCCBHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHhcccc---ccC-----ccc----cccccc---chHHHHHHhcCc----ccccccccHHHHHHH-HHHH
Confidence 11111111111111100 000 000 000000 011111111100 000000000000000 0011
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHHHHHH---HHHHHHhhcC
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQA---LIDLIKASEK 323 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~v~~~---i~~fl~~~~~ 323 (405)
.+..+.+.++++|+|+|+|++|.+++++.++.+.+.+. ++++++++++ ||+++.++|+++.+. +.+||++...
T Consensus 236 ~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (342)
T 3hju_A 236 SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTA 313 (342)
T ss_dssp HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccC
Confidence 23335677889999999999999999999999999872 2799999998 999999999866655 6667766543
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=240.07 Aligned_cols=281 Identities=15% Similarity=0.124 Sum_probs=180.3
Q ss_pred CCcccccCCEEEEEEEccCC--------C--CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRG--------P--TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~--------~--p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g 85 (405)
...++..+|.+|+|..+|+. . |+|||+||++++...|.+++..|.+.. .+.|
T Consensus 22 ~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~------------------~~~G 83 (398)
T 2y6u_A 22 QSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAAD------------------AEGN 83 (398)
T ss_dssp TSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCB------------------TTTT
T ss_pred CccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhh------------------hhcC
Confidence 34556789999999999852 2 589999999999999999999998310 0138
Q ss_pred e---EEEEecCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHhC----Ccc--EEEEEEChhHHHHHHHHHhCCcccc
Q 015550 86 I---EVCAFDNRGMGRSSVPVK---KTEYTTKIMAKDVIALMDHLG----WKQ--AHVFGHSMGAMIACKLAAMVPERVL 153 (405)
Q Consensus 86 ~---~Vi~~D~~G~G~S~~~~~---~~~~~~~~~~~dl~~~l~~l~----~~~--v~lvGhS~Gg~ia~~~a~~~p~~v~ 153 (405)
| +|+++|+||||.|+.+.. ...++++++++|+.++++.+. ..+ ++|+||||||.+|+.+|.++|++|+
T Consensus 84 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 163 (398)
T 2y6u_A 84 YAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFH 163 (398)
T ss_dssp EEEEEEEEECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCS
T ss_pred cceeEEEEEcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchhee
Confidence 9 999999999999975432 236799999999999999854 344 9999999999999999999999999
Q ss_pred eEEEeccCCCCCC-------CCcc----chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHH
Q 015550 154 SLALLNVTGGGFQ-------CCPK----LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEY 222 (405)
Q Consensus 154 ~lvl~~~~~~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (405)
++|++++...... ..+. ..................... ....++..............+.+
T Consensus 164 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 235 (398)
T 2y6u_A 164 LLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANES--------EYVKYMRNGSFFTNAHSQILQNI 235 (398)
T ss_dssp EEEEESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHH--------HHHHHHHHTSTTTTSCHHHHHHH
T ss_pred EEEEeccccccccccccccccccccccccchhhHHHhhhhccccCCCHH--------HHHHHhhcCcccccCCHHHHHHH
Confidence 9999998754311 0010 011111111110000000000 00001110000000111122222
Q ss_pred Hhhhhh--------cc-ccCcccchhhhHHhhhc-ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeE
Q 015550 223 VKGISA--------TG-MQSNYGFDGQIHACWMH-KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR 292 (405)
Q Consensus 223 ~~~~~~--------~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~ 292 (405)
...... .+ ..........+..+... ....+....+..+++|+|+|+|++|.++|++.++.+.+.+ ++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~-~~~~ 314 (398)
T 2y6u_A 236 IDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL-QNYH 314 (398)
T ss_dssp HHHHEEC--------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC-SSEE
T ss_pred HHhcCccccccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC-CCce
Confidence 211000 00 00000000000000000 0112234567888999999999999999999999999987 8999
Q ss_pred EEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 293 MIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 293 l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
++++++ ||+++.++|+++++.|.+||++...
T Consensus 315 ~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 346 (398)
T 2y6u_A 315 LDVIPGGSHLVNVEAPDLVIERINHHIHEFVL 346 (398)
T ss_dssp EEEETTCCTTHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCccchhcCHHHHHHHHHHHHHHHHH
Confidence 999998 9999999999999999999987654
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-29 Score=232.74 Aligned_cols=261 Identities=17% Similarity=0.216 Sum_probs=160.7
Q ss_pred ccccCC----EEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 19 ALNDNG----IKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 19 ~~~~~g----~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+.+++ .+++|...|.+.|+|||+||++++...|.++++.|.+. .+|+|+++|+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~~~p~lvllHG~~~~~~~w~~~~~~L~~~---------------------~~~~via~Dl~ 75 (316)
T 3c5v_A 17 DVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISR---------------------VQCRIVALDLR 75 (316)
T ss_dssp EEEEEETTEEEEEEEEEECSSSCEEEEECCTTCCGGGGHHHHHHHHTT---------------------BCCEEEEECCT
T ss_pred eEEecCCcceEEEEEEecCCCCcEEEEECCCCcccccHHHHHHHHhhc---------------------CCeEEEEecCC
Confidence 344555 57898888866678999999999999999999999751 18999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CC-ccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccCCCCCCCCc
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHL--GW-KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l--~~-~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~ 169 (405)
|||.|+.+.. ..++++++++|+.++++++ +. ++++|+||||||++|+.+|.+ +|+ |+++|++++..
T Consensus 76 GhG~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~------- 146 (316)
T 3c5v_A 76 SHGETKVKNP-EDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVE------- 146 (316)
T ss_dssp TSTTCBCSCT-TCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCH-------
T ss_pred CCCCCCCCCc-cccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccc-------
Confidence 9999986543 3689999999999999999 66 789999999999999999996 576 99999998641
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhC---CCchh--HHHHHHHHhhhh---------h-ccccCc
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG---SSTRR--AILYQEYVKGIS---------A-TGMQSN 234 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~---------~-~~~~~~ 234 (405)
................... ... ........... ..... ............ . ......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (316)
T 3c5v_A 147 GTAMDALNSMQNFLRGRPK------TFK--SLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWR 218 (316)
T ss_dssp HHHHHHHHHHHHHHHHSCS------CBS--SHHHHHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEES
T ss_pred cchhhhHHHHHHHHhhCcc------ccc--cHHHHHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeee
Confidence 1100001111111110000 000 00000000000 00000 000000000000 0 000000
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
.... .....+... .......+..+++|+|+|+|++|.+.+.... .+ +.++++++++++ ||+++.|+|+++++.
T Consensus 219 ~~~~-~~~~~~~~~-~~~~~~~~~~i~~P~Lli~g~~D~~~~~~~~---~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 292 (316)
T 3c5v_A 219 IELA-KTEKYWDGW-FRGLSNLFLSCPIPKLLLLAGVDRLDKDLTI---GQ-MQGKFQMQVLPQCGHAVHEDAPDKVAEA 292 (316)
T ss_dssp CCGG-GGHHHHHHH-HTTHHHHHHHSSSCEEEEESSCCCCCHHHHH---HH-HTTCSEEEECCCCSSCHHHHSHHHHHHH
T ss_pred eccc-chhhhhhhh-hhhhHHHhhcCCCCEEEEEecccccccHHHH---Hh-hCCceeEEEcCCCCCcccccCHHHHHHH
Confidence 0000 000001000 0011234457899999999999987543222 22 347789999998 999999999999999
Q ss_pred HHHHHHhhcC
Q 015550 314 LIDLIKASEK 323 (405)
Q Consensus 314 i~~fl~~~~~ 323 (405)
|.+||.+...
T Consensus 293 i~~fl~~~~~ 302 (316)
T 3c5v_A 293 VATFLIRHRF 302 (316)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHhccc
Confidence 9999987544
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-29 Score=244.30 Aligned_cols=273 Identities=16% Similarity=0.152 Sum_probs=171.2
Q ss_pred ccCCEEEEEEEccCC----CCeEEEEecCCCCCCc---hhhhHh---hhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 21 NDNGIKIFYRTYGRG----PTKVILITGLAGTHDA---WGPQLK---GLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~----~p~vvllHG~~~~~~~---~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
+.+|.+++|..+|+. .|+|||+||++++... |.+++. .|.. +||+|++
T Consensus 90 ~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~----------------------~~~~Vi~ 147 (444)
T 2vat_A 90 ILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDT----------------------SRYFIIC 147 (444)
T ss_dssp EEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCT----------------------TTCEEEE
T ss_pred EecceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhc----------------------cCCEEEE
Confidence 468889999999972 4789999999999998 888875 4633 3999999
Q ss_pred ecCCC--CCCCCCCC-----CC--------CCCCHHHHHHHHHHHHHHhCCcc-EEEEEEChhHHHHHHHHHhCCcccce
Q 015550 91 FDNRG--MGRSSVPV-----KK--------TEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLS 154 (405)
Q Consensus 91 ~D~~G--~G~S~~~~-----~~--------~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~ 154 (405)
+|+|| +|.|.... .. ..++++++++|+.+++++++.++ ++|+||||||++|+.+|.++|++|++
T Consensus 148 ~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~ 227 (444)
T 2vat_A 148 LNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRK 227 (444)
T ss_dssp ECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCC
T ss_pred ecCCCCCCCCCCCCCCCcccccccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhhe
Confidence 99999 68886321 00 13799999999999999999999 99999999999999999999999999
Q ss_pred EEEeccCCCCCCCCccchhHHHHHHHH-HhhccC------------hhh-h---hccCcccccCHhHHHhhhCCCch---
Q 015550 155 LALLNVTGGGFQCCPKLDLQTLSIAIR-FFRAKT------------PEK-R---AAVDLDTHYSQEYLEEYVGSSTR--- 214 (405)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~-~---~~~~~~~~~~~~~~~~~~~~~~~--- 214 (405)
+|++++...... . ...+....+ .+.... +.. . ...........+.+...+.....
T Consensus 228 lVli~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (444)
T 2vat_A 228 IVPIATSCRQSG----W-CAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQA 302 (444)
T ss_dssp EEEESCCSBCCH----H-HHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-
T ss_pred EEEEeccccCCc----c-chhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccc
Confidence 999998742210 0 000000000 000000 000 0 00000000000001111100000
Q ss_pred --------------------------hHHHHHHHHhhhhhcc--ccCcccchhhhHHhhhccc----ChhhhhhhhhcCC
Q 015550 215 --------------------------RAILYQEYVKGISATG--MQSNYGFDGQIHACWMHKM----TQKDIQTIRSAGF 262 (405)
Q Consensus 215 --------------------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~ 262 (405)
.....+.+........ ......+............ ..+..+.+.++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~ 382 (444)
T 2vat_A 303 GRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQ 382 (444)
T ss_dssp --------------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCS
T ss_pred cccccccccccccccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCC
Confidence 0000011110000000 0000000000111100000 0114566788999
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcC-C-CccccccCHHHHHHHHHHHHHhh
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~-g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
|+|+|+|++|.++|++.++++++.+ +++++++++ + ||++++|+|+++++.|.+||++.
T Consensus 383 PvLvi~G~~D~~~p~~~~~~l~~~~-p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 383 PALIICARSDGLYSFDEHVEMGRSI-PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp CEEEEECTTCSSSCHHHHHHHHHHS-TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHHC-CCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999987 899999999 7 99999999999999999999653
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-30 Score=234.06 Aligned_cols=259 Identities=14% Similarity=0.143 Sum_probs=166.3
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecC--CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..++.+++..++|. .++++|+|||+||+ +++...|.++++.|.+ +|+|+++|+|
T Consensus 23 ~~~v~~~~~~~~~~-~~~~~p~vv~lHG~G~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~ 78 (292)
T 3l80_A 23 KEMVNTLLGPIYTC-HREGNPCFVFLSGAGFFSTADNFANIIDKLPD-----------------------SIGILTIDAP 78 (292)
T ss_dssp EEEECCTTSCEEEE-EECCSSEEEEECCSSSCCHHHHTHHHHTTSCT-----------------------TSEEEEECCT
T ss_pred cceEEecCceEEEe-cCCCCCEEEEEcCCCCCcHHHHHHHHHHHHhh-----------------------cCeEEEEcCC
Confidence 35567777788887 44567889999955 5567789999999986 9999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC--CCcc-c
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ--CCPK-L 171 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~-~ 171 (405)
|||.|+.+.. ..++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... .... .
T Consensus 79 G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 157 (292)
T 3l80_A 79 NSGYSPVSNQ-ANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDL 157 (292)
T ss_dssp TSTTSCCCCC-TTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSS
T ss_pred CCCCCCCCCc-ccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhcccccc
Confidence 9999984332 4789999999999999999999999999999999999999999999999999996531100 0000 0
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCch--hHHHHHHHHhhhhhccc-cCcccchhhhHHhhhcc
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGM-QSNYGFDGQIHACWMHK 248 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (405)
... ............+.. .+........+..... ...........+..... .. .... ...
T Consensus 158 ~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~~ 220 (292)
T 3l80_A 158 YPQ-LALRRQKLKTAADRL--------NYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPD-FKIR-------LAL 220 (292)
T ss_dssp SHH-HHHHHHTCCSHHHHH--------HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTT-CCSS-------CCC
T ss_pred chh-HHHHHHHHhccCchh--------hhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccc-cchh-------hhh
Confidence 000 000000000000000 0000011111111000 00111111111111110 00 0000 000
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
...+..+.+.. ++|+|+|+|++|.+++++ + .+.+.+ ++.+ +++++ ||+++.|+|+++++.|.+||++.+
T Consensus 221 ~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~-~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 221 GEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKH-TQTK-LILCGQHHYLHWSETNSILEKVEQLLSNHE 290 (292)
T ss_dssp CGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCC-TTCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTCT
T ss_pred cchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccC-CCce-eeeCCCCCcchhhCHHHHHHHHHHHHHhcc
Confidence 11111234556 899999999999999988 6 666655 7888 78887 999999999999999999998654
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-32 Score=250.72 Aligned_cols=280 Identities=20% Similarity=0.246 Sum_probs=174.0
Q ss_pred CCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+.++++.+|.+++|...|++ |+|||+||++++...|.++++.|.+ ||+|+++|+||
T Consensus 6 ~~~~~~~~g~~~~~~~~g~~-p~vv~lHG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~D~~G 61 (304)
T 3b12_A 6 ERRLVDVGDVTINCVVGGSG-PALLLLHGFPQNLHMWARVAPLLAN-----------------------EYTVVCADLRG 61 (304)
Confidence 44567889999999999965 4699999999999999999999886 99999999999
Q ss_pred CCCCCCCCC---CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 96 MGRSSVPVK---KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 96 ~G~S~~~~~---~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
||.|+.+.. ...++.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... ..
T Consensus 62 ~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~ 140 (304)
T 3b12_A 62 YGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEE-VD 140 (304)
Confidence 999987632 24789999999999999999999999999999999999999999999999999998743211100 00
Q ss_pred hHHHHHHHHHhhccCh--h-hhhccCcccccCHh-HHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 173 LQTLSIAIRFFRAKTP--E-KRAAVDLDTHYSQE-YLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
.........+.....+ . ..........+... ++....... .........+...+...... .............
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 218 (304)
T 3b12_A 141 RFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAI--HGSCCDYRAGGTI 218 (304)
Confidence 0000000000000000 0 00000000000000 111000000 00111111111111110000 0000000000000
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccC-CHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhcC
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIA-QICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~-~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
.........+.++++|+|+|+|++|.++ +....+.+.+.. ++++++++++||+++.++|+++++.|.+||++...
T Consensus 219 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 219 DFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRL-ANMRFASLPGGHFFVDRFPDDTARILREFLSDARS 294 (304)
Confidence 1111111226788999999999999544 556666666654 78888888339999999999999999999988754
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=227.19 Aligned_cols=234 Identities=15% Similarity=0.156 Sum_probs=145.2
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
+|+|||+||++++...|.++++.|.+ ++|+|+++|+||||.|+.+. .++++++++
T Consensus 16 ~~~vvllHG~~~~~~~w~~~~~~L~~----------------------~~~~vi~~Dl~GhG~S~~~~---~~~~~~~a~ 70 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGADWQPVLSHLAR----------------------TQCAALTLDLPGHGTNPERH---CDNFAEAVE 70 (264)
T ss_dssp BCEEEEECCTTCCGGGGHHHHHHHTT----------------------SSCEEEEECCTTCSSCC----------CHHHH
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHhcc----------------------cCceEEEecCCCCCCCCCCC---ccCHHHHHH
Confidence 37899999999999999999999983 29999999999999997643 467899999
Q ss_pred HHHHHHHHhCCcc--EEEEEEChhHHHHHH---HHHhCCcccceEEEeccCCCCCCCCccchhHHHH---HHHHHhhccC
Q 015550 116 DVIALMDHLGWKQ--AHVFGHSMGAMIACK---LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS---IAIRFFRAKT 187 (405)
Q Consensus 116 dl~~~l~~l~~~~--v~lvGhS~Gg~ia~~---~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 187 (405)
|+.+++++++.++ ++|+||||||.+|+. +|.++|++|+++|++++...... +........ .....+....
T Consensus 71 ~l~~~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
T 1r3d_A 71 MIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQE--NEEKAARWQHDQQWAQRFSQQP 148 (264)
T ss_dssp HHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCS--HHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCC--hhhhhhhhcccHHHHHHhcccc
Confidence 9999999998876 999999999999999 88899999999999987532110 000000000 0000000000
Q ss_pred hhhhhccCcccccCHhHHH-hhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc---ccChhhhhhhhhcCCc
Q 015550 188 PEKRAAVDLDTHYSQEYLE-EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH---KMTQKDIQTIRSAGFL 263 (405)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~P 263 (405)
..... ..+.. ..+.... ......+....... ........+.. ....+..+.+.++++|
T Consensus 149 ~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 210 (264)
T 1r3d_A 149 IEHVL---------SDWYQQAVFSSLN--HEQRQTLIAQRSAN-------LGSSVAHMLLATSLAKQPYLLPALQALKLP 210 (264)
T ss_dssp HHHHH---------HHHTTSGGGTTCC--HHHHHHHHHHHTTS-------CHHHHHHHHHHTCGGGCCCCHHHHHTCSSC
T ss_pred HHHHH---------HHHhhhhhhhccC--HHHHHHHHHHHhhc-------chHHHHHHHHhhhhccCccHHHHHHhcCCC
Confidence 00000 00000 0000000 00111111110000 00000000000 0012234567788999
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+|+|+|++|..++ .+.+.+ + .+++++++ ||++++|+|+++++.|.+|+++.
T Consensus 211 ~lii~G~~D~~~~-----~~~~~~-~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 211 IHYVCGEQDSKFQ-----QLAESS-G-LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp EEEEEETTCHHHH-----HHHHHH-C-SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCchHH-----HHHHHh-C-CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999999998542 344545 3 67999998 99999999999999999999865
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=228.51 Aligned_cols=233 Identities=15% Similarity=0.205 Sum_probs=170.6
Q ss_pred CcccccCCEEEEEEEccC---CCCeEEEEecCCCC--CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 17 DAALNDNGIKIFYRTYGR---GPTKVILITGLAGT--HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~--~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..+++.+|.+++|..+++ +.|+|||+||++++ ...|..+++.|.+ +||.|+++
T Consensus 24 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~ 81 (270)
T 3pfb_A 24 TITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRD----------------------ENIASVRF 81 (270)
T ss_dssp EEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHH----------------------TTCEEEEE
T ss_pred EEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHh----------------------CCcEEEEE
Confidence 445788999999999885 34689999999988 4558899999987 49999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
|+||+|.|..+.. .++++++++|+.++++.+ +.++++++||||||.+|+.+|..+|++|+++|++++..
T Consensus 82 d~~G~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~----- 154 (270)
T 3pfb_A 82 DFNGHGDSDGKFE--NMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAA----- 154 (270)
T ss_dssp CCTTSTTSSSCGG--GCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCT-----
T ss_pred ccccccCCCCCCC--ccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEecccc-----
Confidence 9999999987543 678999999999999998 77899999999999999999999999999999999863
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhC--CCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG--SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
...... ...... ...+.......... ...........
T Consensus 155 --~~~~~~------~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 193 (270)
T 3pfb_A 155 --TLKGDA------LEGNTQ---------GVTYNPDHIPDRLPFKDLTLGGFYLRI------------------------ 193 (270)
T ss_dssp --HHHHHH------HHTEET---------TEECCTTSCCSEEEETTEEEEHHHHHH------------------------
T ss_pred --ccchhh------hhhhhh---------ccccCcccccccccccccccchhHhhc------------------------
Confidence 111000 000000 00000000000000 00000000000
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
....+..+.+..+++|+++++|++|.++|++.++.+.+.+ ++++++++++ ||.++.++++++.+.|.+||++..
T Consensus 194 --~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 194 --AQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIY-QNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp --HHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEETTCCTTCCTHHHHHHHHHHHHHHC---
T ss_pred --ccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhC-CCCeEEEcCCCCcccCccchHHHHHHHHHHHhhcC
Confidence 0011233456788999999999999999999999999986 8999999998 999999999999999999997643
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=222.58 Aligned_cols=240 Identities=17% Similarity=0.152 Sum_probs=165.2
Q ss_pred CCccccc----CCEEEEEEEccCC---CCeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCe
Q 015550 16 PDAALND----NGIKIFYRTYGRG---PTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (405)
Q Consensus 16 ~~~~~~~----~g~~i~y~~~G~~---~p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~ 86 (405)
+.+++++ +|.+++|...+.. +|+|||+||++++...|.. +...|.+ +||
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~g~ 67 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAAS----------------------LGV 67 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHH----------------------HTC
T ss_pred CcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHh----------------------CCC
Confidence 3445666 9999999966543 6889999999999777543 6666755 399
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh---CC---cccceEEEecc
Q 015550 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---VP---ERVLSLALLNV 160 (405)
Q Consensus 87 ~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~---~p---~~v~~lvl~~~ 160 (405)
+|+++|+||+|.|..... .++++++++|+.++++.++.++++++||||||.+|+.+|.+ +| ++|+++|++++
T Consensus 68 ~v~~~d~~G~G~s~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~ 145 (270)
T 3llc_A 68 GAIRFDYSGHGASGGAFR--DGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAP 145 (270)
T ss_dssp EEEEECCTTSTTCCSCGG--GCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESC
T ss_pred cEEEeccccCCCCCCccc--cccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecC
Confidence 999999999999986553 67999999999999999999999999999999999999999 99 99999999998
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
.... .... .... ......... ......................
T Consensus 146 ~~~~-------~~~~------~~~~--------------~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
T 3llc_A 146 APDF-------TSDL------IEPL--------------LGDRERAEL----------AENGYFEEVSEYSPEPNIFTRA 188 (270)
T ss_dssp CTTH-------HHHT------TGGG--------------CCHHHHHHH----------HHHSEEEECCTTCSSCEEEEHH
T ss_pred cccc-------hhhh------hhhh--------------hhhhhhhhh----------hccCcccChhhcccchhHHHHH
Confidence 6310 0000 0000 000000000 0000000000000000000000
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC--eEEEEcCC-Ccccc-ccCHHHHHHHHHH
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV--ARMIDLPG-GHLVS-HERTEEVNQALID 316 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~--~~l~~~~g-gH~~~-~e~p~~v~~~i~~ 316 (405)
+ +...........+..+++|+++++|++|.++|.+.++.+.+.+ ++ ++++++++ ||++. .+.++++.+.|.+
T Consensus 189 ~---~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 264 (270)
T 3llc_A 189 L---MEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHL-PADDVVLTLVRDGDHRLSRPQDIDRMRNAIRA 264 (270)
T ss_dssp H---HHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTS-CSSSEEEEEETTCCSSCCSHHHHHHHHHHHHH
T ss_pred H---HhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhc-CCCCeeEEEeCCCcccccccccHHHHHHHHHH
Confidence 0 0000001112445678899999999999999999999999987 65 99999997 99655 4678999999999
Q ss_pred HHHh
Q 015550 317 LIKA 320 (405)
Q Consensus 317 fl~~ 320 (405)
||++
T Consensus 265 fl~~ 268 (270)
T 3llc_A 265 MIEP 268 (270)
T ss_dssp HHC-
T ss_pred HhcC
Confidence 9964
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=211.90 Aligned_cols=191 Identities=20% Similarity=0.277 Sum_probs=166.8
Q ss_pred CcccccCCEEEE---EEEccCCCCeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 17 DAALNDNGIKIF---YRTYGRGPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 17 ~~~~~~~g~~i~---y~~~G~~~p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..+++.+|.+++ |...| ..|+||++||++++...|.. +++.|.+ +||.|+++
T Consensus 6 ~~~~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~ 62 (207)
T 3bdi_A 6 EEFIDVNGTRVFQRKMVTDS-NRRSIALFHGYSFTSMDWDKADLFNNYSK----------------------IGYNVYAP 62 (207)
T ss_dssp EEEEEETTEEEEEEEECCTT-CCEEEEEECCTTCCGGGGGGGTHHHHHHT----------------------TTEEEEEE
T ss_pred eEEEeeCCcEEEEEEEeccC-CCCeEEEECCCCCCccccchHHHHHHHHh----------------------CCCeEEEE
Confidence 455788999999 77766 45689999999999999999 9999988 48999999
Q ss_pred cCCCCCCC---CCCCCCCCC-CHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 92 DNRGMGRS---SVPVKKTEY-TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 92 D~~G~G~S---~~~~~~~~~-~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
|+||+|.| ..+.. .+ +.+++++++.++++.++.++++++|||+||.+++.+|.++|++++++|++++...
T Consensus 63 d~~g~g~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~---- 136 (207)
T 3bdi_A 63 DYPGFGRSASSEKYGI--DRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWV---- 136 (207)
T ss_dssp CCTTSTTSCCCTTTCC--TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSC----
T ss_pred cCCcccccCcccCCCC--CcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccc----
Confidence 99999999 65543 66 8999999999999999999999999999999999999999999999999998621
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
...
T Consensus 137 -~~~---------------------------------------------------------------------------- 139 (207)
T 3bdi_A 137 -ESL---------------------------------------------------------------------------- 139 (207)
T ss_dssp -GGG----------------------------------------------------------------------------
T ss_pred -cch----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
...+.++++|+++++|++|.+++++..+.+.+.+ ++++++++++ ||..+.++++++.+.|.+||++
T Consensus 140 ------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 140 ------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp ------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred ------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhc-CCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 1223556799999999999999999999999987 8899999998 9999999999999999999975
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=225.64 Aligned_cols=228 Identities=14% Similarity=0.186 Sum_probs=149.3
Q ss_pred ccCCEEEEEEEccC------CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 21 NDNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 21 ~~~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..+|.+|+|...++ .+|+|||+||++++...|.++++.|.+ +||+|+++|+|
T Consensus 14 ~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~----------------------~G~~Vi~~D~r 71 (305)
T 1tht_A 14 VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST----------------------NGFHVFRYDSL 71 (305)
T ss_dssp ETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHT----------------------TTCCEEEECCC
T ss_pred cCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHH----------------------CCCEEEEeeCC
Confidence 34889999988874 246899999999999999999999987 49999999999
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 95 GM-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 95 G~-G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
|| |.|+.+.. .++++++++|+.++++.+ +.++++|+||||||.+|+.+|.+ | +|+++|++++.. .
T Consensus 72 Gh~G~S~~~~~--~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~-------~ 140 (305)
T 1tht_A 72 HHVGLSSGSID--EFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVV-------N 140 (305)
T ss_dssp BCC----------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCS-------C
T ss_pred CCCCCCCCccc--ceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCch-------h
Confidence 99 99976543 688999999998888865 78899999999999999999998 7 899999987642 1
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
.. ... ......... ........ ..+. ................. .. + ...
T Consensus 141 ~~-~~~---~~~~~~~~~-~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~----~~--------------~--~~~ 189 (305)
T 1tht_A 141 LR-DTL---EKALGFDYL-SLPIDELP-----NDLD-FEGHKLGSEVFVRDCFE----HH--------------W--DTL 189 (305)
T ss_dssp HH-HHH---HHHHSSCGG-GSCGGGCC-----SEEE-ETTEEEEHHHHHHHHHH----TT--------------C--SSH
T ss_pred HH-HHH---HHHhhhhhh-hcchhhCc-----cccc-ccccccCHHHHHHHHHh----cc--------------c--cch
Confidence 10 000 011100000 00000000 0000 00000000000000000 00 0 000
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHHHHHH
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
.+..+.+..+++|+|+|+|++|.++|++.++.+++.+. ++++++++++ ||.++ ++|+.+.+.
T Consensus 190 ~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~~f 253 (305)
T 1tht_A 190 DSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNF 253 (305)
T ss_dssp HHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHH
T ss_pred hhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHHHH
Confidence 12235677899999999999999999999999998763 5789999998 99986 888754433
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=216.14 Aligned_cols=230 Identities=18% Similarity=0.204 Sum_probs=159.6
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
.++|+|||+||++++...|.++++.|.+ +|+|+++|+||||.|..+.. .++++++
T Consensus 18 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~~--~~~~~~~ 72 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFFFPLAKALAP-----------------------AVEVLAVQYPGRQDRRHEPP--VDSIGGL 72 (267)
T ss_dssp TCSEEEEEECCTTCCGGGGHHHHHHHTT-----------------------TEEEEEECCTTSGGGTTSCC--CCSHHHH
T ss_pred CCCceEEEeCCCCCCchhHHHHHHHhcc-----------------------CcEEEEecCCCCCCCCCCCC--CcCHHHH
Confidence 4567899999999999999999999987 79999999999999986553 6799999
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChh
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (405)
++|+.+++++++.++++|+||||||.+|+.+|..+|++ ++++|++++..+...................+......
T Consensus 73 ~~~~~~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
T 3fla_A 73 TNRLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGS 152 (267)
T ss_dssp HHHHHHHTGGGTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCc
Confidence 99999999999989999999999999999999999987 99999999775333221111111111111111110000
Q ss_pred hhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEee
Q 015550 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G 269 (405)
. ...... ......+...+.. .......... .....+++|+++|+|
T Consensus 153 ~---------------~~~~~~----~~~~~~~~~~~~~-----------~~~~~~~~~~-----~~~~~~~~P~l~i~g 197 (267)
T 3fla_A 153 D---------------AAMLAD----PELLAMVLPAIRS-----------DYRAVETYRH-----EPGRRVDCPVTVFTG 197 (267)
T ss_dssp H---------------HHHHHS----HHHHHHHHHHHHH-----------HHHHHHHCCC-----CTTCCBSSCEEEEEE
T ss_pred c---------------hhhccC----HHHHHHHHHHHHH-----------HHHhhhcccc-----cccCcCCCCEEEEec
Confidence 0 000000 0000111100000 0000000000 011567899999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhcC
Q 015550 270 RHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 270 ~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
++|.+++++..+.+.+.+..++++++++|||+.+.++|+++++.|.+||++...
T Consensus 198 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 198 DHDPRVSVGEARAWEEHTTGPADLRVLPGGHFFLVDQAAPMIATMTEKLAGPAL 251 (267)
T ss_dssp TTCTTCCHHHHHGGGGGBSSCEEEEEESSSTTHHHHTHHHHHHHHHHHTC----
T ss_pred CCCCCCCHHHHHHHHHhcCCCceEEEecCCceeeccCHHHHHHHHHHHhccccc
Confidence 999999999999999887334999999999999999999999999999987653
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-27 Score=226.69 Aligned_cols=133 Identities=18% Similarity=0.248 Sum_probs=111.9
Q ss_pred CCcccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 16 PDAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
+..+++++|.+|+|...++ +.++|||+||++++...|..+++.|.+. ..+......+|+|+++|
T Consensus 69 ~~~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~-------------~~~~~~~~~~~~vi~~d 135 (388)
T 4i19_A 69 PQFTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDP-------------RAHGGDPADAFHLVIPS 135 (388)
T ss_dssp CEEEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCG-------------GGGTSCGGGCEEEEEEC
T ss_pred CcEEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCc-------------ccccCCCCCCeEEEEEc
Confidence 3445688999999987743 3467999999999999999999999861 00001111289999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+||||.|+.+.. ..++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 136 l~G~G~S~~~~~-~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 136 LPGFGLSGPLKS-AGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp CTTSGGGCCCSS-CCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred CCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 999999987764 378999999999999999999999999999999999999999999999999999754
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=212.97 Aligned_cols=192 Identities=20% Similarity=0.293 Sum_probs=163.2
Q ss_pred CcccccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 17 DAALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
..+++.+|.+++|..+++ .+|+||++||++++...|.. +++.|.+ +||.|++
T Consensus 9 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~ 66 (210)
T 1imj_A 9 EGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQ----------------------AGYRAVA 66 (210)
T ss_dssp CCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHH----------------------TTCEEEE
T ss_pred cceEeeCCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecchhHHHHHH----------------------CCCeEEE
Confidence 455788999999999743 45789999999999999998 5888887 4899999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHH--HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCC
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMA--KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~--~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
+|+||+|.|..+.. ..+.++.+ +++.++++.++.++++++|||+||.+++.+|..+|++++++|++++....
T Consensus 67 ~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~---- 140 (210)
T 1imj_A 67 IDLPGLGHSKEAAA--PAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD---- 140 (210)
T ss_dssp ECCTTSGGGTTSCC--SSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG----
T ss_pred ecCCCCCCCCCCCC--cchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccc----
Confidence 99999999987653 45566666 99999999999999999999999999999999999999999999986310
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
.
T Consensus 141 -----~-------------------------------------------------------------------------- 141 (210)
T 1imj_A 141 -----K-------------------------------------------------------------------------- 141 (210)
T ss_dssp -----G--------------------------------------------------------------------------
T ss_pred -----c--------------------------------------------------------------------------
Confidence 0
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.....+..+++|+++++|++|. ++.+..+.+ +.+ ++++++++++ ||+++.++++++.+.|.+|+++.
T Consensus 142 ---~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 142 ---INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp ---SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS-SSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred ---ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC-CCCCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 0012345677999999999999 999999999 765 8899999998 99999999999999999999864
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-28 Score=218.70 Aligned_cols=240 Identities=15% Similarity=0.177 Sum_probs=168.9
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+.+..+|.+++|.. | ++|+|||+||++++...|..+++.|.+ +||.|+++|+||+
T Consensus 23 ~~~~~~~g~~~~~~~-g-~~~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~G~ 78 (270)
T 3rm3_A 23 EQYPVLSGAEPFYAE-N-GPVGVLLVHGFTGTPHSMRPLAEAYAK----------------------AGYTVCLPRLKGH 78 (270)
T ss_dssp CSSCCCTTCCCEEEC-C-SSEEEEEECCTTCCGGGTHHHHHHHHH----------------------TTCEEEECCCTTC
T ss_pred CCccCCCCCcccccC-C-CCeEEEEECCCCCChhHHHHHHHHHHH----------------------CCCEEEEeCCCCC
Confidence 455778999999885 4 346899999999999999999999987 4999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|.|..+. ..++.+++++|+.++++.+. .++++++||||||.+|+.+|..+|+ |+++|++++.... ...
T Consensus 79 G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~-------~~~ 148 (270)
T 3rm3_A 79 GTHYEDM--ERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDI-------PAI 148 (270)
T ss_dssp SSCHHHH--HTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCC-------HHH
T ss_pred CCCcccc--ccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecc-------ccc
Confidence 9997543 26789999999999999997 7899999999999999999999999 9999999986311 000
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
............................ .............+.. ...+..
T Consensus 149 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------------------~~~~~~ 198 (270)
T 3rm3_A 149 -----AAGMTGGGELPRYLDSIGSDLKNPDVKE-LAYEKTPTASLLQLAR------------------------LMAQTK 198 (270)
T ss_dssp -----HHHSCC---CCSEEECCCCCCSCTTCCC-CCCSEEEHHHHHHHHH------------------------HHHHHH
T ss_pred -----ccchhcchhHHHHHHHhCccccccchHh-hcccccChhHHHHHHH------------------------HHHHHH
Confidence 0000000000000000000000000000 0000000000111110 011233
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC--eEEEEcCC-CccccccCH-HHHHHHHHHHHHhh
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV--ARMIDLPG-GHLVSHERT-EEVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~--~~l~~~~g-gH~~~~e~p-~~v~~~i~~fl~~~ 321 (405)
..+..+++|+|+++|++|.++|++.++.+.+.+ ++ ++++++++ ||+++.+.+ +++.+.|.+||++.
T Consensus 199 ~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 199 AKLDRIVCPALIFVSDEDHVVPPGNADIIFQGI-SSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp HTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHS-CCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCEEEEECCCCcccCHHHHHHHHHhc-CCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 556778999999999999999999999999987 44 49999997 999999976 89999999999875
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.9e-27 Score=220.69 Aligned_cols=275 Identities=18% Similarity=0.218 Sum_probs=167.2
Q ss_pred ccccCCEEEEEEEc--cC-------CCCeEEEEecCCCCCCchhhhHh------hhcCCCCCCCCchhhhccccCCCCCC
Q 015550 19 ALNDNGIKIFYRTY--GR-------GPTKVILITGLAGTHDAWGPQLK------GLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 19 ~~~~~g~~i~y~~~--G~-------~~p~vvllHG~~~~~~~~~~~~~------~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
+.+.+|..++|... +. +.|+|||+||++++...|..+.. .|.+
T Consensus 32 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~---------------------- 89 (377)
T 1k8q_A 32 VVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILAD---------------------- 89 (377)
T ss_dssp EECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHH----------------------
T ss_pred eEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHH----------------------
Confidence 45568999998776 22 35689999999999999887766 7776
Q ss_pred CCeEEEEecCCCCCCCCCC-----CCC--CCCCHHHHHH-HHHHHHH----HhCCccEEEEEEChhHHHHHHHHHhCCc-
Q 015550 84 AGIEVCAFDNRGMGRSSVP-----VKK--TEYTTKIMAK-DVIALMD----HLGWKQAHVFGHSMGAMIACKLAAMVPE- 150 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~-----~~~--~~~~~~~~~~-dl~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~~~p~- 150 (405)
+||+|+++|+||||.|... ... ..++++++++ |+.++++ +++.++++++||||||.+|+.+|.++|+
T Consensus 90 ~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~ 169 (377)
T 1k8q_A 90 AGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKL 169 (377)
T ss_dssp TTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHH
T ss_pred CCCCEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchh
Confidence 4899999999999999763 211 1678999998 8887665 5688899999999999999999999998
Q ss_pred --ccceEEEeccCCCCCCCCccchhHH---HHHHHHHhhcc--Ch---hhhhc---c-------------------Cccc
Q 015550 151 --RVLSLALLNVTGGGFQCCPKLDLQT---LSIAIRFFRAK--TP---EKRAA---V-------------------DLDT 198 (405)
Q Consensus 151 --~v~~lvl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~---~~~~~---~-------------------~~~~ 198 (405)
+|+++|++++............... .......+... .+ ..... . ....
T Consensus 170 ~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (377)
T 1k8q_A 170 AKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTM 249 (377)
T ss_dssp HTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGG
T ss_pred hhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcc
Confidence 8999999998753221111110000 00000000000 00 00000 0 0000
Q ss_pred ccCHhHHHhhhCCCc--hhHHHHHHHHhhhhhccccCcccchh---hhHHhhhcccChhhhhhhhhcCCcEEEEeecCCc
Q 015550 199 HYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDG---QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 199 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
....+.+..+..... ........+.......... .+.+.. ....+ .........+.++++|+|+|+|++|.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~P~lii~G~~D~ 325 (377)
T 1k8q_A 250 NLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQ-AFDWGSPVQNMMHY---HQSMPPYYNLTDMHVPIAVWNGGNDL 325 (377)
T ss_dssp GSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCB-CCCCSSHHHHHHHH---SSSSCCBCCGGGCCSCEEEEEETTCS
T ss_pred cCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCee-eccCCcchhhHHHc---CCCCCcccCHhhCCCCEEEEEeCCCc
Confidence 000001111100000 0000011111111110000 000000 00000 00001122367889999999999999
Q ss_pred cCCHHHHHHHHHHhCCCeE-EEEcCC-Cccccc---cCHHHHHHHHHHHHHh
Q 015550 274 IAQICYARRLAEKLYPVAR-MIDLPG-GHLVSH---ERTEEVNQALIDLIKA 320 (405)
Q Consensus 274 ~~~~~~~~~l~~~l~~~~~-l~~~~g-gH~~~~---e~p~~v~~~i~~fl~~ 320 (405)
++|++.++++++.+ ++++ ++++++ ||+.++ ++|+++++.|.+||++
T Consensus 326 ~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 326 LADPHDVDLLLSKL-PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp SSCHHHHHHHHTTC-TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred ccCHHHHHHHHHhC-cCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 99999999999987 7777 999998 999996 8899999999999975
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=209.70 Aligned_cols=223 Identities=13% Similarity=0.117 Sum_probs=157.0
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
++|+|||+||++++...|..+++.|.+ +||.|+++|+||||.|+.......++.++++
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 78 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQR----------------------SGYGVYVPLFSGHGTVEPLDILTKGNPDIWW 78 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEECCCTTCSSSCTHHHHHHCCHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHH----------------------CCCEEEecCCCCCCCCChhhhcCcccHHHHH
Confidence 456799999999999999999999987 4999999999999999644321123788899
Q ss_pred HHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 115 KDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 115 ~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
+|+.++++.+... +++++||||||.+++.+|.++|+++++++++++....... ...........+.. ...
T Consensus 79 ~d~~~~i~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~----~~~~~~~~~~~~~~----~~~ 150 (251)
T 3dkr_A 79 AESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHH----LVPGFLKYAEYMNR----LAG 150 (251)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBC----HHHHHHHHHHHHHH----HHT
T ss_pred HHHHHHHHHHHHhcCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccch----hhHHHHHHHHHHHh----hcc
Confidence 9999999988654 9999999999999999999999999999999877421110 00000000000000 000
Q ss_pred ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCC
Q 015550 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D 272 (405)
. .. ...... ......+. .+. .........+.++++|+++++|++|
T Consensus 151 ~---~~--~~~~~~-------------~~~~~~~~------------~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D 195 (251)
T 3dkr_A 151 K---SD--ESTQIL-------------AYLPGQLA------------AID-----QFATTVAADLNLVKQPTFIGQAGQD 195 (251)
T ss_dssp C---CC--CHHHHH-------------HHHHHHHH------------HHH-----HHHHHHHHTGGGCCSCEEEEEETTC
T ss_pred c---Cc--chhhHH-------------hhhHHHHH------------HHH-----HHHHHHhccccccCCCEEEEecCCC
Confidence 0 00 000000 00000000 000 0011233456778899999999999
Q ss_pred ccCCHHHHHHHHHHhCC--CeEEEEcCC-CccccccC-HHHHHHHHHHHHHhhc
Q 015550 273 VIAQICYARRLAEKLYP--VARMIDLPG-GHLVSHER-TEEVNQALIDLIKASE 322 (405)
Q Consensus 273 ~~~~~~~~~~l~~~l~~--~~~l~~~~g-gH~~~~e~-p~~v~~~i~~fl~~~~ 322 (405)
.+++++.++.+.+.+.. +.+++++++ ||..+.+. ++++.+.|.+||++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 196 ELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp SSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred cccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 99999999999998843 459999998 99999885 9999999999998754
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-27 Score=224.37 Aligned_cols=282 Identities=13% Similarity=0.100 Sum_probs=167.6
Q ss_pred CCcccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 16 PDAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
+..+++++|.+|+|...|+ +.++|||+||++++...|.++++.|.+...+. ..||+|+++|
T Consensus 86 ~~~~~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~----------------~~gf~vv~~D 149 (408)
T 3g02_A 86 PQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPE----------------TLPFHLVVPS 149 (408)
T ss_dssp CEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTT----------------TCCEEEEEEC
T ss_pred CCEEEEECCEEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccc----------------cCceEEEEEC
Confidence 3445678999999999885 45689999999999999999999998621110 1389999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC--CCc
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ--CCP 169 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~ 169 (405)
+||||.|+.+.....++++++++++.+++++++.+ +++++||||||++++.+|.++|+.+..++.+.+...... ...
T Consensus 150 lpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~~ 229 (408)
T 3g02_A 150 LPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSIE 229 (408)
T ss_dssp CTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCGG
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCccccccc
Confidence 99999999876445789999999999999999997 999999999999999999999765544444433322110 011
Q ss_pred cc---hhHHHHHHHHHhhccChhhhhcc-----------Ccccc---cCHhHHHhhhCCCchhHHHHHHHHhh-hhhccc
Q 015550 170 KL---DLQTLSIAIRFFRAKTPEKRAAV-----------DLDTH---YSQEYLEEYVGSSTRRAILYQEYVKG-ISATGM 231 (405)
Q Consensus 170 ~~---~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 231 (405)
.+ ....+.....+............ +.... +..+.+..+.......+.+....... +....
T Consensus 230 ~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y~~t~~~- 308 (408)
T 3g02_A 230 SLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESF- 308 (408)
T ss_dssp GSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTHH-
T ss_pred CCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHHHhhccc-
Confidence 11 11111111111111111000000 00000 00000000000001111111111000 00000
Q ss_pred cCcccchhhhHHhhhcccChhhh-------hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccc
Q 015550 232 QSNYGFDGQIHACWMHKMTQKDI-------QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVS 303 (405)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~-------~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~ 303 (405)
......++... ..... ..+..+++|+++++|.+|.+.++. .+.+...+.+++.++++ ||+++
T Consensus 309 ------~~s~~~y~e~~-~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~---~~~~~~~~~~~~~~~~~gGHf~~ 378 (408)
T 3g02_A 309 ------PRAIHTYREWV-PTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPR---SWIATTGNLVFFRDHAEGGHFAA 378 (408)
T ss_dssp ------HHHGGGHHHHT-TC-------CTTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHH
T ss_pred ------hhHHHHHHhhc-ccccccccccccccCCCcCCCEEEEeCCcccccCcH---HHHHhcCCeeEEEECCCCcCchh
Confidence 00000011100 00000 035678899999999999776654 33333334567788885 99999
Q ss_pred ccCHHHHHHHHHHHHHhhcCC
Q 015550 304 HERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 304 ~e~p~~v~~~i~~fl~~~~~~ 324 (405)
+|+|+++++.|.+|++.....
T Consensus 379 lE~Pe~~~~~l~~fl~~~~~~ 399 (408)
T 3g02_A 379 LERPRELKTDLTAFVEQVWQK 399 (408)
T ss_dssp HHCHHHHHHHHHHHHHHHC--
T ss_pred hhCHHHHHHHHHHHHHHHHHc
Confidence 999999999999999987654
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-28 Score=222.25 Aligned_cols=235 Identities=14% Similarity=0.103 Sum_probs=153.4
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCC--CeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA--GIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~--g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
+++|||+||++++...|.++++.|.+ + ||+|+++|+||||.|..+. .++++++
T Consensus 36 ~~~vvllHG~~~~~~~~~~~~~~L~~----------------------~~~g~~vi~~D~~G~G~s~~~~---~~~~~~~ 90 (302)
T 1pja_A 36 YKPVIVVHGLFDSSYSFRHLLEYINE----------------------THPGTVVTVLDLFDGRESLRPL---WEQVQGF 90 (302)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHH----------------------HSTTCCEEECCSSCSGGGGSCH---HHHHHHH
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHh----------------------cCCCcEEEEeccCCCccchhhH---HHHHHHH
Confidence 45699999999999999999999987 4 7999999999999997543 3578889
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
++++.++++.+ .++++++||||||.+|+.+|.++|+ +|+++|+++++..+....+. ... ............
T Consensus 91 ~~~l~~~~~~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~ 162 (302)
T 1pja_A 91 REAVVPIMAKA-PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTD----YLK---WLFPTSMRSNLY 162 (302)
T ss_dssp HHHHHHHHHHC-TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCH----HHH---HHCTTCCHHHHH
T ss_pred HHHHHHHhhcC-CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccch----hhh---hHHHHHHHHHHh
Confidence 99999999988 6899999999999999999999999 79999999987543322110 000 000000000000
Q ss_pred ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCC
Q 015550 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D 272 (405)
...............++....... .+... ..+...+..........+..+.+.+++ |+++|+|++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D 228 (302)
T 1pja_A 163 RICYSPWGQEFSICNYWHDPHHDD----LYLNA---------SSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDD 228 (302)
T ss_dssp HHHTSTTGGGSTGGGGBCCTTCHH----HHHHH---------CSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTC
T ss_pred hccchHHHHHhhhhhcccChhhhh----hhhcc---------chHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCC
Confidence 000000000000000111111000 11000 000011100000000112356678899 9999999999
Q ss_pred ccCCHHHHHHHHHHhCCC---------------------------eEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 273 VIAQICYARRLAEKLYPV---------------------------ARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 273 ~~~~~~~~~~l~~~l~~~---------------------------~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.++|++.++.+.+.. ++ ++++++++ ||+++.|+|+++++.|.+||
T Consensus 229 ~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 229 GVITPWQSSFFGFYD-ANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp SSSSSGGGGGTCEEC-TTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred CccchhHhhHhhhcC-CcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 999998887775532 44 89999999 99999999999999999886
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=217.93 Aligned_cols=219 Identities=16% Similarity=0.124 Sum_probs=150.7
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|..+. ..+++++++++
T Consensus 52 ~~lvllHG~~~~~~~~~~l~~~L~~-----------------------~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~ 106 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSAFRGWQERLGD-----------------------EVAVVPVQLPGRGLRLRER--PYDTMEPLAEA 106 (280)
T ss_dssp EEEEEECCTTCCGGGGTTHHHHHCT-----------------------TEEEEECCCTTSGGGTTSC--CCCSHHHHHHH
T ss_pred ceEEEECCCCCChHHHHHHHHhcCC-----------------------CceEEEEeCCCCCCCCCCC--CCCCHHHHHHH
Confidence 6799999999999999999999987 9999999999999997654 37899999999
Q ss_pred HHHHHHHh-CCccEEEEEEChhHHHHHHHHHhCCcccc----eEEEeccCCCCCCCCccch---hHHHHHHHHHhhccCh
Q 015550 117 VIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVL----SLALLNVTGGGFQCCPKLD---LQTLSIAIRFFRAKTP 188 (405)
Q Consensus 117 l~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~----~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 188 (405)
+.++++.+ +.++++|+||||||.+|+.+|.++|+++. .++++++..+......... ...+............
T Consensus 107 ~~~~l~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (280)
T 3qmv_A 107 VADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDD 186 (280)
T ss_dssp HHHHHHHTTCSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC-
T ss_pred HHHHHHHhCCCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCCh
Confidence 99999999 78899999999999999999999998887 8888776532221111110 0011000000000000
Q ss_pred hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
.... ..+ ... .. ...+... ..... ... ...+..+++|+++|+
T Consensus 187 ~~~~--------~~~----~~~-~~-----~~~~~~~---------------~~~~~--~~~---~~~~~~i~~P~l~i~ 228 (280)
T 3qmv_A 187 ADTL--------GAA----YFD-RR-----LPVLRAD---------------LRACE--RYD---WHPRPPLDCPTTAFS 228 (280)
T ss_dssp --------------------CC-TT-----HHHHHHH---------------HHHHH--TCC---CCCCCCBCSCEEEEE
T ss_pred hhhc--------CHH----HHH-HH-----HHHHHHH---------------HHHHH--hcc---ccCCCceecCeEEEE
Confidence 0000 000 000 00 0000000 00000 000 112457889999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccc--cCHHHHHHHHHHHH
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH--ERTEEVNQALIDLI 318 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~--e~p~~v~~~i~~fl 318 (405)
|++|.+++++..+.+.+.+....+++++++||+.++ ++++++++.|.+||
T Consensus 229 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 229 AAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp EEECSSSCHHHHHTTGGGBSSCEEEEEEEEETTGGGSSHHHHHHHHHHHTTC
T ss_pred ecCCCCcChHHHHHHHHhcCCceEEEEecCCCeEEcCchhHHHHHHHHHhhC
Confidence 999999999999999887744468888889999999 89999999998874
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=197.41 Aligned_cols=213 Identities=18% Similarity=0.117 Sum_probs=158.4
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
+.++.+|.++.+...+...|+||++||++++...|..+++.|.+ +||.|+++|+||+|
T Consensus 6 ~~~~~~g~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g 63 (238)
T 1ufo_A 6 ERLTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAE----------------------RGFLLLAFDAPRHG 63 (238)
T ss_dssp EEEEETTEEEEEEEESSCCEEEEEECCTTCCHHHHHHTSTTTGG----------------------GTEEEEECCCTTST
T ss_pred cccccCCEEEEEEecCCCccEEEEECCCcccchHHHHHHHHHHh----------------------CCCEEEEecCCCCc
Confidence 34677898876554444667899999999999999998888876 49999999999999
Q ss_pred CCCCCCCCCC---------CCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 98 RSSVPVKKTE---------YTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 98 ~S~~~~~~~~---------~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
.|..+..... .+.++.++|+.++++.+ +.++++++||||||.+|+.+|..+|+.+.+++++++.....
T Consensus 64 ~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~ 143 (238)
T 1ufo_A 64 EREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK 143 (238)
T ss_dssp TSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCC
T ss_pred cCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccch
Confidence 9976543211 13667788888888775 44799999999999999999999999999999988763211
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
... .. . ....+ ...+ ..
T Consensus 144 ~~~-~~----------------------~----~~~~~---------------~~~~-~~-------------------- 160 (238)
T 1ufo_A 144 LPQ-GQ----------------------V----VEDPG---------------VLAL-YQ-------------------- 160 (238)
T ss_dssp CCT-TC----------------------C----CCCHH---------------HHHH-HH--------------------
T ss_pred hhh-hh----------------------c----cCCcc---------------cchh-hc--------------------
Confidence 000 00 0 00000 0000 00
Q ss_pred hcccChhhhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHhCC-----CeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYP-----VARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-----~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.+....+..+ ++|+++++|++|.++|++.++++.+.+.+ +++++++++ ||.++.+.++++.+.|.+|+
T Consensus 161 -----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l 235 (238)
T 1ufo_A 161 -----APPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWL 235 (238)
T ss_dssp -----SCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHH
T ss_pred -----CChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHH
Confidence 0112234556 79999999999999999999999998831 889999998 99999998888888888887
Q ss_pred Hh
Q 015550 319 KA 320 (405)
Q Consensus 319 ~~ 320 (405)
++
T Consensus 236 ~~ 237 (238)
T 1ufo_A 236 EA 237 (238)
T ss_dssp HC
T ss_pred hc
Confidence 53
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=206.00 Aligned_cols=222 Identities=18% Similarity=0.136 Sum_probs=166.4
Q ss_pred cccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
+..+|.++.+..+++ ..|+||++||++++...|..++..|.+ +||.|+++|+||+|.
T Consensus 11 ~~~~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~G~g~ 68 (290)
T 3ksr_A 11 IPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAVG----------------------LGCICMTFDLRGHEG 68 (290)
T ss_dssp EEETTEEEEEEEEEEESEEEEEEECCTTCCTTTTHHHHHHHHT----------------------TTCEEECCCCTTSGG
T ss_pred ecCCCeEEEEEEecCCCCcEEEEeCCCCCCcCcHHHHHHHHHH----------------------CCCEEEEeecCCCCC
Confidence 566899999988886 567899999999999999999999988 499999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
|..+.. .++..++++|+.++++.+. .++++++||||||.+++.+|..+| +++++++++.......... .
T Consensus 69 s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~-~ 143 (290)
T 3ksr_A 69 YASMRQ--SVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQ-P 143 (290)
T ss_dssp GGGGTT--TCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTS-B
T ss_pred CCCCcc--cccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhc-c
Confidence 976543 6789999999999999883 248999999999999999999988 8999999876422110000 0
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
. ..... ......+.... .......
T Consensus 144 ~-----------------------------~~~~~--------~~~~~~~~~~~-------------------~~~~~~~ 167 (290)
T 3ksr_A 144 K-----------------------------VSLNA--------DPDLMDYRRRA-------------------LAPGDNL 167 (290)
T ss_dssp H-----------------------------HHHHH--------STTHHHHTTSC-------------------CCGGGCH
T ss_pred c-----------------------------ccccC--------Chhhhhhhhhh-------------------hhhcccc
Confidence 0 00000 00000000000 0001122
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC--CCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhhcCC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY--PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~--~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~~~~ 324 (405)
....+..+++|+|+++|++|.+++++..+.+.+.+. .+.+++++++ ||.++.+ .++++.+.+.+||++....
T Consensus 168 ~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 168 ALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp HHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHhcC
Confidence 334567788999999999999999999999999872 2356999998 9987665 8899999999999887654
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-26 Score=214.66 Aligned_cols=272 Identities=14% Similarity=0.117 Sum_probs=159.4
Q ss_pred ccCCEEEEEEEccC-CCCeEEEEecCCCCCCchh----------------hhHhhhcCCCCCCCCchhhhccccCCCCCC
Q 015550 21 NDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWG----------------PQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 21 ~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~----------------~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
..++..+.|...+. +.|+|||+||++++...|. .+++.|.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~---------------------- 91 (354)
T 2rau_A 34 PYDIISLHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLAR---------------------- 91 (354)
T ss_dssp TTCEEEEEEEEETTCCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHH----------------------
T ss_pred CCCceEEEeecccCCCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHh----------------------
Confidence 45778888877654 3468999999999987444 78888876
Q ss_pred CCeEEEEecCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHhC-Ccccc
Q 015550 84 AGIEVCAFDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMV-PERVL 153 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~ 153 (405)
+||+|+++|+||||.|..+... ..++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++|+
T Consensus 92 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~ 171 (354)
T 2rau_A 92 NGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIK 171 (354)
T ss_dssp TTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEE
T ss_pred CCCEEEEecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccc
Confidence 4899999999999999755421 157889999999999988 4788999999999999999999999 99999
Q ss_pred eEEEeccCCCCCCCCccc---hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCC-----CchhHHHHHHHHhh
Q 015550 154 SLALLNVTGGGFQCCPKL---DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-----STRRAILYQEYVKG 225 (405)
Q Consensus 154 ~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 225 (405)
++|++++.+......... ................+..... ................ ......+.......
T Consensus 172 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (354)
T 2rau_A 172 GLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGP--NNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVT 249 (354)
T ss_dssp EEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSST--TCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHT
T ss_pred eEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchh--hhHHHHHhccccccCccccchhhHHHHHHHhhhcc
Confidence 999997654321111100 0000111111000000000000 0000000000000000 00011111111100
Q ss_pred hhhccccCcccchhhhHHhhhc---------ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEc
Q 015550 226 ISATGMQSNYGFDGQIHACWMH---------KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL 296 (405)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~ 296 (405)
...............+...... ....+..+.+.++++|+|+|+|++|.++|. . .+.+.++++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~----~~~l~~~~~~~~~ 324 (354)
T 2rau_A 250 GSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-D----SKILPSNSEIILL 324 (354)
T ss_dssp TSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-C----GGGSCTTCEEEEE
T ss_pred ccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCcc-c----hhhhccCceEEEc
Confidence 0000000000000001000000 001223355678999999999999997653 2 2444578999999
Q ss_pred CC-CccccccCH---HHHHHHHHHHHHhh
Q 015550 297 PG-GHLVSHERT---EEVNQALIDLIKAS 321 (405)
Q Consensus 297 ~g-gH~~~~e~p---~~v~~~i~~fl~~~ 321 (405)
++ ||+++++++ +++++.|.+||++.
T Consensus 325 ~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 325 KGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp TTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred CCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 98 999988765 99999999999864
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-24 Score=185.63 Aligned_cols=180 Identities=17% Similarity=0.210 Sum_probs=138.0
Q ss_pred CCCeEEEEecCCCC---CCchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCC-CeEEEEecCCCCCCCCCCCCCCCCC
Q 015550 35 GPTKVILITGLAGT---HDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGA-GIEVCAFDNRGMGRSSVPVKKTEYT 109 (405)
Q Consensus 35 ~~p~vvllHG~~~~---~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~-g~~Vi~~D~~G~G~S~~~~~~~~~~ 109 (405)
.+|+|||+||++++ ...|.. +.+.|.+ . ||+|+++|+||++. .
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~----------------------~~g~~vi~~d~~g~~~---------~- 50 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEK----------------------IPGFQCLAKNMPDPIT---------A- 50 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTT----------------------STTCCEEECCCSSTTT---------C-
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhh----------------------ccCceEEEeeCCCCCc---------c-
Confidence 35689999999998 466776 7788876 4 89999999998632 1
Q ss_pred HHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccCh
Q 015550 110 TKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (405)
+..+++..+++.++. ++++++||||||.+++.+|.++| |+++|++++....... . .
T Consensus 51 --~~~~~~~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~------~-~------------ 107 (194)
T 2qs9_A 51 --RESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGD------E-N------------ 107 (194)
T ss_dssp --CHHHHHHHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTC------H-H------------
T ss_pred --cHHHHHHHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccch------h-h------------
Confidence 257788888999998 89999999999999999999999 9999999987421100 0 0
Q ss_pred hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
.....++.. ....+.+....+|+++++
T Consensus 108 --------------~~~~~~~~~---------------------------------------~~~~~~~~~~~~p~lii~ 134 (194)
T 2qs9_A 108 --------------ERASGYFTR---------------------------------------PWQWEKIKANCPYIVQFG 134 (194)
T ss_dssp --------------HHHTSTTSS---------------------------------------CCCHHHHHHHCSEEEEEE
T ss_pred --------------hHHHhhhcc---------------------------------------cccHHHHHhhCCCEEEEE
Confidence 000000000 001123344568999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCCC
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~~ 325 (405)
|++|.++|++.++.+++.+ +++++++++ ||+++.++|+++++.+ +||++...+.
T Consensus 135 G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~~-~fl~~~~~~~ 189 (194)
T 2qs9_A 135 STDDPFLPWKEQQEVADRL--ETKLHKFTDCGHFQNTEFHELITVVK-SLLKVPALEH 189 (194)
T ss_dssp ETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTSCSSCCHHHHHHHH-HHHTCCCCCC
T ss_pred eCCCCcCCHHHHHHHHHhc--CCeEEEeCCCCCccchhCHHHHHHHH-HHHHhhhhhh
Confidence 9999999999999999987 789999998 9999999999998876 9998766543
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=204.05 Aligned_cols=194 Identities=18% Similarity=0.243 Sum_probs=151.7
Q ss_pred ccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchh-------hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWG-------PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~-------~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
++..+...+.|...+. .+++|||+||++.+...|. .++..|.+ +||.|++
T Consensus 44 ~~~~~~~~~~~~~p~~~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~----------------------~G~~V~~ 101 (328)
T 1qlw_A 44 TVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLR----------------------KGYSTYV 101 (328)
T ss_dssp EEEESCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHH----------------------TTCCEEE
T ss_pred eEEeeeEEEEEEccCCCCCccEEEEeCCCCCCCccccCCCCchHHHHHHHH----------------------CCCeEEE
Confidence 4444555666665553 4567999999999999998 48888876 4999999
Q ss_pred ecCCCCCCCCCCCCCC----------------------------CCC----------------HHH--------------
Q 015550 91 FDNRGMGRSSVPVKKT----------------------------EYT----------------TKI-------------- 112 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~----------------------------~~~----------------~~~-------------- 112 (405)
+|+||||.|....... .+. +++
T Consensus 102 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (328)
T 1qlw_A 102 IDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMP 181 (328)
T ss_dssp EECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSC
T ss_pred ECCCCcccCCCCCcccccccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCC
Confidence 9999999997653210 000 333
Q ss_pred ----HHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccCh
Q 015550 113 ----MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (405)
Q Consensus 113 ----~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (405)
+++++.++++.++ +++++||||||.+++.+|.++|++|+++|++++...
T Consensus 182 ~~~~~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------- 234 (328)
T 1qlw_A 182 TPNPTVANLSKLAIKLD--GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------- 234 (328)
T ss_dssp SSCHHHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-------------------------
T ss_pred ChhHHHHHHHHHHHHhC--CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-------------------------
Confidence 7888888998886 899999999999999999999999999999997520
Q ss_pred hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
. ........+++|+|+++
T Consensus 235 -------------------------------------~-------------------------~~~~~~~~~~~PvLii~ 252 (328)
T 1qlw_A 235 -------------------------------------P-------------------------KPEDVKPLTSIPVLVVF 252 (328)
T ss_dssp -------------------------------------C-------------------------CGGGCGGGTTSCEEEEE
T ss_pred -------------------------------------C-------------------------CHHHHhhccCCCEEEEe
Confidence 0 00001123468999999
Q ss_pred ecCCccCCH-----HHHHHHHHHhC---CCeEEEEcCC-C-----ccccccC-HHHHHHHHHHHHHhhcC
Q 015550 269 GRHDVIAQI-----CYARRLAEKLY---PVARMIDLPG-G-----HLVSHER-TEEVNQALIDLIKASEK 323 (405)
Q Consensus 269 G~~D~~~~~-----~~~~~l~~~l~---~~~~l~~~~g-g-----H~~~~e~-p~~v~~~i~~fl~~~~~ 323 (405)
|++|.++|+ +.++.+.+.+. .+++++++++ | |+++.+. ++++.+.|.+||++...
T Consensus 253 G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 253 GDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA 322 (328)
T ss_dssp CSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC
T ss_pred ccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhccc
Confidence 999999996 88888888873 3899999994 5 9999998 99999999999998654
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=185.86 Aligned_cols=181 Identities=19% Similarity=0.286 Sum_probs=138.4
Q ss_pred cCCCCeEEEEecCCCCCC-chhhhHh-hhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 33 GRGPTKVILITGLAGTHD-AWGPQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~-~~~~~~~-~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
|+++|+|||+||++++.. .|..++. .|.+ +||+|+++|+| .|. ..+.
T Consensus 1 G~g~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~---~~~------~~~~ 49 (192)
T 1uxo_A 1 GRGTKQVYIIHGYRASSTNHWFPWLKKRLLA----------------------DGVQADILNMP---NPL------QPRL 49 (192)
T ss_dssp ---CCEEEEECCTTCCTTSTTHHHHHHHHHH----------------------TTCEEEEECCS---CTT------SCCH
T ss_pred CCCCCEEEEEcCCCCCcchhHHHHHHHHHHh----------------------CCcEEEEecCC---CCC------CCCH
Confidence 456677999999999998 8988885 5854 39999999999 232 1268
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc--ccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccCh
Q 015550 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (405)
+++++++.++++.+ .++++++||||||.+++.+|.++|+ +|+++|++++........+.
T Consensus 50 ~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~------------------ 110 (192)
T 1uxo_A 50 EDWLDTLSLYQHTL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM------------------ 110 (192)
T ss_dssp HHHHHHHHTTGGGC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG------------------
T ss_pred HHHHHHHHHHHHhc-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchh------------------
Confidence 99999999999998 7899999999999999999999999 99999999986422110000
Q ss_pred hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
+..+... ......+.++++|+++++
T Consensus 111 ----------------~~~~~~~---------------------------------------~~~~~~~~~~~~P~l~i~ 135 (192)
T 1uxo_A 111 ----------------LDEFTQG---------------------------------------SFDHQKIIESAKHRAVIA 135 (192)
T ss_dssp ----------------GGGGTCS---------------------------------------CCCHHHHHHHEEEEEEEE
T ss_pred ----------------hhhhhhc---------------------------------------CCCHHHHHhhcCCEEEEe
Confidence 0000000 001134556778999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHH---HHHHHHHHHHHh
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE---EVNQALIDLIKA 320 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~---~v~~~i~~fl~~ 320 (405)
|++|.++|++.++.+++.+ +++++++++ ||+.+.++++ ++.+.|.+|+++
T Consensus 136 g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 136 SKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp ETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred cCCCCcCCHHHHHHHHHhc--CceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999986 789999998 9999988864 457777777754
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-24 Score=186.12 Aligned_cols=186 Identities=14% Similarity=0.160 Sum_probs=139.9
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecC-----CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGL-----AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~-----~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
...+| ++.+..+.+ ..|+||++||+ ..+...|..+++.|.+ +||.|++
T Consensus 12 ~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~g~~v~~ 68 (208)
T 3trd_A 12 QGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDE----------------------LGLKTVR 68 (208)
T ss_dssp ECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHH----------------------TTCEEEE
T ss_pred ECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHH----------------------CCCEEEE
Confidence 44567 888877764 34689999993 3334457888888887 4999999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
+|+||+|.|...........+++.+.+..+.+.++.++++++||||||.+++.++ .+| +++++|++++...
T Consensus 69 ~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~------- 139 (208)
T 3trd_A 69 FNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVF------- 139 (208)
T ss_dssp ECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTT-------
T ss_pred EecCCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccc-------
Confidence 9999999997663212222333333333333444668999999999999999999 777 9999999998620
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
.
T Consensus 140 ---------------------------------------------------------------~---------------- 140 (208)
T 3trd_A 140 ---------------------------------------------------------------Y---------------- 140 (208)
T ss_dssp ---------------------------------------------------------------S----------------
T ss_pred ---------------------------------------------------------------c----------------
Confidence 0
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
.....+..+++|+++++|++|.++|++..+++.+.+..+++++++++ ||.+..+. +++.+.|.+||
T Consensus 141 -~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl 207 (208)
T 3trd_A 141 -EGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVRNL 207 (208)
T ss_dssp -GGGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHHHH
T ss_pred -CCchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHHHh
Confidence 00012344579999999999999999999999998844599999998 99987664 89999999997
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=184.16 Aligned_cols=172 Identities=17% Similarity=0.176 Sum_probs=141.5
Q ss_pred cCCCCeEEEEecCCCCCCchh--hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 33 GRGPTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
|.++|+||++||++++...|. .+.+.|.+ +||.|+++|+||+|.|.... ...+.
T Consensus 1 g~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~g~g~s~~~~--~~~~~ 56 (176)
T 2qjw_A 1 GMSRGHCILAHGFESGPDALKVTALAEVAER----------------------LGWTHERPDFTDLDARRDLG--QLGDV 56 (176)
T ss_dssp CCSSCEEEEECCTTCCTTSHHHHHHHHHHHH----------------------TTCEEECCCCHHHHTCGGGC--TTCCH
T ss_pred CCCCcEEEEEeCCCCCccHHHHHHHHHHHHH----------------------CCCEEEEeCCCCCCCCCCCC--CCCCH
Confidence 456678999999999888666 88888887 49999999999999997443 35567
Q ss_pred HHHHHHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChh
Q 015550 111 KIMAKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (405)
.+.++++.+.++... .++++++||||||.+++.++.++| ++++|++++......
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~----------------------- 111 (176)
T 2qjw_A 57 RGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGP----------------------- 111 (176)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTT-----------------------
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccc-----------------------
Confidence 888888888887764 579999999999999999999998 999999997631100
Q ss_pred hhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEee
Q 015550 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G 269 (405)
+. .+..+++|+++++|
T Consensus 112 ----------~~------------------------------------------------------~~~~~~~P~l~i~g 127 (176)
T 2qjw_A 112 ----------LP------------------------------------------------------ALDAAAVPISIVHA 127 (176)
T ss_dssp ----------BC------------------------------------------------------CCCCCSSCEEEEEE
T ss_pred ----------cC------------------------------------------------------cccccCCCEEEEEc
Confidence 00 02456799999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 270 RHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 270 ~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
++|.++|++..+++.+.+ +++++++++||.. .++++++.+.|.+|+++
T Consensus 128 ~~D~~~~~~~~~~~~~~~--~~~~~~~~~~H~~-~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 128 WHDELIPAADVIAWAQAR--SARLLLVDDGHRL-GAHVQAASRAFAELLQS 175 (176)
T ss_dssp TTCSSSCHHHHHHHHHHH--TCEEEEESSCTTC-TTCHHHHHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHhC--CceEEEeCCCccc-cccHHHHHHHHHHHHHh
Confidence 999999999999999987 6788888449997 58999999999999975
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=9e-24 Score=189.56 Aligned_cols=189 Identities=19% Similarity=0.196 Sum_probs=147.6
Q ss_pred cccCCEEEEEEEcc---CCCCeEEEEecCCCCCC-----chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 20 LNDNGIKIFYRTYG---RGPTKVILITGLAGTHD-----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 20 ~~~~g~~i~y~~~G---~~~p~vvllHG~~~~~~-----~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
+..++.++.+..+. ++.|+||++||+++... .|..+++.|.+ +||.|+++
T Consensus 28 ~~~~~g~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~ 85 (249)
T 2i3d_A 28 FNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQK----------------------RGFTTLRF 85 (249)
T ss_dssp EEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHH----------------------TTCEEEEE
T ss_pred EECCCceEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHH----------------------CCCEEEEE
Confidence 34444477665443 34578999999854332 35778888877 49999999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
|+||+|.|..... .+...+ +|+.++++.+.. ++++++||||||.+++.+|..+|+ ++++|++++......
T Consensus 86 d~~g~G~s~~~~~---~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 160 (249)
T 2i3d_A 86 NFRSIGRSQGEFD---HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD 160 (249)
T ss_dssp CCTTSTTCCSCCC---SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC
T ss_pred CCCCCCCCCCCCC---CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh
Confidence 9999999976542 345555 888888777632 379999999999999999999998 999999998631000
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
T Consensus 161 -------------------------------------------------------------------------------- 160 (249)
T 2i3d_A 161 -------------------------------------------------------------------------------- 160 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC----CeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP----VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~----~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
...+..+++|+++++|++|.+++++..+++.+.+.. +++++++++ ||... +.++++.+.|.+||++.
T Consensus 161 -------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~ 232 (249)
T 2i3d_A 161 -------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRR 232 (249)
T ss_dssp -------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHH
T ss_pred -------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHh
Confidence 012345679999999999999999999999998842 789999998 99987 89999999999999987
Q ss_pred cC
Q 015550 322 EK 323 (405)
Q Consensus 322 ~~ 323 (405)
..
T Consensus 233 l~ 234 (249)
T 2i3d_A 233 LN 234 (249)
T ss_dssp HT
T ss_pred cC
Confidence 64
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=197.18 Aligned_cols=234 Identities=11% Similarity=0.073 Sum_probs=138.7
Q ss_pred EEEEEEEcc-C--CCCeEEEEecCCCCCCc---hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec----CC
Q 015550 25 IKIFYRTYG-R--GPTKVILITGLAGTHDA---WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD----NR 94 (405)
Q Consensus 25 ~~i~y~~~G-~--~~p~vvllHG~~~~~~~---~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D----~~ 94 (405)
..++|...| + ++|+|||+||++++... |..+++.|.. ||+|+++| +|
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~~-----------------------g~~Vi~~Dl~~D~~ 80 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQG-----------------------DWAFVQVEVPSGKI 80 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHHTT-----------------------TCEEEEECCGGGBT
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHHHC-----------------------CcEEEEEeccCCCC
Confidence 568888777 3 45789999999876543 5678888854 99999995 59
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCCccEEEEEEChhHHHHHHHHH--hCCcccceEEEeccCCCCCCCC
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAA--MVPERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~~~~~~ 168 (405)
|||.|+. ...++|+.++++ .++.++++|+||||||++|+.+|. .+|++|+++|++++......
T Consensus 81 G~G~S~~---------~~~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~-- 149 (335)
T 2q0x_A 81 GSGPQDH---------AHDAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPEN-- 149 (335)
T ss_dssp TSCSCCH---------HHHHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTS--
T ss_pred CCCCccc---------cCcHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchh--
Confidence 9999852 234445544444 478899999999999999999999 57999999999998642211
Q ss_pred ccchhHHHHH----HHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHh
Q 015550 169 PKLDLQTLSI----AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHAC 244 (405)
Q Consensus 169 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (405)
.......... ............... ........... ..+...... ......+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~ 208 (335)
T 2q0x_A 150 PLFTPEGCAARKEHVEKLMAEGRGEDSLA-----------MLKHYDIPITP----ARLAGGGFP------TLQEAVWNPC 208 (335)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHTCTTCGGG-----------GTTTCSSCCCH----HHHHTCSCS------SHHHHTHHHH
T ss_pred cccCHHHHHHHHHHHHHHhhccCcccccc-----------chhhccCccCH----HHHhhccCC------Cchhhhhhhh
Confidence 1111100000 000100000000000 00000000000 000000000 0000000000
Q ss_pred hhcccChhhhhhhhhcCCcEEEEeecCCccCCHHH-----HHHHHHHhCCCeE--------E-----EEcCC-Ccccccc
Q 015550 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY-----ARRLAEKLYPVAR--------M-----IDLPG-GHLVSHE 305 (405)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~-----~~~l~~~l~~~~~--------l-----~~~~g-gH~~~~e 305 (405)
. .....+..+.+..+++|+|+|+|++|.++|++. .+++.+.+ ++++ + +++++ ||
T Consensus 209 ~-~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~i~~agH----- 281 (335)
T 2q0x_A 209 I-RKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHT-GCNRVTVSYFNDTCDELRRVLKAAES----- 281 (335)
T ss_dssp H-TTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHS-SSSCEEEEECCCEECTTSCEEECCHH-----
T ss_pred h-hhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhc-CccccccccccchhhhhhcccCCCCC-----
Confidence 0 001123345678899999999999999999763 46666665 7776 6 78888 99
Q ss_pred CHHHHHHHHHHHHHhhcC
Q 015550 306 RTEEVNQALIDLIKASEK 323 (405)
Q Consensus 306 ~p~~v~~~i~~fl~~~~~ 323 (405)
++++.|.+||++...
T Consensus 282 ---e~~~~i~~FL~~~~~ 296 (335)
T 2q0x_A 282 ---EHVAAILQFLADEDE 296 (335)
T ss_dssp ---HHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhhhh
Confidence 458999999987653
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=185.44 Aligned_cols=170 Identities=18% Similarity=0.236 Sum_probs=139.3
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCe---EEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI---EVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~---~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
++|+|||+||++++...|..+++.|.+ +|| +|+++|+||+|.|. ..+.+
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~~~~v~~~d~~g~g~s~------~~~~~ 53 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVS----------------------QGWSRDKLYAVDFWDKTGTN------YNNGP 53 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHH----------------------TTCCGGGEEECCCSCTTCCH------HHHHH
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHH----------------------cCCCCccEEEEecCCCCCch------hhhHH
Confidence 346799999999999999999999987 377 79999999999885 35788
Q ss_pred HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC--CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChh
Q 015550 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (405)
++++++.+++++++.++++++||||||.+++.++.++ |++|+++|++++.......
T Consensus 54 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~---------------------- 111 (181)
T 1isp_A 54 VLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG---------------------- 111 (181)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS----------------------
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc----------------------
Confidence 8999999999999999999999999999999999998 8999999999986310000
Q ss_pred hhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEee
Q 015550 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G 269 (405)
..+. + . ....++|+++|+|
T Consensus 112 ----------------------------------~~~~--~--------------------~-----~~~~~~p~l~i~G 130 (181)
T 1isp_A 112 ----------------------------------KALP--G--------------------T-----DPNQKILYTSIYS 130 (181)
T ss_dssp ----------------------------------BCCC--C--------------------S-----CTTCCCEEEEEEE
T ss_pred ----------------------------------ccCC--C--------------------C-----CCccCCcEEEEec
Confidence 0000 0 0 0113479999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 270 RHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 270 ~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
++|.++|++.+ ++ ++++++++++ ||+.+.+++ ++.+.|.+||++..
T Consensus 131 ~~D~~v~~~~~-----~~-~~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 131 SADMIVMNYLS-----RL-DGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp TTCSSSCHHHH-----CC-BTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred CCCcccccccc-----cC-CCCcceeeccCchHhhccCH-HHHHHHHHHHhccC
Confidence 99999998743 24 7889999998 999999997 79999999997754
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=189.93 Aligned_cols=248 Identities=11% Similarity=0.074 Sum_probs=154.1
Q ss_pred ccccCCEEEEEEEccC----CCCeEEEEecCC---CCCCchh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 19 ALNDNGIKIFYRTYGR----GPTKVILITGLA---GTHDAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~----~~p~vvllHG~~---~~~~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
+.+.+|.+++|..+.+ ..|+||++||++ ++...|. .+.+.|.+ +|.|++
T Consensus 8 ~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~ 64 (275)
T 3h04_A 8 VITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTE-----------------------HYDLIQ 64 (275)
T ss_dssp EECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTT-----------------------TEEEEE
T ss_pred EecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHh-----------------------CceEEe
Confidence 3556899999888754 346799999998 6666665 67777777 699999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
+|+||+|.+.. ....+++.+.+..+.+.++.++++++||||||.+|+.+|.+ ++++++|++++..........
T Consensus 65 ~d~~~~~~~~~-----~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~ 137 (275)
T 3h04_A 65 LSYRLLPEVSL-----DCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFK 137 (275)
T ss_dssp ECCCCTTTSCH-----HHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHH
T ss_pred eccccCCcccc-----chhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccc
Confidence 99999987632 22455555566666666677899999999999999999998 789999999987422111000
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHh------hhhhccccCcccchhhhHHh
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVK------GISATGMQSNYGFDGQIHAC 244 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 244 (405)
.... ......................... ............... .+.... . .
T Consensus 138 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~ 195 (275)
T 3h04_A 138 TTNS---YYAKIAQSINETMIAQLTSPTPVVQ-------DQIAQRFLIYVYARGTGKWINMINIAD-Y-----------T 195 (275)
T ss_dssp SCCH---HHHHHHTTSCHHHHHTTSCSSCCSS-------CSSGGGHHHHHHHHHHTCHHHHHCCSC-T-----------T
T ss_pred cccc---hhhcccccchHHHHhcccCCCCcCC-------CccccchhhhhhhhhcCchHHhhcccc-c-----------c
Confidence 0000 0000000011111111000000000 000000000000000 000000 0 0
Q ss_pred hhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCH---HHHHHHHHHHHHh
Q 015550 245 WMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKA 320 (405)
Q Consensus 245 ~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p---~~v~~~i~~fl~~ 320 (405)
+.. .......+..++ |+|+++|++|.++|++.++++.+.+ ++.+++++++ ||.++.+.+ +++.+.+.+||++
T Consensus 196 ~~~--~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~ 271 (275)
T 3h04_A 196 DSK--YNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHV-PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNA 271 (275)
T ss_dssp SGG--GSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTC-SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHH
T ss_pred ccc--cccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhc-CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHH
Confidence 000 001112345666 9999999999999999999999987 8899999998 999999988 6999999999987
Q ss_pred hc
Q 015550 321 SE 322 (405)
Q Consensus 321 ~~ 322 (405)
..
T Consensus 272 ~l 273 (275)
T 3h04_A 272 IT 273 (275)
T ss_dssp HH
T ss_pred Hh
Confidence 53
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=192.18 Aligned_cols=191 Identities=17% Similarity=0.148 Sum_probs=153.3
Q ss_pred cccCCEEEEEEEccC--CCCeEEEEecCCCCCCch--hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 20 LNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAW--GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~--~~p~vvllHG~~~~~~~~--~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+..+|.++.+..+.+ ..|+||++||++++...| ..+++.|.+ +||.|+++|+||
T Consensus 17 ~~~~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g 74 (223)
T 2o2g_A 17 VSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQ----------------------AGLATLLIDLLT 74 (223)
T ss_dssp EEETTEEEEEEEECCTTCCEEEEEECCTTCCTTCHHHHHHHHHHHH----------------------HTCEEEEECSSC
T ss_pred EecCCeEEEEEEecCCCCceEEEEecCCCCCCCccchHHHHHHHHH----------------------CCCEEEEEcCCC
Confidence 566899999887765 356899999999988864 467888876 499999999999
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCCc------cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 96 MGRSSVPVK--KTEYTTKIMAKDVIALMDHLGWK------QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 96 ~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
+|.|..... ...++.+++++|+.++++.+..+ +++++|||+||.+++.+|..+|++++++|++++..
T Consensus 75 ~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~----- 149 (223)
T 2o2g_A 75 QEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRP----- 149 (223)
T ss_dssp HHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCG-----
T ss_pred cCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCC-----
Confidence 998854321 12378899999999999987543 89999999999999999999999999999998741
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
..
T Consensus 150 --~~---------------------------------------------------------------------------- 151 (223)
T 2o2g_A 150 --DL---------------------------------------------------------------------------- 151 (223)
T ss_dssp --GG----------------------------------------------------------------------------
T ss_pred --Cc----------------------------------------------------------------------------
Confidence 00
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Cccccc-cCHHHHHHHHHHHHHhh
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-ERTEEVNQALIDLIKAS 321 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~-e~p~~v~~~i~~fl~~~ 321 (405)
....+..+++|+++++|++|.++|.+..+.+.+ ..++.+++++++ ||.+.. +.++++.+.+.+||++.
T Consensus 152 -----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 152 -----APSALPHVKAPTLLIVGGYDLPVIAMNEDALEQ-LQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp -----CTTTGGGCCSCEEEEEETTCHHHHHHHHHHHHH-CCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHhcCCCCEEEEEccccCCCCHHHHHHHHh-hCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 001235667999999999999998666555555 458899999998 999766 46799999999999875
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-25 Score=197.61 Aligned_cols=188 Identities=16% Similarity=0.108 Sum_probs=145.9
Q ss_pred ccCCEEEEEEEcc-C-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 21 NDNGIKIFYRTYG-R-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 21 ~~~g~~i~y~~~G-~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
..++..++|...+ + ..|+|||+||++++...|..+++.|.+ +||.|+++|+||+|.
T Consensus 37 ~~~~~~l~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g~ 94 (262)
T 1jfr_A 37 GFGGGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLAS----------------------QGFVVFTIDTNTTLD 94 (262)
T ss_dssp SSCCEEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHT----------------------TTCEEEEECCSSTTC
T ss_pred CCCceeEEecCCCCCCCCCEEEEeCCcCCCchhHHHHHHHHHh----------------------CCCEEEEeCCCCCCC
Confidence 3467889998774 2 346899999999999999999999987 499999999999997
Q ss_pred CCCCCCCCCCCHHHHHHHHHH---HHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 99 SSVPVKKTEYTTKIMAKDVIA---LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~---~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
+.... ..++...++.+.+ +++.++.++++++||||||.+++.+|.++|+ |+++|++++...
T Consensus 95 ~~~~~---~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------ 158 (262)
T 1jfr_A 95 QPDSR---GRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------ 158 (262)
T ss_dssp CHHHH---HHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------
T ss_pred CCchh---HHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc------------
Confidence 63210 0111112222221 1223455789999999999999999999997 999999986520
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
..
T Consensus 159 ------------------------------------------------------------------------------~~ 160 (262)
T 1jfr_A 159 ------------------------------------------------------------------------------DK 160 (262)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred hhhhcCCcEEEEeecCCccCCHHH-HHHHHHHhC--CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLY--PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~-~~~l~~~l~--~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
.+..+++|+|+++|++|.+++++. .+++.+.+. .+.+++++++ ||..+.++++++.+.|.+||++....
T Consensus 161 ~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~~ 233 (262)
T 1jfr_A 161 TWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDS 233 (262)
T ss_dssp CCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSC
T ss_pred cccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHHhcC
Confidence 234567999999999999999998 999999873 2458999998 99999999999999999999987654
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=186.11 Aligned_cols=176 Identities=13% Similarity=0.154 Sum_probs=138.9
Q ss_pred CEEEEEEEccCCCCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 24 GIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 24 g~~i~y~~~G~~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
|.+++|...|++ |+|||+||++++. ..|...+..+.. + ++.+|.+|++
T Consensus 6 g~~l~~~~~g~~-~~vv~~HG~~~~~~~~~~~~~~~~~~-----------------------~--~~~v~~~~~~----- 54 (191)
T 3bdv_A 6 EIDLRLTEVSQQ-LTMVLVPGLRDSDDEHWQSHWERRFP-----------------------H--WQRIRQREWY----- 54 (191)
T ss_dssp HHHHHHHHHHTT-CEEEEECCTTCCCTTSHHHHHHHHCT-----------------------T--SEECCCSCCS-----
T ss_pred cCccccCCCCCC-ceEEEECCCCCCchhhHHHHHHHhcC-----------------------C--eEEEeccCCC-----
Confidence 445556555654 5799999999988 678777765443 2 3567788764
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (405)
.++++++++|+.+++++++ ++++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 55 ----~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--------------- 114 (191)
T 3bdv_A 55 ----QADLDRWVLAIRRELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE--------------- 114 (191)
T ss_dssp ----SCCHHHHHHHHHHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT---------------
T ss_pred ----CcCHHHHHHHHHHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc---------------
Confidence 4578999999999999988 89999999999999999999999999999999986310000
Q ss_pred hhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCC
Q 015550 183 FRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (405)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (405)
+. . ...+..+++
T Consensus 115 -----------------~~---------~------------------------------------------~~~~~~~~~ 126 (191)
T 3bdv_A 115 -----------------ID---------D------------------------------------------RIQASPLSV 126 (191)
T ss_dssp -----------------CT---------T------------------------------------------TSCSSCCSS
T ss_pred -----------------Cc---------c------------------------------------------ccccccCCC
Confidence 00 0 012456789
Q ss_pred cEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Cccccc----cCHHHHHHHHHHHHHhh
Q 015550 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH----ERTEEVNQALIDLIKAS 321 (405)
Q Consensus 263 Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~----e~p~~v~~~i~~fl~~~ 321 (405)
|+++++|++|.++|++.++++.+.+ +++++++++ ||+++. +.++.+ +.|.+|+++.
T Consensus 127 P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 127 PTLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp CEEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred CEEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 9999999999999999999999976 789999998 999988 455555 9999999876
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=195.63 Aligned_cols=228 Identities=15% Similarity=0.130 Sum_probs=153.9
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
...+|.+|++..+.+ ..|+||++||++++...|..+...+.. ||.|+++|+||
T Consensus 88 ~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~~~-----------------------G~~v~~~D~rG 144 (346)
T 3fcy_A 88 TGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYVAA-----------------------GFTVVAMDVRG 144 (346)
T ss_dssp ECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCCSGGGHHHHTT-----------------------TCEEEEECCTT
T ss_pred EcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCChhhhhHHHhC-----------------------CcEEEEEcCCC
Confidence 345788888877643 246899999999999999988866654 99999999999
Q ss_pred CCCCCCCCC------------------CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcc
Q 015550 96 MGRSSVPVK------------------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPER 151 (405)
Q Consensus 96 ~G~S~~~~~------------------~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~ 151 (405)
+|.|..+.. ...+.+....+|+.++++.+ +.++++++|||+||.+|+.+|..+|+
T Consensus 145 ~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~- 223 (346)
T 3fcy_A 145 QGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR- 223 (346)
T ss_dssp SSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-
T ss_pred CCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-
Confidence 999876532 12344556777777777665 33689999999999999999999997
Q ss_pred cceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccc
Q 015550 152 VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGM 231 (405)
Q Consensus 152 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (405)
|+++|+++|..... ........ ..... .....++................
T Consensus 224 v~~~vl~~p~~~~~-----------~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---------- 273 (346)
T 3fcy_A 224 VRKVVSEYPFLSDY-----------KRVWDLDL-AKNAY--------QEITDYFRLFDPRHERENEVFTK---------- 273 (346)
T ss_dssp CCEEEEESCSSCCH-----------HHHHHTTC-CCGGG--------HHHHHHHHHHCTTCTTHHHHHHH----------
T ss_pred ccEEEECCCcccCH-----------HHHhhccc-cccch--------HHHHHHHHhcCCCcchHHHHHHH----------
Confidence 99999998753110 00000000 00000 00000000000000000000000
Q ss_pred cCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHH
Q 015550 232 QSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEV 310 (405)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v 310 (405)
....+....+.++++|+|+++|++|.++|++.+..+.+.+..+++++++++ ||..+ +++
T Consensus 274 ----------------~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~ 333 (346)
T 3fcy_A 274 ----------------LGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM----RGF 333 (346)
T ss_dssp ----------------HGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC----TTH
T ss_pred ----------------hCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH----HHH
Confidence 011123345677889999999999999999999999998855799999998 99987 577
Q ss_pred HHHHHHHHHhh
Q 015550 311 NQALIDLIKAS 321 (405)
Q Consensus 311 ~~~i~~fl~~~ 321 (405)
.+.+.+||++.
T Consensus 334 ~~~i~~fl~~l 344 (346)
T 3fcy_A 334 GDLAMQFMLEL 344 (346)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 88899999864
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-23 Score=183.61 Aligned_cols=193 Identities=12% Similarity=0.090 Sum_probs=155.3
Q ss_pred cccCCEEEEEEEccCC---CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 20 LNDNGIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~---~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+.+|.++.+..+.+. .|+||++||++++...|..++..|.+ +||.|+++|+||+
T Consensus 9 ~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~g~ 66 (236)
T 1zi8_A 9 QSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAFMRETVSWLVD----------------------QGYAAVCPDLYAR 66 (236)
T ss_dssp ECTTSCEECEEEECCSSCSEEEEEEECCTTBSCHHHHHHHHHHHH----------------------TTCEEEEECGGGG
T ss_pred ecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHh----------------------CCcEEEecccccc
Confidence 3457888888777652 36799999999999999999999987 4999999999999
Q ss_pred CCCCCCCCC-------------CCCCHHHHHHHHHHHHHHhC-----CccEEEEEEChhHHHHHHHHHhCCcccceEEEe
Q 015550 97 GRSSVPVKK-------------TEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (405)
Q Consensus 97 G~S~~~~~~-------------~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 158 (405)
|.|...... ...+.+..++|+.++++.+. .++++++||||||.+++.+|..+| +++++++
T Consensus 67 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~ 144 (236)
T 1zi8_A 67 QAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGY 144 (236)
T ss_dssp TSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEE
T ss_pred CCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEe
Confidence 988643211 13467788999999999886 468999999999999999999998 9999988
Q ss_pred ccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccch
Q 015550 159 NVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238 (405)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (405)
.+... .
T Consensus 145 ~~~~~--------~------------------------------------------------------------------ 150 (236)
T 1zi8_A 145 YGVGL--------E------------------------------------------------------------------ 150 (236)
T ss_dssp SCSSG--------G------------------------------------------------------------------
T ss_pred cCccc--------c------------------------------------------------------------------
Confidence 76410 0
Q ss_pred hhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC--CCeEEEEcCC-CccccccCH--------
Q 015550 239 GQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY--PVARMIDLPG-GHLVSHERT-------- 307 (405)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~--~~~~l~~~~g-gH~~~~e~p-------- 307 (405)
+....+..+++|+++++|++|.++|++..+.+.+.+. ++++++++++ ||....+.+
T Consensus 151 -------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 217 (236)
T 1zi8_A 151 -------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAA 217 (236)
T ss_dssp -------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHH
T ss_pred -------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHH
Confidence 0112345677999999999999999999999998883 4889999997 998876643
Q ss_pred HHHHHHHHHHHHhhcC
Q 015550 308 EEVNQALIDLIKASEK 323 (405)
Q Consensus 308 ~~v~~~i~~fl~~~~~ 323 (405)
+++.+.+.+||++...
T Consensus 218 ~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 218 ALANERTLDFLVPLQS 233 (236)
T ss_dssp HHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5788999999987653
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=200.93 Aligned_cols=249 Identities=9% Similarity=0.032 Sum_probs=155.4
Q ss_pred cccCCEEEEE--EEccCCC-CeEEEEecCCCCCCchhhhH--hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIKIFY--RTYGRGP-TKVILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~i~y--~~~G~~~-p~vvllHG~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
+..+|..+.. ...+.++ |+||++||++++...|.... ..+.. ||.|+++|+|
T Consensus 140 i~~~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~-----------------------g~~vi~~D~~ 196 (405)
T 3fnb_A 140 VPFEGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEH-----------------------DYNVLMVDLP 196 (405)
T ss_dssp EEETTEEEEEEEECCSSSCCCEEEEECCSSCCHHHHHHHTHHHHHHT-----------------------TCEEEEECCT
T ss_pred EeECCeEEEEEEEcCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHhC-----------------------CcEEEEEcCC
Confidence 5557777763 3334444 78999999999998887655 33444 9999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
|+|.|..... .+.. ++.+|+.++++.+.. ++++++||||||.+++.+|..+| +|+++|++++... ..
T Consensus 197 G~G~s~~~~~--~~~~-~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~-------~~ 265 (405)
T 3fnb_A 197 GQGKNPNQGL--HFEV-DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYD-------VA 265 (405)
T ss_dssp TSTTGGGGTC--CCCS-CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSC-------HH
T ss_pred CCcCCCCCCC--CCCc-cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCC-------HH
Confidence 9999964432 2222 457888888888876 79999999999999999999999 9999999987631 11
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
.. . ...+.... ...........................+...+.... ....+...... .
T Consensus 266 ~~-~---~~~~~~~~-------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----~ 324 (405)
T 3fnb_A 266 EV-F---RISFSTAL-------KAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVD------FITSVNEVLEQ----A 324 (405)
T ss_dssp HH-H---HHHCC-------------------------CCCHHHHHHHHHHHHHHTSSS------HHHHHHHHHHH----C
T ss_pred HH-H---HHhhhhhh-------hCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCC------HHHHHHHHHHh----h
Confidence 10 0 00000000 000000000000000000000111111111111100 00111111000 0
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEc---CC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDL---PG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~---~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
....+.++++|+|+|+|++|.+++++.++.+++.+ .++++++++ ++ ||+++.++++++++.|.+||++...
T Consensus 325 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 325 QIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp CCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred cccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 01115778899999999999999999999999988 446789999 55 6888899999999999999998753
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=185.36 Aligned_cols=180 Identities=17% Similarity=0.195 Sum_probs=138.7
Q ss_pred ccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe-------------------c
Q 015550 32 YGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF-------------------D 92 (405)
Q Consensus 32 ~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~-------------------D 92 (405)
.++..|+||++||++++...|..+++.|.. .||.|+++ |
T Consensus 19 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~v~~~~~~~~~~~~~~~~~~~~w~d 76 (232)
T 1fj2_A 19 ARKATAAVIFLHGLGDTGHGWAEAFAGIRS----------------------SHIKYICPHAPVRPVTLNMNVAMPSWFD 76 (232)
T ss_dssp SSCCSEEEEEECCSSSCHHHHHHHHHTTCC----------------------TTEEEEECCCCEEEEGGGTTEEEECSSC
T ss_pred CCCCCceEEEEecCCCccchHHHHHHHHhc----------------------CCcEEEecCCCccccccccccccccccc
Confidence 344567899999999999999999998886 49999997 6
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
++|+ .+..+. ...++++.++++.++++.+ +. ++++++||||||.+|+.+|.++|++++++|++++.......
T Consensus 77 ~~g~-~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~ 153 (232)
T 1fj2_A 77 IIGL-SPDSQE--DESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS 153 (232)
T ss_dssp BCCC-STTCCB--CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG
T ss_pred cccC-Cccccc--ccHHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc
Confidence 6776 332222 3567888999999999987 65 79999999999999999999999999999999986311000
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
. ..
T Consensus 154 ~-----------------------------------------~~------------------------------------ 156 (232)
T 1fj2_A 154 F-----------------------------------------PQ------------------------------------ 156 (232)
T ss_dssp S-----------------------------------------CS------------------------------------
T ss_pred c-----------------------------------------cc------------------------------------
Confidence 0 00
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-----CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-----PVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
....+..+++|+++++|++|.+++++.++++.+.+. ++.+++++++ ||....+.+ +.+.+||++.
T Consensus 157 -----~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~----~~i~~~l~~~ 227 (232)
T 1fj2_A 157 -----GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEM----MDVKQFIDKL 227 (232)
T ss_dssp -----SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHH----HHHHHHHHHH
T ss_pred -----cccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHH----HHHHHHHHHh
Confidence 001234567999999999999999999988887763 5699999998 999854433 5666777665
Q ss_pred c
Q 015550 322 E 322 (405)
Q Consensus 322 ~ 322 (405)
.
T Consensus 228 l 228 (232)
T 1fj2_A 228 L 228 (232)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-23 Score=190.60 Aligned_cols=217 Identities=12% Similarity=0.104 Sum_probs=148.1
Q ss_pred cCCCCeEEEEecC--CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 33 GRGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 33 G~~~p~vvllHG~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
+.+.|+|||+||+ +++...|..+++.|.. +|+|+++|+||||.|..+ ..++
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L~~-----------------------~~~v~~~d~~G~G~~~~~----~~~~ 130 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEELDA-----------------------GRRVSALVPPGFHGGQAL----PATL 130 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHHCT-----------------------TSEEEEEECTTSSTTCCE----ESSH
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHhCC-----------------------CceEEEeeCCCCCCCCCC----CCCH
Confidence 4455679999996 6678899999999965 999999999999987543 3489
Q ss_pred HHHHHHHHHHHHHh-CCccEEEEEEChhHHHHHHHHHhC---CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc
Q 015550 111 KIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (405)
Q Consensus 111 ~~~~~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (405)
+++++++.++++.+ +.++++|+||||||.+|+.+|.++ |++|+++|++++....... ................
T Consensus 131 ~~~~~~~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~- 207 (319)
T 3lcr_A 131 TVLVRSLADVVQAEVADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG--GRPEELFRSALNERFV- 207 (319)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC--CHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc--hhhHHHHHHHHHHHHh-
Confidence 99999999998877 568999999999999999999988 8889999999987532210 0000000000000000
Q ss_pred ChhhhhccCcccccCHhHHHhhhCCC--chhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcE
Q 015550 187 TPEKRAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (405)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (405)
....+.... .........+...+ .. .....+++|+
T Consensus 208 -----------------~~~~~~~~~~~~~~l~~~~~~~~~~------------------------~~--~~~~~i~~Pv 244 (319)
T 3lcr_A 208 -----------------EYLRLTGGGNLSQRITAQVWCLELL------------------------RG--WRPEGLTAPT 244 (319)
T ss_dssp -----------------HHHHHHCCCCHHHHHHHHHHHHHHT------------------------TT--CCCCCCSSCE
T ss_pred -----------------hhhcccCCCchhHHHHHHHHHHHHH------------------------hc--CCCCCcCCCE
Confidence 000000000 00000001110000 00 0114678999
Q ss_pred EEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCcccccc--CHHHHHHHHHHHHHhhcC
Q 015550 265 SVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHE--RTEEVNQALIDLIKASEK 323 (405)
Q Consensus 265 lvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e--~p~~v~~~i~~fl~~~~~ 323 (405)
|+|+|++| .+++.....+.+.+....++++++|+|+.+++ +++++++.|.+||++...
T Consensus 245 Lli~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 245 LYVRPAQP-LVEQEKPEWRGDVLAAMGQVVEAPGDHFTIIEGEHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp EEEEESSC-SSSCCCTHHHHHHHHTCSEEEEESSCTTGGGSTTTHHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCC-CCCcccchhhhhcCCCCceEEEeCCCcHHhhCcccHHHHHHHHHHHHHhccc
Confidence 99999885 45556667777777566899999999998886 999999999999998764
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-23 Score=180.28 Aligned_cols=179 Identities=16% Similarity=0.153 Sum_probs=138.5
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC------------------
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR------------------ 94 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~------------------ 94 (405)
++..|+||++||++++...|..+++.|.+.. +||.|+++|+|
T Consensus 11 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~--------------------~g~~v~~~d~p~~~~~~~~g~~~~~w~d~ 70 (218)
T 1auo_A 11 KPADACVIWLHGLGADRYDFMPVAEALQESL--------------------LTTRFVLPQAPTRPVTINGGYEMPSWYDI 70 (218)
T ss_dssp SCCSEEEEEECCTTCCTTTTHHHHHHHHTTC--------------------TTEEEEECCCCEEEEGGGTTEEEECSSCE
T ss_pred CCCCcEEEEEecCCCChhhHHHHHHHHhhcC--------------------CceEEEeCCCCCccccCCCCCcccceecC
Confidence 3456789999999999999999999998400 19999998766
Q ss_pred -CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC--ccEEEEEEChhHHHHHHHHH-hCCcccceEEEeccCCCCCCC
Q 015550 95 -GMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAA-MVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 95 -G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~ 167 (405)
|+|.+.. ....++++.++++.++++++ +. ++++++||||||.+|+.+|. ++|++++++|++++.... .
T Consensus 71 ~g~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~-~- 145 (218)
T 1auo_A 71 KAMSPARS---ISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT-F- 145 (218)
T ss_dssp EECSSSCE---ECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT-C-
T ss_pred cCCCcccc---cchHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC-c-
Confidence 4554321 12456788899999999987 44 48999999999999999999 999999999999986311 0
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
.....
T Consensus 146 ---------------------------~~~~~------------------------------------------------ 150 (218)
T 1auo_A 146 ---------------------------GDELE------------------------------------------------ 150 (218)
T ss_dssp ---------------------------CTTCC------------------------------------------------
T ss_pred ---------------------------hhhhh------------------------------------------------
Confidence 00000
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC---CeEEEEcCCCccccccCHHHHHHHHHHHH
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPGGHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~---~~~l~~~~ggH~~~~e~p~~v~~~i~~fl 318 (405)
. ....+++|+++++|++|.++|++.++.+.+.+.. +++++++++||..+.+.++++.+.|.++|
T Consensus 151 -~------~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 151 -L------SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp -C------CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCCHHHHHHHHHHHHHHH
T ss_pred -h------hhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEecCCCccCHHHHHHHHHHHHHHh
Confidence 0 0134568999999999999999999999988833 58999999999998887777777766665
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=185.94 Aligned_cols=191 Identities=15% Similarity=0.103 Sum_probs=144.4
Q ss_pred CCCcccccCCEEEEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe-
Q 015550 15 APDAALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF- 91 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~- 91 (405)
..+.+++.+|.+++|...|+ +.|+||++||++++...|..++..|.+ ||.|+++
T Consensus 15 ~~e~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~-----------------------g~~v~~~~ 71 (226)
T 2h1i_A 15 TENLYFQSNAMMKHVFQKGKDTSKPVLLLLHGTGGNELDLLPLAEIVDS-----------------------EASVLSVR 71 (226)
T ss_dssp CCCHHHHHHSSSCEEEECCSCTTSCEEEEECCTTCCTTTTHHHHHHHHT-----------------------TSCEEEEC
T ss_pred ceeeeecCCCceeEEecCCCCCCCcEEEEEecCCCChhHHHHHHHHhcc-----------------------CceEEEec
Confidence 34566788999999999997 668899999999999999999999987 9999999
Q ss_pred -cCCCCCCCCCCCC--CCCCCHHHHHHHHH---HHH----HHh--CCccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 92 -DNRGMGRSSVPVK--KTEYTTKIMAKDVI---ALM----DHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 92 -D~~G~G~S~~~~~--~~~~~~~~~~~dl~---~~l----~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
|++|+|.|..... ...++..++.+++. +++ +.. +.++++++||||||.+++.+|..+|++++++|+++
T Consensus 72 ~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~ 151 (226)
T 2h1i_A 72 GNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHH 151 (226)
T ss_dssp CSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEES
T ss_pred CcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeC
Confidence 9999998753211 12345555554443 333 333 44799999999999999999999999999999999
Q ss_pred cCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchh
Q 015550 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (405)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
+...... .
T Consensus 152 ~~~~~~~--------------------------------------------------------------~---------- 159 (226)
T 2h1i_A 152 PMVPRRG--------------------------------------------------------------M---------- 159 (226)
T ss_dssp CCCSCSS--------------------------------------------------------------C----------
T ss_pred CCCCcCc--------------------------------------------------------------c----------
Confidence 8631100 0
Q ss_pred hhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC---CeEEEEcCC-CccccccCHHHHHHHHH
Q 015550 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~---~~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
.....+++|+++++|++|.+++.+..+.+.+.+.. +.++ ++++ ||....+. .+.+.
T Consensus 160 ---------------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~----~~~~~ 219 (226)
T 2h1i_A 160 ---------------QLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTMGE----VEKAK 219 (226)
T ss_dssp ---------------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHHH----HHHHH
T ss_pred ---------------ccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHH----HHHHH
Confidence 00122468999999999999999999999988832 4555 8888 99986544 45555
Q ss_pred HHHHh
Q 015550 316 DLIKA 320 (405)
Q Consensus 316 ~fl~~ 320 (405)
+||++
T Consensus 220 ~~l~~ 224 (226)
T 2h1i_A 220 EWYDK 224 (226)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=189.71 Aligned_cols=219 Identities=11% Similarity=0.093 Sum_probs=143.6
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
++++|||+||++++...|..+++ |.. +|+|+++|+||++.+..+ .+++++++
T Consensus 20 ~~~~lv~lhg~~~~~~~~~~~~~-l~~-----------------------~~~v~~~d~~G~~~~~~~----~~~~~~~~ 71 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAFSYASLPR-LKS-----------------------DTAVVGLNCPYARDPENM----NCTHGAMI 71 (265)
T ss_dssp SSEEEEEECCTTCCGGGGTTSCC-CSS-----------------------SEEEEEEECTTTTCGGGC----CCCHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHh-cCC-----------------------CCEEEEEECCCCCCCCCC----CCCHHHHH
Confidence 34579999999999999999988 865 999999999999766533 46899999
Q ss_pred HHHHHHHHHhC-CccEEEEEEChhHHHHHHHHH---hCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhh
Q 015550 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAA---MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (405)
Q Consensus 115 ~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (405)
+++.++++.+. .++++|+||||||.+|+.+|. .+|++|.++|++++..+.... ... .........+.......
T Consensus 72 ~~~~~~i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~ 148 (265)
T 3ils_A 72 ESFCNEIRRRQPRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAME--QLP-RAFYEHCNSIGLFATQP 148 (265)
T ss_dssp HHHHHHHHHHCSSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCC--CCC-HHHHHHHHHTTTTTTSS
T ss_pred HHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccc--ccC-HHHHHHHHHHHHhCCCc
Confidence 99999999985 469999999999999999998 678889999999976532211 111 11111111111100000
Q ss_pred hhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEE-EEee
Q 015550 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS-VIHG 269 (405)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl-vi~G 269 (405)
.......... .++ ....+...+.. . ... .......++||++ +++|
T Consensus 149 ~~~~~~~~~~-~~~-------------~~~~~~~~~~~---------------~--~~~---~~~~~~~i~~P~~lii~G 194 (265)
T 3ils_A 149 GASPDGSTEP-PSY-------------LIPHFTAVVDV---------------M--LDY---KLAPLHARRMPKVGIVWA 194 (265)
T ss_dssp SSCSSSCSCC-CTT-------------HHHHHHHHHHH---------------T--TTC---CCCCCCCSSCCEEEEEEE
T ss_pred cccccCCHHH-HHH-------------HHHHHHHHHHH---------------H--Hhc---CCCCCccCCCCeEEEEEc
Confidence 0000000000 000 00000000000 0 000 0011236789988 9999
Q ss_pred cC---CccC--------------CHHHHHHHHHHhC-CCeEEEEcCC-Ccccc--ccCHHHHHHHHHHHH
Q 015550 270 RH---DVIA--------------QICYARRLAEKLY-PVARMIDLPG-GHLVS--HERTEEVNQALIDLI 318 (405)
Q Consensus 270 ~~---D~~~--------------~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~--~e~p~~v~~~i~~fl 318 (405)
++ |..+ +......+.+... +++++++++| ||+.+ .++++++++.|.+||
T Consensus 195 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 195 ADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred cCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 99 9987 3444455666543 4899999999 99999 899999999999997
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-22 Score=175.64 Aligned_cols=184 Identities=18% Similarity=0.215 Sum_probs=140.5
Q ss_pred cCCEEEEEEEccC--C----CCeEEEEecCC---C--CCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 22 DNGIKIFYRTYGR--G----PTKVILITGLA---G--THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 22 ~~g~~i~y~~~G~--~----~p~vvllHG~~---~--~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+| ++.+..+.+ . .|+||++||++ + ....|..+++.|.+ +||.|++
T Consensus 18 ~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~g~~v~~ 74 (220)
T 2fuk_A 18 PVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRE----------------------LGITVVR 74 (220)
T ss_dssp TTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHT----------------------TTCEEEE
T ss_pred CCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHH----------------------CCCeEEE
Confidence 344 666544432 2 56899999953 3 22346788888887 4999999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
+|+||+|.|..... .....++|+.++++.+ +.++++++||||||.+++.++..+ +|+++|++++......
T Consensus 75 ~d~~g~g~s~~~~~----~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~ 148 (220)
T 2fuk_A 75 FNFRSVGTSAGSFD----HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD 148 (220)
T ss_dssp ECCTTSTTCCSCCC----TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC
T ss_pred EecCCCCCCCCCcc----cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh
Confidence 99999999976542 1244566666666655 445899999999999999999987 8999999998732110
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
+
T Consensus 149 -----------------------------------------------------------~-------------------- 149 (220)
T 2fuk_A 149 -----------------------------------------------------------F-------------------- 149 (220)
T ss_dssp -----------------------------------------------------------C--------------------
T ss_pred -----------------------------------------------------------h--------------------
Confidence 0
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
+.+. ..+|+++++|++|.++|++.++++.+.+.++++++++++ ||.... +++++.+.+.+|+++...
T Consensus 150 --------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 150 --------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp --------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGGCS
T ss_pred --------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHHhh
Confidence 0001 147999999999999999999999998768899999998 999877 588999999999987653
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-24 Score=195.80 Aligned_cols=182 Identities=16% Similarity=0.196 Sum_probs=144.2
Q ss_pred CEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 24 g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
+..++|...+++.|+||++||++++...|..+++.|.+ +||.|+++|+||+|.|....
T Consensus 84 ~~~~~~p~~~~~~p~vv~~HG~~~~~~~~~~~~~~la~----------------------~G~~vv~~d~~g~g~s~~~~ 141 (306)
T 3vis_A 84 GGTIYYPRENNTYGAIAISPGYTGTQSSIAWLGERIAS----------------------HGFVVIAIDTNTTLDQPDSR 141 (306)
T ss_dssp CEEEEEESSCSCEEEEEEECCTTCCHHHHHHHHHHHHT----------------------TTEEEEEECCSSTTCCHHHH
T ss_pred ceEEEeeCCCCCCCEEEEeCCCcCCHHHHHHHHHHHHh----------------------CCCEEEEecCCCCCCCcchH
Confidence 45677766666567899999999999999999999988 49999999999999884211
Q ss_pred CCCCCCHHHHHHHHHHHHH--------HhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 104 KKTEYTTKIMAKDVIALMD--------HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~--------~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
.++..+.+..+.+ .++.++++++||||||.+++.+|..+|+ ++++|++++...
T Consensus 142 ------~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------ 202 (306)
T 3vis_A 142 ------ARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------ 202 (306)
T ss_dssp ------HHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------
T ss_pred ------HHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------
Confidence 1222222222222 2345689999999999999999999997 999999987521
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
..
T Consensus 203 ------------------------------------------------------------------------------~~ 204 (306)
T 3vis_A 203 ------------------------------------------------------------------------------NK 204 (306)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred hhhhcCCcEEEEeecCCccCCHH-HHHHHHHHhCC--CeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYP--VARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~-~~~~l~~~l~~--~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
.+..+++|+++++|++|.++|++ ..+.+.+.+.. +.+++++++ ||..+.+.++++.+.+.+||++....
T Consensus 205 ~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~l~~ 277 (306)
T 3vis_A 205 SWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAWLKRFVDE 277 (306)
T ss_dssp CCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHHHHHHccC
Confidence 23456799999999999999998 58999988744 678999998 99999999999999999999987643
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-22 Score=191.55 Aligned_cols=226 Identities=15% Similarity=0.098 Sum_probs=158.3
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+..+|.+|.+..+.+ ..|+||++||++++...|......|.. +||.|+++|+||
T Consensus 132 ~~~dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~rG 189 (386)
T 2jbw_A 132 LVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLD----------------------RGMATATFDGPG 189 (386)
T ss_dssp EEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHH----------------------TTCEEEEECCTT
T ss_pred EEeCCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHHHHHHHHh----------------------CCCEEEEECCCC
Confidence 445899998777643 236789999999988877666777766 499999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
+|.|.... ....++++.+.++.+++.. ++.++++++|||+||.+++.+|.. |++++++|++ +............
T Consensus 190 ~G~s~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~~~ 266 (386)
T 2jbw_A 190 QGEMFEYK-RIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDLET 266 (386)
T ss_dssp SGGGTTTC-CSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGGSC
T ss_pred CCCCCCCC-CCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHhcc
Confidence 99983222 2366888888999999888 556799999999999999999999 8899999999 6532111110000
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
. .. ............. ....... +.. .+
T Consensus 267 ~-~~-------------------------~~~~~~~~g~~~~-~~~~~~~----------------------~~~---~~ 294 (386)
T 2jbw_A 267 P-LT-------------------------KESWKYVSKVDTL-EEARLHV----------------------HAA---LE 294 (386)
T ss_dssp H-HH-------------------------HHHHHHHTTCSSH-HHHHHHH----------------------HHH---TC
T ss_pred H-HH-------------------------HHHHHHHhCCCCH-HHHHHHH----------------------HHh---CC
Confidence 0 00 0000000111000 0000000 000 01
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh-CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
....+.++++|+|+++|++|. ++++.++.+++.+ ..+++++++++ ||.. .++++++.+.|.+||++....
T Consensus 295 ~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~l~~ 366 (386)
T 2jbw_A 295 TRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLVA 366 (386)
T ss_dssp CTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHTS
T ss_pred hhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHhcCC
Confidence 123456778999999999999 8999999999987 44899999998 8964 678889999999999987653
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-24 Score=192.03 Aligned_cols=217 Identities=18% Similarity=0.207 Sum_probs=130.5
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
.+++|||+||++++...|.++++.|.+ +|+|+++|+||||.|..+. .+++.
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~GhG~S~~~~------~~~~~ 62 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQG-----------------------ECEMLAAEPPGHGTNQTSA------IEDLE 62 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHCC-----------------------SCCCEEEECCSSCCSCCCT------TTHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCCC-----------------------CeEEEEEeCCCCCCCCCCC------cCCHH
Confidence 446799999999999999999999987 8999999999999996432 23444
Q ss_pred HHHHHHHHHhCC---ccEEEEEEChhHHHHHHHHHh------CCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhc
Q 015550 115 KDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAM------VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (405)
Q Consensus 115 ~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (405)
+.+.++++.++. ++++|+||||||.+|+.+|.+ +|++ +++.+...+...... ............+.
T Consensus 63 ~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~-~~~~~~~~~~~~~~- 137 (242)
T 2k2q_B 63 ELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKK-VSHLPDDQFLDHII- 137 (242)
T ss_dssp HHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCC-CSSCTTHHHHHTTC-
T ss_pred HHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCccc-ccCCCHHHHHHHHH-
Confidence 555555556665 689999999999999999987 5554 343332211110000 00000000000000
Q ss_pred cChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEE
Q 015550 186 KTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (405)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (405)
... ....+.. .. ....... ...+........ .. . ...+..+++|+|
T Consensus 138 ---------~~~-~~~~~~~--------~~----~~~~~~~-------~~~~~~~~~~~~--~~--~-~~~l~~i~~P~l 183 (242)
T 2k2q_B 138 ---------QLG-GMPAELV--------EN----KEVMSFF-------LPSFRSDYRALE--QF--E-LYDLAQIQSPVH 183 (242)
T ss_dssp ---------CTT-CCCCTTT--------HH----HHTTTTC-------CSCHHHHHHHHT--CC--C-CSCCTTCCCSEE
T ss_pred ---------HhC-CCChHHh--------cC----HHHHHHH-------HHHHHHHHHHHH--hc--c-cCCCCccCCCEE
Confidence 000 0000000 00 0000000 000000000000 00 0 112567899999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 266 vi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+|+|++|.+++ .....+.+. .++.+++++++||+++.|+|+++++.|.+|+++.
T Consensus 184 vi~G~~D~~~~-~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 184 VFNGLDDKKCI-RDAEGWKKW-AKDITFHQFDGGHMFLLSQTEEVAERIFAILNQH 237 (242)
T ss_dssp EEEECSSCCHH-HHHHHHHTT-CCCSEEEEEECCCSHHHHHCHHHHHHHHHHHHTT
T ss_pred EEeeCCCCcCH-HHHHHHHHH-hcCCeEEEEeCCceeEcCCHHHHHHHHHHHhhcc
Confidence 99999999865 445556554 4777888888999999999999999999999764
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=193.19 Aligned_cols=212 Identities=18% Similarity=0.186 Sum_probs=142.4
Q ss_pred CCCCeEEEEecCCCCC--CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 34 RGPTKVILITGLAGTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~--~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
.+.|+|||+||++++. ..|..+...|.. +|+|+++|+||||.|... .++++
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~----~~~~~ 117 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFTRLAGALRG-----------------------IAPVRAVPQPGYEEGEPL----PSSMA 117 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTHHHHHHTSS-----------------------SCCBCCCCCTTSSTTCCB----CSSHH
T ss_pred CCCCeEEEECCCcccCcHHHHHHHHHhcCC-----------------------CceEEEecCCCCCCCCCC----CCCHH
Confidence 3456899999999987 899999999987 899999999999998643 46899
Q ss_pred HHHHHHH-HHHHHhCCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccC
Q 015550 112 IMAKDVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT 187 (405)
Q Consensus 112 ~~~~dl~-~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (405)
++++++. .+++.++.++++|+||||||.+|+.+|.++| ++|+++|++++...... .........+.
T Consensus 118 ~~a~~~~~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~-------~~~~~~~~~~~--- 187 (300)
T 1kez_A 118 AVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQ-------DAMNAWLEELT--- 187 (300)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTC-------HHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcch-------hHHHHHHHHHH---
Confidence 9999988 4667788889999999999999999999998 48999999998742211 01111100000
Q ss_pred hhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEE
Q 015550 188 PEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (405)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi 267 (405)
........ .............+... . .. .....+++|+++|
T Consensus 188 ---~~~~~~~~----------~~~~~~~~~~~~~~~~~-----------------------~-~~--~~~~~i~~P~lii 228 (300)
T 1kez_A 188 ---ATLFDRET----------VRMDDTRLTALGAYDRL-----------------------T-GQ--WRPRETGLPTLLV 228 (300)
T ss_dssp ---GGGCCCCS----------SCCCHHHHHHHHHHHHH-----------------------T-TT--CCCCCCSCCBEEE
T ss_pred ---HHHHhCcC----------CccchHHHHHHHHHHHH-----------------------H-hc--CCCCCCCCCEEEE
Confidence 00000000 00000000000011000 0 00 0135678999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccc-cCHHHHHHHHHHHHHhhcC
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~-e~p~~v~~~i~~fl~~~~~ 323 (405)
+|+ |.++++.. ..+.+.+..+.++++++|||+.++ ++++++++.|.+||++...
T Consensus 229 ~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~ggH~~~~~e~~~~~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 229 SAG-EPMGPWPD-DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLGGGNS 283 (300)
T ss_dssp EES-SCSSCCCS-SCCSCCCSSCCEEEEESSCTTTSSSSCSHHHHHHHHHHHTCC--
T ss_pred EeC-CCCCCCcc-cchhhhcCCCCeEEEecCCChhhccccHHHHHHHHHHHHHhccC
Confidence 995 54555433 334444434579999999999997 8999999999999976543
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=178.69 Aligned_cols=176 Identities=18% Similarity=0.201 Sum_probs=135.1
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC------------------
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR------------------ 94 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~------------------ 94 (405)
++..|+||++||++++...|..+++.|.+.. +||.|+++|+|
T Consensus 21 ~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~--------------------~g~~v~~~d~p~~~~~~~~g~~~~~w~d~ 80 (226)
T 3cn9_A 21 PNADACIIWLHGLGADRTDFKPVAEALQMVL--------------------PSTRFILPQAPSQAVTVNGGWVMPSWYDI 80 (226)
T ss_dssp TTCCEEEEEECCTTCCGGGGHHHHHHHHHHC--------------------TTEEEEECCCCEEECGGGTSCEEECSSCB
T ss_pred CCCCCEEEEEecCCCChHHHHHHHHHHhhcC--------------------CCcEEEeecCCCCccccCCCCcccccccc
Confidence 3456789999999999999999999998200 19999997666
Q ss_pred -CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC--ccEEEEEEChhHHHHHHHHH-hCCcccceEEEeccCCCCCCC
Q 015550 95 -GMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAA-MVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 95 -G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~ 167 (405)
|+|.+.. ....++++.++++.++++.+ ++ ++++++||||||.+|+.+|. ++|++++++|++++....
T Consensus 81 ~g~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--- 154 (226)
T 3cn9_A 81 LAFSPARA---IDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPT--- 154 (226)
T ss_dssp CCSSSTTC---BCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGG---
T ss_pred cccccccc---ccchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCC---
Confidence 6664321 13567888999999999987 65 58999999999999999999 999999999999975200
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
.. . . .
T Consensus 155 ----~~---------------------------------~-~--------------------------~----------- 159 (226)
T 3cn9_A 155 ----FD---------------------------------D-L--------------------------A----------- 159 (226)
T ss_dssp ----GG---------------------------------G-C--------------------------C-----------
T ss_pred ----ch---------------------------------h-h--------------------------h-----------
Confidence 00 0 0 0
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC---CeEEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~---~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+ ....+++|+++++|++|.++|++.++.+.+.+.. +++++++++||.++.+.+++ +.+||++
T Consensus 160 -~------~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~~gH~~~~~~~~~----i~~~l~~ 224 (226)
T 3cn9_A 160 -L------DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYPMGHEVSLEEIHD----IGAWLRK 224 (226)
T ss_dssp -C------CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEESCCSSCCHHHHHH----HHHHHHH
T ss_pred -h------cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEecCCCCcchhhHHH----HHHHHHh
Confidence 0 0034568999999999999999999999988732 68999999899987766554 4555543
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-22 Score=187.09 Aligned_cols=265 Identities=14% Similarity=0.146 Sum_probs=153.7
Q ss_pred CCEEEEEEEc---c---CCCCeEEEEecCCCCCCchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 23 NGIKIFYRTY---G---RGPTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 23 ~g~~i~y~~~---G---~~~p~vvllHG~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+|..+.+..+ + ...|+||++||++++...|.. ++..|.+ +||.|+++|+||
T Consensus 77 ~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g 134 (367)
T 2hdw_A 77 YGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAE----------------------RGFVTLAFDPSY 134 (367)
T ss_dssp TSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHH----------------------TTCEEEEECCTT
T ss_pred CCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHH----------------------CCCEEEEECCCC
Confidence 5777776554 2 233679999999999998875 7888877 499999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC------
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG------ 163 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~------ 163 (405)
+|.|..... ...+....++|+.++++.+ +.++++++|||+||.+++.+|..+| +|+++|++++...
T Consensus 135 ~g~s~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~ 212 (367)
T 2hdw_A 135 TGESGGQPR-NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSK 212 (367)
T ss_dssp STTSCCSSS-SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHH
T ss_pred cCCCCCcCc-cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhh
Confidence 999975443 1234667788888877776 2468999999999999999999998 6999999986520
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCch-hHHHHHHHHhhhhhccc--cCcccchhh
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGISATGM--QSNYGFDGQ 240 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~ 240 (405)
+.... ........................... +.. .+..+...... .......+......... .....+...
T Consensus 213 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (367)
T 2hdw_A 213 GYNDS--VTLEQRTRTLEQLGQQRWKDAESGTPA--YQP-PYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMT 287 (367)
T ss_dssp TTTTC--CCHHHHHHHHHHHHHHHHHHHHHTSCC--BCS-CTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTT
T ss_pred hhccc--cchHHHHHHHHHHHHHHHHHhccCCce--eec-CCCccccccccccCCccceeecccccCcccccccchhhhh
Confidence 00000 000000000000000000000000000 000 00000000000 00111111110000000 000000000
Q ss_pred hHHhhhcccChhhhhhhhhcC-CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHH-HHHHHHHH
Q 015550 241 IHACWMHKMTQKDIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEE-VNQALIDL 317 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~-v~~~i~~f 317 (405)
....+ ...+....+.+++ +|+|+++|++|. +.+.++++++...++++++++++ ||..+.+.++. +.+.|.+|
T Consensus 288 ~~~~~---~~~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~f 362 (367)
T 2hdw_A 288 TPLSF---MNMPILTYIKEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGF 362 (367)
T ss_dssp THHHH---TTSCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHH
T ss_pred hHHHh---cCCChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHH
Confidence 00000 1112234567788 999999999999 88888888886667899999999 99988887765 58999999
Q ss_pred HHhh
Q 015550 318 IKAS 321 (405)
Q Consensus 318 l~~~ 321 (405)
|++.
T Consensus 363 l~~~ 366 (367)
T 2hdw_A 363 FDEH 366 (367)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9764
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.6e-23 Score=183.92 Aligned_cols=180 Identities=16% Similarity=0.101 Sum_probs=132.2
Q ss_pred EEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe--cCCCCCCCCCCCC
Q 015550 28 FYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF--DNRGMGRSSVPVK 104 (405)
Q Consensus 28 ~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~--D~~G~G~S~~~~~ 104 (405)
++...+. ..|+||++||++++...|..+++.|.+ +|.|+++ |++|+|.|.....
T Consensus 53 ~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~~~d~~g~g~s~~~~~ 109 (251)
T 2r8b_A 53 HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLP-----------------------QATILSPVGDVSEHGAARFFRR 109 (251)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHST-----------------------TSEEEEECCSEEETTEEESSCB
T ss_pred EEEeCCCCCCcEEEEEeCCCCCHhHHHHHHHhcCC-----------------------CceEEEecCCcCCCCCcccccC
Confidence 3344443 557899999999999999999999987 7999999 8999998753221
Q ss_pred --CCCCCH---HHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 105 --KTEYTT---KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 105 --~~~~~~---~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
...++. .+.++|+.++++.+ +.++++++||||||.+++.+|.++|++++++|++++......
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------- 180 (251)
T 2r8b_A 110 TGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------- 180 (251)
T ss_dssp CGGGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------
Confidence 012333 33355665555554 788999999999999999999999999999999998631100
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
. .
T Consensus 181 ----------------------------------------------------~--------------------------~ 182 (251)
T 2r8b_A 181 ----------------------------------------------------K--------------------------I 182 (251)
T ss_dssp ----------------------------------------------------C--------------------------C
T ss_pred ----------------------------------------------------c--------------------------c
Confidence 0 0
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC-CeEEE-EcCC-CccccccCHHHHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-VARMI-DLPG-GHLVSHERTEEVNQALIDL 317 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-~~~l~-~~~g-gH~~~~e~p~~v~~~i~~f 317 (405)
....+++|+|+++|++|.+++++.++.+.+.+.. +.++. .+++ ||.++.+.++++.+.|.++
T Consensus 183 ~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 183 SPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAY 247 (251)
T ss_dssp CCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHHGGG
T ss_pred cccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHHh
Confidence 0123468999999999999999999999998831 44544 5555 9999777665554444433
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=175.97 Aligned_cols=199 Identities=13% Similarity=0.079 Sum_probs=148.1
Q ss_pred cccCCEEEEEEEccC--C---CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIKIFYRTYGR--G---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~--~---~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
+..+|..+.+..+.+ . .|+||++||++++...|..+++.|.+ +||.|+++|++
T Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~----------------------~G~~v~~~d~~ 68 (241)
T 3f67_A 11 IPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQ----------------------EGYLAIAPELY 68 (241)
T ss_dssp EEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHHHHHHHHHHHH----------------------TTCEEEEECTT
T ss_pred EecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCHHHHHHHHHHHH----------------------CCcEEEEeccc
Confidence 444788887666543 1 26899999999999899999999987 49999999999
Q ss_pred CCCCCCCCCCC---------CCCCHHHHHHHHHHHHHHhC-----CccEEEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 95 GMGRSSVPVKK---------TEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 95 G~G~S~~~~~~---------~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
|+|.+...... ...+.+...+|+.++++.+. .++++++||||||.+++.++..+|+ +.++|++.+
T Consensus 69 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~ 147 (241)
T 3f67_A 69 FRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYG 147 (241)
T ss_dssp TTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESC
T ss_pred ccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEec
Confidence 99877543321 12344567888888888763 4589999999999999999999986 777777665
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
....... .
T Consensus 148 ~~~~~~~-------------------------------~----------------------------------------- 155 (241)
T 3f67_A 148 KLVGEKS-------------------------------L----------------------------------------- 155 (241)
T ss_dssp CCSCCCC-------------------------------S-----------------------------------------
T ss_pred cccCCCc-------------------------------c-----------------------------------------
Confidence 4210000 0
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc--------CHH
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE--------RTE 308 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e--------~p~ 308 (405)
....+....+.++++|+++++|++|.++|++..+.+.+.+ .++++++++++ ||.+..+ ..+
T Consensus 156 -------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 228 (241)
T 3f67_A 156 -------NSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAK 228 (241)
T ss_dssp -------SSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHH
T ss_pred -------CCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHH
Confidence 0001112334667899999999999999999999998877 36899999998 9987632 346
Q ss_pred HHHHHHHHHHHh
Q 015550 309 EVNQALIDLIKA 320 (405)
Q Consensus 309 ~v~~~i~~fl~~ 320 (405)
++.+.+.+||++
T Consensus 229 ~~~~~~~~fl~~ 240 (241)
T 3f67_A 229 DGWQRMLAWFAQ 240 (241)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 788889999864
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=183.75 Aligned_cols=188 Identities=13% Similarity=0.067 Sum_probs=140.5
Q ss_pred CCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 34 RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 34 ~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
.+.|+|||+||.+ ++...|..+++.|.+ +||.|+++|+||+|. .+.
T Consensus 61 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~~~~~---------~~~ 109 (262)
T 2pbl_A 61 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALS----------------------KGWAVAMPSYELCPE---------VRI 109 (262)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHH----------------------TTEEEEEECCCCTTT---------SCH
T ss_pred CCCCEEEEEcCcccccCChHHHHHHHHHHHh----------------------CCCEEEEeCCCCCCC---------CCh
Confidence 3457899999954 777889999999876 499999999999864 367
Q ss_pred HHHHHHHHHHHHHhCC---ccEEEEEEChhHHHHHHHHHhC------CcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 111 KIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
.++++|+.++++.+.. ++++|+||||||.+|+.+|..+ |++|+++|++++..... ....
T Consensus 110 ~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~----~~~~-------- 177 (262)
T 2pbl_A 110 SEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLR----PLLR-------- 177 (262)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCG----GGGG--------
T ss_pred HHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCch----HHHh--------
Confidence 8889999988888754 5999999999999999999988 89999999999763110 0000
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcC
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (405)
.+......... ..+ .. ......+..++
T Consensus 178 ---------------------~~~~~~~~~~~------~~~-~~-------------------------~~~~~~~~~~~ 204 (262)
T 2pbl_A 178 ---------------------TSMNEKFKMDA------DAA-IA-------------------------ESPVEMQNRYD 204 (262)
T ss_dssp ---------------------STTHHHHCCCH------HHH-HH-------------------------TCGGGCCCCCS
T ss_pred ---------------------hhhhhhhCCCH------HHH-Hh-------------------------cCcccccCCCC
Confidence 00000000000 000 00 00112345678
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
+|+++++|++|.+++++.++.+++.+ + ++++++++ ||+.+.+++++.+..+.+++-
T Consensus 205 ~P~lii~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 205 AKVTVWVGGAERPAFLDQAIWLVEAW-D-ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp CEEEEEEETTSCHHHHHHHHHHHHHH-T-CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred CCEEEEEeCCCCcccHHHHHHHHHHh-C-CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 99999999999999999999999998 5 99999998 999999998888888877763
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=176.81 Aligned_cols=217 Identities=12% Similarity=0.017 Sum_probs=150.2
Q ss_pred CcccccCCEEEEEEEccCC-------CCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCe
Q 015550 17 DAALNDNGIKIFYRTYGRG-------PTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~-------~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~ 86 (405)
.++...+|..+.+....+. .|+||++||.+ ++...|..++..|.+ +||
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~ 74 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLA----------------------QGY 74 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHH----------------------TTC
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHH----------------------CCC
Confidence 3445567888877655432 37899999943 556678888888886 499
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---------CCccEEEEEEChhHHHHHHHHHh-CCcccceEE
Q 015550 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---------GWKQAHVFGHSMGAMIACKLAAM-VPERVLSLA 156 (405)
Q Consensus 87 ~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---------~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lv 156 (405)
.|+++|+||+|.|... .+.....+|+.++++.+ +.++++++||||||.+++.+|.. .+.+++++|
T Consensus 75 ~v~~~d~~g~g~s~~~-----~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v 149 (276)
T 3hxk_A 75 QVLLLNYTVMNKGTNY-----NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVI 149 (276)
T ss_dssp EEEEEECCCTTSCCCS-----CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEE
T ss_pred EEEEecCccCCCcCCC-----CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEE
Confidence 9999999999997632 23445555655555443 23589999999999999999988 788999999
Q ss_pred EeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCccc
Q 015550 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (405)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (405)
++++........+... .. ..++.. .
T Consensus 150 ~~~p~~~~~~~~~~~~----------------------~~---------~~~~~~------------------------~ 174 (276)
T 3hxk_A 150 LCYPVTSFTFGWPSDL----------------------SH---------FNFEIE------------------------N 174 (276)
T ss_dssp EEEECCBTTSSCSSSS----------------------SS---------SCCCCS------------------------C
T ss_pred EecCcccHHhhCCcch----------------------hh---------hhcCch------------------------h
Confidence 9998642111100000 00 000000 0
Q ss_pred chhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCH-----
Q 015550 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERT----- 307 (405)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p----- 307 (405)
. ...+....+..+.+|+|+++|++|.++|++.++.+.+.+ ..+++++++++ ||.+....+
T Consensus 175 ~-----------~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 243 (276)
T 3hxk_A 175 I-----------SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPS 243 (276)
T ss_dssp C-----------GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSS
T ss_pred h-----------hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCcccccc
Confidence 0 000112334567899999999999999999999998877 24569999998 997776544
Q ss_pred --------HHHHHHHHHHHHhhcCCCC
Q 015550 308 --------EEVNQALIDLIKASEKKIS 326 (405)
Q Consensus 308 --------~~v~~~i~~fl~~~~~~~~ 326 (405)
+++.+.+.+||++......
T Consensus 244 ~~~~~~~~~~~~~~~~~wl~~~~~~~~ 270 (276)
T 3hxk_A 244 DAYCLPSVHRWVSWASDWLERQIKNLE 270 (276)
T ss_dssp STTCCHHHHTHHHHHHHHHHHHHHTTC
T ss_pred ccccCchHHHHHHHHHHHHHhCccccc
Confidence 6788899999998875443
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-21 Score=175.65 Aligned_cols=203 Identities=15% Similarity=0.106 Sum_probs=138.6
Q ss_pred CCCeEEEEecCC-----CCCCchhhhHhhh----cCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 35 GPTKVILITGLA-----GTHDAWGPQLKGL----AGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 35 ~~p~vvllHG~~-----~~~~~~~~~~~~L----~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
+.|+|||+||.+ ++...|..++..| .. .||.|+++|+|+.+.+..
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~----------------------~g~~vi~~d~r~~~~~~~---- 93 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTE----------------------STVCQYSIEYRLSPEITN---- 93 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTT----------------------CCEEEEEECCCCTTTSCT----
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhcc----------------------CCcEEEEeecccCCCCCC----
Confidence 457899999965 3566899999988 33 399999999998765432
Q ss_pred CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC-----------------CcccceEEEeccCCCCCCCC
Q 015550 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-----------------PERVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----------------p~~v~~lvl~~~~~~~~~~~ 168 (405)
...++++.+.+..++++++.++++|+||||||.+|+.+|.++ |++|+++|++++..
T Consensus 94 -~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~------ 166 (273)
T 1vkh_A 94 -PRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIY------ 166 (273)
T ss_dssp -THHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCC------
T ss_pred -CcHHHHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccc------
Confidence 335677777888888888889999999999999999999986 78999999998752
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
....... . .. ....+....+.... . .+......
T Consensus 167 ---~~~~~~~---~----~~-----------~~~~~~~~~~~~~~---------------~------~~~~~~~~----- 199 (273)
T 1vkh_A 167 ---SLKELLI---E----YP-----------EYDCFTRLAFPDGI---------------Q------MYEEEPSR----- 199 (273)
T ss_dssp ---CHHHHHH---H----CG-----------GGHHHHHHHCTTCG---------------G------GCCCCHHH-----
T ss_pred ---cHHHhhh---h----cc-----------cHHHHHHHHhcccc---------------c------chhhcccc-----
Confidence 1100000 0 00 00001111100000 0 00000000
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-CccccccCHHHHHHHHHHHH
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl 318 (405)
...........+++|+|+++|++|.++|++.++.+++.+. .+++++++++ ||..++++ +++.+.|.+||
T Consensus 200 ~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 200 VMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred cChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 0000011233477999999999999999999999988772 3589999998 99999999 89999998886
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.4e-22 Score=171.23 Aligned_cols=186 Identities=10% Similarity=0.026 Sum_probs=123.7
Q ss_pred CeEEEEecCCCCCCchh--hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 37 TKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
|+|||+||++++...|. .+.+.+.... .+|+|+++|+||+|. +..
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~--------------------~~~~v~~pdl~~~g~-------------~~~ 49 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHH--------------------PHIEMQIPQLPPYPA-------------EAA 49 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHC--------------------TTSEEECCCCCSSHH-------------HHH
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcC--------------------CCcEEEEeCCCCCHH-------------HHH
Confidence 78999999999887764 2333443210 279999999999874 367
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhcc
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
+++..+++....++++|+||||||.+|+.+|.++|+.+..++...+.. ............
T Consensus 50 ~~l~~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~-- 109 (202)
T 4fle_A 50 EMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPF------------------ELLSDYLGENQN-- 109 (202)
T ss_dssp HHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHH------------------HHGGGGCEEEEC--
T ss_pred HHHHHHHHhcCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchH------------------HHHHHhhhhhcc--
Confidence 788888888888999999999999999999999998777666554320 000000000000
Q ss_pred CcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCcc
Q 015550 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (405)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~ 274 (405)
.... ............. ........++++|+|+|||++|.+
T Consensus 110 ----~~~~-------~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~P~LiihG~~D~~ 150 (202)
T 4fle_A 110 ----PYTG-------QKYVLESRHIYDL----------------------------KAMQIEKLESPDLLWLLQQTGDEV 150 (202)
T ss_dssp ----TTTC-------CEEEECHHHHHHH----------------------------HTTCCSSCSCGGGEEEEEETTCSS
T ss_pred ----cccc-------ccccchHHHHHHH----------------------------HhhhhhhhccCceEEEEEeCCCCC
Confidence 0000 0000000000000 001122356779999999999999
Q ss_pred CCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 275 ~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+|++.+.++. +++++++++| ||.+ ++++++.+.|.+||+-
T Consensus 151 Vp~~~s~~l~----~~~~l~i~~g~~H~~--~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 151 LDYRQAVAYY----TPCRQTVESGGNHAF--VGFDHYFSPIVTFLGL 191 (202)
T ss_dssp SCHHHHHHHT----TTSEEEEESSCCTTC--TTGGGGHHHHHHHHTC
T ss_pred CCHHHHHHHh----hCCEEEEECCCCcCC--CCHHHHHHHHHHHHhh
Confidence 9998876653 6789999998 8963 6677888999999964
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=188.20 Aligned_cols=232 Identities=12% Similarity=0.066 Sum_probs=150.3
Q ss_pred cccCCEEEEEEEccC----CCCeEEEEecCCCCCC-chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
+..+|..+....+.+ ..|+||++||++++.. .|..+...|.. +||.|+++|+|
T Consensus 173 i~~~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~----------------------~G~~V~~~D~~ 230 (415)
T 3mve_A 173 IPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAK----------------------HDIAMLTVDMP 230 (415)
T ss_dssp EECSSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGG----------------------GTCEEEEECCT
T ss_pred EEECCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHh----------------------CCCEEEEECCC
Confidence 445777776555532 2368999999998854 55566677766 49999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
|+|.|..... ..+.+.++.++.+++..+. .++++++||||||.+|+.+|..+|++|+++|++++.....
T Consensus 231 G~G~s~~~~~--~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~------ 302 (415)
T 3mve_A 231 SVGYSSKYPL--TEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDI------ 302 (415)
T ss_dssp TSGGGTTSCC--CSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHH------
T ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccc------
Confidence 9999976543 4456667777777777664 4689999999999999999999999999999999862110
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
.. ...+....... ....+............ .+...+. ......
T Consensus 303 ~~-----~~~~~~~~~~~-----------~~~~~~~~~g~~~~~~~---~~~~~~~------------------~~~~~~ 345 (415)
T 3mve_A 303 FA-----SPQKLQQMPKM-----------YLDVLASRLGKSVVDIY---SLSGQMA------------------AWSLKV 345 (415)
T ss_dssp HH-----CHHHHTTSCHH-----------HHHHHHHHTTCSSBCHH---HHHHHGG------------------GGCTTT
T ss_pred cc-----cHHHHHHhHHH-----------HHHHHHHHhCCCccCHH---HHHHHHh------------------hcCccc
Confidence 00 00000000000 00011111111000000 0000000 000000
Q ss_pred -hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhc
Q 015550 252 -KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 252 -~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
.... ..++++|+|+|+|++|.++|++.++.+.+.. ++++++++++++ .++.++++.+.+.+||++.-
T Consensus 346 ~~~~~-~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~-~~~~l~~i~g~~--~h~~~~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 346 QGFLS-SRKTKVPILAMSLEGDPVSPYSDNQMVAFFS-TYGKAKKISSKT--ITQGYEQSLDLAIKWLEDEL 413 (415)
T ss_dssp TTTTT-SSCBSSCEEEEEETTCSSSCHHHHHHHHHTB-TTCEEEEECCCS--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-cCCCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCceEEEecCCC--cccchHHHHHHHHHHHHHHh
Confidence 0001 3578899999999999999999999999864 899999999832 22477889999999998753
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=170.89 Aligned_cols=171 Identities=13% Similarity=0.013 Sum_probs=127.5
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec-------------CCCCCCCCC
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD-------------NRGMGRSSV 101 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D-------------~~G~G~S~~ 101 (405)
+.| ||++||++++...|..+++.|.. ++.|+++| ++|+|.+..
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~ 71 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIAP-----------------------SHPILSIRGRINEQGVNRYFKLRGLGGFTK 71 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHST-----------------------TCCEEEECCSBCGGGCCBSSCBCSCTTCSG
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcCC-----------------------CceEEEecCCcCCCCcccceeccccccccc
Confidence 456 99999999999999999999986 99999999 777777643
Q ss_pred CCCCCCCCHHHHHHHHHHHHH----HhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 102 PVKKTEYTTKIMAKDVIALMD----HLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~----~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
... ...+..+.++++.++++ ..++ ++++++||||||.+|+.+|.++|++++++|++++......
T Consensus 72 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------- 141 (209)
T 3og9_A 72 ENF-DLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF--------- 141 (209)
T ss_dssp GGB-CHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC---------
T ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc---------
Confidence 221 12234444555555554 4455 7899999999999999999999999999999997521000
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
..
T Consensus 142 ------------------------------------------------------------------------------~~ 143 (209)
T 3og9_A 142 ------------------------------------------------------------------------------EQ 143 (209)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.....++|+++++|++|.++|++.++++.+.+. ...+++++++||.+.. +..+.+.+||++.
T Consensus 144 ~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~l~~~ 208 (209)
T 3og9_A 144 TVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESSLGHQLTQ----EEVLAAKKWLTET 208 (209)
T ss_dssp CCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECSSTTSCCH----HHHHHHHHHHHHH
T ss_pred cccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcCCCCcCCH----HHHHHHHHHHHhh
Confidence 012345899999999999999999988888772 3477888888998743 3456677777653
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-21 Score=173.96 Aligned_cols=196 Identities=8% Similarity=0.009 Sum_probs=126.7
Q ss_pred CCeEEEEec---CCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 36 PTKVILITG---LAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 36 ~p~vvllHG---~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.|+||++|| ..++...|..++..|.+ +||.|+++|+||+|.+.. . .....++
T Consensus 35 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~g~~~~-~--~~~~~~d 89 (277)
T 3bxp_A 35 YPIMIICPGGGFTYHSGREEAPIATRMMA----------------------AGMHTVVLNYQLIVGDQS-V--YPWALQQ 89 (277)
T ss_dssp EEEEEEECCSTTTSCCCTTHHHHHHHHHH----------------------TTCEEEEEECCCSTTTCC-C--TTHHHHH
T ss_pred ccEEEEECCCccccCCCccchHHHHHHHH----------------------CCCEEEEEecccCCCCCc-c--CchHHHH
Confidence 468999999 66777789999999986 499999999999995432 1 1222333
Q ss_pred HHHHHHHHHH---HhCC--ccEEEEEEChhHHHHHHHHHhC--------------CcccceEEEeccCCCCCCCCccchh
Q 015550 113 MAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAMV--------------PERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 113 ~~~dl~~~l~---~l~~--~~v~lvGhS~Gg~ia~~~a~~~--------------p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
..+.+..+.+ .++. ++++++||||||.+|+.+|..+ |.+++++|++++..........
T Consensus 90 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~--- 166 (277)
T 3bxp_A 90 LGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFPT--- 166 (277)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSSSS---
T ss_pred HHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCCCC---
Confidence 3333332222 2333 5899999999999999999985 7789999999976311000000
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhh
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (405)
..... ..+.... ...+.
T Consensus 167 ----------------------------~~~~~-------------~~~~~~~----------------------~~~~~ 183 (277)
T 3bxp_A 167 ----------------------------TSAAR-------------NQITTDA----------------------RLWAA 183 (277)
T ss_dssp ----------------------------SHHHH-------------HHHCSCG----------------------GGSBG
T ss_pred ----------------------------ccccc-------------hhccchh----------------------hhcCH
Confidence 00000 0000000 00011
Q ss_pred hhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccC---------------HHHHHHHH
Q 015550 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHER---------------TEEVNQAL 314 (405)
Q Consensus 254 ~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~---------------p~~v~~~i 314 (405)
...+..+.+|+|+++|++|.++|++.++.+++.+ ..+++++++++ ||.+.... .+++.+.+
T Consensus 184 ~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (277)
T 3bxp_A 184 QRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLA 263 (277)
T ss_dssp GGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHH
T ss_pred hhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHH
Confidence 2234456789999999999999999998888876 34579999998 99555443 47888999
Q ss_pred HHHHHhhc
Q 015550 315 IDLIKASE 322 (405)
Q Consensus 315 ~~fl~~~~ 322 (405)
.+||++..
T Consensus 264 ~~fl~~~~ 271 (277)
T 3bxp_A 264 LRWLQEQG 271 (277)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcc
Confidence 99998764
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-20 Score=173.02 Aligned_cols=224 Identities=13% Similarity=0.026 Sum_probs=144.8
Q ss_pred cCCEEEEEEEccC----CCCeEEEEecCCCC-CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 22 DNGIKIFYRTYGR----GPTKVILITGLAGT-HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 22 ~~g~~i~y~~~G~----~~p~vvllHG~~~~-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+|.++.+..+.+ ..|+||++||++++ ...|.... .|.. +||.|+++|+||+
T Consensus 64 ~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~----------------------~g~~v~~~d~rg~ 120 (318)
T 1l7a_A 64 FGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMV-NWAL----------------------HGYATFGMLVRGQ 120 (318)
T ss_dssp GGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHH-HHHH----------------------TTCEEEEECCTTT
T ss_pred cCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCCccccc-chhh----------------------CCcEEEEecCCCC
Confidence 3677777655532 33679999999999 88887766 4444 3999999999999
Q ss_pred CCCCCCCC----------------CCCCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccce
Q 015550 97 GRSSVPVK----------------KTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLS 154 (405)
Q Consensus 97 G~S~~~~~----------------~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~ 154 (405)
|.|..... ...+.+...++|+.++++.+. .++++++|||+||.+|+.+|..+|+ +.+
T Consensus 121 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~ 199 (318)
T 1l7a_A 121 QRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKA 199 (318)
T ss_dssp SSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSE
T ss_pred CCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccE
Confidence 99975531 112335677888888777662 2689999999999999999999985 888
Q ss_pred EEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCc
Q 015550 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
+|++++.... ... ..... .... ......++... .. ..........
T Consensus 200 ~v~~~p~~~~--------~~~---~~~~~-~~~~---------~~~~~~~~~~~-~~----~~~~~~~~~~--------- 244 (318)
T 1l7a_A 200 AVADYPYLSN--------FER---AIDVA-LEQP---------YLEINSFFRRN-GS----PETEVQAMKT--------- 244 (318)
T ss_dssp EEEESCCSCC--------HHH---HHHHC-CSTT---------TTHHHHHHHHS-CC----HHHHHHHHHH---------
T ss_pred EEecCCcccC--------HHH---HHhcC-CcCc---------cHHHHHHHhcc-CC----cccHHHHHHh---------
Confidence 8887764211 000 00000 0000 00000000000 00 0000000000
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
....+....+..+++|+|+++|++|.++|++.++.+.+.+..+++++++++ ||.. ..++.+.
T Consensus 245 -------------~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~----~~~~~~~ 307 (318)
T 1l7a_A 245 -------------LSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY----IPAFQTE 307 (318)
T ss_dssp -------------HHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHH
T ss_pred -------------hccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCC----cchhHHH
Confidence 000122344567789999999999999999999999998855689999998 9983 3466777
Q ss_pred HHHHHHhh
Q 015550 314 LIDLIKAS 321 (405)
Q Consensus 314 i~~fl~~~ 321 (405)
+.+||++.
T Consensus 308 ~~~fl~~~ 315 (318)
T 1l7a_A 308 KLAFFKQI 315 (318)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888765
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=175.86 Aligned_cols=181 Identities=15% Similarity=0.085 Sum_probs=137.9
Q ss_pred EEEEEEEc----cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC
Q 015550 25 IKIFYRTY----GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (405)
Q Consensus 25 ~~i~y~~~----G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~ 100 (405)
..++|... |...|+|||+||++++...|..+++.|.+ +||.|+++|+||.+.
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~~s~~-- 89 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWAS----------------------HGFVVAAAETSNAGT-- 89 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCGGGGHHHHHHHHH----------------------HTCEEEEECCSCCTT--
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCchhHHHHHHHHHh----------------------CCeEEEEecCCCCcc--
Confidence 56666654 22457899999999999999999999987 499999999996311
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH--------HhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 101 VPVKKTEYTTKIMAKDVIALMD--------HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~--------~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
..+.....+.+.+... .++.++++++||||||.+++.+| .++++++++++++....
T Consensus 90 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~-------- 153 (258)
T 2fx5_A 90 ------GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG-------- 153 (258)
T ss_dssp ------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS--------
T ss_pred ------HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc--------
Confidence 1233344444444433 44557899999999999999988 56789999999864200
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
. . .
T Consensus 154 ---------------------~-----------------------------------------~---------------~ 156 (258)
T 2fx5_A 154 ---------------------L-----------------------------------------G---------------H 156 (258)
T ss_dssp ---------------------T-----------------------------------------T---------------C
T ss_pred ---------------------c-----------------------------------------c---------------c
Confidence 0 0 0
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHH-HHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~-~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
....+..+++|+|+|+|++|.+++++. .+.+.+....+++++++++ ||+.+.++++++.+.|.+||+...
T Consensus 157 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 157 DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQL 228 (258)
T ss_dssp CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHH
T ss_pred chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHHh
Confidence 011345678999999999999999986 8888887545689999998 999999999999999999998654
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-22 Score=180.45 Aligned_cols=196 Identities=12% Similarity=-0.000 Sum_probs=131.2
Q ss_pred CCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC--CCCCCCCCCH
Q 015550 36 PTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS--VPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~--~~~~~~~~~~ 110 (405)
.|+||++||.+ ++...|..++..|.+ +||.|+++|+||+|.+. .+.. ..+.
T Consensus 50 ~p~vv~lHGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~~~~~~~~~~~--~~d~ 105 (283)
T 3bjr_A 50 LPAIIIVPGGSYTHIPVAQAESLAMAFAG----------------------HGYQAFYLEYTLLTDQQPLGLAP--VLDL 105 (283)
T ss_dssp EEEEEEECCSTTTCCCHHHHHHHHHHHHT----------------------TTCEEEEEECCCTTTCSSCBTHH--HHHH
T ss_pred CcEEEEECCCccccCCccccHHHHHHHHh----------------------CCcEEEEEeccCCCccccCchhH--HHHH
Confidence 46899999954 444568889999987 49999999999999873 2110 1112
Q ss_pred HHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcc-------------cceEEEeccCCCCCCCCccchhHH
Q 015550 111 KIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPER-------------VLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 111 ~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~-------------v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
...++.+.+..+.+++ ++++++||||||.+|+.+|.++|++ ++++|++++.......++...
T Consensus 106 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~--- 182 (283)
T 3bjr_A 106 GRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKDD--- 182 (283)
T ss_dssp HHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC-------
T ss_pred HHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcccccccccccc---
Confidence 2222333333333344 4899999999999999999999987 999999987632110000000
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
.....++. . . ...+...
T Consensus 183 ---------------------------~~~~~~~~--------------------------~---~-------~~~~~~~ 199 (283)
T 3bjr_A 183 ---------------------------ATLATWTP--------------------------T---P-------NELAADQ 199 (283)
T ss_dssp -------------------------------CCCC--------------------------C---G-------GGGCGGG
T ss_pred ---------------------------chHHHHHH--------------------------H---h-------HhcCHHH
Confidence 00000000 0 0 0011122
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-CccccccCH-------------HHHHHHHHHHH
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERT-------------EEVNQALIDLI 318 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~e~p-------------~~v~~~i~~fl 318 (405)
.+..+.+|+|+++|++|.++|++.++.+++.+. .+++++++++ ||.+..+.+ +++.+.+.+||
T Consensus 200 ~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 279 (283)
T 3bjr_A 200 HVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWL 279 (283)
T ss_dssp SCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHH
T ss_pred hccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHH
Confidence 345678999999999999999999999988772 3469999998 997776654 68889999999
Q ss_pred Hhh
Q 015550 319 KAS 321 (405)
Q Consensus 319 ~~~ 321 (405)
++.
T Consensus 280 ~~~ 282 (283)
T 3bjr_A 280 ADN 282 (283)
T ss_dssp HHT
T ss_pred hhc
Confidence 763
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-20 Score=173.98 Aligned_cols=224 Identities=13% Similarity=0.040 Sum_probs=142.1
Q ss_pred ccCCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 21 NDNGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 21 ~~~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..+|.+|.+..+.+ ..|+||++||++++...|... ..|.. +||.|+++|+||
T Consensus 75 ~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~~~-~~l~~----------------------~G~~v~~~d~rG 131 (337)
T 1vlq_A 75 GYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDW-LFWPS----------------------MGYICFVMDTRG 131 (337)
T ss_dssp CGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGG-CHHHH----------------------TTCEEEEECCTT
T ss_pred cCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCchhh-cchhh----------------------CCCEEEEecCCC
Confidence 35777777665532 236799999999887665433 34443 399999999999
Q ss_pred CCCCCCCC--C---------------------CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHH
Q 015550 96 MGRSSVPV--K---------------------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAA 146 (405)
Q Consensus 96 ~G~S~~~~--~---------------------~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~ 146 (405)
+|.|.... . ...+.+....+|+.++++.+ +.++++++|||+||.+++.+|.
T Consensus 132 ~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~ 211 (337)
T 1vlq_A 132 QGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSA 211 (337)
T ss_dssp CCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHh
Confidence 99764321 0 01234557888888888877 2358999999999999999999
Q ss_pred hCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhh
Q 015550 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGI 226 (405)
Q Consensus 147 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (405)
.+| +++++|++++.... ... ..... ...+... ...++.. ...... .+...
T Consensus 212 ~~p-~v~~~vl~~p~~~~--------~~~---~~~~~-~~~~~~~---------~~~~~~~---~~~~~~----~~~~~- 261 (337)
T 1vlq_A 212 LSK-KAKALLCDVPFLCH--------FRR---AVQLV-DTHPYAE---------ITNFLKT---HRDKEE----IVFRT- 261 (337)
T ss_dssp HCS-SCCEEEEESCCSCC--------HHH---HHHHC-CCTTHHH---------HHHHHHH---CTTCHH----HHHHH-
T ss_pred cCC-CccEEEECCCcccC--------HHH---HHhcC-CCcchHH---------HHHHHHh---CchhHH----HHHHh-
Confidence 998 69999998875311 000 00000 0000000 0000000 000000 00000
Q ss_pred hhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc
Q 015550 227 SATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (405)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e 305 (405)
....+....+..+++|+|+++|++|.++|++....+++.+..+++++++++ ||....
T Consensus 262 ---------------------~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~- 319 (337)
T 1vlq_A 262 ---------------------LSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGG- 319 (337)
T ss_dssp ---------------------HHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTH-
T ss_pred ---------------------hhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcc-
Confidence 001122334567789999999999999999999999998855689999998 998643
Q ss_pred CHHHHHHHHHHHHHhh
Q 015550 306 RTEEVNQALIDLIKAS 321 (405)
Q Consensus 306 ~p~~v~~~i~~fl~~~ 321 (405)
++..+.+.+||.+.
T Consensus 320 --~~~~~~~~~fl~~~ 333 (337)
T 1vlq_A 320 --SFQAVEQVKFLKKL 333 (337)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --hhhHHHHHHHHHHH
Confidence 34556666676654
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=167.12 Aligned_cols=187 Identities=16% Similarity=0.116 Sum_probs=135.0
Q ss_pred ccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCC-----------
Q 015550 32 YGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS----------- 100 (405)
Q Consensus 32 ~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~----------- 100 (405)
.++..|+|||+||++++...|..++..|... .+...++.|+++|.|+++.+.
T Consensus 19 ~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~-----------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~ 81 (239)
T 3u0v_A 19 AGRHSASLIFLHGSGDSGQGLRMWIKQVLNQ-----------------DLTFQHIKIIYPTAPPRSYTPMKGGISNVWFD 81 (239)
T ss_dssp SSCCCEEEEEECCTTCCHHHHHHHHHHHHTS-----------------CCCCSSEEEEEECCCEEECGGGTTCEEECSSC
T ss_pred CCCCCcEEEEEecCCCchhhHHHHHHHHhhc-----------------ccCCCceEEEeCCCCccccccCCCCcccccee
Confidence 3445678999999999999999999888762 112248999998876532110
Q ss_pred -----CCCCCCCCCHHHHHHHHHHHHHH-----hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 101 -----VPVKKTEYTTKIMAKDVIALMDH-----LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 101 -----~~~~~~~~~~~~~~~dl~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
........++++.++++.+++++ ++.++++|+||||||.+|+.+|.++|++++++|++++.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----- 156 (239)
T 3u0v_A 82 RFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKA----- 156 (239)
T ss_dssp CSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTT-----
T ss_pred ccCCCcccccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCch-----
Confidence 00111234677888899988887 356799999999999999999999999999999999763100
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
... ....
T Consensus 157 --~~~-------------------------------------------~~~~---------------------------- 163 (239)
T 3u0v_A 157 --SAV-------------------------------------------YQAL---------------------------- 163 (239)
T ss_dssp --CHH-------------------------------------------HHHH----------------------------
T ss_pred --hHH-------------------------------------------HHHH----------------------------
Confidence 000 0000
Q ss_pred hhhhhhhhhcCCc-EEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 251 QKDIQTIRSAGFL-VSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 251 ~~~~~~l~~i~~P-vlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
.....++| +++++|++|.++|.+.++.+.+.+ ..+++++++++ ||... ++..+.+.+||++..
T Consensus 164 -----~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 164 -----QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS----KTELDILKLWILTKL 231 (239)
T ss_dssp -----HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC----HHHHHHHHHHHHHHC
T ss_pred -----HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC----HHHHHHHHHHHHHhC
Confidence 01223467 999999999999998888888877 33789999998 99987 344566667776654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.6e-21 Score=190.76 Aligned_cols=222 Identities=14% Similarity=0.146 Sum_probs=151.3
Q ss_pred ccCCEEEEEEEccC-----CCCeEEEEecCCCC--CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 21 NDNGIKIFYRTYGR-----GPTKVILITGLAGT--HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 21 ~~~g~~i~y~~~G~-----~~p~vvllHG~~~~--~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
..+|.++++..+.+ ..|+||++||++.+ ...|..++..|++ +||.|+++|+
T Consensus 340 ~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~ 397 (582)
T 3o4h_A 340 SFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAA----------------------AGFHVVMPNY 397 (582)
T ss_dssp CTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHH----------------------TTCEEEEECC
T ss_pred CCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHh----------------------CCCEEEEecc
Confidence 34787888776643 34689999998776 6788999999987 4999999999
Q ss_pred CC---CCCCCCCC---CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 94 RG---MGRSSVPV---KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 94 ~G---~G~S~~~~---~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
|| +|.+.... .......+++.+.+..+++....++++++||||||.+++.+|.++|++++++|++++..
T Consensus 398 rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~----- 472 (582)
T 3o4h_A 398 RGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVV----- 472 (582)
T ss_dssp TTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCC-----
T ss_pred CCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCcc-----
Confidence 99 66653211 11122344455555555554344599999999999999999999999999999999752
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
.... +........ ..+....+. ... +.+.
T Consensus 473 ----~~~~------~~~~~~~~~-----------~~~~~~~~~---~~~---~~~~------------------------ 501 (582)
T 3o4h_A 473 ----DWEE------MYELSDAAF-----------RNFIEQLTG---GSR---EIMR------------------------ 501 (582)
T ss_dssp ----CHHH------HHHTCCHHH-----------HHHHHHHTT---TCH---HHHH------------------------
T ss_pred ----CHHH------Hhhcccchh-----------HHHHHHHcC---cCH---HHHH------------------------
Confidence 1100 000000000 001111111 000 0000
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-Ccccc-ccCHHHHHHHHHHHHHhhc
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVS-HERTEEVNQALIDLIKASE 322 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~-~e~p~~v~~~i~~fl~~~~ 322 (405)
.......+.++++|+|+++|++|.++|++.++++++.+. .+++++++++ ||.+. .++++++.+.+.+||++..
T Consensus 502 --~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l 579 (582)
T 3o4h_A 502 --SRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQR 579 (582)
T ss_dssp --HTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred --hcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHc
Confidence 011223456778999999999999999999999998872 3489999998 99987 5688899999999998864
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=169.98 Aligned_cols=184 Identities=17% Similarity=0.126 Sum_probs=134.8
Q ss_pred CCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC--
Q 015550 23 NGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG-- 97 (405)
Q Consensus 23 ~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G-- 97 (405)
++..++|....+ .+|+||++||++++...|..+++.|.+ +|.|+++|.+++.
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~-----------------------~~~vv~~d~~~~~~~ 70 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAP-----------------------TATLVAARGRIPQED 70 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-----------------------TSEEEEECCSEEETT
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCHHHHHHHHHhcCC-----------------------CceEEEeCCCCCcCC
Confidence 455666666554 357899999999999999999999987 9999999988742
Q ss_pred -CCCCCC--C--CCCCCHHHHHHHHHHHHHHh----C--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 98 -RSSVPV--K--KTEYTTKIMAKDVIALMDHL----G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 98 -~S~~~~--~--~~~~~~~~~~~dl~~~l~~l----~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
.+.... . ....+..+.++++.++++.+ + .++++++||||||.+|+.+|.++|++++++|++++.....
T Consensus 71 g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~- 149 (223)
T 3b5e_A 71 GFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD- 149 (223)
T ss_dssp EEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-
T ss_pred ccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc-
Confidence 111000 0 01223455667777777654 3 3789999999999999999999999999999999763110
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
..
T Consensus 150 --------------------------------------------~~---------------------------------- 151 (223)
T 3b5e_A 150 --------------------------------------------HV---------------------------------- 151 (223)
T ss_dssp --------------------------------------------SC----------------------------------
T ss_pred --------------------------------------------cc----------------------------------
Confidence 00
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.....+++|+++++|++|.++|.+.++ +.+.+. .+++++++++||.+..+. .+.+.+||++.
T Consensus 152 --------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~~gH~~~~~~----~~~i~~~l~~~ 216 (223)
T 3b5e_A 152 --------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIPSGHDIGDPD----AAIVRQWLAGP 216 (223)
T ss_dssp --------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEESCCSCCCHHH----HHHHHHHHHCC
T ss_pred --------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEecCCCCcCHHH----HHHHHHHHHhh
Confidence 001224689999999999999999888 887772 268899999999886543 34677888653
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.8e-21 Score=177.79 Aligned_cols=225 Identities=12% Similarity=0.072 Sum_probs=144.5
Q ss_pred ccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 32 YGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 32 ~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
.|++ |+|+|+||++++...|.++++.|.. +|+|+++|+||+|.+... ..+++
T Consensus 98 ~g~~-~~l~~lhg~~~~~~~~~~l~~~L~~-----------------------~~~v~~~d~~g~~~~~~~----~~~~~ 149 (329)
T 3tej_A 98 EGNG-PTLFCFHPASGFAWQFSVLSRYLDP-----------------------QWSIIGIQSPRPNGPMQT----AANLD 149 (329)
T ss_dssp CCSS-CEEEEECCTTSCCGGGGGGGGTSCT-----------------------TCEEEEECCCTTTSHHHH----CSSHH
T ss_pred CCCC-CcEEEEeCCcccchHHHHHHHhcCC-----------------------CCeEEEeeCCCCCCCCCC----CCCHH
Confidence 3544 5699999999999999999999976 999999999999987532 34899
Q ss_pred HHHHHHHHHHHHh-CCccEEEEEEChhHHHHHHHHHh---CCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccC
Q 015550 112 IMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT 187 (405)
Q Consensus 112 ~~~~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (405)
++++++.+.+..+ +.++++|+||||||.+|+.+|.+ +|++|.++|++++.......... .. .....
T Consensus 150 ~~a~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~-------~~---~~~~~ 219 (329)
T 3tej_A 150 EVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQE-------KE---ANGLD 219 (329)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC---------------CCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCcccccc-------cc---ccccC
Confidence 9999988888776 55799999999999999999999 99999999999987421100000 00 00000
Q ss_pred hhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEE
Q 015550 188 PEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (405)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi 267 (405)
........ .....+........ .......+...+ ......-.......+++|++++
T Consensus 220 ~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~pv~l~ 275 (329)
T 3tej_A 220 PEVLAEIN---REREAFLAAQQGST--STELFTTIEGNY-------------------ADAVRLLTTAHSVPFDGKATLF 275 (329)
T ss_dssp CTHHHHHH---HHHHHHHHTTCCCS--CCHHHHHHHHHH-------------------HHHHHHHTTCCCCCEEEEEEEE
T ss_pred hhhHHHHH---HHHHHHHHhccccc--cHHHHHHHHHHH-------------------HHHHHHHhcCCCCCcCCCeEEE
Confidence 00000000 00000000000000 000001110000 0000000000124567999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCH--HHHHHHHHHHHH
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT--EEVNQALIDLIK 319 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p--~~v~~~i~~fl~ 319 (405)
.|+.|...+......+.+.. ++.+++.++|||+.+++.+ +++++.|.+||.
T Consensus 276 ~~~~d~~~~~~~~~~w~~~~-~~~~~~~v~g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 276 VAERTLQEGMSPERAWSPWI-AELDIYRQDCAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp EEGGGCCTTCCHHHHHTTTE-EEEEEEEESSCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred EeccCCCCCCCchhhHHHhc-CCcEEEEecCChHHhCCChHHHHHHHHHHHHhc
Confidence 99999887766666666655 7889999999999888876 789999999874
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-20 Score=190.67 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=148.2
Q ss_pred ccCC-EEEEEEEccCC-------CCeEEEEecCCCCC---Cchhh----hHhhhcCCCCCCCCchhhhccccCCCCCCCC
Q 015550 21 NDNG-IKIFYRTYGRG-------PTKVILITGLAGTH---DAWGP----QLKGLAGTDKPNDDDETILQDSVESGDGGAG 85 (405)
Q Consensus 21 ~~~g-~~i~y~~~G~~-------~p~vvllHG~~~~~---~~~~~----~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g 85 (405)
..+| .++++..+.+. .|+||++||++.+. ..|.. ++..|++ +|
T Consensus 462 ~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~----------------------~G 519 (706)
T 2z3z_A 462 AADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQ----------------------KG 519 (706)
T ss_dssp CTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHH----------------------TT
T ss_pred cCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHh----------------------CC
Confidence 4477 78888877541 26799999987765 45665 5777766 49
Q ss_pred eEEEEecCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEE
Q 015550 86 IEVCAFDNRGMGRSSVPVKK---TEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLA 156 (405)
Q Consensus 86 ~~Vi~~D~~G~G~S~~~~~~---~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 156 (405)
|.|+++|+||+|.+..+... ..+. ....+|+.++++.+ +.++++++||||||++|+.+|.++|++++++|
T Consensus 520 ~~v~~~d~rG~g~s~~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 598 (706)
T 2z3z_A 520 YAVFTVDSRGSANRGAAFEQVIHRRLG-QTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGV 598 (706)
T ss_dssp CEEEEECCTTCSSSCHHHHHTTTTCTT-HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEE
T ss_pred cEEEEEecCCCcccchhHHHHHhhccC-CccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEE
Confidence 99999999999998543110 1111 23346666666555 24689999999999999999999999999999
Q ss_pred EeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCccc
Q 015550 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (405)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (405)
++++.... .. +...+...+..........+..
T Consensus 599 ~~~~~~~~---------~~------------------------~~~~~~~~~~~~~~~~~~~~~~--------------- 630 (706)
T 2z3z_A 599 AGGPVIDW---------NR------------------------YAIMYGERYFDAPQENPEGYDA--------------- 630 (706)
T ss_dssp EESCCCCG---------GG------------------------SBHHHHHHHHCCTTTCHHHHHH---------------
T ss_pred EcCCccch---------HH------------------------HHhhhhhhhcCCcccChhhhhh---------------
Confidence 99876310 00 0000111111110000000000
Q ss_pred chhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHH
Q 015550 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQ 312 (405)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~ 312 (405)
.+....+.++++|+|+++|++|.++|++.++++++.+ ..+.+++++++ ||.+..++++++.+
T Consensus 631 --------------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 696 (706)
T 2z3z_A 631 --------------ANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYE 696 (706)
T ss_dssp --------------HCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHH
T ss_pred --------------CCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHH
Confidence 1122345678899999999999999999999998877 23469999998 99998888999999
Q ss_pred HHHHHHHhh
Q 015550 313 ALIDLIKAS 321 (405)
Q Consensus 313 ~i~~fl~~~ 321 (405)
.|.+||++.
T Consensus 697 ~i~~fl~~~ 705 (706)
T 2z3z_A 697 TITRYFTDH 705 (706)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999864
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=185.71 Aligned_cols=220 Identities=17% Similarity=0.180 Sum_probs=136.4
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.|+||++||++++. |..++..|++ +||.|+++|+||+|.+..... .+..+++.+
T Consensus 158 ~P~Vv~~hG~~~~~--~~~~a~~La~----------------------~Gy~V~a~D~rG~g~~~~~~~--~~~~~d~~~ 211 (422)
T 3k2i_A 158 FPGIIDIFGIGGGL--LEYRASLLAG----------------------HGFATLALAYYNFEDLPNNMD--NISLEYFEE 211 (422)
T ss_dssp BCEEEEECCTTCSC--CCHHHHHHHT----------------------TTCEEEEEECSSSTTSCSSCS--CEETHHHHH
T ss_pred cCEEEEEcCCCcch--hHHHHHHHHh----------------------CCCEEEEEccCCCCCCCCCcc--cCCHHHHHH
Confidence 36899999998764 4445777877 499999999999998865543 455666666
Q ss_pred HHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc
Q 015550 116 DVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (405)
Q Consensus 116 dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
.+..+.++.+ .++++|+||||||.+|+.+|..+|+ |+++|++++............. ...
T Consensus 212 ~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~-----------------~~~ 273 (422)
T 3k2i_A 212 AVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKH-----------------SSI 273 (422)
T ss_dssp HHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETT-----------------EEE
T ss_pred HHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcC-----------------CcC
Confidence 5555555443 4799999999999999999999997 9999999977422110000000 000
Q ss_pred cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCc
Q 015550 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
... ..... .. .....+.. .+...+.... ..........+.++++|+|+|+|++|.
T Consensus 274 ~~~--~~~~~---~~----------------~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~i~~P~Lii~G~~D~ 328 (422)
T 3k2i_A 274 PPL--GYDLR---RI----------------KVAFSGLV---DIVDIRNALV-GGYKNPSMIPIEKAQGPILLIVGQDDH 328 (422)
T ss_dssp CCC--CBCGG---GC----------------EECTTSCE---ECTTCBCCCT-TGGGSTTBCCGGGCCSCEEEEEETTCS
T ss_pred CCc--ccchh---hc----------------ccCcchhH---HHHHHHhhhh-hcccccccccHHHCCCCEEEEEeCCCC
Confidence 000 00000 00 00000000 0000000000 000011122356788999999999999
Q ss_pred cCCHHHH-HHHHHHh---C-CCeEEEEcCC-Cccc----------------------------cccCHHHHHHHHHHHHH
Q 015550 274 IAQICYA-RRLAEKL---Y-PVARMIDLPG-GHLV----------------------------SHERTEEVNQALIDLIK 319 (405)
Q Consensus 274 ~~~~~~~-~~l~~~l---~-~~~~l~~~~g-gH~~----------------------------~~e~p~~v~~~i~~fl~ 319 (405)
++|.+.. +.+.+.+ . ++++++++++ ||.+ +.+.++++.+.+.+||+
T Consensus 329 ~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~ 408 (422)
T 3k2i_A 329 NWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFC 408 (422)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHH
Confidence 9998754 5666655 2 2389999998 9987 23557889999999999
Q ss_pred hhcCC
Q 015550 320 ASEKK 324 (405)
Q Consensus 320 ~~~~~ 324 (405)
++...
T Consensus 409 ~~L~~ 413 (422)
T 3k2i_A 409 KHLGG 413 (422)
T ss_dssp HHC--
T ss_pred HhcCC
Confidence 87653
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-19 Score=163.86 Aligned_cols=195 Identities=21% Similarity=0.158 Sum_probs=125.7
Q ss_pred cccCCEEEEEEEcc---C-CCCeEEEEecCCCCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 20 LNDNGIKIFYRTYG---R-GPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 20 ~~~~g~~i~y~~~G---~-~~p~vvllHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
++.||.+|....+- . ..|.||++||++++.. .+..+++.|+. +||.|+++|+
T Consensus 36 ~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~----------------------~Gy~Vl~~D~ 93 (259)
T 4ao6_A 36 LEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVG----------------------RGISAMAIDG 93 (259)
T ss_dssp EEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHH----------------------TTEEEEEECC
T ss_pred EeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHH----------------------CCCeEEeecc
Confidence 56789998865542 2 3457888999998753 46677888887 5999999999
Q ss_pred CCCCCCCCCCCCCC-----------------CCHHHHHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 94 RGMGRSSVPVKKTE-----------------YTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 94 ~G~G~S~~~~~~~~-----------------~~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
||||.|........ ........|..+.++. .+.+++.++|+||||.+++.+|...| ++
T Consensus 94 rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~p-ri 172 (259)
T 4ao6_A 94 PGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDK-RI 172 (259)
T ss_dssp CC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCT-TE
T ss_pred CCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCC-ce
Confidence 99998864332100 0112233344444443 36679999999999999999999987 57
Q ss_pred ceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhcccc
Q 015550 153 LSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ 232 (405)
Q Consensus 153 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (405)
++.|+..+..... .
T Consensus 173 ~Aav~~~~~~~~~------~------------------------------------------------------------ 186 (259)
T 4ao6_A 173 KVALLGLMGVEGV------N------------------------------------------------------------ 186 (259)
T ss_dssp EEEEEESCCTTST------T------------------------------------------------------------
T ss_pred EEEEEeccccccc------c------------------------------------------------------------
Confidence 7766554321000 0
Q ss_pred CcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCCCccccccCHHHHH
Q 015550 233 SNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPGGHLVSHERTEEVN 311 (405)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~ggH~~~~e~p~~v~ 311 (405)
..+..+...++++|+|++||++|.++|++.++.+.+.+. ++.++++++|+|... ...++.
T Consensus 187 -----------------~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G~H~~~--p~~e~~ 247 (259)
T 4ao6_A 187 -----------------GEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPGKHSAV--PTWEMF 247 (259)
T ss_dssp -----------------HHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESSCTTCC--CHHHHT
T ss_pred -----------------ccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCCCCCCc--CHHHHH
Confidence 001122346778999999999999999999999999883 567889999988543 235677
Q ss_pred HHHHHHHHhhc
Q 015550 312 QALIDLIKASE 322 (405)
Q Consensus 312 ~~i~~fl~~~~ 322 (405)
+.+.+||++..
T Consensus 248 ~~~~~fl~~hL 258 (259)
T 4ao6_A 248 AGTVDYLDQRL 258 (259)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 88888998753
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=173.46 Aligned_cols=233 Identities=16% Similarity=0.088 Sum_probs=142.4
Q ss_pred cCCEEEEEEEccC----CCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 22 DNGIKIFYRTYGR----GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 22 ~~g~~i~y~~~G~----~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.++..+.+..+.+ +.|+||++||++ ++...|..++..|... .||.|+++|+|
T Consensus 55 ~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~d~r 113 (311)
T 2c7b_A 55 VSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRL---------------------SDSVVVSVDYR 113 (311)
T ss_dssp ETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHH---------------------HTCEEEEECCC
T ss_pred CCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChhhhHHHHHHHHHh---------------------cCCEEEEecCC
Confidence 3333666554432 236899999998 8888999999998761 28999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCc----ccceEEEeccCCCCCCCC
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTGGGFQCC 168 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~ 168 (405)
|+|.+..+.. ..+....++++.+.++.++. ++++|+||||||.+|+.+|..+|+ +++++|++++.......
T Consensus 114 g~g~~~~~~~--~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~- 190 (311)
T 2c7b_A 114 LAPEYKFPTA--VEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGV- 190 (311)
T ss_dssp CTTTSCTTHH--HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSC-
T ss_pred CCCCCCCCcc--HHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccc-
Confidence 9999865432 23445555566666666676 689999999999999999998876 49999999986421100
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
... ..... .... . ......... .....+...... ... +
T Consensus 191 --~~~-~~~~~-~~~~----------~--~~~~~~~~~----------~~~~~~~~~~~~---~~~----------~--- 228 (311)
T 2c7b_A 191 --PTA-SLVEF-GVAE----------T--TSLPIELMV----------WFGRQYLKRPEE---AYD----------F--- 228 (311)
T ss_dssp --CCH-HHHHH-HHCT----------T--CSSCHHHHH----------HHHHHHCSSTTG---GGS----------T---
T ss_pred --ccc-CCccH-HHhc----------c--CCCCHHHHH----------HHHHHhCCCCcc---ccC----------c---
Confidence 000 00000 0000 0 001111000 001111100000 000 0
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHH--HHHHHHhCCCeEEEEcCC-Ccccc-----ccCHHHHHHHHHHHHHh
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA--RRLAEKLYPVARMIDLPG-GHLVS-----HERTEEVNQALIDLIKA 320 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~--~~l~~~l~~~~~l~~~~g-gH~~~-----~e~p~~v~~~i~~fl~~ 320 (405)
........+..+. |+|+++|++|.+++.... +.+.+ ...++++++++| +|.+. .+.++++.+.+.+||++
T Consensus 229 ~~~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~-~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (311)
T 2c7b_A 229 KASPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKA-SGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRS 306 (311)
T ss_dssp TTCGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHH-TTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHH-CCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHH
Confidence 0000111233343 999999999999874322 33333 246789999999 99776 35678999999999987
Q ss_pred hc
Q 015550 321 SE 322 (405)
Q Consensus 321 ~~ 322 (405)
..
T Consensus 307 ~l 308 (311)
T 2c7b_A 307 GL 308 (311)
T ss_dssp HT
T ss_pred Hh
Confidence 64
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=166.82 Aligned_cols=192 Identities=13% Similarity=0.100 Sum_probs=136.9
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCC---eEEEEecCCCCCCCC--C--------CC
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG---IEVCAFDNRGMGRSS--V--------PV 103 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g---~~Vi~~D~~G~G~S~--~--------~~ 103 (405)
+||||+||++++...|..+++.|.+ ++ ++|+.+|.+++|.+. . |.
T Consensus 5 ~pvv~iHG~~~~~~~~~~~~~~L~~----------------------~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~ 62 (250)
T 3lp5_A 5 APVIMVPGSSASQNRFDSLITELGK----------------------ETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPF 62 (250)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHHHH----------------------HSSSCCCEEEEEECTTSCEEEEECCCTTCSSCE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHh----------------------cCCCCceEEEEEEecCCeEEEeeecCCCCcCCe
Confidence 4699999999999999999999987 24 789988888777521 1 10
Q ss_pred -------CCCCC-CHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhC-----CcccceEEEeccCCCCCC
Q 015550 104 -------KKTEY-TTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 104 -------~~~~~-~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~ 166 (405)
....| +++++++++.++++.+ +.++++++||||||.++..++..+ |++|+++|+++++..+..
T Consensus 63 i~v~f~~n~~~~~~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~ 142 (250)
T 3lp5_A 63 IVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMES 142 (250)
T ss_dssp EEEEESCCCCSHHHHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTC
T ss_pred EEEEeccCCCcccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccc
Confidence 00122 6788899999999888 888999999999999999999987 678999999998753322
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
..+ .... ..++.+.+
T Consensus 143 ~~~----------------------------~~~~---------------~~~~~l~~---------------------- 157 (250)
T 3lp5_A 143 TST----------------------------TAKT---------------SMFKELYR---------------------- 157 (250)
T ss_dssp CCS----------------------------SCCC---------------HHHHHHHH----------------------
T ss_pred ccc----------------------------cccC---------------HHHHHHHh----------------------
Confidence 100 0000 00111110
Q ss_pred cccChhhhhhhhhcCCcEEEEeec----CCccCCHHHHHHHHHHhCCC-e--EEEEcC--C-CccccccCHHHHHHHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGR----HDVIAQICYARRLAEKLYPV-A--RMIDLP--G-GHLVSHERTEEVNQALID 316 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~----~D~~~~~~~~~~l~~~l~~~-~--~l~~~~--g-gH~~~~e~p~~v~~~i~~ 316 (405)
....++. ++|+++|+|+ .|.++|.+.++.+...+.+. . +.+.+. + +|..++++| +|++.|.+
T Consensus 158 ------~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~ 229 (250)
T 3lp5_A 158 ------YRTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQ 229 (250)
T ss_dssp ------TGGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHH
T ss_pred ------ccccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHH
Confidence 0112222 6899999999 99999999888877766332 2 233343 3 699999988 89999999
Q ss_pred HHHhhcC
Q 015550 317 LIKASEK 323 (405)
Q Consensus 317 fl~~~~~ 323 (405)
||.....
T Consensus 230 FL~~~~~ 236 (250)
T 3lp5_A 230 YLLAETM 236 (250)
T ss_dssp HTSCCCC
T ss_pred HHhcccc
Confidence 9976543
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=192.06 Aligned_cols=218 Identities=17% Similarity=0.161 Sum_probs=149.3
Q ss_pred ccCC-EEEEEEEccCC-------CCeEEEEecCCCCC---Cchh-----hhHhhhcCCCCCCCCchhhhccccCCCCCCC
Q 015550 21 NDNG-IKIFYRTYGRG-------PTKVILITGLAGTH---DAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (405)
Q Consensus 21 ~~~g-~~i~y~~~G~~-------~p~vvllHG~~~~~---~~~~-----~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (405)
..+| .+++|..+.+. .|+||++||++++. ..|. .++..|++ +
T Consensus 494 ~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~ 551 (741)
T 2ecf_A 494 AADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQ----------------------Q 551 (741)
T ss_dssp CTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHH----------------------T
T ss_pred cCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHh----------------------C
Confidence 4478 89999887542 25799999998874 4565 57788876 4
Q ss_pred CeEEEEecCCCCCCCCCCCCCC-CCCH-HHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEE
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKT-EYTT-KIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLA 156 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~-~~~~-~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 156 (405)
||.|+++|+||+|.|..+.... ...+ ....+|+.++++.+ +.++++++||||||.+++.+|.++|++++++|
T Consensus 552 G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 631 (741)
T 2ecf_A 552 GYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGV 631 (741)
T ss_dssp TCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEE
T ss_pred CCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEE
Confidence 9999999999999975321100 0010 11245555555544 34689999999999999999999999999999
Q ss_pred EeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCccc
Q 015550 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (405)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (405)
++++..... .. ...+...+......... .+.
T Consensus 632 ~~~~~~~~~----~~-----------------------------~~~~~~~~~~~~~~~~~---~~~------------- 662 (741)
T 2ecf_A 632 AGAPVTDWG----LY-----------------------------DSHYTERYMDLPARNDA---GYR------------- 662 (741)
T ss_dssp EESCCCCGG----GS-----------------------------BHHHHHHHHCCTGGGHH---HHH-------------
T ss_pred EcCCCcchh----hh-----------------------------ccccchhhcCCcccChh---hhh-------------
Confidence 999763100 00 00011111111100000 000
Q ss_pred chhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCC-CccccccCHHHHHH
Q 015550 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQ 312 (405)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~g-gH~~~~e~p~~v~~ 312 (405)
..+....+.++++|+|+++|++|.+++++.++++++.+. ...+++++++ ||.++.+.++++.+
T Consensus 663 -------------~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 729 (741)
T 2ecf_A 663 -------------EARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYR 729 (741)
T ss_dssp -------------HHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHH
T ss_pred -------------hcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHH
Confidence 001123456788999999999999999999999998772 3458999998 99999888899999
Q ss_pred HHHHHHHhhc
Q 015550 313 ALIDLIKASE 322 (405)
Q Consensus 313 ~i~~fl~~~~ 322 (405)
.|.+||++..
T Consensus 730 ~i~~fl~~~l 739 (741)
T 2ecf_A 730 VAEAFLGRCL 739 (741)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-19 Score=184.60 Aligned_cols=226 Identities=17% Similarity=0.164 Sum_probs=155.0
Q ss_pred cCCEEEEEEEccC-----------CCCeEEEEecCCCCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 22 DNGIKIFYRTYGR-----------GPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 22 ~~g~~i~y~~~G~-----------~~p~vvllHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
.+|.++++..+.+ ..|+||++||++++.. .|..++..|++ +||.|
T Consensus 399 ~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~----------------------~G~~v 456 (662)
T 3azo_A 399 PDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTS----------------------RGIGV 456 (662)
T ss_dssp TTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHT----------------------TTCEE
T ss_pred CCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHh----------------------CCCEE
Confidence 4788887766532 2468999999987765 78888888887 49999
Q ss_pred EEecCCC---CCCCCCCCC---CCCCCHHHHHHHHHHHHHH--hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 89 CAFDNRG---MGRSSVPVK---KTEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 89 i~~D~~G---~G~S~~~~~---~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
+++|+|| +|.+..... ....+++++.+.+..++++ ++.++++|+||||||.+++.++.. |++++++|++++
T Consensus 457 ~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~ 535 (662)
T 3azo_A 457 ADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYP 535 (662)
T ss_dssp EEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESC
T ss_pred EEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCC
Confidence 9999999 777642211 1134567777788788777 556799999999999999998886 999999999987
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
.. +... +..... ..+...+...++....... +.+..
T Consensus 536 ~~---------~~~~------~~~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~---------------- 571 (662)
T 3azo_A 536 VL---------DLLG------WADGGT----------HDFESRYLDFLIGSFEEFP---ERYRD---------------- 571 (662)
T ss_dssp CC---------CHHH------HHTTCS----------CGGGTTHHHHHTCCTTTCH---HHHHH----------------
T ss_pred cc---------CHHH------Hhcccc----------cchhhHhHHHHhCCCccch---hHHHh----------------
Confidence 62 1100 000000 0000111111111110000 00000
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC---CeEEEEcCC-Ccccc-ccCHHHHHHHHH
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPG-GHLVS-HERTEEVNQALI 315 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~---~~~l~~~~g-gH~~~-~e~p~~v~~~i~ 315 (405)
......+.++++|+|+++|++|.++|++.++++++.+.. .++++++++ ||.+. .++++++.+.+.
T Consensus 572 ----------~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 641 (662)
T 3azo_A 572 ----------RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAEL 641 (662)
T ss_dssp ----------TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHH
T ss_pred ----------hChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHH
Confidence 112234567889999999999999999999999998832 358999998 99774 457789999999
Q ss_pred HHHHhhcCC
Q 015550 316 DLIKASEKK 324 (405)
Q Consensus 316 ~fl~~~~~~ 324 (405)
+||.+....
T Consensus 642 ~fl~~~l~~ 650 (662)
T 3azo_A 642 SLYAQVFGV 650 (662)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhCC
Confidence 999987654
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.4e-20 Score=171.85 Aligned_cols=229 Identities=14% Similarity=0.109 Sum_probs=142.8
Q ss_pred cccCCEEEEEEEcc-CCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 20 LNDNGIKIFYRTYG-RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 20 ~~~~g~~i~y~~~G-~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
...+|..+++...+ .+.|+||++||.+ ++...|..++..|... .||.|+++|+||
T Consensus 79 ~~~~~~~~~~~~p~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~---------------------~g~~vi~~D~r~ 137 (326)
T 3d7r_A 79 LSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKITLS---------------------TLYEVVLPIYPK 137 (326)
T ss_dssp EEETTEEEEEEESTTCCSSEEEEECCSTTTSCCCHHHHHHHHHHHHH---------------------HCSEEEEECCCC
T ss_pred EEECCEEEEEEeeCCCCCeEEEEECCCcccCCCCHHHHHHHHHHHHH---------------------hCCEEEEEeCCC
Confidence 45678888755443 3457899999965 4566788888888741 289999999998
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCCCCCccc
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~ 171 (405)
.+... ....+++.++++..+++.++.++++|+||||||.+|+.+|.++|++ ++++|++++........+..
T Consensus 138 ~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~ 212 (326)
T 3d7r_A 138 TPEFH-----IDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDI 212 (326)
T ss_dssp TTTSC-----HHHHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTC
T ss_pred CCCCC-----chHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhH
Confidence 65432 1234667777777777888889999999999999999999998877 99999999864221111100
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
.. ... .. ........+. .....+..... ..... . .
T Consensus 213 ~~-~~~-------------~~----~~~~~~~~~~----------~~~~~~~~~~~----~~~~~----~---------~ 247 (326)
T 3d7r_A 213 SD-ALI-------------EQ----DAVLSQFGVN----------EIMKKWANGLP----LTDKR----I---------S 247 (326)
T ss_dssp CH-HHH-------------HH----CSSCCHHHHH----------HHHHHHHTTSC----TTSTT----T---------S
T ss_pred Hh-hhc-------------cc----CcccCHHHHH----------HHHHHhcCCCC----CCCCe----E---------C
Confidence 00 000 00 0000000000 01111110000 00000 0 0
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc---cCHHHHHHHHHHHHHhhc
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH---ERTEEVNQALIDLIKASE 322 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~---e~p~~v~~~i~~fl~~~~ 322 (405)
.....+.. -+|+|+++|++|..++ ....+++.+ .+++++++++| ||.++. ++++++.+.|.+||++..
T Consensus 248 ~~~~~~~~-~~P~lii~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 248 PINGTIEG-LPPVYMFGGGREMTHP--DMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp GGGSCCTT-CCCEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred cccCCccc-CCCEEEEEeCcccchH--HHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHh
Confidence 00011111 2599999999997544 334444333 46789999998 999888 889999999999997643
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=7e-20 Score=169.90 Aligned_cols=215 Identities=13% Similarity=0.107 Sum_probs=135.1
Q ss_pred CCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 35 GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 35 ~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
..|+||++||++ ++...|..++..|+.. .||.|+++|+||+|.+..+.. ..+..
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~g~~Vv~~dyrg~g~~~~p~~--~~d~~ 134 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSIESHDALCRRIARL---------------------SNSTVVSVDYRLAPEHKFPAA--VYDCY 134 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHH---------------------HTSEEEEEECCCTTTSCTTHH--HHHHH
T ss_pred CceEEEEECCcccccCChhHhHHHHHHHHHH---------------------hCCEEEEecCCCCCCCCCCCc--HHHHH
Confidence 346899999999 7888999999998731 399999999999999875442 33555
Q ss_pred HHHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCCCCCccchhHHHHHHHHHhhc
Q 015550 112 IMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (405)
Q Consensus 112 ~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (405)
+.++++.+.++.++.+ +++|+|||+||.+|+.+|.++|++ ++++|+++|........ ... ..+.
T Consensus 135 ~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~-----~~~---~~~~-- 204 (311)
T 1jji_A 135 DATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPT-----PSL---LEFG-- 204 (311)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCC-----HHH---HHTS--
T ss_pred HHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCC-----ccH---HHhc--
Confidence 6667777777777765 899999999999999999998876 99999999874221100 000 0000
Q ss_pred cChhhhhccCcccc-cCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcE
Q 015550 186 KTPEKRAAVDLDTH-YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (405)
Q Consensus 186 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (405)
. ... ....... .....|...... ..... . ......+..+ .|+
T Consensus 205 ---------~-~~~~~~~~~~~----------~~~~~~~~~~~~----~~~~~---~---------~p~~~~l~~~-~P~ 247 (311)
T 1jji_A 205 ---------E-GLWILDQKIMS----------WFSEQYFSREED----KFNPL---A---------SVIFADLENL-PPA 247 (311)
T ss_dssp ---------S-SCSSCCHHHHH----------HHHHHHCSSGGG----GGCTT---T---------SGGGSCCTTC-CCE
T ss_pred ---------C-CCccCCHHHHH----------HHHHHhCCCCcc----CCCcc---c---------CcccccccCC-Chh
Confidence 0 000 0111000 001111100000 00000 0 0000122222 499
Q ss_pred EEEeecCCccCCHH--HHHHHHHHhCCCeEEEEcCC-Ccccccc-----CHHHHHHHHHHHHHh
Q 015550 265 SVIHGRHDVIAQIC--YARRLAEKLYPVARMIDLPG-GHLVSHE-----RTEEVNQALIDLIKA 320 (405)
Q Consensus 265 lvi~G~~D~~~~~~--~~~~l~~~l~~~~~l~~~~g-gH~~~~e-----~p~~v~~~i~~fl~~ 320 (405)
++++|++|.+++.. .++++.+. ..++++++++| +|.+... ..+++.+.+.+||++
T Consensus 248 li~~G~~D~l~~~~~~~~~~l~~~-g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 248 LIITAEYDPLRDEGEVFGQMLRRA-GVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHT-TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred eEEEcCcCcchHHHHHHHHHHHHc-CCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99999999988532 23334332 46799999999 9977653 457888899999875
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-20 Score=181.71 Aligned_cols=220 Identities=13% Similarity=0.136 Sum_probs=135.1
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.|+||++||++++... ..+..|++ +||.|+++|+||+|.+..... ....+++.+
T Consensus 174 ~P~Vv~lhG~~~~~~~--~~a~~La~----------------------~Gy~Vla~D~rG~~~~~~~~~--~~~~~d~~~ 227 (446)
T 3hlk_A 174 FPGIVDMFGTGGGLLE--YRASLLAG----------------------KGFAVMALAYYNYEDLPKTME--TLHLEYFEE 227 (446)
T ss_dssp BCEEEEECCSSCSCCC--HHHHHHHT----------------------TTCEEEEECCSSSTTSCSCCS--EEEHHHHHH
T ss_pred CCEEEEECCCCcchhh--HHHHHHHh----------------------CCCEEEEeccCCCCCCCcchh--hCCHHHHHH
Confidence 3689999999876443 34777877 499999999999998865543 345666666
Q ss_pred HHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhc
Q 015550 116 DVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (405)
Q Consensus 116 dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
.+..+.++.++ ++++|+||||||.+|+.+|..+|+ |+++|++++............. . ..
T Consensus 228 a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~-----------~------~~ 289 (446)
T 3hlk_A 228 AMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKG-----------E------TL 289 (446)
T ss_dssp HHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETT-----------E------EE
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccC-----------c------cC
Confidence 66555555443 689999999999999999999997 9999999886422111000000 0 00
Q ss_pred cCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCc
Q 015550 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (405)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~ 273 (405)
... ........ . ...+. ..+...+.... ..........+.++++|+|+|+|++|.
T Consensus 290 ~~~--~~~~~~~~--~-----------------~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~i~~PvLii~G~~D~ 344 (446)
T 3hlk_A 290 PPV--GVNRNRIK--V-----------------TKDGY---ADIVDVLNSPL-EGPDQKSFIPVERAESTFLFLVGQDDH 344 (446)
T ss_dssp CCC--CBCGGGCE--E-----------------CSSSC---EECTTCBCCTT-SGGGGGGBCCGGGCCSEEEEEEETTCC
T ss_pred Ccc--ccchhccc--c-----------------ccchH---HHHHHHHhchh-hccccccccCHHHCCCCEEEEEeCCCC
Confidence 000 00000000 0 00000 00000000000 000011122356788999999999999
Q ss_pred cCCHHH-HHHHHHHh---C-CCeEEEEcCC-Ccccc----------------------------ccCHHHHHHHHHHHHH
Q 015550 274 IAQICY-ARRLAEKL---Y-PVARMIDLPG-GHLVS----------------------------HERTEEVNQALIDLIK 319 (405)
Q Consensus 274 ~~~~~~-~~~l~~~l---~-~~~~l~~~~g-gH~~~----------------------------~e~p~~v~~~i~~fl~ 319 (405)
++|.+. ++.+.+.+ . ++++++++++ ||.+. .+.++++.+.+.+||+
T Consensus 345 ~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~ 424 (446)
T 3hlk_A 345 NWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFH 424 (446)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHH
Confidence 999843 35666655 2 2389999998 99882 2236789999999999
Q ss_pred hhcCC
Q 015550 320 ASEKK 324 (405)
Q Consensus 320 ~~~~~ 324 (405)
+....
T Consensus 425 ~~L~~ 429 (446)
T 3hlk_A 425 KHLGG 429 (446)
T ss_dssp HHC--
T ss_pred HhhCC
Confidence 87643
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=169.97 Aligned_cols=217 Identities=18% Similarity=0.155 Sum_probs=127.6
Q ss_pred CCeEEEEecCCCC---CCc--hhhhHhhhc-CCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCC
Q 015550 36 PTKVILITGLAGT---HDA--WGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (405)
Q Consensus 36 ~p~vvllHG~~~~---~~~--~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~ 109 (405)
.|+||++||++.. ... |..++..|+ + .||.|+++|+||++.+..+
T Consensus 83 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~----------------------~g~~vv~~d~rg~~~~~~~------- 133 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFSAASTIFHDFCCEMAVH----------------------AGVVIASVDYRLAPEHRLP------- 133 (338)
T ss_dssp EEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH----------------------HTCEEEEEECCCTTTTCTT-------
T ss_pred ceEEEEEcCCcCcCCCCCchhHHHHHHHHHHH----------------------CCcEEEEecCCCCCCCCCc-------
Confidence 3679999997733 233 888888887 4 3999999999998765322
Q ss_pred HHHHHHHHHHHHHHh------------CCccEEEEEEChhHHHHHHHHHhCCc--------ccceEEEeccCCCCCCCCc
Q 015550 110 TKIMAKDVIALMDHL------------GWKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l------------~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~ 169 (405)
...+|+.++++.+ +.++++|+||||||.+|+.+|.++|+ +|+++|++++.........
T Consensus 134 --~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~ 211 (338)
T 2o7r_A 134 --AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTG 211 (338)
T ss_dssp --HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCH
T ss_pred --hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCCh
Confidence 2344444444433 33689999999999999999999988 8999999998643221110
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
. . ... ........... ..+.......+..........+.. ..
T Consensus 212 ~----~----~~~------------~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~----~~ 253 (338)
T 2o7r_A 212 S----E----LRL------------ANDSRLPTFVL--------------DLIWELSLPMGADRDHEYCNPTAE----SE 253 (338)
T ss_dssp H----H----HHT------------TTCSSSCHHHH--------------HHHHHHHSCTTCCTTSTTTCCC--------
T ss_pred h----h----hcc------------CCCcccCHHHH--------------HHHHHHhCCCCCCCCCcccCCCCC----Cc
Confidence 0 0 000 00000000000 011110000000000000000000 00
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHH--HHHHHHHHhCCCeEEEEcCC-CccccccCH---HHHHHHHHHHHHhhc
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQIC--YARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKASE 322 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~--~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p---~~v~~~i~~fl~~~~ 322 (405)
.....+.+..+.+|+|+++|++|.+++.. ..+.+.+. .+++++++++| ||.++.+++ +++.+.|.+||++..
T Consensus 254 ~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~-~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 254 PLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKK-GVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHT-TCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred ccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHC-CCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 00022445667789999999999998733 23333332 46789999998 999888776 789999999997653
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=157.98 Aligned_cols=176 Identities=15% Similarity=0.090 Sum_probs=123.2
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC----CCCCCCCH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP----VKKTEYTT 110 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~----~~~~~~~~ 110 (405)
.+++|||+||+|++...|..+++.|.. .++.|+++|.+|++.-+.. ........
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~l~~~l~~----------------------~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~ 78 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIISLQKVLKL----------------------DEMAIYAPQATNNSWYPYSFMAPVQQNQPAL 78 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHGGGGTSSC----------------------TTEEEEEECCGGGCSSSSCTTSCGGGGTTHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHhCC----------------------CCeEEEeecCCCCCccccccCCCcccchHHH
Confidence 356899999999999889888888875 4999999999987632211 11112234
Q ss_pred HHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhc
Q 015550 111 KIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (405)
Q Consensus 111 ~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (405)
++..+.+..+++. .+ .++++++|+|+||.+|+.++.++|+++.++|.+++.........
T Consensus 79 ~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~---------------- 142 (210)
T 4h0c_A 79 DSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI---------------- 142 (210)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG----------------
T ss_pred HHHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh----------------
Confidence 4444445444443 33 35899999999999999999999999999999986421000000
Q ss_pred cChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEE
Q 015550 186 KTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (405)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (405)
..... ...++|++
T Consensus 143 -----------------------------------------------------------------~~~~~--~~~~~Pvl 155 (210)
T 4h0c_A 143 -----------------------------------------------------------------GNYKG--DFKQTPVF 155 (210)
T ss_dssp -----------------------------------------------------------------GGCCB--CCTTCEEE
T ss_pred -----------------------------------------------------------------hhhhh--hccCCceE
Confidence 00000 11247999
Q ss_pred EEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 266 VIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 266 vi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
++||++|.++|.+.++++.+.+ ..++++++++| ||.+. ++++ +.|.+||.
T Consensus 156 ~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~---~~el-~~i~~wL~ 209 (210)
T 4h0c_A 156 ISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS---GDEI-QLVNNTIL 209 (210)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC---HHHH-HHHHHTTT
T ss_pred EEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC---HHHH-HHHHHHHc
Confidence 9999999999999988887766 35678999998 99774 3443 55677764
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=168.40 Aligned_cols=212 Identities=13% Similarity=0.136 Sum_probs=142.0
Q ss_pred eEEEEec--CCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC-CCCCCCCHHHHH
Q 015550 38 KVILITG--LAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP-VKKTEYTTKIMA 114 (405)
Q Consensus 38 ~vvllHG--~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~ 114 (405)
+|+|+|| ++++...|.+++..|.. ++.|+++|+||+|.+... ......++++++
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~-----------------------~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a 147 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQE-----------------------ERDFLAVPLPGYGTGTGTGTALLPADLDTAL 147 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTT-----------------------TCCEEEECCTTCCBC---CBCCEESSHHHHH
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCC-----------------------CCceEEecCCCCCCCcccccCCCCCCHHHHH
Confidence 7999998 67888899999999986 999999999999997210 011256899999
Q ss_pred HHHHHHHHHh-CCccEEEEEEChhHHHHHHHHHhC----CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChh
Q 015550 115 KDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (405)
Q Consensus 115 ~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (405)
+++.+.++.+ +..+++++||||||.+|+.+|.+. +++|+++|++++...... .... .++...
T Consensus 148 ~~~~~~i~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~-------~~~~---~~~~~l--- 214 (319)
T 2hfk_A 148 DAQARAILRAAGDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ-------EPIE---VWSRQL--- 214 (319)
T ss_dssp HHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSC-------HHHH---HTHHHH---
T ss_pred HHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCch-------hHHH---HHHHHh---
Confidence 9999999887 467899999999999999999987 456999999998642211 0000 000000
Q ss_pred hhhccCcccccCHhHHHhhhCCCchhH-HHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 190 KRAAVDLDTHYSQEYLEEYVGSSTRRA-ILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
..+.+...+....... .....+... . .. .....+++|+++++
T Consensus 215 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-----~~--~~~~~i~~Pvl~i~ 257 (319)
T 2hfk_A 215 -----------GEGLFAGELEPMSDARLLAMGRYARF-------------------L-----AG--PRPGRSSAPVLLVR 257 (319)
T ss_dssp -----------HHHHHHTCSSCCCHHHHHHHHHHHHH-------------------H-----HS--CCCCCCCSCEEEEE
T ss_pred -----------hHHHHHhhccccchHHHHHHHHHHHH-------------------H-----Hh--CCCCCcCCCEEEEE
Confidence 0000100000000000 000000000 0 00 01356789999999
Q ss_pred ecCCccCCHHH-HHHHHHHhCCCeEEEEcCCCccccc-cCHHHHHHHHHHHHHhhcC
Q 015550 269 GRHDVIAQICY-ARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 269 G~~D~~~~~~~-~~~l~~~l~~~~~l~~~~ggH~~~~-e~p~~v~~~i~~fl~~~~~ 323 (405)
| +|.+++... ...+.+.+.++.+++.++|||+.++ ++++++++.|.+||++...
T Consensus 258 g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~g~H~~~~~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 258 A-SEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp E-SSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred c-CCCCCCccccccchhhcCCCCCEEEEeCCCcHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 9 999888765 4455554434689999999999755 7999999999999987654
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-18 Score=161.44 Aligned_cols=230 Identities=15% Similarity=0.087 Sum_probs=142.7
Q ss_pred ccccCCEEEEEEEccC-CCCe-EEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 19 ALNDNGIKIFYRTYGR-GPTK-VILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-~~p~-vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.+..+|+.+ |...+. ..++ ||++||.+ ++...|..++..|+.. .||.|+++|+
T Consensus 62 ~~~~~g~~~-~~p~~~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~dy 119 (322)
T 3k6k_A 62 LTDLGGVPC-IRQATDGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQ---------------------SSATLWSLDY 119 (322)
T ss_dssp EEEETTEEE-EEEECTTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHH---------------------HTCEEEEECC
T ss_pred EEEECCEeE-EecCCCCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHh---------------------cCCEEEEeeC
Confidence 356788888 665554 3456 99999976 6667788888888751 2999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCCCCC
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDH-LGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCC 168 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~ 168 (405)
|+.+.+..+ ..+++..+.+..+.++ ++.++++|+|||+||.+|+.+|..+|++ ++++|++++........
T Consensus 120 r~~~~~~~~-----~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~ 194 (322)
T 3k6k_A 120 RLAPENPFP-----AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSR 194 (322)
T ss_dssp CCTTTSCTT-----HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCS
T ss_pred CCCCCCCCc-----hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCc
Confidence 998766432 2355555555555555 5567999999999999999999998876 99999999864211100
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
. .. ..............+. .....+.... ..... . .
T Consensus 195 ~-----~~--------------~~~~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~-~---~------- 230 (322)
T 3k6k_A 195 W-----SN--------------SNLADRDFLAEPDTLG----------EMSELYVGGE----DRKNP-L---I------- 230 (322)
T ss_dssp H-----HH--------------HHTGGGCSSSCHHHHH----------HHHHHHHTTS----CTTCT-T---T-------
T ss_pred c-----ch--------------hhccCCCCcCCHHHHH----------HHHHHhcCCC----CCCCC-c---C-------
Confidence 0 00 0000000000111110 0111111100 00000 0 0
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-----cCHHHHHHHHHHHHH
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIK 319 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-----e~p~~v~~~i~~fl~ 319 (405)
......+ ....|+|+++|++|.++ ..++.+++++ ..++++++++| +|.+.. +.++++.+.+.+||+
T Consensus 231 --sp~~~~~-~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~ 305 (322)
T 3k6k_A 231 --SPVYADL-SGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWIS 305 (322)
T ss_dssp --CGGGSCC-TTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred --Ccccccc-cCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHH
Confidence 0000111 12369999999999984 4555555555 35689999999 997654 457899999999998
Q ss_pred hhcCC
Q 015550 320 ASEKK 324 (405)
Q Consensus 320 ~~~~~ 324 (405)
+....
T Consensus 306 ~~l~~ 310 (322)
T 3k6k_A 306 ARISK 310 (322)
T ss_dssp TTCC-
T ss_pred HHHhc
Confidence 87543
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-19 Score=167.69 Aligned_cols=213 Identities=15% Similarity=0.090 Sum_probs=130.0
Q ss_pred CCeEEEEecCCC---CCCc--hhhhHhhhc-CCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCC
Q 015550 36 PTKVILITGLAG---THDA--WGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (405)
Q Consensus 36 ~p~vvllHG~~~---~~~~--~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~ 109 (405)
.|+||++||++. +... |..++..|+ + .||.|+++|+||.+.+..+ ..
T Consensus 113 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~----------------------~g~~vv~~d~rg~~~~~~~-----~~ 165 (351)
T 2zsh_A 113 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGL----------------------CKCVVVSVNYRRAPENPYP-----CA 165 (351)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH----------------------HTSEEEEECCCCTTTSCTT-----HH
T ss_pred ceEEEEECCCcCcCCCCcchhHHHHHHHHHHH----------------------cCCEEEEecCCCCCCCCCc-----hh
Confidence 367999999654 3333 888888887 4 3999999999998765322 22
Q ss_pred HHHHHHHHHHHHHH------hCCc-cEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccCCCCCCCCccchhHHHHHH
Q 015550 110 TKIMAKDVIALMDH------LGWK-QAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (405)
Q Consensus 110 ~~~~~~dl~~~l~~------l~~~-~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
.++..+.+..+.+. ++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++........+ ..
T Consensus 166 ~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~-----~~--- 237 (351)
T 2zsh_A 166 YDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTE-----SE--- 237 (351)
T ss_dssp HHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCH-----HH---
T ss_pred HHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCCh-----hh---
Confidence 44444444444432 3456 99999999999999999999998 8999999998642221100 00
Q ss_pred HHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhh
Q 015550 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (405)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (405)
..... ....... ....+...+........... .+ ........+..
T Consensus 238 ~~~~~------------~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~l~~ 282 (351)
T 2zsh_A 238 KSLDG------------KYFVTVR--------------DRDWYWKAFLPEGEDREHPA---CN------PFSPRGKSLEG 282 (351)
T ss_dssp HHHTT------------TSSCCHH--------------HHHHHHHHHSCTTCCTTSTT---TC------TTSTTSCCCTT
T ss_pred hhcCC------------CcccCHH--------------HHHHHHHHhCCCCCCCCCcc---cC------CCCCCccchhh
Confidence 00000 0000000 00111111110000000000 00 00011234455
Q ss_pred cCC-cEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc----cCHHHHHHHHHHHHHh
Q 015550 260 AGF-LVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH----ERTEEVNQALIDLIKA 320 (405)
Q Consensus 260 i~~-Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~----e~p~~v~~~i~~fl~~ 320 (405)
+++ |+|+++|++|.+++ ..+.+++.+ ..+++++++++ ||.++. ++++++.+.|.+||++
T Consensus 283 i~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 283 VSFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp CCCCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 666 99999999999886 334444444 35799999998 998887 7899999999999974
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.82 E-value=8.2e-20 Score=167.12 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=82.2
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
.+.++|||+||++++...|..+++.| .++|+++|+++. ...++++++
T Consensus 22 ~~~~~l~~~hg~~~~~~~~~~~~~~L-------------------------~~~v~~~d~~~~--------~~~~~~~~~ 68 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTTVFHSLASRL-------------------------SIPTYGLQCTRA--------APLDSIHSL 68 (283)
T ss_dssp SSSCCEEEECCTTCCSGGGHHHHHHC-------------------------SSCEEEECCCTT--------SCCSCHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHhc-------------------------CceEEEEecCCC--------CCCCCHHHH
Confidence 34567999999999999999999887 268999999642 125689999
Q ss_pred HHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhC---Ccccc---eEEEeccCC
Q 015550 114 AKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV---PERVL---SLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~---p~~v~---~lvl~~~~~ 162 (405)
++++.++++.++. ++++++||||||.+|+.+|.+. |++|. ++|++++.+
T Consensus 69 a~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 69 AAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp HHHHHHHHTTTCCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred HHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 9999999999864 7999999999999999999876 88899 999999863
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.1e-19 Score=156.95 Aligned_cols=204 Identities=16% Similarity=0.141 Sum_probs=133.4
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCe--EEEEecCCCCCCCCCCC---------
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI--EVCAFDNRGMGRSSVPV--------- 103 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~--~Vi~~D~~G~G~S~~~~--------- 103 (405)
..+||||+||++++...|..+++.|.+ +|+ +|+.+|.+++|.+....
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~----------------------~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P 62 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALN----------------------KNVTNEVITARVSSEGKVYFDKKLSEDAANP 62 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHT----------------------TTSCSCEEEEEECSSCCEEESSCCC--CCSC
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHH----------------------cCCCceEEEEEECCCCCEEEccccccccCCC
Confidence 345799999999999999999999988 364 79999999998752110
Q ss_pred -------CCCCCCHHHHHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccCCCCCCC
Q 015550 104 -------KKTEYTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQC 167 (405)
Q Consensus 104 -------~~~~~~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~ 167 (405)
.....++.++++++.++++. +++++++++||||||.+++.++.++|+ +|+++|+++++..+...
T Consensus 63 ~i~v~f~~n~~~~~~~~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~ 142 (249)
T 3fle_A 63 IVKVEFKDNKNGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILN 142 (249)
T ss_dssp EEEEEESSTTCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTT
T ss_pred eEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccc
Confidence 00122455566666665554 488999999999999999999999874 79999999987533211
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
... .+... .+.. ..........++.
T Consensus 143 ~~~----------------~~~~~-------~~~~------~g~p~~~~~~~~~-------------------------- 167 (249)
T 3fle_A 143 MNE----------------NVNEI-------IVDK------QGKPSRMNAAYRQ-------------------------- 167 (249)
T ss_dssp TSS----------------CTTTS-------CBCT------TCCBSSCCHHHHH--------------------------
T ss_pred ccC----------------Ccchh-------hhcc------cCCCcccCHHHHH--------------------------
Confidence 000 00000 0000 0000000000010
Q ss_pred ccChhhhhhhhhcCCcEEEEeec------CCccCCHHHHHHHHHHhCC---CeEEEEcC--C-CccccccCHHHHHHHHH
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYP---VARMIDLP--G-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~------~D~~~~~~~~~~l~~~l~~---~~~l~~~~--g-gH~~~~e~p~~v~~~i~ 315 (405)
+. .....++..++|||.|+|+ .|.++|...++.+...+.. ..+.+.+. . .|...++++ +|.+.|.
T Consensus 168 -l~-~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~ 244 (249)
T 3fle_A 168 -LL-SLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEII 244 (249)
T ss_dssp -TG-GGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHH
T ss_pred -HH-HHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHH
Confidence 00 1123345467999999998 7999999988766654422 23444454 3 699999987 8999999
Q ss_pred HHH
Q 015550 316 DLI 318 (405)
Q Consensus 316 ~fl 318 (405)
+||
T Consensus 245 ~FL 247 (249)
T 3fle_A 245 QFL 247 (249)
T ss_dssp HHH
T ss_pred HHh
Confidence 998
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=166.41 Aligned_cols=224 Identities=12% Similarity=0.087 Sum_probs=133.4
Q ss_pred cCCEEEEEEEccC-----CCCeEEEEec---CCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 22 DNGIKIFYRTYGR-----GPTKVILITG---LAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 22 ~~g~~i~y~~~G~-----~~p~vvllHG---~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.++..+.++.+.+ ..|+||++|| ++++...|..++..|+.. .||.|+++|+
T Consensus 55 ~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~d~ 113 (310)
T 2hm7_A 55 LPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKD---------------------GRAVVFSVDY 113 (310)
T ss_dssp ETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HTSEEEEECC
T ss_pred cCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChhHhHHHHHHHHHh---------------------cCCEEEEeCC
Confidence 3344666655533 2368999999 778888999999999761 2899999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hC--CccEEEEEEChhHHHHHHHHHhCCc----ccceEEEecc
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDH-------LG--WKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNV 160 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-------l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~ 160 (405)
||+|.+..+. ..+|+.++++. ++ .++++|+||||||.+|+.+|.++|+ +++++|++++
T Consensus 114 rg~~~~~~~~---------~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p 184 (310)
T 2hm7_A 114 RLAPEHKFPA---------AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYP 184 (310)
T ss_dssp CCTTTSCTTH---------HHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESC
T ss_pred CCCCCCCCCc---------cHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcC
Confidence 9999874322 23333333332 23 3689999999999999999998887 6999999998
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhh
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
....... ...... ... ............ .....+....... ...
T Consensus 185 ~~~~~~~---~~~~~~---~~~------------~~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~---- 228 (310)
T 2hm7_A 185 STGYDPA---HPPASI---EEN------------AEGYLLTGGMML----------WFRDQYLNSLEEL----THP---- 228 (310)
T ss_dssp CCCCCTT---SCCHHH---HHT------------SSSSSSCHHHHH----------HHHHHHCSSGGGG----GCT----
T ss_pred CcCCCcc---cCCcch---hhc------------CCCCCCCHHHHH----------HHHHHhCCCCCcc----CCc----
Confidence 6422100 000000 000 000000110000 0111111100000 000
Q ss_pred hHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-----cCHHHHH
Q 015550 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVN 311 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-----e~p~~v~ 311 (405)
.........+..+ .|+++++|++|.++ ...+.+++.+ ..++++++++| ||.+.. +.++++.
T Consensus 229 -------~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~ 298 (310)
T 2hm7_A 229 -------WFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKAL 298 (310)
T ss_dssp -------TTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHH
T ss_pred -------cCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHH
Confidence 0000001122333 39999999999987 3455555554 34689999999 996553 5678999
Q ss_pred HHHHHHHHhh
Q 015550 312 QALIDLIKAS 321 (405)
Q Consensus 312 ~~i~~fl~~~ 321 (405)
+.+.+||++.
T Consensus 299 ~~i~~fl~~~ 308 (310)
T 2hm7_A 299 VRIAEKLRDA 308 (310)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999864
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=158.85 Aligned_cols=205 Identities=16% Similarity=0.124 Sum_probs=131.6
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC------CC----CCCC---
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG------RS----SVPV--- 103 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G------~S----~~~~--- 103 (405)
++|||+||++++...|..+++.|.+.... ...++++|..++| .+ ..+.
T Consensus 4 ~pvvllHG~~~~~~~~~~l~~~L~~~~~~-------------------~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~ 64 (254)
T 3ds8_A 4 IPIILIHGSGGNASSLDKMADQLMNEYRS-------------------SNEALTMTVNSEGKIKFEGKLTKDAKRPIIKF 64 (254)
T ss_dssp CCEEEECCTTCCTTTTHHHHHHHHHTTCC-------------------CCCEEEEEEETTTEEEEESCCCTTCSSCEEEE
T ss_pred CCEEEECCCCCCcchHHHHHHHHHHhcCC-------------------CceEEEEEEcCCCeEEEEEEeccCCCCCEEEE
Confidence 46999999999999999999999872100 1233443333332 22 1220
Q ss_pred --CCCCCCHHHHHHHHH----HHHHHhCCccEEEEEEChhHHHHHHHHHhCCc-----ccceEEEeccCCCCCCCCccch
Q 015550 104 --KKTEYTTKIMAKDVI----ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 104 --~~~~~~~~~~~~dl~----~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
....++++++++++. .+.+.++.++++++||||||++++.++.++|+ +|+++|+++++..+....
T Consensus 65 ~~~~~~~~~~~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~---- 140 (254)
T 3ds8_A 65 GFEQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPN---- 140 (254)
T ss_dssp EESSTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHH----
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccc----
Confidence 012468899999984 45556688899999999999999999999998 899999999874332100
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
. ....+.... .... ...+..+..
T Consensus 141 --------~----------~~~~~~~~~----------~p~~-~~~~~~~~~---------------------------- 163 (254)
T 3ds8_A 141 --------D----------NGMDLSFKK----------LPNS-TPQMDYFIK---------------------------- 163 (254)
T ss_dssp --------H----------HCSCTTCSS----------CSSC-CHHHHHHHH----------------------------
T ss_pred --------c----------ccccccccc----------CCcc-hHHHHHHHH----------------------------
Confidence 0 000000000 0000 000011000
Q ss_pred hhhhhhhcCCcEEEEeec------CCccCCHHHHHHHHHHhCCC---eEEEEcCC---CccccccCHHHHHHHHHHHHHh
Q 015550 253 DIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYPV---ARMIDLPG---GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~------~D~~~~~~~~~~l~~~l~~~---~~l~~~~g---gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
....+.. ++|++.|+|+ .|.++|...++.+...+... .+.+.+.| +|..++++| ++.+.|..||++
T Consensus 164 ~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~-~v~~~i~~fL~~ 241 (254)
T 3ds8_A 164 NQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETP-KSIEKTYWFLEK 241 (254)
T ss_dssp TGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSH-HHHHHHHHHHHT
T ss_pred HHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCH-HHHHHHHHHHHH
Confidence 0111222 6899999999 99999999999887766332 33344443 599999988 499999999988
Q ss_pred hcC
Q 015550 321 SEK 323 (405)
Q Consensus 321 ~~~ 323 (405)
...
T Consensus 242 ~~~ 244 (254)
T 3ds8_A 242 FKT 244 (254)
T ss_dssp CCC
T ss_pred hcC
Confidence 753
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6.7e-19 Score=164.09 Aligned_cols=221 Identities=14% Similarity=0.078 Sum_probs=131.5
Q ss_pred CCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 36 PTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 36 ~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.|+||++||++ ++...|..++..|... .||.|+++|+||+|.+..+.. ..+...
T Consensus 79 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~G~~Vv~~d~rg~~~~~~~~~--~~d~~~ 135 (323)
T 1lzl_A 79 VPVLLWIHGGGFAIGTAESSDPFCVEVARE---------------------LGFAVANVEYRLAPETTFPGP--VNDCYA 135 (323)
T ss_dssp EEEEEEECCSTTTSCCGGGGHHHHHHHHHH---------------------HCCEEEEECCCCTTTSCTTHH--HHHHHH
T ss_pred CcEEEEECCCccccCChhhhHHHHHHHHHh---------------------cCcEEEEecCCCCCCCCCCch--HHHHHH
Confidence 36899999998 7888898998888751 289999999999999864431 223333
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCCCCCccchhHHHHHHHHHhhcc
Q 015550 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (405)
Q Consensus 113 ~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (405)
.++.+.+.++.++. ++++|+||||||.+|+.+|.++|++ ++++|++++........+ .. ..+
T Consensus 136 ~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~-----~~---~~~---- 203 (323)
T 1lzl_A 136 ALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV-----SM---TNF---- 203 (323)
T ss_dssp HHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH-----HH---HHC----
T ss_pred HHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCch-----hH---HHh----
Confidence 44444444445565 5899999999999999999988764 999999998642111000 00 000
Q ss_pred ChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhcc-ccCcccchhhhHHhhhcccChhhhhhhhhcCCcEE
Q 015550 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATG-MQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (405)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (405)
.. ...+..... ......+........ ....... . .......+.. .+|++
T Consensus 204 -------~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~---~--------sp~~~~~~~~-~~P~l 253 (323)
T 1lzl_A 204 -------VD-TPLWHRPNA----------ILSWKYYLGESYSGPEDPDVSIY---A--------APSRATDLTG-LPPTY 253 (323)
T ss_dssp -------SS-CSSCCHHHH----------HHHHHHHHCTTCCCTTCSCCCTT---T--------CGGGCSCCTT-CCCEE
T ss_pred -------cc-CCCCCHHHH----------HHHHHHhCCCCcccccccCCCcc---c--------CcccCcccCC-CChhh
Confidence 00 000011000 001111111100000 0000000 0 0000001111 26999
Q ss_pred EEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc----cCHHHHHHHHHHHHHhhcC
Q 015550 266 VIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH----ERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 266 vi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~----e~p~~v~~~i~~fl~~~~~ 323 (405)
+++|++|.+++ ....+++++ ..++++++++| +|.... +.++++.+.+.+||++...
T Consensus 254 i~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 254 LSTMELDPLRD--EGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp EEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred eEECCcCCchH--HHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999874 444454444 35789999999 997543 3467899999999988754
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=161.73 Aligned_cols=222 Identities=13% Similarity=0.103 Sum_probs=133.4
Q ss_pred EEEEEEccC----CCCeEEEEecC---CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 26 KIFYRTYGR----GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 26 ~i~y~~~G~----~~p~vvllHG~---~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
.+.++.+-+ ..|+||++||. .++...|..++..|+.. .||.|+++|+||+|.
T Consensus 76 ~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~---------------------~g~~Vv~~Dyrg~~~ 134 (323)
T 3ain_A 76 NIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNS---------------------CQCVTISVDYRLAPE 134 (323)
T ss_dssp EEEEEEEECSSCSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HTSEEEEECCCCTTT
T ss_pred eEEEEEEecCCCCCCcEEEEECCCccccCChHHHHHHHHHHHHh---------------------cCCEEEEecCCCCCC
Confidence 555444322 34789999994 47888999999999751 289999999999998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH---h-CCccEEEEEEChhHHHHHHHHHhCCccc---ceEEEeccCCCCCCCCccc
Q 015550 99 SSVPVKKTEYTTKIMAKDVIALMDH---L-GWKQAHVFGHSMGAMIACKLAAMVPERV---LSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~~l~~---l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~ 171 (405)
+..+. ..++..+.+..+.+. + +.++++|+||||||.+|+.+|.++|+++ +++|+++|........
T Consensus 135 ~~~p~-----~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~--- 206 (323)
T 3ain_A 135 NKFPA-----AVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLIT--- 206 (323)
T ss_dssp SCTTH-----HHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCC---
T ss_pred CCCcc-----hHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCC---
Confidence 75332 233333333333333 3 4678999999999999999999998877 8999998863211110
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
... ..+.. ........+. .....|....... ... . ..
T Consensus 207 --~~~---~~~~~------------~~~l~~~~~~----------~~~~~~~~~~~~~---~~~-~-----------~s- 243 (323)
T 3ain_A 207 --KSL---YDNGE------------GFFLTREHID----------WFGQQYLRSFADL---LDF-R-----------FS- 243 (323)
T ss_dssp --HHH---HHHSS------------SSSSCHHHHH----------HHHHHHCSSGGGG---GCT-T-----------TC-
T ss_pred --ccH---HHhcc------------CCCCCHHHHH----------HHHHHhCCCCccc---CCc-c-----------cC-
Confidence 000 00000 0000111000 0011111100000 000 0 00
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-----cCHHHHHHHHHHHHHhhc
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIKASE 322 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-----e~p~~v~~~i~~fl~~~~ 322 (405)
.....+..+ .|+|+++|++|.+++ ....+++++ ..++++++++| +|.+.. +.++++.+.+.+||++..
T Consensus 244 p~~~~l~~l-~P~lii~G~~D~l~~--~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 244 PILADLNDL-PPALIITAEHDPLRD--QGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp GGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred cccCcccCC-CHHHEEECCCCccHH--HHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 000012222 399999999999874 344444443 35789999999 998876 456899999999998754
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-18 Score=178.12 Aligned_cols=225 Identities=16% Similarity=0.163 Sum_probs=145.2
Q ss_pred ccCCEEEEEEEccCC-------CCeEEEEecCCCCC---Cchh-hhHhhhc-CCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 21 NDNGIKIFYRTYGRG-------PTKVILITGLAGTH---DAWG-PQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 21 ~~~g~~i~y~~~G~~-------~p~vvllHG~~~~~---~~~~-~~~~~L~-~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
..+|..+.+..+.+. .|+||++||++++. ..|. .+...|. + +||.|
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~----------------------~G~~V 537 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST----------------------ENIIV 537 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TCCEE
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhc----------------------CCeEE
Confidence 678999998777542 26799999998773 3333 2334443 3 39999
Q ss_pred EEecCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHh---C---CccEEEEEEChhHHHHHHHHHhCCcccceEEEec
Q 015550 89 CAFDNRGMGRSSVPVK---KTEYTTKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (405)
Q Consensus 89 i~~D~~G~G~S~~~~~---~~~~~~~~~~~dl~~~l~~l---~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 159 (405)
+++|+||+|.+..... ...+. ....+|+.++++.+ + .++++|+||||||.+|+.+|.++|++++++|+++
T Consensus 538 v~~D~rG~g~~g~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 616 (740)
T 4a5s_A 538 ASFDGRGSGYQGDKIMHAINRRLG-TFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVA 616 (740)
T ss_dssp EEECCTTCSSSCHHHHGGGTTCTT-SHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEES
T ss_pred EEEcCCCCCcCChhHHHHHHhhhC-cccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcC
Confidence 9999999997643210 00111 01234444444443 2 2689999999999999999999999999999999
Q ss_pred cCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC--chhHHHHHHHHhhhhhccccCcccc
Q 015550 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGF 237 (405)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (405)
+..... .+...+.+.+.... .... ..+..
T Consensus 617 p~~~~~---------------------------------~~~~~~~~~~~~~p~~~~~~---~~~~~------------- 647 (740)
T 4a5s_A 617 PVSRWE---------------------------------YYDSVYTERYMGLPTPEDNL---DHYRN------------- 647 (740)
T ss_dssp CCCCGG---------------------------------GSBHHHHHHHHCCSSTTTTH---HHHHH-------------
T ss_pred CccchH---------------------------------HhhhHHHHHHcCCCCccccH---HHHHh-------------
Confidence 763100 00011111111111 0000 00000
Q ss_pred hhhhHHhhhcccChhhhhhhhhcCC-cEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccc-cccCHHHHH
Q 015550 238 DGQIHACWMHKMTQKDIQTIRSAGF-LVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLV-SHERTEEVN 311 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~-~~e~p~~v~ 311 (405)
......+.++++ |+|++||++|..+|++.+.++++.+ ..+.+++++++ ||.+ ..+.++++.
T Consensus 648 -------------~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 714 (740)
T 4a5s_A 648 -------------STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIY 714 (740)
T ss_dssp -------------SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHH
T ss_pred -------------CCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHH
Confidence 011233455666 9999999999999999999888877 34578999998 9988 567889999
Q ss_pred HHHHHHHHhhcCCCCCCCC
Q 015550 312 QALIDLIKASEKKISPQDW 330 (405)
Q Consensus 312 ~~i~~fl~~~~~~~~~~~~ 330 (405)
+.+.+||++......+..|
T Consensus 715 ~~i~~fl~~~l~~~~~~~~ 733 (740)
T 4a5s_A 715 THMSHFIKQCFSLPAAASW 733 (740)
T ss_dssp HHHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHHcCCCCCccc
Confidence 9999999998765544444
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=165.18 Aligned_cols=225 Identities=14% Similarity=-0.026 Sum_probs=135.1
Q ss_pred CeEEEEecCC---CCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 37 TKVILITGLA---GTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 37 p~vvllHG~~---~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
|+||++||++ ++.. .|..++..|++ +||.|+++|+||+|.|+.... .....+
T Consensus 110 p~vv~iHGgg~~~g~~~~~~~~~~~~~la~----------------------~g~~vv~~d~r~~gg~~~~~~-~~~~~~ 166 (361)
T 1jkm_A 110 PGLVYTHGGGMTILTTDNRVHRRWCTDLAA----------------------AGSVVVMVDFRNAWTAEGHHP-FPSGVE 166 (361)
T ss_dssp EEEEEECCSTTTSSCSSSHHHHHHHHHHHH----------------------TTCEEEEEECCCSEETTEECC-TTHHHH
T ss_pred eEEEEEcCCccccCCCcccchhHHHHHHHh----------------------CCCEEEEEecCCCCCCCCCCC-CCccHH
Confidence 6899999987 7777 78888998885 399999999999976542111 122223
Q ss_pred H---HHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh-----CCcccceEEEeccCCCCCCCCccchhHHHHHHHHHh
Q 015550 112 I---MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-----VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (405)
Q Consensus 112 ~---~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (405)
+ .++++.+.++.++.++++|+|||+||.+++.++.. +|++++++|++++......... ......
T Consensus 167 D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~---~~~~~~----- 238 (361)
T 1jkm_A 167 DCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWD---HERRLT----- 238 (361)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSC---HHHHHH-----
T ss_pred HHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccc---cccccc-----
Confidence 3 34455555566677899999999999999999998 8889999999998743211100 000000
Q ss_pred hccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (405)
........ ....... .....+...+............ .........+..+. |
T Consensus 239 --~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~l~~l~-P 290 (361)
T 1jkm_A 239 --ELPSLVEN--DGYFIEN--------------GGMALLVRAYDPTGEHAEDPIA---------WPYFASEDELRGLP-P 290 (361)
T ss_dssp --HCTHHHHT--TTSSSCH--------------HHHHHHHHHHSSSSTTTTCTTT---------CGGGCCHHHHTTCC-C
T ss_pred --cCcchhhc--cCcccCH--------------HHHHHHHHHhCCCCCCCCCccc---------CccccChhhHcCCC-c
Confidence 00000000 0000000 0111111111110000000000 00000123345555 9
Q ss_pred EEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccc-c-----cCH-HHHHHHHHHHHHhhc
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-H-----ERT-EEVNQALIDLIKASE 322 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~-~-----e~p-~~v~~~i~~fl~~~~ 322 (405)
+|+++|++|.+++ .++.+++.+ ..++++++++| ||.++ . ++. +++.+.|.+||++..
T Consensus 291 ~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 291 FVVAVNELDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp EEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9999999999987 555565554 35679999999 99877 3 444 889999999998753
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-20 Score=167.33 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=84.2
Q ss_pred CeEEEEecCCCCC---CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 37 TKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 37 p~vvllHG~~~~~---~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
++|||+||++++. ..|..+.+.|.+.+ .|++|+++|+ |||.|.........++.+.
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~--------------------~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~ 64 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKI--------------------PGIHVLSLEI-GKTLREDVENSFFLNVNSQ 64 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHS--------------------TTCCEEECCC-SSSHHHHHHHHHHSCHHHH
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHC--------------------CCcEEEEEEe-CCCCccccccccccCHHHH
Confidence 4599999999988 78999999997621 1779999998 9998752211112466677
Q ss_pred HHHHHHHHHHhC-C-ccEEEEEEChhHHHHHHHHHhCCcc-cceEEEeccCCCCC
Q 015550 114 AKDVIALMDHLG-W-KQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGF 165 (405)
Q Consensus 114 ~~dl~~~l~~l~-~-~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 165 (405)
++++.+.++.+. . ++++++||||||.+|..+|.++|++ |+++|+++++..+.
T Consensus 65 ~~~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~g~ 119 (279)
T 1ei9_A 65 VTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGV 119 (279)
T ss_dssp HHHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTCB
T ss_pred HHHHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCccCCc
Confidence 777777776532 1 6899999999999999999999984 99999999875544
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-18 Score=176.70 Aligned_cols=219 Identities=15% Similarity=0.146 Sum_probs=142.7
Q ss_pred cccCCEEEEEEEccC-------CCCeEEEEecCCCCCC---chh-hhHhhhc-CCCCCCCCchhhhccccCCCCCCCCeE
Q 015550 20 LNDNGIKIFYRTYGR-------GPTKVILITGLAGTHD---AWG-PQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIE 87 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-------~~p~vvllHG~~~~~~---~~~-~~~~~L~-~~~~~~~~~~~~~~~~~~~~l~~~g~~ 87 (405)
+..++.++++..+.+ ..|+||++||++++.. .|. .+...|. + +||.
T Consensus 473 ~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~----------------------~G~~ 530 (719)
T 1z68_A 473 LEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASK----------------------EGMV 530 (719)
T ss_dssp EEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHT----------------------TCCE
T ss_pred EecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhc----------------------CCeE
Confidence 334457888776643 2357999999988753 343 3444453 4 3999
Q ss_pred EEEecCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEe
Q 015550 88 VCAFDNRGMGRSSVPVKK---TEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (405)
Q Consensus 88 Vi~~D~~G~G~S~~~~~~---~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 158 (405)
|+++|+||+|.+...... ..+. ....+|+.++++.+ +.++++++||||||.+++.+|.++|++++++|++
T Consensus 531 v~~~d~rG~g~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 609 (719)
T 1z68_A 531 IALVDGRGTAFQGDKLLYAVYRKLG-VYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAV 609 (719)
T ss_dssp EEEEECTTBSSSCHHHHGGGTTCTT-HHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEE
T ss_pred EEEEcCCCCCCCchhhHHHHhhccC-cccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEc
Confidence 999999999998532100 0111 22345555555443 2358999999999999999999999999999999
Q ss_pred ccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccch
Q 015550 159 NVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238 (405)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (405)
++...... .. ..+...+........ ....+..
T Consensus 610 ~~~~~~~~----~~-----------------------------~~~~~~~~g~~~~~~-~~~~~~~-------------- 641 (719)
T 1z68_A 610 APVSSWEY----YA-----------------------------SVYTERFMGLPTKDD-NLEHYKN-------------- 641 (719)
T ss_dssp SCCCCTTT----SB-----------------------------HHHHHHHHCCSSTTT-THHHHHH--------------
T ss_pred CCccChHH----hc-----------------------------cccchhhcCCccccc-chhhhhh--------------
Confidence 87631110 00 000011111000000 0000000
Q ss_pred hhhHHhhhcccChhhhhhhhhcCC-cEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 239 GQIHACWMHKMTQKDIQTIRSAGF-LVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~-Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
.+....+.++++ |+|+++|++|..+|++.++++++.+ ....+++++++ ||.+..+.++++.+.
T Consensus 642 ------------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 709 (719)
T 1z68_A 642 ------------STVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTH 709 (719)
T ss_dssp ------------TCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHH
T ss_pred ------------CCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHH
Confidence 011233456677 8999999999999999999998876 23568999998 999977789999999
Q ss_pred HHHHHHhh
Q 015550 314 LIDLIKAS 321 (405)
Q Consensus 314 i~~fl~~~ 321 (405)
+.+||++.
T Consensus 710 i~~fl~~~ 717 (719)
T 1z68_A 710 MTHFLKQC 717 (719)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999875
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.5e-19 Score=157.13 Aligned_cols=199 Identities=9% Similarity=0.083 Sum_probs=132.9
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+.++|||+||++++...|.++++.|.. +++|+++|+||++ +++
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~g~~--------------~~~ 63 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLNH-----------------------KAAVYGFHFIEED--------------SRI 63 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTTT-----------------------TSEEEEECCCCST--------------THH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCC-----------------------CceEEEEcCCCHH--------------HHH
Confidence 345799999999999999999999986 8999999999873 256
Q ss_pred HHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhC---CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhh
Q 015550 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEK 190 (405)
Q Consensus 115 ~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (405)
+++.+.++.+. .++++++||||||.+|+.+|.+. ++++.++|++++..... ...... .
T Consensus 64 ~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~-~~~~~~----------------~- 125 (244)
T 2cb9_A 64 EQYVSRITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQ-SITADT----------------E- 125 (244)
T ss_dssp HHHHHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCS-CCCCC-------------------
T ss_pred HHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcc-cccccc----------------c-
Confidence 77888888875 57899999999999999999876 57899999999764311 000000 0
Q ss_pred hhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeec
Q 015550 191 RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (405)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~ 270 (405)
...+..++ .......+...+ .....++. .......+++|+++++|+
T Consensus 126 -----------~~~~~~~~-----~~~~~~~~~~~~------------~~~~~~~~------~~~~~~~i~~Pvl~i~g~ 171 (244)
T 2cb9_A 126 -----------NDDSAAYL-----PEAVRETVMQKK------------RCYQEYWA------QLINEGRIKSNIHFIEAG 171 (244)
T ss_dssp ----------------CCS-----CHHHHHHHTHHH------------HHHHHHHH------HCCCCSCBSSEEEEEECS
T ss_pred -----------HHHHHHHh-----HHHHHHHHHHHH------------HHHHHHHH------hhccCCCcCCCEEEEEcc
Confidence 00000000 000000110000 00000000 001245678999999999
Q ss_pred --CCccCCHHHHHHHHHHhCCCeEEEEcCCCc--cccccCHHHHHHHHHHHHHhhcC
Q 015550 271 --HDVIAQICYARRLAEKLYPVARMIDLPGGH--LVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 271 --~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH--~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
+|.+ +++....+.+.+.++.+++.++||| ++..++++++++.|.+||.+...
T Consensus 172 ~~~D~~-~~~~~~~w~~~~~~~~~~~~i~ggH~~~~~~~~~~~~~~~i~~~L~~~~~ 227 (244)
T 2cb9_A 172 IQTETS-GAMVLQKWQDAAEEGYAEYTGYGAHKDMLEGEFAEKNANIILNILDKINS 227 (244)
T ss_dssp BCSCCC-HHHHTTSSGGGBSSCEEEEECSSBGGGTTSHHHHHHHHHHHHHHHHTC--
T ss_pred Cccccc-cccchhHHHHhcCCCCEEEEecCChHHHcChHHHHHHHHHHHHHHhcCcc
Confidence 8874 4454555555444578999999999 77778899999999999986543
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-19 Score=182.04 Aligned_cols=215 Identities=13% Similarity=0.177 Sum_probs=141.1
Q ss_pred cCCEEEEEEEccC-------CCCeEEEEecCCCCC---Cchh--hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 22 DNGIKIFYRTYGR-------GPTKVILITGLAGTH---DAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 22 ~~g~~i~y~~~G~-------~~p~vvllHG~~~~~---~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
.+| ++.+..+-+ ..|+||++||++++. ..|. .....|.+ +||.|+
T Consensus 476 ~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~----------------------~G~~vv 532 (723)
T 1xfd_A 476 DDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSS----------------------HGAVVV 532 (723)
T ss_dssp TTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TCCEEE
T ss_pred CCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhc----------------------CCEEEE
Confidence 355 777665543 236799999998763 3343 45556665 399999
Q ss_pred EecCCCCCCCCC------CCCCCCCCHHHHHHHHHHHHHH--hCCccEEEEEEChhHHHHHHHHHhC----CcccceEEE
Q 015550 90 AFDNRGMGRSSV------PVKKTEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMV----PERVLSLAL 157 (405)
Q Consensus 90 ~~D~~G~G~S~~------~~~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl 157 (405)
++|+||+|.+.. .........+++.+.+..+.+. ++.++++|+||||||.+++.+|.++ |++++++|+
T Consensus 533 ~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~ 612 (723)
T 1xfd_A 533 KCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSA 612 (723)
T ss_dssp CCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEE
T ss_pred EECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEE
Confidence 999999998521 1111122344444444443332 1246899999999999999999999 999999999
Q ss_pred eccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccc
Q 015550 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (405)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (405)
+++...... . ...+...+..... .. .. .+
T Consensus 613 ~~~~~~~~~----~-----------------------------~~~~~~~~~~~~~---------------~~-~~--~~ 641 (723)
T 1xfd_A 613 LSPITDFKL----Y-----------------------------ASAFSERYLGLHG---------------LD-NR--AY 641 (723)
T ss_dssp ESCCCCTTS----S-----------------------------BHHHHHHHHCCCS---------------SC-CS--ST
T ss_pred ccCCcchHH----h-----------------------------hhhccHhhcCCcc---------------CC-hh--HH
Confidence 997631110 0 0000000000000 00 00 00
Q ss_pred hhhhHHhhhcccChhhhhhhhhcC-CcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccc-cccCHHHHH
Q 015550 238 DGQIHACWMHKMTQKDIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLV-SHERTEEVN 311 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~-~~e~p~~v~ 311 (405)
........+.+++ +|+|+++|++|.++|++.++++++.+ ..+++++++++ ||.+ ..+.++++.
T Consensus 642 -----------~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 710 (723)
T 1xfd_A 642 -----------EMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLY 710 (723)
T ss_dssp -----------TTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHH
T ss_pred -----------HhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHH
Confidence 0011224456777 89999999999999999999988877 35679999998 9998 567899999
Q ss_pred HHHHHHHHhh
Q 015550 312 QALIDLIKAS 321 (405)
Q Consensus 312 ~~i~~fl~~~ 321 (405)
+.+.+||++.
T Consensus 711 ~~i~~fl~~~ 720 (723)
T 1xfd_A 711 RSIINFFVEC 720 (723)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHH
Confidence 9999999764
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-20 Score=170.64 Aligned_cols=195 Identities=14% Similarity=0.130 Sum_probs=131.3
Q ss_pred CCCeEEEEecC---CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHH
Q 015550 35 GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (405)
Q Consensus 35 ~~p~vvllHG~---~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 111 (405)
..|+||++||. .++...|..++..|.+ +||.|+++|+||+|.+. ..
T Consensus 81 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~r~~~~~~---------~~ 129 (303)
T 4e15_A 81 QAPLFVFVHGGYWQEMDMSMSCSIVGPLVR----------------------RGYRVAVMDYNLCPQVT---------LE 129 (303)
T ss_dssp TCCEEEEECCSTTTSCCGGGSCTTHHHHHH----------------------TTCEEEEECCCCTTTSC---------HH
T ss_pred CCCEEEEECCCcCcCCChhHHHHHHHHHHh----------------------CCCEEEEecCCCCCCCC---------hh
Confidence 45789999994 3556667788888876 49999999999998753 23
Q ss_pred HHHHHHHHHH-------HHhCCccEEEEEEChhHHHHHHHHHhCC-------cccceEEEeccCCCCCCCCccchhHHHH
Q 015550 112 IMAKDVIALM-------DHLGWKQAHVFGHSMGAMIACKLAAMVP-------ERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (405)
Q Consensus 112 ~~~~dl~~~l-------~~l~~~~v~lvGhS~Gg~ia~~~a~~~p-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (405)
...+|+.+++ +.++.++++|+||||||.+|+.++.+.+ ++|+++|++++... ....
T Consensus 130 ~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~---------~~~~- 199 (303)
T 4e15_A 130 QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYD---------LREL- 199 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCC---------CHHH-
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeec---------cHhh-
Confidence 3333333333 3557789999999999999999998654 37999999997631 0000
Q ss_pred HHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh
Q 015550 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (405)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (405)
..... .+....+..... . +. .. ......+
T Consensus 200 -----~~~~~---------------~~~~~~~~~~~~---------------~------~~-~~---------sp~~~~~ 228 (303)
T 4e15_A 200 -----SNLES---------------VNPKNILGLNER---------------N------IE-SV---------SPMLWEY 228 (303)
T ss_dssp -----HTCTT---------------TSGGGTTCCCTT---------------T------TT-TT---------CGGGCCC
T ss_pred -----hcccc---------------cchhhhhcCCHH---------------H------HH-Hc---------Cchhhcc
Confidence 00000 000000000000 0 00 00 0000111
Q ss_pred ----hhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 258 ----RSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 258 ----~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..+++|+|+++|++|.+++.+.++++++.+ ..++++++++| ||+.+.+...+.+..+.+||.+.
T Consensus 229 ~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 229 TDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp CCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHHH
T ss_pred cccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHHh
Confidence 234799999999999999999999998877 34679999998 99999999988888888888764
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-17 Score=150.67 Aligned_cols=241 Identities=12% Similarity=0.046 Sum_probs=139.1
Q ss_pred ccCCEEEEEEEcc-CCCCeEEEEecCC---CCCCch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 21 NDNGIKIFYRTYG-RGPTKVILITGLA---GTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 21 ~~~g~~i~y~~~G-~~~p~vvllHG~~---~~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
..+|..+.+.... ...|+||++||++ ++...| ..+...+.+ .||.|+++|+|+
T Consensus 11 ~~~~~~~~~y~p~~~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~----------------------~g~~Vi~vdYrl 68 (274)
T 2qru_A 11 LANGATVTIYPTTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTS----------------------NGYTVLALDYLL 68 (274)
T ss_dssp CTTSCEEEEECCSSSSCEEEEEECCSTTTSCCGGGCCHHHHHHHHT----------------------TTEEEEEECCCC
T ss_pred ccCCeeEEEEcCCCCCCcEEEEEeCccccCCChhhchHHHHHHHHH----------------------CCCEEEEeCCCC
Confidence 3467777765543 3456899999988 555555 556676766 499999999997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CccEEEEEEChhHHHHHHHHH---hCCcccceEEEeccCCCCCCC
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAA---MVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~ 167 (405)
... ..+...++|+.++++.+. .++++|+|+|+||.+|+.++. ..|.++++++++.+.......
T Consensus 69 aPe---------~~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~ 139 (274)
T 2qru_A 69 APN---------TKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFI 139 (274)
T ss_dssp TTT---------SCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGG
T ss_pred CCC---------CCCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccccccc
Confidence 532 256667777777776653 689999999999999999997 357789999998765321000
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHH----HHhhhhhccccCcccchhhhHH
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQE----YVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
.+.. . ........................ +... ........ +......... ....
T Consensus 140 ~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~---- 198 (274)
T 2qru_A 140 KEPR--K------LLKQAISAKEIAAIDQTKPVWDDP----FLSR-YLLYHYSIQQALLPHFYGLPEN----GDWS---- 198 (274)
T ss_dssp GSCC--C------SCSSCCCSGGGTTSCCSSCCSCCT----TCTT-HHHHHHHHHTTCHHHHHTCCTT----SCCG----
T ss_pred CCch--h------hccccccHHHHhhhcccCCCCCCc----cccc-hhhhhhhhhhcchhhccCcccc----cccc----
Confidence 0000 0 000000000000000000000000 0000 00000000 0000000000 0000
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHH----HHHHHHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE----EVNQALIDLI 318 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~----~v~~~i~~fl 318 (405)
...... ..+..+ .|+++++|+.|.+++...++++++.+ +++++++++| +|.++.+.+. ++.+.+.+||
T Consensus 199 --~~~~~~---~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~-~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl 271 (274)
T 2qru_A 199 --AYALSD---ETLKTF-PPCFSTASSSDEEVPFRYSKKIGRTI-PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWL 271 (274)
T ss_dssp --GGCCCH---HHHHTS-CCEEEEEETTCSSSCTHHHHHHHHHS-TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHH
T ss_pred --cCCCCh---hhhcCC-CCEEEEEecCCCCcCHHHHHHHHHhC-CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHH
Confidence 000011 234555 79999999999999999999999886 7899999998 9988765432 5677888888
Q ss_pred Hh
Q 015550 319 KA 320 (405)
Q Consensus 319 ~~ 320 (405)
++
T Consensus 272 ~~ 273 (274)
T 2qru_A 272 KE 273 (274)
T ss_dssp HT
T ss_pred hh
Confidence 65
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=155.28 Aligned_cols=192 Identities=15% Similarity=0.158 Sum_probs=126.4
Q ss_pred CCCeEEEEecCCCCCCchhh----hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----------------
Q 015550 35 GPTKVILITGLAGTHDAWGP----QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR---------------- 94 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~----~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~---------------- 94 (405)
..|+|||+||++++...|.. +.+.|.+ +||+|+++|.|
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~----------------------~g~~v~~~d~p~~~~~~~~~~~~~~~~ 61 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKK----------------------ANVQCDYIDAPVLLEKKDLPFEMDDEK 61 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHH----------------------TTCEEEEECCSEECCGGGCSSCCCHHH
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhh----------------------cceEEEEcCCCeeCCCcCccccccccc
Confidence 34689999999999998874 4455554 49999999999
Q ss_pred -----CCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc------ccceEEEec
Q 015550 95 -----GMGRSSVP----VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE------RVLSLALLN 159 (405)
Q Consensus 95 -----G~G~S~~~----~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~ 159 (405)
|+|.+... ......++++.++.+.+.++..+ .+++|+||||||.+|+.+|.+++. .++.+++++
T Consensus 62 ~~~~~g~g~~~~w~~~~~~~~~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~ 140 (243)
T 1ycd_A 62 WQATLDADVNRAWFYHSEISHELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVIS 140 (243)
T ss_dssp HHHHHHTTCCEESSCCCSSGGGCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEES
T ss_pred ccccCCCCCCcccccCCCCcchhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEec
Confidence 44544211 00012467777788877777655 678999999999999999987542 466777776
Q ss_pred cCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchh
Q 015550 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (405)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
+..... +. . . +. ... .+ ..
T Consensus 141 g~~~~~---~~-~----------------------~----~~--------~~~------------~~-----------~~ 159 (243)
T 1ycd_A 141 GYSFTE---PD-P----------------------E----HP--------GEL------------RI-----------TE 159 (243)
T ss_dssp CCCCEE---EC-T----------------------T----ST--------TCE------------EE-----------CG
T ss_pred CCCCCC---cc-c----------------------c----cc--------ccc------------cc-----------ch
Confidence 542100 00 0 0 00 000 00 00
Q ss_pred hhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC-------eEEEEcC-CCccccccCHHHHH
Q 015550 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-------ARMIDLP-GGHLVSHERTEEVN 311 (405)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~-------~~l~~~~-ggH~~~~e~p~~v~ 311 (405)
.. ......+..+++|+|+++|++|.++|++.++.+++.+ ++ ...+.++ +||.+..+ +++.
T Consensus 160 ~~---------~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~ 227 (243)
T 1ycd_A 160 KF---------RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIY-LKAQNGNKEKVLAYEHPGGHMVPNK--KDII 227 (243)
T ss_dssp GG---------TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHH-HHHTTTCTTTEEEEEESSSSSCCCC--HHHH
T ss_pred hH---------HHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHh-hhhccccccccEEEecCCCCcCCch--HHHH
Confidence 00 0001123557899999999999999999999998877 33 2444444 59987665 4699
Q ss_pred HHHHHHHHhhc
Q 015550 312 QALIDLIKASE 322 (405)
Q Consensus 312 ~~i~~fl~~~~ 322 (405)
+.|.+||++..
T Consensus 228 ~~i~~fl~~~~ 238 (243)
T 1ycd_A 228 RPIVEQITSSL 238 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998764
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-19 Score=163.59 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=84.2
Q ss_pred CCeEEEEecCCCCCCc-hh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 36 PTKVILITGLAGTHDA-WG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~-~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
+++|||+||++++... |. .+.+.|.+ +||+|+++|+||+|.++. ..+.+++
T Consensus 31 ~~~VvllHG~~~~~~~~~~~~l~~~L~~----------------------~G~~v~~~d~~g~g~~~~-----~~~~~~l 83 (317)
T 1tca_A 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQ----------------------LGYTPCWISPPPFMLNDT-----QVNTEYM 83 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHT----------------------TTCEEEEECCTTTTCSCH-----HHHHHHH
T ss_pred CCeEEEECCCCCCcchhhHHHHHHHHHh----------------------CCCEEEEECCCCCCCCcH-----HHHHHHH
Confidence 4579999999999886 98 88899987 499999999999997642 1234666
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCC
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~ 162 (405)
++.+..+++..+.++++++||||||.++..++..+| ++|+++|+++++.
T Consensus 84 ~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 84 VNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCC
Confidence 777777777778899999999999999999988876 7899999999864
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-17 Score=149.06 Aligned_cols=118 Identities=19% Similarity=0.248 Sum_probs=86.2
Q ss_pred cCCEEEEEEEccC-------CCCeEEEEecCCCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 22 DNGIKIFYRTYGR-------GPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 22 ~~g~~i~y~~~G~-------~~p~vvllHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..|..+.+..+-+ ..|+||++||++++...|... ...+.. .|+.|+++
T Consensus 26 ~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~p 83 (280)
T 3i6y_A 26 TLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAE----------------------LGIAIVAP 83 (280)
T ss_dssp TTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHH----------------------HTCEEEEE
T ss_pred ccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhh----------------------CCeEEEEe
Confidence 4567777666533 236899999999999888764 333433 38999999
Q ss_pred cCCCCCCCCCCCCC-------------------CCCC-HHHHHHHHHHHHHH-hCC-ccEEEEEEChhHHHHHHHHHhCC
Q 015550 92 DNRGMGRSSVPVKK-------------------TEYT-TKIMAKDVIALMDH-LGW-KQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 92 D~~G~G~S~~~~~~-------------------~~~~-~~~~~~dl~~~l~~-l~~-~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
|.+++|.+...... ..+. ...+.+++..+++. +.. ++++|+||||||.+|+.+|.++|
T Consensus 84 d~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 163 (280)
T 3i6y_A 84 DTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNP 163 (280)
T ss_dssp CSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCT
T ss_pred CCcccccccCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCC
Confidence 99988765432210 0012 33345677777754 454 78999999999999999999999
Q ss_pred cccceEEEeccC
Q 015550 150 ERVLSLALLNVT 161 (405)
Q Consensus 150 ~~v~~lvl~~~~ 161 (405)
++++++|++++.
T Consensus 164 ~~~~~~v~~s~~ 175 (280)
T 3i6y_A 164 ERYQSVSAFSPI 175 (280)
T ss_dssp TTCSCEEEESCC
T ss_pred ccccEEEEeCCc
Confidence 999999999986
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=152.02 Aligned_cols=120 Identities=21% Similarity=0.222 Sum_probs=89.2
Q ss_pred ccCCEEEEEEEccC------CCCeEEEEecCCCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
...|..+.+..+-+ ..|+||++||++++...|... ...+.. .||.|+++
T Consensus 23 ~~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~ 80 (278)
T 3e4d_A 23 ETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASE----------------------LGLVVVCP 80 (278)
T ss_dssp TTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHH----------------------HTCEEEEC
T ss_pred cccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhh----------------------CCeEEEec
Confidence 34566777666543 236899999999999888763 333333 38999999
Q ss_pred cCCCCCCCCCCCC--------------------CCCCC-HHHHHHHHHHHHHHh-CC--ccEEEEEEChhHHHHHHHHHh
Q 015550 92 DNRGMGRSSVPVK--------------------KTEYT-TKIMAKDVIALMDHL-GW--KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 92 D~~G~G~S~~~~~--------------------~~~~~-~~~~~~dl~~~l~~l-~~--~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
|.||+|.|..... ...+. .+.+++++..+++.. ++ ++++++||||||.+|+.+|.+
T Consensus 81 d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 160 (278)
T 3e4d_A 81 DTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALK 160 (278)
T ss_dssp CSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred CCcccCcccccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHh
Confidence 9999998854330 00112 334456787877765 66 789999999999999999999
Q ss_pred CCcccceEEEeccCC
Q 015550 148 VPERVLSLALLNVTG 162 (405)
Q Consensus 148 ~p~~v~~lvl~~~~~ 162 (405)
+|+++++++++++..
T Consensus 161 ~p~~~~~~v~~~~~~ 175 (278)
T 3e4d_A 161 NPERFKSCSAFAPIV 175 (278)
T ss_dssp CTTTCSCEEEESCCS
T ss_pred CCcccceEEEeCCcc
Confidence 999999999999863
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-18 Score=149.12 Aligned_cols=206 Identities=14% Similarity=0.135 Sum_probs=129.9
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+.++|+|+||++++...|.++++.|. . ++|+++|+||+|. .+
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~-----------------------~-~~v~~~d~~g~~~--------------~~ 57 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLP-----------------------S-YKLCAFDFIEEED--------------RL 57 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCT-----------------------T-EEEEEECCCCSTT--------------HH
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcC-----------------------C-CeEEEecCCCHHH--------------HH
Confidence 34679999999999999999998884 3 9999999998763 45
Q ss_pred HHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCCCCCccchhHHH-HHHHHHhhccChh
Q 015550 115 KDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTL-SIAIRFFRAKTPE 189 (405)
Q Consensus 115 ~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 189 (405)
+++.++++.+.. ++++++||||||.+|+.+|.+.+ +++.++|++++...... ........ .....++...
T Consensus 58 ~~~~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--- 132 (230)
T 1jmk_C 58 DRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGV--SDLDGRTVESDVEALMNVN--- 132 (230)
T ss_dssp HHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCC--C--------CCHHHHHHHT---
T ss_pred HHHHHHHHHhCCCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcc--cccccccHHHHHHHHHhcC---
Confidence 677777887764 58999999999999999998764 67999999997642110 00000000 0000000000
Q ss_pred hhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEee
Q 015550 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (405)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G 269 (405)
..... . ........+.... .....+.. .......+++|+++++|
T Consensus 133 ----~~~~~-----~---------~~~~~~~~~~~~~------------~~~~~~~~------~~~~~~~~~~P~l~i~g 176 (230)
T 1jmk_C 133 ----RDNEA-----L---------NSEAVKHGLKQKT------------HAFYSYYV------NLISTGQVKADIDLLTS 176 (230)
T ss_dssp ----TTCSG-----G---------GSHHHHHHHHHHH------------HHHHHHHH------HCCCCSCBSSEEEEEEC
T ss_pred ----hhhhh-----h---------hhHHHHHHHHHHH------------HHHHHHhh------hccccccccccEEEEEe
Confidence 00000 0 0000000000000 00000000 00123578899999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCeEEEEcCCCc--cccccCHHHHHHHHHHHHHh
Q 015550 270 RHDVIAQICYARRLAEKLYPVARMIDLPGGH--LVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 270 ~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH--~~~~e~p~~v~~~i~~fl~~ 320 (405)
++|..++ .....+.+...++.+++.++||| ++..++++++++.|.+||.+
T Consensus 177 ~~D~~~~-~~~~~w~~~~~~~~~~~~i~g~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 177 GADFDIP-EWLASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp SSCCCCC-TTEECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCc-cccchHHHhcCCCeEEEEecCChHHHcCcHhHHHHHHHHHHHHhh
Confidence 9999887 33344444444568999999999 88888999999999999864
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-17 Score=151.82 Aligned_cols=224 Identities=17% Similarity=0.127 Sum_probs=132.3
Q ss_pred EEEEEEcc---CCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 26 KIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 26 ~i~y~~~G---~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
.|..+.+- .+.|+||++||.+ ++...|..++..|+.. .||.|+++|+|+.+..
T Consensus 74 ~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~---------------------~g~~V~~~dyr~~p~~ 132 (326)
T 3ga7_A 74 DVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARY---------------------TGCTVIGIDYSLSPQA 132 (326)
T ss_dssp CEEEEEEESSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HCSEEEEECCCCTTTS
T ss_pred CeEEEEEeCCCCCCcEEEEECCCCcccCChhhhHHHHHHHHHH---------------------cCCEEEEeeCCCCCCC
Confidence 55554443 3457899999998 8888999999888751 2999999999987655
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhCCcc------cceEEEeccCCCCCCCC
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMVPER------VLSLALLNVTGGGFQCC 168 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~------v~~lvl~~~~~~~~~~~ 168 (405)
..+. .+++..+.+..+.++ ++ .++++|+|||+||.+|+.+|.++|++ +++++++.+......
T Consensus 133 ~~~~-----~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~-- 205 (326)
T 3ga7_A 133 RYPQ-----AIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQD-- 205 (326)
T ss_dssp CTTH-----HHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSC--
T ss_pred CCCc-----HHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCC--
Confidence 3221 223333322223222 23 35899999999999999999988775 899999887531110
Q ss_pred ccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcc
Q 015550 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (405)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (405)
... ..... ........+. ...+...+......... .
T Consensus 206 ----~~~----~~~~~----------~~~~~l~~~~--------------~~~~~~~~~~~~~~~~~------------~ 241 (326)
T 3ga7_A 206 ----SVS----RRLFG----------GAWDGLTRED--------------LDMYEKAYLRNDEDRES------------P 241 (326)
T ss_dssp ----CHH----HHHCC----------CTTTTCCHHH--------------HHHHHHHHCSSGGGGGC------------T
T ss_pred ----Chh----Hhhhc----------CCCCCCCHHH--------------HHHHHHHhCCCCCccCC------------c
Confidence 000 00000 0000000100 01111111000000000 0
Q ss_pred cChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-----cCHHHHHHHHHHHHH
Q 015550 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIK 319 (405)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-----e~p~~v~~~i~~fl~ 319 (405)
........+.....|+++++|+.|.+++ ....+++++ ...+++++++| +|.+.. +..+++.+.+.+||+
T Consensus 242 ~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 319 (326)
T 3ga7_A 242 WYCLFNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFM 319 (326)
T ss_dssp TTSGGGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHH
Confidence 0000112233345699999999999984 455555544 34679999999 997753 346889999999998
Q ss_pred hhcC
Q 015550 320 ASEK 323 (405)
Q Consensus 320 ~~~~ 323 (405)
+...
T Consensus 320 ~~l~ 323 (326)
T 3ga7_A 320 ARMK 323 (326)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8653
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5.8e-17 Score=150.97 Aligned_cols=230 Identities=10% Similarity=0.071 Sum_probs=136.9
Q ss_pred cccCCEEEEEEEc-c-CCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 20 LNDNGIKIFYRTY-G-RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 20 ~~~~g~~i~y~~~-G-~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
+..+++.+.+... + ...|+||++||.+ ++...|..++..|+.. .||.|+++|+|
T Consensus 62 ~~~~~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~vv~~dyr 120 (322)
T 3fak_A 62 VTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRA---------------------SQAAALLLDYR 120 (322)
T ss_dssp EEETTEEEEEEECTTCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHH---------------------HTSEEEEECCC
T ss_pred EeeCCeEEEEEeCCCCCCccEEEEEcCCccccCChHHHHHHHHHHHHh---------------------cCCEEEEEeCC
Confidence 3456666665443 2 2357899999976 5556677888877651 29999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCCCCCc
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDH-LGWKQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~ 169 (405)
+.+.... ...+++..+.+..+.++ ++.++++|+|||+||.+|+.+|.+.|++ ++++|+++|........+
T Consensus 121 ~~p~~~~-----~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~ 195 (322)
T 3fak_A 121 LAPEHPF-----PAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND 195 (322)
T ss_dssp CTTTSCT-----THHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT
T ss_pred CCCCCCC-----CcHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCc
Confidence 8765432 22345555555555555 4456899999999999999999988775 999999998742211100
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
. ............ ..........+....... . ...
T Consensus 196 ~-------------------~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~----~-~~~----------- 230 (322)
T 3fak_A 196 S-------------------FKTRAEADPMVA----------PGGINKMAARYLNGADAK----H-PYA----------- 230 (322)
T ss_dssp H-------------------HHHTTTTCCSCC----------SSHHHHHHHHHHTTSCTT----C-TTT-----------
T ss_pred C-------------------HHHhCccCcccC----------HHHHHHHHHHhcCCCCCC----C-ccc-----------
Confidence 0 000000000000 000111111221110000 0 000
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-----cCHHHHHHHHHHHHHh
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIKA 320 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-----e~p~~v~~~i~~fl~~ 320 (405)
......+.. ..|+||++|+.|.++ .....+++++ ...+++++++| +|.+.. +..+++.+.+.+||++
T Consensus 231 -sp~~~~~~~-~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3fak_A 231 -SPNFANLKG-LPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMRE 306 (322)
T ss_dssp -CGGGSCCTT-CCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred -CCCcccccC-CChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHH
Confidence 000111122 249999999999885 3555555554 45689999999 997653 4468899999999988
Q ss_pred hcCC
Q 015550 321 SEKK 324 (405)
Q Consensus 321 ~~~~ 324 (405)
.-..
T Consensus 307 ~l~~ 310 (322)
T 3fak_A 307 QWAA 310 (322)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7543
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.4e-17 Score=166.93 Aligned_cols=226 Identities=13% Similarity=0.079 Sum_probs=144.4
Q ss_pred ccCCEEEEEEEcc-------CCCCeEEEEecCCCCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTYG-------RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~G-------~~~p~vvllHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..+|.+|.+.... ...|+||++||..+... .|......|.+ +||.|+++
T Consensus 424 ~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~ 481 (695)
T 2bkl_A 424 SKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLD----------------------AGGVYAVA 481 (695)
T ss_dssp CTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHH----------------------TTCEEEEE
T ss_pred CCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHh----------------------CCCEEEEE
Confidence 4578888776542 23478999999766554 56666665655 49999999
Q ss_pred cCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 92 DNRGMGRSSVPV--KKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 92 D~~G~G~S~~~~--~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
|+||+|.+.... ...........+|+.++++.+ +.++++++||||||.+++.++.++|++++++|+.++...
T Consensus 482 d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d 561 (695)
T 2bkl_A 482 NLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLD 561 (695)
T ss_dssp CCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred ecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccc
Confidence 999988764210 001112233456666666655 346899999999999999999999999999999987632
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
... .. . . . ....+...+ ..... ...+..+..
T Consensus 562 ~~~-~~--------------~-~--------~----~~~~~~~~~-g~~~~-~~~~~~~~~------------------- 592 (695)
T 2bkl_A 562 MVR-YH--------------L-F--------G----SGRTWIPEY-GTAEK-PEDFKTLHA------------------- 592 (695)
T ss_dssp TTT-GG--------------G-S--------T----TGGGGHHHH-CCTTS-HHHHHHHHH-------------------
T ss_pred hhh-cc--------------c-c--------C----CCcchHHHh-CCCCC-HHHHHHHHh-------------------
Confidence 110 00 0 0 0 000011111 11100 001111000
Q ss_pred hhhcccChhhhhhhhhcC--CcEEEEeecCCccCCHHHHHHHHHHhCC------CeEEEEcCC-Ccccc--ccCHHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAG--FLVSVIHGRHDVIAQICYARRLAEKLYP------VARMIDLPG-GHLVS--HERTEEVNQ 312 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~--~Pvlvi~G~~D~~~~~~~~~~l~~~l~~------~~~l~~~~g-gH~~~--~e~p~~v~~ 312 (405)
......+..++ +|+|+++|++|..+++..++++++.+.. .++++++++ ||... .+++.+...
T Consensus 593 -------~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 665 (695)
T 2bkl_A 593 -------YSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSV 665 (695)
T ss_dssp -------HCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHH
T ss_pred -------cChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHH
Confidence 01112233333 6999999999999999999999988732 478999998 99874 345677888
Q ss_pred HHHHHHHhhcCC
Q 015550 313 ALIDLIKASEKK 324 (405)
Q Consensus 313 ~i~~fl~~~~~~ 324 (405)
.+.+||.+....
T Consensus 666 ~~~~fl~~~l~~ 677 (695)
T 2bkl_A 666 DLYSFLFQVLDV 677 (695)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 899999887643
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.9e-17 Score=168.47 Aligned_cols=225 Identities=10% Similarity=0.049 Sum_probs=136.7
Q ss_pred ccCCEEEEEEEccC-----CCCeEEEEecCCCCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 21 NDNGIKIFYRTYGR-----GPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 21 ~~~g~~i~y~~~G~-----~~p~vvllHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
..+|.+|.+....+ ..|+||++||.++... .|......|.+ +||.|+++|+
T Consensus 468 ~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~ 525 (741)
T 1yr2_A 468 SKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWID----------------------SGGAFALANL 525 (741)
T ss_dssp CTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHT----------------------TTCEEEEECC
T ss_pred cCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHH----------------------CCcEEEEEec
Confidence 45788888766532 3478999999887654 46666666766 4999999999
Q ss_pred CCCCCCCCC---CCCC---CCCHHHHHHHHHHHHHH--hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 94 RGMGRSSVP---VKKT---EYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 94 ~G~G~S~~~---~~~~---~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
||+|.+... .... ...++++++.+..+++. .+.++++++|||+||.+++.++.++|++++++|+..+.....
T Consensus 526 rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~ 605 (741)
T 1yr2_A 526 RGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDML 605 (741)
T ss_dssp TTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTT
T ss_pred CCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccc
Confidence 999987321 1000 11233444444444433 134689999999999999999999999999999998763111
Q ss_pred CCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhh
Q 015550 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (405)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
. ... . . ....+...+ ..... ...++.+..
T Consensus 606 ~-~~~---------------~--------~----~~~~~~~~~-g~~~~-~~~~~~~~~--------------------- 634 (741)
T 1yr2_A 606 R-FDQ---------------F--------T----AGRYWVDDY-GYPEK-EADWRVLRR--------------------- 634 (741)
T ss_dssp S-GGG---------------S--------T----TGGGGHHHH-CCTTS-HHHHHHHHT---------------------
T ss_pred c-ccC---------------C--------C----CCchhHHHc-CCCCC-HHHHHHHHH---------------------
Confidence 0 000 0 0 000001111 11100 000111000
Q ss_pred hcccChhhhhhhhh-cCC-cEEEEeecCCccCCHHHHHHHHHHhCC------CeEEEEcCC-Ccccccc--CHHHHHHHH
Q 015550 246 MHKMTQKDIQTIRS-AGF-LVSVIHGRHDVIAQICYARRLAEKLYP------VARMIDLPG-GHLVSHE--RTEEVNQAL 314 (405)
Q Consensus 246 ~~~~~~~~~~~l~~-i~~-Pvlvi~G~~D~~~~~~~~~~l~~~l~~------~~~l~~~~g-gH~~~~e--~p~~v~~~i 314 (405)
......+.. +++ |+|+++|++|..+++..+.++++.+.. .++++++++ ||..... +..++.+.+
T Consensus 635 -----~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~ 709 (741)
T 1yr2_A 635 -----YSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADV 709 (741)
T ss_dssp -----TCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHH
T ss_pred -----cCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHH
Confidence 011223444 665 999999999999999999999887722 378999998 9987654 345888999
Q ss_pred HHHHHhhcC
Q 015550 315 IDLIKASEK 323 (405)
Q Consensus 315 ~~fl~~~~~ 323 (405)
.+||.+...
T Consensus 710 ~~fl~~~l~ 718 (741)
T 1yr2_A 710 QAFLAHFTG 718 (741)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999988764
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-17 Score=153.32 Aligned_cols=225 Identities=17% Similarity=0.154 Sum_probs=133.6
Q ss_pred cCCEEEEEEEccC---CCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 22 DNGIKIFYRTYGR---GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 22 ~~g~~i~y~~~G~---~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.+|..|..+.+.+ ..|+||++||.+ ++...|..++..|+.. .||.|+++|+|+
T Consensus 68 ~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~---------------------~g~~vv~~dyr~ 126 (317)
T 3qh4_A 68 EAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARR---------------------ARCAVVSVDYRL 126 (317)
T ss_dssp TTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HTSEEEEECCCC
T ss_pred CCCCeEEEEEEecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHHH---------------------cCCEEEEecCCC
Confidence 3555666555543 346899999987 6777888888888741 399999999998
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHH---HhCC--ccEEEEEEChhHHHHHHHHHhCCcc----cceEEEeccCCCCCC
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMD---HLGW--KQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGFQ 166 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~---~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~ 166 (405)
.+....+. ..++..+.+..+.+ .+++ ++++|+|||+||.+|+.+|.+++++ +.+++++++.....
T Consensus 127 ~p~~~~p~-----~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~- 200 (317)
T 3qh4_A 127 APEHPYPA-----ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR- 200 (317)
T ss_dssp TTTSCTTH-----HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-
T ss_pred CCCCCCch-----HHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-
Confidence 76543221 23333333322222 3454 4899999999999999999987764 99999999874211
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
.... ... . ........... ......|..... ....
T Consensus 201 -----~~~~---~~~-~-----------~~~~~~~~~~~----------~~~~~~~~~~~~----~~~~----------- 235 (317)
T 3qh4_A 201 -----PTAS---RSE-F-----------RATPAFDGEAA----------SLMWRHYLAGQT----PSPE----------- 235 (317)
T ss_dssp -----CCHH---HHH-T-----------TTCSSSCHHHH----------HHHHHHHHTTCC----CCTT-----------
T ss_pred -----CCcC---HHH-h-----------cCCCCcCHHHH----------HHHHHHhcCCCC----CCcc-----------
Confidence 0000 000 0 00000011000 011111111100 0000
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCC--HHHHHHHHHHhCCCeEEEEcCC-Cccc-----cccCHHHHHHHHHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ--ICYARRLAEKLYPVARMIDLPG-GHLV-----SHERTEEVNQALIDLI 318 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~--~~~~~~l~~~l~~~~~l~~~~g-gH~~-----~~e~p~~v~~~i~~fl 318 (405)
........+.. -.|+++++|++|.+++ ...++++.+. ..++++++++| +|.+ ..+.++++.+.+.+||
T Consensus 236 --~~p~~~~~l~~-lpP~li~~G~~D~~~~~~~~~a~~l~~~-g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l 311 (317)
T 3qh4_A 236 --SVPGRRGQLAG-LPATLITCGEIDPFRDEVLDYAQRLLGA-GVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHAL 311 (317)
T ss_dssp --TCGGGCSCCTT-CCCEEEEEEEESTTHHHHHHHHHHHHHT-TCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHH
T ss_pred --cCCCcccccCC-CCceeEEecCcCCCchhHHHHHHHHHHc-CCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHH
Confidence 00000011111 1499999999999987 4455555553 47899999999 9974 3466789999999999
Q ss_pred Hhhc
Q 015550 319 KASE 322 (405)
Q Consensus 319 ~~~~ 322 (405)
++..
T Consensus 312 ~~~l 315 (317)
T 3qh4_A 312 ADAF 315 (317)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8753
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-17 Score=151.78 Aligned_cols=178 Identities=19% Similarity=0.195 Sum_probs=122.6
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC------CCCCCCCCC-----C
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR------GMGRSSVPV-----K 104 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~------G~G~S~~~~-----~ 104 (405)
.|.|||+||+|++...|..+.+.|...+ .++.+++++-| |.|.+..+. .
T Consensus 66 ~plVI~LHG~G~~~~~~~~~~~~l~~~~--------------------~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~ 125 (285)
T 4fhz_A 66 TSLVVFLHGYGADGADLLGLAEPLAPHL--------------------PGTAFVAPDAPEPCRANGFGFQWFPIPWLDGS 125 (285)
T ss_dssp SEEEEEECCTTBCHHHHHTTHHHHGGGS--------------------TTEEEEEECCSEECTTSSSCEESSCCHHHHCC
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHHhC--------------------CCeEEEecCCCcccccCCCcccccccccccCc
Confidence 3579999999999998988888886522 27888888754 444331110 0
Q ss_pred CCCC---CHHHHHHHHHHHHHH----hCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 105 KTEY---TTKIMAKDVIALMDH----LGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 105 ~~~~---~~~~~~~dl~~~l~~----l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
.... .+...++++.++++. .++ ++++++|+|+||.+|+.++.++|+++.++|.+++... .
T Consensus 126 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~------~----- 194 (285)
T 4fhz_A 126 SETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLL------A----- 194 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCS------C-----
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCcc------C-----
Confidence 0000 122234455555543 344 5899999999999999999999999999999886410 0
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhh
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (405)
.+ . ..
T Consensus 195 --------------------------~~-----------------~--------------------------------~~ 199 (285)
T 4fhz_A 195 --------------------------PE-----------------R--------------------------------LA 199 (285)
T ss_dssp --------------------------HH-----------------H--------------------------------HH
T ss_pred --------------------------ch-----------------h--------------------------------hh
Confidence 00 0 00
Q ss_pred hhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 256 ~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
.....++|++++||++|.++|.+.++++.+.+ ..+.++++++| ||.+. +++ .+.+.+||++...
T Consensus 200 ~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~-l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 200 EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDG-LSVALAFLKERLP 267 (285)
T ss_dssp HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHH-HHHHHHHHHHHCC
T ss_pred hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHH-HHHHHHHHHHHCc
Confidence 01123579999999999999999988888766 45688999999 99763 334 4567889988653
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.73 E-value=8.6e-17 Score=154.25 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=75.9
Q ss_pred CeEEEEecCCCCCCc-----------hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 37 TKVILITGLAGTHDA-----------WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 37 p~vvllHG~~~~~~~-----------~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
|+||++||++++... |..++..|.. +||.|+++|+||||.|......
T Consensus 80 P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~G~~V~~~D~~G~G~s~~~~~~ 137 (397)
T 3h2g_A 80 PLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLAS----------------------QGYVVVGSDYLGLGKSNYAYHP 137 (397)
T ss_dssp EEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGG----------------------GTCEEEEECCTTSTTCCCSSCC
T ss_pred cEEEEeCCCcCCCCcccccccccccchHHHHHHHHH----------------------CCCEEEEecCCCCCCCCCCccc
Confidence 678889999988765 6667777766 5999999999999999644321
Q ss_pred CC------CCHHHHHHHHHHHHHHhCC---ccEEEEEEChhHHHHHHHHH-hCCc-----ccceEEEeccC
Q 015550 106 TE------YTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAA-MVPE-----RVLSLALLNVT 161 (405)
Q Consensus 106 ~~------~~~~~~~~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~-~~p~-----~v~~lvl~~~~ 161 (405)
.. .++.+.++++..+++++++ ++++++||||||.+++.+|. ..++ .+.+++..+++
T Consensus 138 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 208 (397)
T 3h2g_A 138 YLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGP 208 (397)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCC
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccc
Confidence 11 2455667777888888877 68999999999999998873 3332 45555555443
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-16 Score=142.20 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=83.3
Q ss_pred CCeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 36 PTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
.|+||++||++++...|.. .+..+... .|+.|+++|.++.+.+..+.. ....+.+
T Consensus 41 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~~~~~~--~~~~~~~ 97 (263)
T 2uz0_A 41 IPVLYLLHGMSGNHNSWLKRTNVERLLRG---------------------TNLIVVMPNTSNGWYTDTQYG--FDYYTAL 97 (263)
T ss_dssp BCEEEEECCTTCCTTHHHHHSCHHHHTTT---------------------CCCEEEECCCTTSTTSBCTTS--CBHHHHH
T ss_pred CCEEEEECCCCCCHHHHHhccCHHHHHhc---------------------CCeEEEEECCCCCccccCCCc--ccHHHHH
Confidence 3689999999999999887 56665542 389999999998887764432 2235677
Q ss_pred HHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 114 AKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
++|+..+++.. +.++++++|||+||.+|+.+|. +|++++++|++++..
T Consensus 98 ~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~ 151 (263)
T 2uz0_A 98 AEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGAL 151 (263)
T ss_dssp HTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCC
T ss_pred HHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCc
Confidence 88998888875 2368999999999999999999 999999999999874
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=147.11 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=83.4
Q ss_pred ccCCEEEEEEEc---c--CCCCeEEEEecCCCCCCch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 21 NDNGIKIFYRTY---G--RGPTKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 21 ~~~g~~i~y~~~---G--~~~p~vvllHG~~~~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..+|..+.+..+ + +..|+||++||++++...| ..+.+.+.+ .||.|+++|+|
T Consensus 34 ~~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~d~~ 91 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADR----------------------HKLLIVAPTFS 91 (304)
T ss_dssp -CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHHH----------------------HTCEEEEEECC
T ss_pred CCCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHH----------------------CCcEEEEeCCc
Confidence 345666665433 2 2357899999999998877 666777765 49999999999
Q ss_pred ------------CC--CCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCc-ccceEEE
Q 015550 95 ------------GM--GRSSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLAL 157 (405)
Q Consensus 95 ------------G~--G~S~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl 157 (405)
|+ |.|..+.......++++.+.+..+.+.. +.++++|+||||||.+++.++..+|+ +++++|+
T Consensus 92 ~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl 171 (304)
T 3d0k_A 92 DEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTA 171 (304)
T ss_dssp TTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEE
T ss_pred cccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEE
Confidence 66 7665432211233444333333333332 35789999999999999999999995 7999998
Q ss_pred eccC
Q 015550 158 LNVT 161 (405)
Q Consensus 158 ~~~~ 161 (405)
.+++
T Consensus 172 ~~~~ 175 (304)
T 3d0k_A 172 ANPG 175 (304)
T ss_dssp ESCS
T ss_pred ecCc
Confidence 8754
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-16 Score=150.16 Aligned_cols=199 Identities=16% Similarity=0.100 Sum_probs=130.0
Q ss_pred CCEEEEEEEccCC-------CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 23 NGIKIFYRTYGRG-------PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 23 ~g~~i~y~~~G~~-------~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+|..+.|..+-+. .|+||++||++++...+.. ..+...... .. .........++.|+++|.+|
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~--~~~~~~g~~-----~~---~~~~~~~~~~~~vv~pd~~g 223 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYL--QVAGNRGAV-----VW---AQPRYQVVHPCFVLAPQCPP 223 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSH--HHHSSTTTT-----GG---GSHHHHTTSCCEEEEECCCT
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhh--hhhccccce-----ee---cCccccccCCEEEEEecCCC
Confidence 7888988877542 2689999999876544321 111110000 00 00001112478999999998
Q ss_pred CCCCCCCCC------CCCCCHHHHHHHHHHHHHHhCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 96 MGRSSVPVK------KTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 96 ~G~S~~~~~------~~~~~~~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
.+....... ......++..+.+..+++..+.+ +++++||||||.+++.++.++|++++++|++++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~----- 298 (380)
T 3doh_A 224 NSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGG----- 298 (380)
T ss_dssp TCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC-----
T ss_pred CCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCC-----
Confidence 664422110 01234556666677777777654 79999999999999999999999999999999762
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
T Consensus 299 -------------------------------------------------------------------------------- 298 (380)
T 3doh_A 299 -------------------------------------------------------------------------------- 298 (380)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccChhhhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCCC-cccc----ccCHHHHHH--HHHH
Q 015550 248 KMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGG-HLVS----HERTEEVNQ--ALID 316 (405)
Q Consensus 248 ~~~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~gg-H~~~----~e~p~~v~~--~i~~ 316 (405)
....+..+ ++|+|+++|++|.++|++.++.+.+.+ ..+.++++++++ |..+ +........ .+.+
T Consensus 299 -----~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~ 373 (380)
T 3doh_A 299 -----DVSKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPTYENQEAIE 373 (380)
T ss_dssp -----CGGGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHHHTCHHHHH
T ss_pred -----ChhhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHhcCCHHHHH
Confidence 00011222 389999999999999999998888877 245889999974 2221 223344444 7888
Q ss_pred HHHhh
Q 015550 317 LIKAS 321 (405)
Q Consensus 317 fl~~~ 321 (405)
||.+.
T Consensus 374 wL~~~ 378 (380)
T 3doh_A 374 WLFEQ 378 (380)
T ss_dssp HHHTC
T ss_pred HHHhh
Confidence 88764
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-16 Score=163.56 Aligned_cols=226 Identities=12% Similarity=0.084 Sum_probs=139.1
Q ss_pred ccCCEEEEEEEccC-------CCCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTYGR-------GPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~G~-------~~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..+|.+|.+....+ ..|+||++||.++.... |......|... +||.|+++
T Consensus 444 ~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~---------------------~G~~v~~~ 502 (710)
T 2xdw_A 444 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRH---------------------MGGVLAVA 502 (710)
T ss_dssp CTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHH---------------------HCCEEEEE
T ss_pred cCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHh---------------------CCcEEEEE
Confidence 45788887755421 34789999998766543 44444444320 19999999
Q ss_pred cCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 92 DNRGMGRSSVPVK--KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 92 D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
|+||+|.+..... ..........+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|+.++...
T Consensus 503 d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d 582 (710)
T 2xdw_A 503 NIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 582 (710)
T ss_dssp CCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred ccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCccc
Confidence 9999997632100 00111122334444444443 346899999999999999999999999999999987632
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
..... . .. ....+...+ ..... ......+.. .
T Consensus 583 ~~~~~---------------~-~~------------~~~~~~~~~-g~~~~-~~~~~~~~~-~----------------- 614 (710)
T 2xdw_A 583 MLKFH---------------K-YT------------IGHAWTTDY-GCSDS-KQHFEWLIK-Y----------------- 614 (710)
T ss_dssp TTTGG---------------G-ST------------TGGGGHHHH-CCTTS-HHHHHHHHH-H-----------------
T ss_pred Hhhcc---------------c-cC------------CChhHHHhC-CCCCC-HHHHHHHHH-h-----------------
Confidence 11000 0 00 000011111 11100 000111100 0
Q ss_pred hhhcccChhhhhhhh-----hcCC-cEEEEeecCCccCCHHHHHHHHHHhC----------CCeEEEEcCC-Ccccccc-
Q 015550 244 CWMHKMTQKDIQTIR-----SAGF-LVSVIHGRHDVIAQICYARRLAEKLY----------PVARMIDLPG-GHLVSHE- 305 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~-----~i~~-Pvlvi~G~~D~~~~~~~~~~l~~~l~----------~~~~l~~~~g-gH~~~~e- 305 (405)
.....+. .+++ |+|+++|++|..+++..+.++++.+. ..++++++++ ||.....
T Consensus 615 --------sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 686 (710)
T 2xdw_A 615 --------SPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPT 686 (710)
T ss_dssp --------CGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCH
T ss_pred --------CcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCH
Confidence 1112233 5676 99999999999999999988887762 2358889998 9988663
Q ss_pred -CHHHHHHHHHHHHHhhcC
Q 015550 306 -RTEEVNQALIDLIKASEK 323 (405)
Q Consensus 306 -~p~~v~~~i~~fl~~~~~ 323 (405)
++.++...+.+||.+...
T Consensus 687 ~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 687 AKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 456888899999987653
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-15 Score=143.45 Aligned_cols=66 Identities=12% Similarity=-0.003 Sum_probs=50.8
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHhCC-C-eEEEEcCCCccccccCHHHHHHHHHHHHHhhcCC
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYP-V-ARMIDLPGGHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~-~-~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
.+++|++++||++|.++|++.++++++.+.. + ++++.++++|.-|..........+.+||++....
T Consensus 305 ~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~~~~~~~H~~~~~~~~~~~~~wl~~~~~~ 372 (377)
T 4ezi_A 305 KPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKSVSDALDHVQAHPFVLKEQVDFFKQFERQ 372 (377)
T ss_dssp CCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEESCSSCCTTTTHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEcCCCCCCccChHHHHHHHHHHHHHHhhcc
Confidence 5689999999999999999999999987721 1 7888888744333344456777888888887654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-16 Score=143.74 Aligned_cols=119 Identities=18% Similarity=0.228 Sum_probs=83.2
Q ss_pred cCCEEEEEEEccC------CCCeEEEEecCCCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 22 DNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 22 ~~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
..|..+.+..+-+ ..|+||++||++++...|... ...+.. .||.|+++|
T Consensus 25 ~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~d 82 (282)
T 3fcx_A 25 ELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASE----------------------HGLVVIAPD 82 (282)
T ss_dssp TTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHH----------------------HTCEEEEEC
T ss_pred hcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcchHHHHhhc----------------------CCeEEEEec
Confidence 3566666655532 236899999999998888665 455555 499999999
Q ss_pred C--CCCCCCCCCC-------------CC-CC-----CCHHHHHHHHHHHHH-HhCC--ccEEEEEEChhHHHHHHHHHhC
Q 015550 93 N--RGMGRSSVPV-------------KK-TE-----YTTKIMAKDVIALMD-HLGW--KQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 93 ~--~G~G~S~~~~-------------~~-~~-----~~~~~~~~dl~~~l~-~l~~--~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
. ||+|.+.... .. .. ......++++..+++ .+++ ++++++||||||.+|+.+|.++
T Consensus 83 ~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 162 (282)
T 3fcx_A 83 TSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKN 162 (282)
T ss_dssp SCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTS
T ss_pred cccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhC
Confidence 9 7766543210 00 00 012334556777766 4444 6899999999999999999999
Q ss_pred CcccceEEEeccCC
Q 015550 149 PERVLSLALLNVTG 162 (405)
Q Consensus 149 p~~v~~lvl~~~~~ 162 (405)
|++++++|++++..
T Consensus 163 p~~~~~~v~~s~~~ 176 (282)
T 3fcx_A 163 PGKYKSVSAFAPIC 176 (282)
T ss_dssp TTTSSCEEEESCCC
T ss_pred cccceEEEEeCCcc
Confidence 99999999999763
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.2e-16 Score=140.58 Aligned_cols=119 Identities=18% Similarity=0.228 Sum_probs=85.1
Q ss_pred cCCEEEEEEEccC-------CCCeEEEEecCCCCCCchhh---hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 22 DNGIKIFYRTYGR-------GPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 22 ~~g~~i~y~~~G~-------~~p~vvllHG~~~~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..|..+.+..+-+ ..|+||++||++++...|.. +...+.. .|+.|+++
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~ 81 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAE----------------------LGIAIVAP 81 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHH----------------------HTCEEEEC
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhh----------------------CCeEEEEe
Confidence 4577777766643 23689999999998887765 3334443 39999999
Q ss_pred cCCCCCCCCCCCCC-------------------CCCC-HHHHHHHHHHHHHHh-CC-ccEEEEEEChhHHHHHHHHHhCC
Q 015550 92 DNRGMGRSSVPVKK-------------------TEYT-TKIMAKDVIALMDHL-GW-KQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 92 D~~G~G~S~~~~~~-------------------~~~~-~~~~~~dl~~~l~~l-~~-~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
|.+++|.+...... .... .+.+.+++..+++.. .. ++++++||||||.+|+.+|.++|
T Consensus 82 d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p 161 (280)
T 3ls2_A 82 DTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNP 161 (280)
T ss_dssp CSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHST
T ss_pred CCcccccccccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCc
Confidence 99877765322100 0112 334456777777654 22 68999999999999999999999
Q ss_pred cccceEEEeccCC
Q 015550 150 ERVLSLALLNVTG 162 (405)
Q Consensus 150 ~~v~~lvl~~~~~ 162 (405)
+++++++++++..
T Consensus 162 ~~~~~~~~~s~~~ 174 (280)
T 3ls2_A 162 QDYVSASAFSPIV 174 (280)
T ss_dssp TTCSCEEEESCCS
T ss_pred hhheEEEEecCcc
Confidence 9999999999863
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.6e-17 Score=154.82 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=79.0
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC-----------
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV----------- 103 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~----------- 103 (405)
..|+|||+||++++...|..++..|+. +||.|+++|+||+|.|....
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~----------------------~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~ 154 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLAS----------------------HGFIVAAVEHRDRSASATYYFKDQSAAEIGD 154 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHH----------------------TTCEEEEECCCSSCSSEEEECSSHHHHHHTC
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHh----------------------CceEEEEeccCCCCccceeecCCccccccCC
Confidence 346799999999999999999999987 49999999999999874210
Q ss_pred ----------CCCC-----CCHHHHHHHHHHHHHHh--------------------------CCccEEEEEEChhHHHHH
Q 015550 104 ----------KKTE-----YTTKIMAKDVIALMDHL--------------------------GWKQAHVFGHSMGAMIAC 142 (405)
Q Consensus 104 ----------~~~~-----~~~~~~~~dl~~~l~~l--------------------------~~~~v~lvGhS~Gg~ia~ 142 (405)
.... ..++..++|+..+++.+ +.+++.++||||||.+++
T Consensus 155 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~ 234 (383)
T 3d59_A 155 KSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVI 234 (383)
T ss_dssp CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHH
T ss_pred ceeeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHH
Confidence 0000 01223356666666543 235899999999999999
Q ss_pred HHHHhCCcccceEEEeccC
Q 015550 143 KLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 143 ~~a~~~p~~v~~lvl~~~~ 161 (405)
.++...| +|+++|++++.
T Consensus 235 ~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 235 QTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp HHHHHCT-TCCEEEEESCC
T ss_pred HHHhhCC-CccEEEEeCCc
Confidence 9988765 69999999865
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.71 E-value=7.2e-16 Score=158.79 Aligned_cols=216 Identities=12% Similarity=0.060 Sum_probs=125.5
Q ss_pred CCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--------------------ccEEEEEEChhHHHH
Q 015550 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--------------------KQAHVFGHSMGAMIA 141 (405)
Q Consensus 82 ~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~--------------------~~v~lvGhS~Gg~ia 141 (405)
+++||.|+++|.||+|.|+.... .++. +.++|+.++++.+.. .+|.++||||||.++
T Consensus 278 a~~GYaVv~~D~RG~G~S~G~~~--~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ia 354 (763)
T 1lns_A 278 LTRGFASIYVAGVGTRSSDGFQT--SGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMA 354 (763)
T ss_dssp HTTTCEEEEECCTTSTTSCSCCC--TTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHH
T ss_pred HHCCCEEEEECCCcCCCCCCcCC--CCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHH
Confidence 34699999999999999986543 3343 567899999998761 489999999999999
Q ss_pred HHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHH-HhhhCCCc------h
Q 015550 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL-EEYVGSST------R 214 (405)
Q Consensus 142 ~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~ 214 (405)
+.+|..+|++++++|..++... ... ........ ......... ....+ ........ .
T Consensus 355 l~~Aa~~p~~lkaiV~~~~~~d---------~~~------~~~~~g~~-~~~~g~~~~-~~~~l~~~~~~~~~~~g~~~~ 417 (763)
T 1lns_A 355 YGAATTGVEGLELILAEAGISS---------WYN------YYRENGLV-RSPGGFPGE-DLDVLAALTYSRNLDGADFLK 417 (763)
T ss_dssp HHHHTTTCTTEEEEEEESCCSB---------HHH------HHBSSSSB-CCCTTCTTC-CHHHHHHHHCGGGGSHHHHHH
T ss_pred HHHHHhCCcccEEEEEeccccc---------HHH------Hhhhcchh-hhcccCCch-hhhHHhHHHHhhhcCcchhhh
Confidence 9999999999999999987631 000 00000000 000000000 00000 00000000 0
Q ss_pred hHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCC--CeE
Q 015550 215 RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP--VAR 292 (405)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~--~~~ 292 (405)
....+..+...+.......... ...+|.. .+....+.++++|+|+|+|.+|..+++..+.++++.+.. ..+
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~----~~~~w~~---~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~ 490 (763)
T 1lns_A 418 GNAEYEKRLAEMTAALDRKSGD----YNQFWHD---RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKH 490 (763)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCC----CCHHHHT---TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEE
T ss_pred HHHHHHHHHHHHHhhhhhccCc----hhHHhhc---cChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeE
Confidence 0001111111110000000000 0111211 123456788999999999999999999999999998832 355
Q ss_pred EEEcCCCcccccc-CHHHHHHHHHHHHHhhcCC
Q 015550 293 MIDLPGGHLVSHE-RTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 293 l~~~~ggH~~~~e-~p~~v~~~i~~fl~~~~~~ 324 (405)
+++.++||..+.+ .+.++.+.+.+|++.....
T Consensus 491 l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg 523 (763)
T 1lns_A 491 AFLHRGAHIYMNSWQSIDFSETINAYFVAKLLD 523 (763)
T ss_dssp EEEESCSSCCCTTBSSCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCcccCccccchHHHHHHHHHHHHHHhcC
Confidence 6655669987655 4556677777777766543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.5e-16 Score=159.31 Aligned_cols=227 Identities=11% Similarity=0.059 Sum_probs=136.6
Q ss_pred ccCCEEEEEEEcc-------CCCCeEEEEecCCCCC--CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTYG-------RGPTKVILITGLAGTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~G-------~~~p~vvllHG~~~~~--~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..+|.+|.+...- ...|+||++||..+.. ..|......|.+ +||.|+++
T Consensus 432 ~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~ 489 (693)
T 3iuj_A 432 SKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLD----------------------LGGVYAVA 489 (693)
T ss_dssp CTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHH----------------------TTCEEEEE
T ss_pred cCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHH----------------------CCCEEEEE
Confidence 4577777765442 1347899999976644 346666666665 49999999
Q ss_pred cCCCCCCCCCCC---CC---CCCCHHHHHHHHHHHHHH--hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 92 DNRGMGRSSVPV---KK---TEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 92 D~~G~G~S~~~~---~~---~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
|+||.|...... .. ....++++++.+..+++. ...++++++|||+||+++..++.++|++++++|+..+...
T Consensus 490 d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d 569 (693)
T 3iuj_A 490 NLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLD 569 (693)
T ss_dssp CCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCC
T ss_pred eCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcch
Confidence 999998763211 00 011233344333333333 1236899999999999999999999999999999887632
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
.... .. .... ..+... ++........+..+ ..
T Consensus 570 ~~~~---------------~~---------~~~~----~~~~~~-~g~p~~~~~~~~~~-~~------------------ 601 (693)
T 3iuj_A 570 MLRY---------------HT---------FTAG----TGWAYD-YGTSADSEAMFDYL-KG------------------ 601 (693)
T ss_dssp TTTG---------------GG---------SGGG----GGCHHH-HCCTTSCHHHHHHH-HH------------------
T ss_pred hhhh---------------cc---------CCCc----hhHHHH-cCCccCHHHHHHHH-Hh------------------
Confidence 1100 00 0000 000001 11111111000000 00
Q ss_pred hhhcccChhhhhhhhh-cCCc-EEEEeecCCccCCHHHHHHHHHHhC------CCeEEEEcCC-Cccccc--cCHHHHHH
Q 015550 244 CWMHKMTQKDIQTIRS-AGFL-VSVIHGRHDVIAQICYARRLAEKLY------PVARMIDLPG-GHLVSH--ERTEEVNQ 312 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~-i~~P-vlvi~G~~D~~~~~~~~~~l~~~l~------~~~~l~~~~g-gH~~~~--e~p~~v~~ 312 (405)
......+.. +++| +|+++|++|..+|+..+.++++++. ..++++++++ ||.... ++..+...
T Consensus 602 -------~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 674 (693)
T 3iuj_A 602 -------YSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSA 674 (693)
T ss_dssp -------HCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHH
T ss_pred -------cCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHH
Confidence 112234455 7787 9999999999999999998888772 2468888988 998765 45678888
Q ss_pred HHHHHHHhhcCC
Q 015550 313 ALIDLIKASEKK 324 (405)
Q Consensus 313 ~i~~fl~~~~~~ 324 (405)
.+.+||.+....
T Consensus 675 ~~~~fl~~~l~~ 686 (693)
T 3iuj_A 675 DIYAFTLYEMGY 686 (693)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 899999887643
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.7e-16 Score=161.01 Aligned_cols=228 Identities=16% Similarity=0.102 Sum_probs=139.8
Q ss_pred ccCCEEEEEEEc---c----CCCCeEEEEecCCCCCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTY---G----RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~---G----~~~p~vvllHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
..+|.+|.+... + ...|+||++||..+... .|......|.+ +||.|+++
T Consensus 487 s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~----------------------~G~~v~~~ 544 (751)
T 2xe4_A 487 APDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCD----------------------RGMIFAIA 544 (751)
T ss_dssp CTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHT----------------------TTCEEEEE
T ss_pred CCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHh----------------------CCcEEEEE
Confidence 457877765432 2 13478999999877654 57667777776 49999999
Q ss_pred cCCCCCCCCCC----CCC---CCCCHHHHHHHHHHHHHH--hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 92 DNRGMGRSSVP----VKK---TEYTTKIMAKDVIALMDH--LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 92 D~~G~G~S~~~----~~~---~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
|+||+|.+... ... ...+++++++.+..+++. .+.++++++|+|+||.+++.++.++|++++++|+.++..
T Consensus 545 d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~ 624 (751)
T 2xe4_A 545 HIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFV 624 (751)
T ss_dssp CCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred eeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcc
Confidence 99999976321 110 112345555555555554 234689999999999999999999999999999998752
Q ss_pred CCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhH
Q 015550 163 GGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIH 242 (405)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
+.... ......+... ..+ .. +... .....+..+. .
T Consensus 625 ---------d~~~~-----~~~~~~~~~~----------~~~-~~-~g~p-~~~~~~~~~~-~----------------- 659 (751)
T 2xe4_A 625 ---------DVMTT-----MCDPSIPLTT----------GEW-EE-WGNP-NEYKYYDYML-S----------------- 659 (751)
T ss_dssp ---------CHHHH-----HTCTTSTTHH----------HHT-TT-TCCT-TSHHHHHHHH-H-----------------
T ss_pred ---------hHHhh-----hcccCcccch----------hhH-HH-cCCC-CCHHHHHHHH-h-----------------
Confidence 11000 0000000000 000 00 0111 0000000000 0
Q ss_pred HhhhcccChhhhhhhhhcCCc-EEEEeecCCccCCHHHHHHHHHHhCC------CeEEEEcCC-CccccccCHH--HHHH
Q 015550 243 ACWMHKMTQKDIQTIRSAGFL-VSVIHGRHDVIAQICYARRLAEKLYP------VARMIDLPG-GHLVSHERTE--EVNQ 312 (405)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~P-vlvi~G~~D~~~~~~~~~~l~~~l~~------~~~l~~~~g-gH~~~~e~p~--~v~~ 312 (405)
......+..+++| +|+++|++|..+|+..+.++++.+.. ...+.++++ ||....++++ +...
T Consensus 660 --------~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 731 (751)
T 2xe4_A 660 --------YSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESA 731 (751)
T ss_dssp --------HCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHH
T ss_pred --------cChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHH
Confidence 0112334567787 99999999999999999998887721 123444587 9998765444 4456
Q ss_pred HHHHHHHhhcC
Q 015550 313 ALIDLIKASEK 323 (405)
Q Consensus 313 ~i~~fl~~~~~ 323 (405)
.+.+||.+...
T Consensus 732 ~~~~Fl~~~l~ 742 (751)
T 2xe4_A 732 IQQAFVCKHLK 742 (751)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 78899988764
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.5e-17 Score=149.57 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=86.0
Q ss_pred CCCeEEEEecCCCCC-Cchh-hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTH-DAWG-PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~-~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.+++|||+||++++. ..|. .+.+.|.+ +||+|+++|+||||.++. ..+.++
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~----------------------~Gy~V~a~DlpG~G~~~~-----~~~~~~ 116 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQ----------------------LGYTPCWISPPPFMLNDT-----QVNTEY 116 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHH----------------------TTCEEEEECCTTTTCSCH-----HHHHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHH----------------------CCCeEEEecCCCCCCCcH-----HHHHHH
Confidence 345799999999998 7898 89999987 499999999999997642 234566
Q ss_pred HHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC---CcccceEEEeccCCCC
Q 015550 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGG 164 (405)
Q Consensus 113 ~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~ 164 (405)
+++.+..+++..+.++++|+||||||+++..++..+ +++|+++|+++++..+
T Consensus 117 la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 117 MVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 171 (316)
T ss_dssp HHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred HHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCC
Confidence 777788888888989999999999999998777765 5899999999987543
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-17 Score=129.99 Aligned_cols=99 Identities=20% Similarity=0.338 Sum_probs=86.1
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
++++.+|.+++|...|++ |+|||+| ++...|..+ |.+ +|+|+++|+||||
T Consensus 5 ~~~~~~g~~~~~~~~g~~-~~vv~~H---~~~~~~~~~---l~~-----------------------~~~v~~~d~~G~G 54 (131)
T 2dst_A 5 GYLHLYGLNLVFDRVGKG-PPVLLVA---EEASRWPEA---LPE-----------------------GYAFYLLDLPGYG 54 (131)
T ss_dssp EEEEETTEEEEEEEECCS-SEEEEES---SSGGGCCSC---CCT-----------------------TSEEEEECCTTST
T ss_pred EEEEECCEEEEEEEcCCC-CeEEEEc---CCHHHHHHH---HhC-----------------------CcEEEEECCCCCC
Confidence 456789999999999975 5699999 566677766 655 7999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
.|..+.. . .+++++++.++++.++.++++++||||||.+++.+|.++|.
T Consensus 55 ~s~~~~~--~--~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 55 RTEGPRM--A--PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp TCCCCCC--C--HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CCCCCCC--C--HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 9987654 2 99999999999999999999999999999999999999884
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=7e-16 Score=137.67 Aligned_cols=191 Identities=17% Similarity=0.135 Sum_probs=124.9
Q ss_pred EEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC-----
Q 015550 25 IKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----- 96 (405)
Q Consensus 25 ~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~----- 96 (405)
..+.|+...+ .+++|||+||+|++...|.++.+.|...+ .++.+++++-|-.
T Consensus 23 ~~l~y~ii~P~~~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~--------------------~~~~~i~P~Ap~~~~~~~ 82 (246)
T 4f21_A 23 NAMNYELMEPAKQARFCVIWLHGLGADGHDFVDIVNYFDVSL--------------------DEIRFIFPHADIIPVTIN 82 (246)
T ss_dssp CCCCEEEECCSSCCCEEEEEEEC--CCCCCGGGGGGGCCSCC--------------------TTEEEEEECGGGSCTTTH
T ss_pred CCcCceEeCCCCcCCeEEEEEcCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEeCCCCccccccC
Confidence 3455655544 34589999999999999999888886522 2788888875421
Q ss_pred ---------CCCCCCCC-----CCCCCHHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEE
Q 015550 97 ---------GRSSVPVK-----KTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLAL 157 (405)
Q Consensus 97 ---------G~S~~~~~-----~~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 157 (405)
........ ...-.+...++.+..+++.. ..++++++|+|+||++++.++.++|+++.++|.
T Consensus 83 ~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~ 162 (246)
T 4f21_A 83 MGMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMA 162 (246)
T ss_dssp HHHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEE
T ss_pred CCCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCcccccccee
Confidence 11110000 00112344455555555432 346899999999999999999999999999999
Q ss_pred eccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccc
Q 015550 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (405)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (405)
+++..+ ... .+...
T Consensus 163 ~sG~lp------~~~------------------------------------------------~~~~~------------ 176 (246)
T 4f21_A 163 LSTYLP------AWD------------------------------------------------NFKGK------------ 176 (246)
T ss_dssp ESCCCT------THH------------------------------------------------HHSTT------------
T ss_pred hhhccC------ccc------------------------------------------------ccccc------------
Confidence 987520 000 00000
Q ss_pred hhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
. .-...++||+++||++|.++|.+.++++.+.+ .-+.++.+++| ||.+. +++ .+.
T Consensus 177 -----------~------~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~-l~~ 235 (246)
T 4f21_A 177 -----------I------TSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEE-IKD 235 (246)
T ss_dssp -----------C------CGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHH-HHH
T ss_pred -----------c------cccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHH-HHH
Confidence 0 00112479999999999999999998888777 34578899998 99764 334 356
Q ss_pred HHHHHHhhc
Q 015550 314 LIDLIKASE 322 (405)
Q Consensus 314 i~~fl~~~~ 322 (405)
+.+||++.-
T Consensus 236 ~~~fL~k~l 244 (246)
T 4f21_A 236 ISNFIAKTF 244 (246)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 788888753
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-15 Score=138.26 Aligned_cols=118 Identities=19% Similarity=0.154 Sum_probs=82.5
Q ss_pred CCEEEEEEEccC------CCCeEEEEecCCCCCCchhh---hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 23 ~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
.|..+.+..+-+ ..|+||++||++++...|.. +...+.. .|+.|+++|.
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~vv~~d~ 89 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAE----------------------HQVIVVAPDT 89 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHH----------------------HTCEEEEECS
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhh----------------------CCeEEEEecc
Confidence 466666655533 23689999999998887743 3344444 3999999998
Q ss_pred CCCCC--------------CCCCCCC-----CCCC-HHHHHHHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCcc
Q 015550 94 RGMGR--------------SSVPVKK-----TEYT-TKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPER 151 (405)
Q Consensus 94 ~G~G~--------------S~~~~~~-----~~~~-~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~ 151 (405)
+++|. +...... ..+. ...+++++..+++.. ..++++++||||||.+|+.+|.++|++
T Consensus 90 ~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~ 169 (283)
T 4b6g_A 90 SPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQER 169 (283)
T ss_dssp SCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGG
T ss_pred ccccccccccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCcc
Confidence 64433 2111000 0112 334467888888776 336899999999999999999999999
Q ss_pred cceEEEeccCC
Q 015550 152 VLSLALLNVTG 162 (405)
Q Consensus 152 v~~lvl~~~~~ 162 (405)
+++++++++..
T Consensus 170 ~~~~~~~s~~~ 180 (283)
T 4b6g_A 170 YQSVSAFSPIL 180 (283)
T ss_dssp CSCEEEESCCC
T ss_pred ceeEEEECCcc
Confidence 99999999863
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-15 Score=142.42 Aligned_cols=215 Identities=13% Similarity=0.049 Sum_probs=123.6
Q ss_pred CCeEEEEecCCCC---CCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCH
Q 015550 36 PTKVILITGLAGT---HDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (405)
Q Consensus 36 ~p~vvllHG~~~~---~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~ 110 (405)
.|+||++||.+.. ... |..++..|+.. .||.|+++|+|+.+... .
T Consensus 112 ~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~---------------------~g~~Vv~~dyR~~p~~~---------~ 161 (365)
T 3ebl_A 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVKL---------------------SKGVVVSVNYRRAPEHR---------Y 161 (365)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH---------------------HTSEEEEECCCCTTTSC---------T
T ss_pred ceEEEEEcCCccccCCCchhhHHHHHHHHHHH---------------------CCCEEEEeeCCCCCCCC---------C
Confidence 3789999997642 222 67788888751 29999999999765432 1
Q ss_pred HHHHHHHHHHHHHh----------CCc-cEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccCCCCCCCCccchhHHH
Q 015550 111 KIMAKDVIALMDHL----------GWK-QAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCPKLDLQTL 176 (405)
Q Consensus 111 ~~~~~dl~~~l~~l----------~~~-~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (405)
....+|+.+.++.+ +.+ +++|+|||+||.+|+.+|.+.++ +++++|+++|........+. .
T Consensus 162 ~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~-----~ 236 (365)
T 3ebl_A 162 PCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTES-----E 236 (365)
T ss_dssp THHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHH-----H
T ss_pred cHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChh-----h
Confidence 22344544444433 234 89999999999999999998776 79999999987432211100 0
Q ss_pred HHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
..... ....... ....+...+............ ... ......
T Consensus 237 ---~~~~~------------~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~--------~p~-~~~~~~ 278 (365)
T 3ebl_A 237 ---RRLDG------------KYFVTLQ--------------DRDWYWKAYLPEDADRDHPAC--------NPF-GPNGRR 278 (365)
T ss_dssp ---HHHTT------------TSSCCHH--------------HHHHHHHHHSCTTCCTTSTTT--------CTT-STTCCC
T ss_pred ---hhcCC------------CcccCHH--------------HHHHHHHHhCCCCCCCCCccc--------CCC-CCcchh
Confidence 00000 0000000 001111111000000000000 000 000112
Q ss_pred hhhcC-CcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccc----ccCHHHHHHHHHHHHHhhcCCC
Q 015550 257 IRSAG-FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS----HERTEEVNQALIDLIKASEKKI 325 (405)
Q Consensus 257 l~~i~-~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~----~e~p~~v~~~i~~fl~~~~~~~ 325 (405)
+..+. .|+|+++|++|.+++. ...+++.+ ...+++++++| +|.++ .++.+++.+.|.+||++...+.
T Consensus 279 l~~~~~pP~Li~~G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 279 LGGLPFAKSLIIVSGLDLTCDR--QLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYG 354 (365)
T ss_dssp CTTSCCCCEEEEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC--
T ss_pred hccCCCCCEEEEEcCcccchhH--HHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 22222 4899999999987653 34444433 46789999999 99765 4567899999999999987543
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.66 E-value=3.1e-16 Score=145.28 Aligned_cols=104 Identities=22% Similarity=0.340 Sum_probs=94.0
Q ss_pred cCCCCeEEEEecCCCCC------CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 015550 33 GRGPTKVILITGLAGTH------DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKT 106 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~------~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~ 106 (405)
.+.+++|||+||++++. ..|..+.+.|.+ +||+|+++|+||+|.|..+
T Consensus 5 ~~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~----------------------~G~~V~~~d~~g~g~s~~~---- 58 (320)
T 1ys1_X 5 AATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQ----------------------RGATVYVANLSGFQSDDGP---- 58 (320)
T ss_dssp TCCSSCEEEECCTTCCSEETTTEESSTTHHHHHHH----------------------TTCCEEECCCCSSCCSSST----
T ss_pred CCCCCEEEEECCCCCCccccchHHHHHHHHHHHHh----------------------CCCEEEEEcCCCCCCCCCC----
Confidence 44567899999999988 789999999987 4999999999999999653
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
..+.+++++++.++++.++.++++++||||||.++..++.++|++|+++|+++++.
T Consensus 59 ~~~~~~l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 59 NGRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp TSHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 35789999999999999999999999999999999999999999999999999864
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-17 Score=156.48 Aligned_cols=105 Identities=21% Similarity=0.322 Sum_probs=87.7
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCe---EEEEecCCCCCCC-----CCCC---
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI---EVCAFDNRGMGRS-----SVPV--- 103 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~---~Vi~~D~~G~G~S-----~~~~--- 103 (405)
..++|||+||++++...|..+++.|.+ +|| +|+++|++|+|.| +...
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~----------------------~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~ 78 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAA----------------------NGYPAEYVKTFEYDTISWALVVETDMLFSGL 78 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHH----------------------TTCCGGGEEEECCCHHHHHHHTTTSTTTTTG
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH----------------------cCCCcceEEEEECCCCCcccccccccccccc
Confidence 446799999999999999999999987 489 7999999999976 1100
Q ss_pred --------------------------CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC---cccce
Q 015550 104 --------------------------KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLS 154 (405)
Q Consensus 104 --------------------------~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~ 154 (405)
.....+.+++++++.+++++++.++++++||||||++++.++.++| ++|++
T Consensus 79 ~~~~G~n~~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~ 158 (484)
T 2zyr_A 79 GSEFGLNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAH 158 (484)
T ss_dssp GGHHHHHHGGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEE
T ss_pred ccccccccccccccccccccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCE
Confidence 0012345677788888888899899999999999999999999998 48999
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
+|+++++
T Consensus 159 LVlIapp 165 (484)
T 2zyr_A 159 LILLDGV 165 (484)
T ss_dssp EEEESCC
T ss_pred EEEECCc
Confidence 9999986
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.65 E-value=9.9e-15 Score=148.67 Aligned_cols=226 Identities=13% Similarity=0.058 Sum_probs=139.2
Q ss_pred cccCCEEEEEEEcc-------CCCCeEEEEecCCCCCCc--hhhhH-hhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 20 LNDNGIKIFYRTYG-------RGPTKVILITGLAGTHDA--WGPQL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 20 ~~~~g~~i~y~~~G-------~~~p~vvllHG~~~~~~~--~~~~~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
...+|.+|.+...- ...|+||++||.++.... |.... ..|.+ +||.|+
T Consensus 455 ~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~----------------------~Gy~Vv 512 (711)
T 4hvt_A 455 TSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVK----------------------NAGVSV 512 (711)
T ss_dssp ECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGG----------------------GTCEEE
T ss_pred ECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHH----------------------CCCEEE
Confidence 44578887765442 134789999998665533 44333 35655 499999
Q ss_pred EecCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh---C---CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 90 AFDNRGMGRSSVPVK--KTEYTTKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~l---~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.+|+||+|.+..... ..........+|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 513 ~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv 592 (711)
T 4hvt_A 513 LANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPI 592 (711)
T ss_dssp EECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred EEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCc
Confidence 999999987642100 00111223344555444443 2 368999999999999999999999999999998876
Q ss_pred CCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhh
Q 015550 162 GGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQI 241 (405)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (405)
..... +.... ....+...+ +.... ....+.+ ..
T Consensus 593 ~D~~~---------------~~~~~-------------~~~~~~~~~-G~p~~-~~~~~~l-~~---------------- 625 (711)
T 4hvt_A 593 LDMIR---------------YKEFG-------------AGHSWVTEY-GDPEI-PNDLLHI-KK---------------- 625 (711)
T ss_dssp CCTTT---------------GGGST-------------TGGGGHHHH-CCTTS-HHHHHHH-HH----------------
T ss_pred cchhh---------------hhccc-------------cchHHHHHh-CCCcC-HHHHHHH-HH----------------
Confidence 32110 00000 000111111 11110 0000111 00
Q ss_pred HHhhhcccChhhhhhhhhcCC--cEEEEeecCCccCCHHHHHHHHHHh----CCCeEEEEcCC-Ccccccc--CHHHHHH
Q 015550 242 HACWMHKMTQKDIQTIRSAGF--LVSVIHGRHDVIAQICYARRLAEKL----YPVARMIDLPG-GHLVSHE--RTEEVNQ 312 (405)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~i~~--Pvlvi~G~~D~~~~~~~~~~l~~~l----~~~~~l~~~~g-gH~~~~e--~p~~v~~ 312 (405)
......+.++++ |+|+++|++|..+|+..+.++++.+ ...++++++++ ||..... +..+...
T Consensus 626 ---------~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~ 696 (711)
T 4hvt_A 626 ---------YAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFI 696 (711)
T ss_dssp ---------HCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHH
T ss_pred ---------cCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHH
Confidence 011233455666 9999999999999999999999888 34578999998 9986543 3455667
Q ss_pred HHHHHHHhhcC
Q 015550 313 ALIDLIKASEK 323 (405)
Q Consensus 313 ~i~~fl~~~~~ 323 (405)
.+.+||.+...
T Consensus 697 ~i~~FL~~~Lg 707 (711)
T 4hvt_A 697 NLYTFFANALK 707 (711)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 78899987653
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=9.8e-15 Score=131.94 Aligned_cols=119 Identities=13% Similarity=0.175 Sum_probs=81.3
Q ss_pred CCEEEEEEEccC-------CCCeEEEEecCCCCCCchhhh-------HhhhcCCCCCCCCchhhhccccCCCCCCCCeEE
Q 015550 23 NGIKIFYRTYGR-------GPTKVILITGLAGTHDAWGPQ-------LKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (405)
Q Consensus 23 ~g~~i~y~~~G~-------~~p~vvllHG~~~~~~~~~~~-------~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~V 88 (405)
.|..+.+..+-+ ..|+||++||++++...|... ++.|.+.. ...++.|
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g------------------~~~~~~v 103 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEG------------------KIKPLII 103 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTT------------------SSCCCEE
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcC------------------CCCCEEE
Confidence 455666555432 236899999999888777554 55555410 0026999
Q ss_pred EEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCC----ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD-HLGW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~-~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+++|.++++.+.... .....++.++++..+++ .++. ++++++||||||.+|+.++.++|+++++++++++.
T Consensus 104 v~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~ 179 (268)
T 1jjf_A 104 VTPNTNAAGPGIADG--YENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 179 (268)
T ss_dssp EEECCCCCCTTCSCH--HHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred EEeCCCCCCcccccc--HHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCC
Confidence 999999987642110 00011223555555555 3343 68999999999999999999999999999999975
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-16 Score=151.46 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=91.1
Q ss_pred CCCeEEEEecCCCCC-Cchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTH-DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~-~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
..|+||++||++++. ..|.. +++.|.+. .+|+|+++|++|+|.|..+. ...+++.
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~~~~~l~~~---------------------~~~~Vi~~D~~g~G~S~~~~--~~~~~~~ 125 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGEDSWPSDMCKKILQV---------------------ETTNCISVDWSSGAKAEYTQ--AVQNIRI 125 (452)
T ss_dssp TSCEEEEECCTTCCSSSSHHHHHHHHHHTT---------------------SCCEEEEEECHHHHTSCHHH--HHHHHHH
T ss_pred CCCEEEEEcCCCCCCCchHHHHHHHHHHhh---------------------CCCEEEEEecccccccccHH--HHHhHHH
Confidence 457899999999998 78987 77777652 28999999999999986332 2446678
Q ss_pred HHHHHHHHHHHh----C--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 113 MAKDVIALMDHL----G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 113 ~~~dl~~~l~~l----~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
+++|+.++++.+ + .++++|+||||||++|..+|.++|++|.++|+++|..+.+
T Consensus 126 ~~~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p~f 184 (452)
T 1w52_X 126 VGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEPCF 184 (452)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTT
T ss_pred HHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccccc
Confidence 889999999888 5 6899999999999999999999999999999999886544
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-16 Score=151.15 Aligned_cols=109 Identities=20% Similarity=0.356 Sum_probs=91.2
Q ss_pred CCCeEEEEecCCCCC-Cchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTH-DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~-~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
..|+||++||++++. ..|.. +++.|.+. .+|+|+++|++|+|.|..+. ...++..
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~---------------------~~~~Vi~~D~~G~G~S~~~~--~~~~~~~ 125 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQV---------------------EKVNCICVDWRRGSRTEYTQ--ASYNTRV 125 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTT---------------------CCEEEEEEECHHHHSSCHHH--HHHHHHH
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhh---------------------CCCEEEEEechhcccCchhH--hHhhHHH
Confidence 456899999999998 78988 56777652 38999999999999996332 2456678
Q ss_pred HHHHHHHHHHHh----CC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 113 MAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 113 ~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
+++|+.++++.+ +. ++++|+||||||++|..+|.++|++|.++|+++|..+.+.
T Consensus 126 ~~~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p~f~ 185 (452)
T 1bu8_A 126 VGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCFQ 185 (452)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCccccC
Confidence 889999999988 54 7999999999999999999999999999999998865443
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.8e-16 Score=150.81 Aligned_cols=105 Identities=17% Similarity=0.285 Sum_probs=87.9
Q ss_pred CCCeEEEEecCCCCC-Cchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTH-DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~-~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
..|+||++||++++. ..|.. +.+.|.+. .+|+|+++|+||+|.|..+. ...+++.
T Consensus 69 ~~~~vvllHG~~~s~~~~w~~~~~~~l~~~---------------------~~~~Vi~~D~~g~g~s~~~~--~~~~~~~ 125 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWLSDMCKNMFQV---------------------EKVNCICVDWKGGSKAQYSQ--ASQNIRV 125 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHHHHHHHHHHHH---------------------CCEEEEEEECHHHHTSCHHH--HHHHHHH
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhc---------------------CCcEEEEEECccccCccchh--hHhhHHH
Confidence 456899999999998 67887 77777631 29999999999999986332 2345677
Q ss_pred HHHHHHHHHHHh----C--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 113 MAKDVIALMDHL----G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 113 ~~~dl~~~l~~l----~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+++|+.++++.+ + .++++|+||||||.+|+.+|.++|++|++++++++..
T Consensus 126 ~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 126 VGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred HHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 888898888877 4 6799999999999999999999999999999999874
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.62 E-value=9.8e-16 Score=140.00 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=90.6
Q ss_pred cCCCCeEEEEecCCCCCC-----chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCC
Q 015550 33 GRGPTKVILITGLAGTHD-----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE 107 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~-----~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~ 107 (405)
.+.+|+|||+||++++.. .|..+.+.|.+ +||+|+++|+||+|.+.
T Consensus 4 ~~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~----------------------~G~~v~~~d~~g~g~s~------- 54 (285)
T 1ex9_A 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRR----------------------DGAQVYVTEVSQLDTSE------- 54 (285)
T ss_dssp TCCSSCEEEECCTTCCSEETTEESSTTHHHHHHH----------------------TTCCEEEECCCSSSCHH-------
T ss_pred CCCCCeEEEeCCCCCCccccccccHHHHHHHHHh----------------------CCCEEEEEeCCCCCCch-------
Confidence 345678999999998854 89999999987 49999999999999873
Q ss_pred CCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 108 YTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 108 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+.+++++++.++++.++.++++++||||||.++..++..+|++|+++|+++++.
T Consensus 55 ~~~~~~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 55 VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred hhHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 4688999999999999998999999999999999999999999999999999864
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.61 E-value=4.9e-16 Score=149.80 Aligned_cols=109 Identities=18% Similarity=0.288 Sum_probs=88.1
Q ss_pred CCCeEEEEecCCCCC-Cchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTH-DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~-~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
+.|+||++||++++. ..|.. +++.|... .+|+|+++|++|+|.|..+. ..++++.
T Consensus 68 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~---------------------~~~~VI~vD~~g~g~s~y~~--~~~~~~~ 124 (449)
T 1hpl_A 68 GRKTRFIIHGFIDKGEESWLSTMCQNMFKV---------------------ESVNCICVDWKSGSRTAYSQ--ASQNVRI 124 (449)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHHHH---------------------CCEEEEEEECHHHHSSCHHH--HHHHHHH
T ss_pred CCCeEEEEecCCCCCCccHHHHHHHHHHhc---------------------CCeEEEEEeCCcccCCccHH--HHHHHHH
Confidence 457899999999985 57876 56766210 28999999999999985322 1346677
Q ss_pred HHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 113 MAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 113 ~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
+++++.++++.+ +.++++|+||||||.+|..+|.++|++|.++++++|..+.+.
T Consensus 125 v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p~f~ 184 (449)
T 1hpl_A 125 VGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEPCFQ 184 (449)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccccccc
Confidence 888888888876 468999999999999999999999999999999999876543
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.61 E-value=8.2e-16 Score=143.11 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=90.2
Q ss_pred CCeEEEEecCCC----------CCCch----hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE---EEEecCCCCCC
Q 015550 36 PTKVILITGLAG----------THDAW----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGR 98 (405)
Q Consensus 36 ~p~vvllHG~~~----------~~~~~----~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~---Vi~~D~~G~G~ 98 (405)
+++|||+||+++ +...| ..+++.|.+ +||. |+++|++|+|.
T Consensus 40 ~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~----------------------~Gy~~~~V~~~D~~g~G~ 97 (342)
T 2x5x_A 40 KTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKA----------------------RGYNDCEIFGVTYLSSSE 97 (342)
T ss_dssp SCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHH----------------------TTCCTTSEEEECCSCHHH
T ss_pred CCeEEEECCcCCCcccccccccccccccccHHHHHHHHHh----------------------CCCCCCeEEEEeCCCCCc
Confidence 456999999999 45688 889998887 4888 99999999998
Q ss_pred CCCCC--CCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC--CcccceEEEeccCCCC
Q 015550 99 SSVPV--KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGG 164 (405)
Q Consensus 99 S~~~~--~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 164 (405)
|..+. ....+..+++++++.+++++++.++++|+||||||.++..++.++ |++|+++|+++++..+
T Consensus 98 S~~~~~~~~~~~~~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 98 QGSAQYNYHSSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HTCGGGCCBCHHHHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred cCCccccCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 86542 112356778888888888999989999999999999999999998 9999999999987544
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.7e-13 Score=123.46 Aligned_cols=117 Identities=20% Similarity=0.211 Sum_probs=82.9
Q ss_pred CCEEEEEEEccCCCCeEEEEecCC--CCCCchhh---hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLA--GTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~--~~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.|..+.+....+++|+||++||++ ++...|.. +.+.+.. .|+.|+++|.++.+
T Consensus 21 ~~~~~~~~~~P~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~----------------------~~~~vv~pd~~~~~ 78 (280)
T 1r88_A 21 MGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAG----------------------KGISVVAPAGGAYS 78 (280)
T ss_dssp TTEEEEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTT----------------------SSSEEEEECCCTTS
T ss_pred cCCcceEEEeCCCCCEEEEECCCCCCCChhhhhhcccHHHHHhc----------------------CCeEEEEECCCCCC
Confidence 455665552223357899999995 45667765 3344554 48999999997642
Q ss_pred -CCCCCCCCCCCCH-HHHHHHHHHHHHH-hCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 98 -RSSVPVKKTEYTT-KIMAKDVIALMDH-LGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 98 -~S~~~~~~~~~~~-~~~~~dl~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.++.... ....+ ..+++++..++++ ++++ +++|+||||||.+|+.+|.++|+++++++++++..
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 147 (280)
T 1r88_A 79 MYTNWEQD-GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFL 147 (280)
T ss_dssp TTSBCSSC-TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCC
T ss_pred ccCCCCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCcc
Confidence 2221111 11134 3456788888887 6765 89999999999999999999999999999999763
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.5e-14 Score=127.11 Aligned_cols=117 Identities=22% Similarity=0.232 Sum_probs=84.5
Q ss_pred CEEEEEEEccCCCCeEEEEecCC--CCCCchhhhH---hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC-C
Q 015550 24 GIKIFYRTYGRGPTKVILITGLA--GTHDAWGPQL---KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-G 97 (405)
Q Consensus 24 g~~i~y~~~G~~~p~vvllHG~~--~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~-G 97 (405)
+..+.+......+++||++||++ .+...|..+. +.+.+ .++.|+++|.+|. +
T Consensus 17 ~~~~~v~~~p~~~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~----------------------~~~~vv~pd~~~~~~ 74 (280)
T 1dqz_A 17 GRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQ----------------------SGLSVIMPVGGQSSF 74 (280)
T ss_dssp TEEEEEEEECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTT----------------------SSSEEEEECCCTTCT
T ss_pred CceeEEEEcCCCCCEEEEECCCCCCCCcccccccCcHHHHHhc----------------------CCeEEEEECCCCCcc
Confidence 45566555433235899999995 4777787643 34554 4899999998754 2
Q ss_pred CCCC--CCCC----CCCCHHHH-HHHHHHHHHH-hCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 98 RSSV--PVKK----TEYTTKIM-AKDVIALMDH-LGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 98 ~S~~--~~~~----~~~~~~~~-~~dl~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+.. +... ..++++++ ++++..++++ +++. +++|+||||||.+|+.+|.++|++++++|++++..
T Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 149 (280)
T 1dqz_A 75 YTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp TSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred ccCCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcc
Confidence 2221 1100 13455554 5899999987 7764 89999999999999999999999999999999863
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-15 Score=146.39 Aligned_cols=108 Identities=18% Similarity=0.294 Sum_probs=87.9
Q ss_pred CCCeEEEEecCCCCCC-chhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTHD-AWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~-~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
+.|+||++||++++.. .|.. +.+.|... .+|+|+++|++|+|.|..+. ..++++.
T Consensus 69 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~---------------------~~~~VI~vD~~g~g~s~y~~--~~~~~~~ 125 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKV---------------------EEVNCICVDWKKGSQTSYTQ--AANNVRV 125 (450)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTT---------------------CCEEEEEEECHHHHSSCHHH--HHHHHHH
T ss_pred CCCeEEEEccCCCCCCcchHHHHHHHHHhc---------------------CCeEEEEEeCccccCCcchH--HHHHHHH
Confidence 4578999999998875 7876 45565431 27999999999999875322 2456778
Q ss_pred HHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 113 MAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 113 ~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
+++++.++++.+ +.++++|+||||||.+|..+|.++|+ |.++++++|..+.+.
T Consensus 126 ~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p~f~ 184 (450)
T 1rp1_A 126 VGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEASFQ 184 (450)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCTTTT
T ss_pred HHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccccccc
Confidence 889999999877 46899999999999999999999999 999999999876553
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-13 Score=125.57 Aligned_cols=117 Identities=17% Similarity=0.154 Sum_probs=83.1
Q ss_pred CEEEEEEEcc--CCCCeEEEEecC--CCCCCchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 24 GIKIFYRTYG--RGPTKVILITGL--AGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 24 g~~i~y~~~G--~~~p~vvllHG~--~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
+.++.+.... ...|+||++||+ +++...|... .+.+.. .++.|+++|.++.
T Consensus 20 ~~~i~v~~~p~~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~----------------------~~~~vv~p~~~~~ 77 (304)
T 1sfr_A 20 GRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQ----------------------SGLSVVMPVGGQS 77 (304)
T ss_dssp TEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTT----------------------SSCEEEEECCCTT
T ss_pred CCceEEEECCCCCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhc----------------------CCeEEEEECCCCC
Confidence 4455554222 345789999999 5677778764 244444 4899999998764
Q ss_pred -CCCCCCCCC------CCCCHHHH-HHHHHHHHHH-hCCc--cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 97 -GRSSVPVKK------TEYTTKIM-AKDVIALMDH-LGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 97 -G~S~~~~~~------~~~~~~~~-~~dl~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
+.++..... ....++++ ++++..++++ +++. +++|+||||||.+|+.+|.++|++++++|++++..
T Consensus 78 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 154 (304)
T 1sfr_A 78 SFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (304)
T ss_dssp CTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred ccccccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCcc
Confidence 222211100 13455555 4788888887 6655 89999999999999999999999999999999763
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-13 Score=127.03 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=78.3
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
+.++|+|+||++++...|.++.+.| ++.|+++|+|+ . + ...++++++
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l-------------------------~~~v~~~~~~~--~---~---~~~~~~~~a 91 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRL-------------------------SIPTYGLQCTR--A---A---PLDSIHSLA 91 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHC-------------------------SSCEEEECCCT--T---S---CTTCHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhc-------------------------CCCEEEEECCC--C---C---CcCCHHHHH
Confidence 3456999999999999999988776 37899999993 1 1 245899999
Q ss_pred HHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCC---cc---cceEEEeccCC
Q 015550 115 KDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP---ER---VLSLALLNVTG 162 (405)
Q Consensus 115 ~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p---~~---v~~lvl~~~~~ 162 (405)
+++.+.++.+.. ++++++||||||.+|+.+|.+.+ ++ +.+++++++.+
T Consensus 92 ~~~~~~i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 92 AYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHTTTCSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 999999998864 78999999999999999998764 45 89999998763
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.55 E-value=9.9e-14 Score=140.11 Aligned_cols=121 Identities=13% Similarity=-0.037 Sum_probs=86.0
Q ss_pred ccCCEEEEEEEccC---C-CCeEEEEecCCCCC-------Cchhh-hH---hhhcCCCCCCCCchhhhccccCCCCCCCC
Q 015550 21 NDNGIKIFYRTYGR---G-PTKVILITGLAGTH-------DAWGP-QL---KGLAGTDKPNDDDETILQDSVESGDGGAG 85 (405)
Q Consensus 21 ~~~g~~i~y~~~G~---~-~p~vvllHG~~~~~-------~~~~~-~~---~~L~~~~~~~~~~~~~~~~~~~~~l~~~g 85 (405)
..||.+|++..+.+ + .|+||++||++.+. ..|.. +. ..|++ +|
T Consensus 32 ~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~----------------------~G 89 (615)
T 1mpx_A 32 MRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVE----------------------GG 89 (615)
T ss_dssp CTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHH----------------------TT
T ss_pred CCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHh----------------------CC
Confidence 55898998876643 2 25788889988753 13332 22 55655 59
Q ss_pred eEEEEecCCCCCCCCCCCCCCC-----CCH--HHHHHHHHHHHHHhC----C--ccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 86 IEVCAFDNRGMGRSSVPVKKTE-----YTT--KIMAKDVIALMDHLG----W--KQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 86 ~~Vi~~D~~G~G~S~~~~~~~~-----~~~--~~~~~dl~~~l~~l~----~--~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
|.|+.+|+||+|.|........ +.. ...++|+.++++.+. + .++.++||||||.+++.+|..+|+++
T Consensus 90 y~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l 169 (615)
T 1mpx_A 90 YIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPAL 169 (615)
T ss_dssp CEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTE
T ss_pred eEEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCce
Confidence 9999999999999976543110 110 034666666666542 2 38999999999999999998889999
Q ss_pred ceEEEeccCCC
Q 015550 153 LSLALLNVTGG 163 (405)
Q Consensus 153 ~~lvl~~~~~~ 163 (405)
+++|++++...
T Consensus 170 ~a~v~~~~~~d 180 (615)
T 1mpx_A 170 KVAVPESPMID 180 (615)
T ss_dssp EEEEEESCCCC
T ss_pred EEEEecCCccc
Confidence 99999998765
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.54 E-value=5.7e-14 Score=140.96 Aligned_cols=121 Identities=12% Similarity=-0.011 Sum_probs=90.4
Q ss_pred ccccCCEEEEEEEccC---C-CCeEEEEecCCCCCCchhh---hH-hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 19 ALNDNGIKIFYRTYGR---G-PTKVILITGLAGTHDAWGP---QL-KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~---~-~p~vvllHG~~~~~~~~~~---~~-~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
+...||.+|++..+.+ + .|+||++||++.....+.. .. ..|.+ +||.|++
T Consensus 14 i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~----------------------~Gy~vv~ 71 (587)
T 3i2k_A 14 VPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVR----------------------DGYAVVI 71 (587)
T ss_dssp EECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHH----------------------TTCEEEE
T ss_pred EECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHH----------------------CCCEEEE
Confidence 3455899998876643 2 2678888998877543322 23 55655 4999999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC-CCC
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT-GGG 164 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~-~~~ 164 (405)
+|.||+|.|...... ....++|+.++++.+. ..++.++||||||.+++.+|..+|++++++|++++. ...
T Consensus 72 ~D~RG~G~S~g~~~~----~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 72 QDTRGLFASEGEFVP----HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp EECTTSTTCCSCCCT----TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred EcCCCCCCCCCcccc----ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 999999999865432 2345677777777663 258999999999999999999999999999999987 544
Q ss_pred C
Q 015550 165 F 165 (405)
Q Consensus 165 ~ 165 (405)
+
T Consensus 148 ~ 148 (587)
T 3i2k_A 148 R 148 (587)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.3e-14 Score=133.93 Aligned_cols=118 Identities=18% Similarity=0.121 Sum_probs=88.4
Q ss_pred EEEEEEEc-----cCCCCeEEEEecCCCCCCchh---hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 25 IKIFYRTY-----GRGPTKVILITGLAGTHDAWG---PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 25 ~~i~y~~~-----G~~~p~vvllHG~~~~~~~~~---~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+.+|... +++. ||||+||..++...+. .....|++. -|+.|+++|+|||
T Consensus 23 f~qRy~~~~~~~~~~g~-Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~---------------------~~~~Vi~~DhRg~ 80 (446)
T 3n2z_B 23 FNQRYLVADKYWKKNGG-SILFYTGNEGDIIWFCNNTGFMWDVAEE---------------------LKAMLVFAEHRYY 80 (446)
T ss_dssp EEEEEEEECTTCCTTTC-EEEEEECCSSCHHHHHHHCHHHHHHHHH---------------------HTEEEEEECCTTS
T ss_pred EEEEEEEehhhcCCCCC-CEEEEeCCCCcchhhhhcccHHHHHHHH---------------------hCCcEEEEecCCC
Confidence 34555544 3445 4899999888765321 234444442 1789999999999
Q ss_pred CCCCCCC--------CCCCCCHHHHHHHHHHHHHHhCC-------ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 97 GRSSVPV--------KKTEYTTKIMAKDVIALMDHLGW-------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 97 G~S~~~~--------~~~~~~~~~~~~dl~~~l~~l~~-------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
|+|.... ....++.+++++|+..+++++.. .+++++||||||++|+.++.++|++|.++|+.+++
T Consensus 81 G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssap 160 (446)
T 3n2z_B 81 GESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160 (446)
T ss_dssp TTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred CCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccc
Confidence 9996421 11234789999999999998854 38999999999999999999999999999998876
Q ss_pred CCC
Q 015550 162 GGG 164 (405)
Q Consensus 162 ~~~ 164 (405)
...
T Consensus 161 v~~ 163 (446)
T 3n2z_B 161 IWQ 163 (446)
T ss_dssp TTC
T ss_pred hhc
Confidence 543
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.47 E-value=9.8e-13 Score=133.42 Aligned_cols=123 Identities=13% Similarity=-0.036 Sum_probs=84.6
Q ss_pred cccCCEEEEEEEccC---C-CCeEEEEecCCCCC--------Cchhhh---H-hhhcCCCCCCCCchhhhccccCCCCCC
Q 015550 20 LNDNGIKIFYRTYGR---G-PTKVILITGLAGTH--------DAWGPQ---L-KGLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~---~-~p~vvllHG~~~~~--------~~~~~~---~-~~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
...||.+|+...+-+ + .|+||++||++... ..|... . ..|+.
T Consensus 43 ~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~---------------------- 100 (652)
T 2b9v_A 43 PMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVE---------------------- 100 (652)
T ss_dssp ECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHH----------------------
T ss_pred ECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHh----------------------
Confidence 345888888765533 2 25688889887541 112221 1 55555
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCC-----CCH--HHHHHHHHHHHHHh----CC--ccEEEEEEChhHHHHHHHHHhCCc
Q 015550 84 AGIEVCAFDNRGMGRSSVPVKKTE-----YTT--KIMAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVPE 150 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~~~~-----~~~--~~~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~ 150 (405)
+||.|+.+|+||+|.|........ +.. ...++|+.++++.+ ++ .+|.++||||||.+++.+|..+|+
T Consensus 101 ~GyaVv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~ 180 (652)
T 2b9v_A 101 GGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHP 180 (652)
T ss_dssp TTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCT
T ss_pred CCCEEEEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCC
Confidence 599999999999999976543110 110 13556666666654 22 389999999999999999998999
Q ss_pred ccceEEEeccCCCC
Q 015550 151 RVLSLALLNVTGGG 164 (405)
Q Consensus 151 ~v~~lvl~~~~~~~ 164 (405)
+++++|.+++....
T Consensus 181 ~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 181 ALKVAAPESPMVDG 194 (652)
T ss_dssp TEEEEEEEEECCCT
T ss_pred ceEEEEeccccccc
Confidence 99999999987653
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.5e-13 Score=128.73 Aligned_cols=102 Identities=15% Similarity=0.200 Sum_probs=75.8
Q ss_pred CeEEEEecCCCCCCc--------------hh----hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 37 TKVILITGLAGTHDA--------------WG----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 37 p~vvllHG~~~~~~~--------------~~----~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
|+||++||++++... |. .++..|++ +||.|+++|+||+|.
T Consensus 115 P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~----------------------~G~~Vl~~D~rg~G~ 172 (391)
T 3g8y_A 115 PGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVK----------------------EGYVAVAVDNAAAGE 172 (391)
T ss_dssp EEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHT----------------------TTCEEEECCCTTSGG
T ss_pred CEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHH----------------------CCCEEEEecCCCccc
Confidence 689999999887542 23 56777777 599999999999999
Q ss_pred CCCCCCC---CCCCHHHHH---------------HHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccce
Q 015550 99 SSVPVKK---TEYTTKIMA---------------KDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLS 154 (405)
Q Consensus 99 S~~~~~~---~~~~~~~~~---------------~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~ 154 (405)
|..+... ..++...++ .|+.++++.+. .+++.++||||||.+++.+|... ++|++
T Consensus 173 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a 251 (391)
T 3g8y_A 173 ASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYA 251 (391)
T ss_dssp GCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCE
T ss_pred cCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeE
Confidence 9754321 113443333 67777777662 35799999999999999988765 58999
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
+|+.++.
T Consensus 252 ~v~~~~~ 258 (391)
T 3g8y_A 252 FVYNDFL 258 (391)
T ss_dssp EEEESCB
T ss_pred EEEccCC
Confidence 9988765
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-12 Score=124.24 Aligned_cols=117 Identities=14% Similarity=0.164 Sum_probs=80.2
Q ss_pred cCCEEEEEEEc---c-C-CCCeEEEEecCCCCCCc--------------hh----hhHhhhcCCCCCCCCchhhhccccC
Q 015550 22 DNGIKIFYRTY---G-R-GPTKVILITGLAGTHDA--------------WG----PQLKGLAGTDKPNDDDETILQDSVE 78 (405)
Q Consensus 22 ~~g~~i~y~~~---G-~-~~p~vvllHG~~~~~~~--------------~~----~~~~~L~~~~~~~~~~~~~~~~~~~ 78 (405)
.+|.++....+ + . ..|+||++||.+++... |. .++..|++
T Consensus 100 ~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~----------------- 162 (398)
T 3nuz_A 100 LPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVK----------------- 162 (398)
T ss_dssp STTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHT-----------------
T ss_pred CCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHH-----------------
Confidence 35555554433 2 1 23689999999886542 22 46777777
Q ss_pred CCCCCCCeEEEEecCCCCCCCCCCCCC---CCCC---------------HHHHHHHHHHHHHHhC------CccEEEEEE
Q 015550 79 SGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYT---------------TKIMAKDVIALMDHLG------WKQAHVFGH 134 (405)
Q Consensus 79 ~~l~~~g~~Vi~~D~~G~G~S~~~~~~---~~~~---------------~~~~~~dl~~~l~~l~------~~~v~lvGh 134 (405)
+||.|+++|+||+|.|...... ..+. ....+.|+.++++.+. .+++.++||
T Consensus 163 -----~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~ 237 (398)
T 3nuz_A 163 -----EGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGF 237 (398)
T ss_dssp -----TTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEE
T ss_pred -----CCCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 5999999999999998643310 0011 1223467777777763 247999999
Q ss_pred ChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 135 SMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 135 S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
||||.+++.+|... ++|+++|.++..
T Consensus 238 S~GG~~a~~~aa~~-~~i~a~v~~~~~ 263 (398)
T 3nuz_A 238 SLGTEPMMVLGTLD-TSIYAFVYNDFL 263 (398)
T ss_dssp GGGHHHHHHHHHHC-TTCCEEEEESCB
T ss_pred CHhHHHHHHHHhcC-CcEEEEEEeccc
Confidence 99999999888875 589999887643
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.42 E-value=3.2e-15 Score=143.03 Aligned_cols=108 Identities=19% Similarity=0.289 Sum_probs=80.3
Q ss_pred CCCeEEEEecCCCC--------CCchh----hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 35 GPTKVILITGLAGT--------HDAWG----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 35 ~~p~vvllHG~~~~--------~~~~~----~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
.+++|||+||++++ ...|. .+++.|.+ +||+|+++|+||+|.|...
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~----------------------~Gy~Via~Dl~G~G~S~~~ 108 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRK----------------------AGYETYEASVSALASNHER 108 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHH----------------------TTCCEEEECCCSSSCHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHh----------------------CCCEEEEEcCCCCCCCccc
Confidence 34579999999874 35674 58888876 4999999999999988521
Q ss_pred CC-----------------CCCCCHHHHHHHHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHh-----------------
Q 015550 103 VK-----------------KTEYTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAM----------------- 147 (405)
Q Consensus 103 ~~-----------------~~~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~----------------- 147 (405)
.. ...++++++++|+.+++++++. ++++|+||||||.++..+|..
T Consensus 109 ~~~l~~~i~~g~g~sg~~~~~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg 188 (431)
T 2hih_A 109 AVELYYYLKGGRVDYGAAHSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGG 188 (431)
T ss_dssp HHHHHHHHHCEEEECCHHHHHHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCS
T ss_pred hHHhhhhhhhccccccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhcccccc
Confidence 10 0012233344555566666653 799999999999999999876
Q ss_pred ---------CCcccceEEEeccCCCC
Q 015550 148 ---------VPERVLSLALLNVTGGG 164 (405)
Q Consensus 148 ---------~p~~v~~lvl~~~~~~~ 164 (405)
+|++|.++|+++++..+
T Consensus 189 ~i~~l~~g~~p~~V~slv~i~tP~~G 214 (431)
T 2hih_A 189 IISELFKGGQDNMVTSITTIATPHNG 214 (431)
T ss_dssp CCCHHHHCCCCSCEEEEEEESCCTTC
T ss_pred ccccccccCcccceeEEEEECCCCCC
Confidence 78999999999987544
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=7.7e-12 Score=124.09 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=87.3
Q ss_pred cccCCEEEEEEEccC---C-CCeEEEEecCCCCCC-chh----------------------hhHhhhcCCCCCCCCchhh
Q 015550 20 LNDNGIKIFYRTYGR---G-PTKVILITGLAGTHD-AWG----------------------PQLKGLAGTDKPNDDDETI 72 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~---~-~p~vvllHG~~~~~~-~~~----------------------~~~~~L~~~~~~~~~~~~~ 72 (405)
...||.+|+...+-+ + -|+||+.||++.+.. .+. +....|++
T Consensus 47 ~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~----------- 115 (560)
T 3iii_A 47 EMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVP----------- 115 (560)
T ss_dssp ECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGG-----------
T ss_pred ECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHh-----------
Confidence 345899988766643 2 267888999998742 111 11344544
Q ss_pred hccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---C--ccEEEEEEChhHHHHHHHHHh
Q 015550 73 LQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG---W--KQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 73 ~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~---~--~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+||.|+++|.||+|.|..... .+. ....+|+.++++.+. + .+|.++||||||.+++.+|+.
T Consensus 116 -----------~Gy~vv~~D~RG~G~S~G~~~--~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~ 181 (560)
T 3iii_A 116 -----------NDYVVVKVALRGSDKSKGVLS--PWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASL 181 (560)
T ss_dssp -----------GTCEEEEEECTTSTTCCSCBC--TTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTT
T ss_pred -----------CCCEEEEEcCCCCCCCCCccc--cCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhc
Confidence 699999999999999986543 222 356777777777652 2 489999999999999999999
Q ss_pred CCcccceEEEeccCC
Q 015550 148 VPERVLSLALLNVTG 162 (405)
Q Consensus 148 ~p~~v~~lvl~~~~~ 162 (405)
.|++++++|..++..
T Consensus 182 ~p~~l~aiv~~~~~~ 196 (560)
T 3iii_A 182 NPPHLKAMIPWEGLN 196 (560)
T ss_dssp CCTTEEEEEEESCCC
T ss_pred CCCceEEEEecCCcc
Confidence 999999999998764
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=122.96 Aligned_cols=103 Identities=18% Similarity=0.281 Sum_probs=73.9
Q ss_pred CCCeEEEEecCCCCC-------CchhhhH----hhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC
Q 015550 35 GPTKVILITGLAGTH-------DAWGPQL----KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (405)
Q Consensus 35 ~~p~vvllHG~~~~~-------~~~~~~~----~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~ 103 (405)
.+++|||+||++++. ..|..+. +.|.+ +||+|+++|++|+|.|..
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~----------------------~G~~Via~Dl~g~G~s~~-- 60 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLND----------------------NGYRTYTLAVGPLSSNWD-- 60 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHH----------------------TTCCEEEECCCSSBCHHH--
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHH----------------------CCCEEEEecCCCCCCccc--
Confidence 345699999998875 3476444 88876 499999999999997631
Q ss_pred CCCCCCHHHHHHHHH------------------------HHHHH-hCCccEEEEEEChhHHHHHHHHHh-----------
Q 015550 104 KKTEYTTKIMAKDVI------------------------ALMDH-LGWKQAHVFGHSMGAMIACKLAAM----------- 147 (405)
Q Consensus 104 ~~~~~~~~~~~~dl~------------------------~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~----------- 147 (405)
...++.+.+. +++++ .+.++++||||||||.++..++..
T Consensus 61 -----~a~~l~~~i~~~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~ 135 (387)
T 2dsn_A 61 -----RACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREY 135 (387)
T ss_dssp -----HHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHH
T ss_pred -----cHHHHHHHHHhhhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhcccccccccc
Confidence 1112222221 11222 467899999999999999999973
Q ss_pred --------CC------cccceEEEeccCCCCCC
Q 015550 148 --------VP------ERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 148 --------~p------~~v~~lvl~~~~~~~~~ 166 (405)
+| ++|.++|+++++..+..
T Consensus 136 ~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~Gs~ 168 (387)
T 2dsn_A 136 AKAHNVSLSPLFEGGHHFVLSVTTIATPHDGTT 168 (387)
T ss_dssp HHHHTCCCCGGGTCCCCCEEEEEEESCCTTCCG
T ss_pred ccccccccCccccccccceeEEEEECCCCCCcH
Confidence 36 79999999998765543
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.6e-12 Score=121.28 Aligned_cols=59 Identities=17% Similarity=0.057 Sum_probs=46.2
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhh
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKAS 321 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~ 321 (405)
..++|++++||.+|.++|++.++++++.+ ..+++++++++ +|....+ . ...+.+||++.
T Consensus 342 ~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~~----~~d~l~WL~~r 405 (462)
T 3guu_A 342 VPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIFG----LVPSLWFIKQA 405 (462)
T ss_dssp CCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHHT----HHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhhh----HHHHHHHHHHH
Confidence 56799999999999999999999999877 34688999998 9987653 3 34445555543
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=8.3e-10 Score=101.16 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=72.1
Q ss_pred CeEEEEecCCCCCCchh-------hhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCC
Q 015550 37 TKVILITGLAGTHDAWG-------PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~-------~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~ 109 (405)
|+||++||.+++...|. .++..|..... -.++.|+++|.+|- +... ..+
T Consensus 70 Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~------------------~~~~ivv~pd~~~~--~~~~---~~~- 125 (297)
T 1gkl_A 70 NIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGE------------------LEPLIVVTPTFNGG--NCTA---QNF- 125 (297)
T ss_dssp EEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTS------------------SCCEEEEECCSCST--TCCT---TTH-
T ss_pred CEEEEECCCCCCcchhhcccchHHHHHHHHHHcCC------------------CCCEEEEEecCcCC--ccch---HHH-
Confidence 57888999988776553 34555544100 02699999998752 2211 122
Q ss_pred HHHHHHHHHHHHHHh-C--------------CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 110 TKIMAKDVIALMDHL-G--------------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l-~--------------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.+.+++++..+++.. . ..++.++|+||||.+|+.++.++|+++++++++++.
T Consensus 126 ~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~ 192 (297)
T 1gkl_A 126 YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 192 (297)
T ss_dssp HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccc
Confidence 345567888888764 2 246999999999999999999999999999999976
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.4e-10 Score=102.52 Aligned_cols=47 Identities=11% Similarity=0.268 Sum_probs=38.7
Q ss_pred HHHHHHHHH-hCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 115 KDVIALMDH-LGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~-l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+++..+++. ++. +++.++||||||.+++.++.++|+.+++++++++.
T Consensus 137 ~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~ 186 (275)
T 2qm0_A 137 EELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPS 186 (275)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred HHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCce
Confidence 455555554 333 58999999999999999999999999999999876
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-10 Score=109.34 Aligned_cols=106 Identities=15% Similarity=0.088 Sum_probs=67.9
Q ss_pred CCeEEEEecCCCCC-CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC-CCCCCCCCCCCC-HHH
Q 015550 36 PTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG-RSSVPVKKTEYT-TKI 112 (405)
Q Consensus 36 ~p~vvllHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G-~S~~~~~~~~~~-~~~ 112 (405)
.|+|+++||.+... ..+..++..|..... -..+.|+++|.+|++ ++..... ... .+.
T Consensus 197 ~PvlvllHG~~~~~~~~~~~~~~~l~~~g~------------------~~p~iVV~~d~~~~~~r~~~~~~--~~~~~~~ 256 (403)
T 3c8d_A 197 RPLAVLLDGEFWAQSMPVWPVLTSLTHRQQ------------------LPPAVYVLIDAIDTTHRAHELPC--NADFWLA 256 (403)
T ss_dssp CCEEEESSHHHHHHTSCCHHHHHHHHHTTS------------------SCSCEEEEECCCSHHHHHHHSSS--CHHHHHH
T ss_pred CCEEEEeCCHHHhhcCcHHHHHHHHHHcCC------------------CCCeEEEEECCCCCccccccCCC--hHHHHHH
Confidence 47899999953211 123345566654100 013459999998732 2211110 111 233
Q ss_pred HHHHHHHHHHHh-C----CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 113 MAKDVIALMDHL-G----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 113 ~~~dl~~~l~~l-~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+++++..+++.. . .++++|+||||||.+|+.++.++|+++++++++++.
T Consensus 257 l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~ 310 (403)
T 3c8d_A 257 VQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGS 310 (403)
T ss_dssp HHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCC
T ss_pred HHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccc
Confidence 346677667653 3 258999999999999999999999999999999876
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.87 E-value=3.8e-07 Score=87.77 Aligned_cols=139 Identities=15% Similarity=0.072 Sum_probs=81.6
Q ss_pred ccccC-CEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEec
Q 015550 19 ALNDN-GIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (405)
Q Consensus 19 ~~~~~-g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D 92 (405)
+++++ +.+++|.-... .+|.+|++||.+|++..+..+. ++....- +.|...... -..--.+..+++-+|
T Consensus 25 yv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~-e~GP~~~--~~~~~~l~~--n~~sw~~~~~~lfiD 99 (452)
T 1ivy_A 25 YLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLT-EHGPFLV--QPDGVTLEY--NPYSWNLIANVLYLE 99 (452)
T ss_dssp EEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHT-TTSSEEE--CTTSSCEEE--CTTCGGGSSEEEEEC
T ss_pred EEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHH-hcCCcEE--eCCCceeee--CCCcccccccEEEEe
Confidence 34444 57888866543 3578999999999987764332 1111000 000000000 000001367899999
Q ss_pred C-CCCCCCCCCCCCCCCCHHHHHHHHHH----HHHH---hCCccEEEEEEChhHHHHHHHHHh----CCcccceEEEecc
Q 015550 93 N-RGMGRSSVPVKKTEYTTKIMAKDVIA----LMDH---LGWKQAHVFGHSMGAMIACKLAAM----VPERVLSLALLNV 160 (405)
Q Consensus 93 ~-~G~G~S~~~~~~~~~~~~~~~~dl~~----~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~ 160 (405)
. .|.|.|.........+.+..++|+.+ +++. +...+++|.|+|+||..+..+|.. .+-.++++++.++
T Consensus 100 qP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 100 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp CSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred cCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 6 79999974332122234455555544 4443 234689999999999976666654 3567899999998
Q ss_pred CC
Q 015550 161 TG 162 (405)
Q Consensus 161 ~~ 162 (405)
..
T Consensus 180 ~~ 181 (452)
T 1ivy_A 180 LS 181 (452)
T ss_dssp CS
T ss_pred cc
Confidence 63
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=8.5e-08 Score=88.11 Aligned_cols=60 Identities=15% Similarity=0.091 Sum_probs=46.9
Q ss_pred CcEEEEeecCCccCCHHHHHHHHHHhC---C--CeEEEEcCC-CccccccCH-------------------HHHHHHHHH
Q 015550 262 FLVSVIHGRHDVIAQICYARRLAEKLY---P--VARMIDLPG-GHLVSHERT-------------------EEVNQALID 316 (405)
Q Consensus 262 ~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~--~~~l~~~~g-gH~~~~e~p-------------------~~v~~~i~~ 316 (405)
.|++++||++|.++|++.++++.+.+. + +++++.+++ ||....+.. -.-...|.+
T Consensus 91 ~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~~~~i~~ 170 (318)
T 2d81_A 91 RKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALK 170 (318)
T ss_dssp CEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCHHHHHHH
T ss_pred CcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCChHHHHHHH
Confidence 699999999999999999999998773 1 578899998 997655433 133567788
Q ss_pred HHHhh
Q 015550 317 LIKAS 321 (405)
Q Consensus 317 fl~~~ 321 (405)
|+...
T Consensus 171 ff~g~ 175 (318)
T 2d81_A 171 WIYGS 175 (318)
T ss_dssp HHHSS
T ss_pred HHhcc
Confidence 88663
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.63 E-value=3.2e-06 Score=82.09 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=80.7
Q ss_pred CEEEEEEEcc-------CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC-CC
Q 015550 24 GIKIFYRTYG-------RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN-RG 95 (405)
Q Consensus 24 g~~i~y~~~G-------~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~-~G 95 (405)
+..++|.-.. ...|.+|+++|.+|++..+..+. ++....- +.|. .. ..-..--.+..+++-+|. .|
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~-e~GP~~~--~~~~-~l--~~n~~sw~~~~n~lfiDqPvG 121 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALV-ESGPFRV--NSDG-KL--YLNEGSWISKGDLLFIDQPTG 121 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHH-SSSSEEE--CTTS-CE--EECTTCGGGTSEEEEECCSTT
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHh-hcCCeEe--cCCC-ce--eecccchhhcCCeEEEecCCC
Confidence 5677775432 13578999999999988764332 1111000 0000 00 000000112578999996 69
Q ss_pred CCCCCCCCCC--------CCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhC------------
Q 015550 96 MGRSSVPVKK--------TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV------------ 148 (405)
Q Consensus 96 ~G~S~~~~~~--------~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~------------ 148 (405)
.|.|...... ...+.++.++|+..++... ...+++|.|+|+||..+..+|...
T Consensus 122 tGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~ 201 (483)
T 1ac5_A 122 TGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGD 201 (483)
T ss_dssp STTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTS
T ss_pred ccccCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCc
Confidence 9999654321 1235778888888777653 346899999999999988887531
Q ss_pred CcccceEEEeccCC
Q 015550 149 PERVLSLALLNVTG 162 (405)
Q Consensus 149 p~~v~~lvl~~~~~ 162 (405)
+-.++++++-++..
T Consensus 202 ~inLkGi~IGNg~~ 215 (483)
T 1ac5_A 202 TYDLKALLIGNGWI 215 (483)
T ss_dssp CCEEEEEEEEEECC
T ss_pred ccceeeeEecCCcc
Confidence 12467888877654
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.3e-07 Score=85.63 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=31.4
Q ss_pred ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 127 KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+++.++||||||.+|+.++.+ |+.+++++++++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 369999999999999999999 9999999999875
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.6e-07 Score=102.95 Aligned_cols=209 Identities=15% Similarity=0.104 Sum_probs=116.2
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.++++|+|+.++....|.++...|. .+.|++++.++ .+++++
T Consensus 1058 ~~~L~~l~~~~g~~~~y~~la~~L~------------------------~~~v~~l~~~~--------------~~~~~~ 1099 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGLMYQNLSSRLP------------------------SYKLCAFDFIE--------------EEDRLD 1099 (1304)
T ss_dssp CCEEECCCCTTCBGGGGHHHHTTCC------------------------SCEEEECBCCC--------------STTHHH
T ss_pred CCcceeecccccchHHHHHHHhccc------------------------ccceEeecccC--------------HHHHHH
Confidence 4569999999998888887776653 57888888632 233555
Q ss_pred HHHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhh
Q 015550 116 DVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (405)
Q Consensus 116 dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (405)
...+.+..+.. .++.++|||+||.+|..+|.+.. ..+..++++++....... .............+.......
T Consensus 1100 ~~~~~i~~~~~~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~- 1176 (1304)
T 2vsq_A 1100 RYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVS--DLDGRTVESDVEALMNVNRDN- 1176 (1304)
T ss_dssp HHHHHHHHHCCSSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-------CHHHHHHHHHTTCC---
T ss_pred HHHHHHHHhCCCCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCccccccc--ccccccchhhHHHHHHhhhhh-
Confidence 56666666653 58999999999999999997643 458899999876321110 000000000000000000000
Q ss_pred hccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecC
Q 015550 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRH 271 (405)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~ 271 (405)
.......+ .......+.. .+... .... .-..+++|++++.|+.
T Consensus 1177 ----------~~~~~~~l-----~~~~l~~~~~-------------------~~~~~--~~~~-~~~~~~~pv~l~~~~~ 1219 (1304)
T 2vsq_A 1177 ----------EALNSEAV-----KHGLKQKTHA-------------------FYSYY--VNLI-STGQVKADIDLLTSGA 1219 (1304)
T ss_dssp ---------------CTT-----TGGGHHHHHH-------------------HHHHH--HC------CBSSEEEEEECSS
T ss_pred ----------hhhcchhc-----chHHHHHHHH-------------------HHHHH--HHHh-ccCCcCCCEEEEEecC
Confidence 00000000 0000000000 00000 0000 0146779999999998
Q ss_pred CccCCHHHHHHHHHHhCCCeEEEEcCCCccccccC--HHHHHHHHHHHHHhhcC
Q 015550 272 DVIAQICYARRLAEKLYPVARMIDLPGGHLVSHER--TEEVNQALIDLIKASEK 323 (405)
Q Consensus 272 D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~--p~~v~~~i~~fl~~~~~ 323 (405)
|.. +.+....|.+......+++.++|+|+.+++. .+++++.|.++|.+...
T Consensus 1220 ~~~-~~~~~~~W~~~~~~~~~~~~v~G~H~~ml~~~~~~~~a~~l~~~L~~~~~ 1272 (1304)
T 2vsq_A 1220 DFD-IPEWLASWEEATTGVYRMKRGFGTHAEMLQGETLDRNAEILLEFLNTQTV 1272 (1304)
T ss_dssp CCC-CCSSEECSSTTBSSCCCEEECSSCTTGGGSHHHHHHHHHHHHHHHHCCCC
T ss_pred ccc-cccchhhHHHHhCCCeEEEEeCCCHHHHCCCHHHHHHHHHHHHHHhccch
Confidence 873 2222233444333567899999999888764 45899999999987653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=5.1e-06 Score=77.58 Aligned_cols=39 Identities=26% Similarity=0.138 Sum_probs=33.2
Q ss_pred CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 126 WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 126 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
.++|.++|||+||..|+.+++..+ ||+.+|...+...+.
T Consensus 218 ~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G~ 256 (433)
T 4g4g_A 218 TKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGGA 256 (433)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTTT
T ss_pred hhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCch
Confidence 358999999999999999999875 899999988764443
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-05 Score=73.75 Aligned_cols=55 Identities=22% Similarity=0.123 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHh------CC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCC
Q 015550 110 TKIMAKDVIALMDHL------GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l------~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (405)
+..++=++..+++.| .+ ++|.++|||+||..|+.+|+..+ ||+.+|...+...+.
T Consensus 160 l~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G~ 222 (375)
T 3pic_A 160 MTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGGS 222 (375)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTT
T ss_pred HHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCch
Confidence 344444566666654 22 58999999999999999999885 899999988664443
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=6.9e-05 Score=71.20 Aligned_cols=138 Identities=16% Similarity=0.116 Sum_probs=82.0
Q ss_pred ccccc--CCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 18 AALND--NGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 18 ~~~~~--~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.++++ .+.+++|.-... .+|.+|+++|.+|++..+..+. ++.... ++.+. ..... ..---+-.+++-
T Consensus 19 GYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~~-e~GP~~--~~~~~-~l~~n--~~sW~~~an~lf 92 (421)
T 1cpy_A 19 GYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFF-ALGPSS--IGPDL-KPIGN--PYSWNSNATVIF 92 (421)
T ss_dssp EEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHTT-TTSSEE--EETTT-EEEEC--TTCGGGGSEEEC
T ss_pred EEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHHH-ccCCcE--ECCCC-ceeEC--CcccccccCEEE
Confidence 33444 368888854432 4578999999999887763322 111100 00000 00000 000012567999
Q ss_pred ecC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CC--ccEEEEEEChhHHHHHHHHHhCC------cccce
Q 015550 91 FDN-RGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-------GW--KQAHVFGHSMGAMIACKLAAMVP------ERVLS 154 (405)
Q Consensus 91 ~D~-~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-------~~--~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~ 154 (405)
+|. .|.|.|..... ...+.++.++|+.+++... .. .+++|.|.|+||..+..+|...- -.+++
T Consensus 93 iDqPvGtGfSy~~~~-~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkG 171 (421)
T 1cpy_A 93 LDQPVNVGFSYSGSS-GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTS 171 (421)
T ss_dssp CCCSTTSTTCEESSC-CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCE
T ss_pred ecCCCcccccCCCCC-CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceee
Confidence 994 59999854432 1345667778877777643 33 58999999999999888876421 24788
Q ss_pred EEEeccCC
Q 015550 155 LALLNVTG 162 (405)
Q Consensus 155 lvl~~~~~ 162 (405)
+++-++..
T Consensus 172 i~IGNg~~ 179 (421)
T 1cpy_A 172 VLIGNGLT 179 (421)
T ss_dssp EEEESCCC
T ss_pred EEecCccc
Confidence 88777653
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=2.2e-05 Score=71.39 Aligned_cols=50 Identities=18% Similarity=0.104 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHH-hC---------CccEEEEEEChhHHHHHHHHHhC--CcccceEEEeccC
Q 015550 112 IMAKDVIALMDH-LG---------WKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVT 161 (405)
Q Consensus 112 ~~~~dl~~~l~~-l~---------~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~ 161 (405)
.+++++..+++. +. .++..|.||||||.-|+.+|.++ |++..++...++.
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~ 189 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccc
Confidence 356778777764 22 23689999999999999999986 5667777776655
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.31 E-value=1.5e-06 Score=85.12 Aligned_cols=119 Identities=15% Similarity=0.128 Sum_probs=75.4
Q ss_pred CCEEEEEEEcc---CCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC--
Q 015550 23 NGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-- 94 (405)
Q Consensus 23 ~g~~i~y~~~G---~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-- 94 (405)
|...+....-. ...|+||++||.+ ++...+......|+.. .++.|+.+|+|
T Consensus 83 dcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~---------------------~~~vvv~~nYRlg 141 (498)
T 2ogt_A 83 DGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKH---------------------GDVVVVTINYRMN 141 (498)
T ss_dssp CCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHH---------------------HTCEEEEECCCCH
T ss_pred CCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhC---------------------CCEEEEeCCCcCc
Confidence 44445444322 2347899999987 5554433334556541 14999999999
Q ss_pred --CCCCCCCCCC-----CCCCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhC--CcccceEEEecc
Q 015550 95 --GMGRSSVPVK-----KTEYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNV 160 (405)
Q Consensus 95 --G~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~ 160 (405)
|++.+..... ...+.+.|....+.-+.+. ++ .++|.|+|+|.||.++..++... +..++++|+.++
T Consensus 142 ~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg 221 (498)
T 2ogt_A 142 VFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSG 221 (498)
T ss_dssp HHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESC
T ss_pred hhhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccC
Confidence 8887754221 0112244444444333333 23 35799999999999998888754 356999999998
Q ss_pred CC
Q 015550 161 TG 162 (405)
Q Consensus 161 ~~ 162 (405)
..
T Consensus 222 ~~ 223 (498)
T 2ogt_A 222 SG 223 (498)
T ss_dssp CT
T ss_pred Cc
Confidence 64
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.2e-06 Score=85.61 Aligned_cols=106 Identities=20% Similarity=0.116 Sum_probs=66.9
Q ss_pred CCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CCCCCCCCC--CCC
Q 015550 36 PTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GMGRSSVPV--KKT 106 (405)
Q Consensus 36 ~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~G~S~~~~--~~~ 106 (405)
.|+||++||.+ ++...+......|+.. .++.|+.+|+| |++.+.... ...
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~~~~~~la~~---------------------g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~ 155 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQ---------------------GEVIVVTLNYRLGPFGFLHLSSFDEAYSD 155 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHH---------------------HTCEEEEECCCCHHHHSCCCTTTCTTSCS
T ss_pred CCEEEEECCCccccCCCCCcccCHHHHHhc---------------------CCEEEEecCccCcccccCccccccccCCC
Confidence 37899999965 4444433334555541 15999999999 666653321 111
Q ss_pred CCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhC--CcccceEEEeccCC
Q 015550 107 EYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTG 162 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 162 (405)
.+.+.+....+.-+.+. ++ .++|.|+|||+||.++..++... ++.++++|+.++..
T Consensus 156 n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 156 NLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred CcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 22344443333322222 23 34799999999999988887653 46799999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=1.3e-07 Score=108.43 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=0.0
Q ss_pred CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
..++++|+|+.+++...|.++.+.| ...|+.+..+|. + ...++++++
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l-------------------------~~~v~~lq~pg~-----~---~~~~i~~la 2287 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKL-------------------------SIPTYGLQCTGA-----A---PLDSIQSLA 2287 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhh-------------------------CCcEEEEecCCC-----C---CCCCHHHHH
Confidence 3457999999999998888877665 357888888871 1 134677888
Q ss_pred HHHHHHHHHhC-CccEEEEEEChhHHHHHHHHHhCCc---ccc---eEEEeccC
Q 015550 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPE---RVL---SLALLNVT 161 (405)
Q Consensus 115 ~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~---~lvl~~~~ 161 (405)
++..+.+..+. ..++.++||||||.+|.++|.+-.. .+. .++++++.
T Consensus 2288 ~~~~~~i~~~~p~gpy~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2288 SYYIECIRQVQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 88777777664 3589999999999999999976432 344 67777763
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.23 E-value=6.8e-06 Score=76.04 Aligned_cols=131 Identities=12% Similarity=0.034 Sum_probs=83.7
Q ss_pred HHHHHHHHHHh-CC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhh
Q 015550 114 AKDVIALMDHL-GW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (405)
Q Consensus 114 ~~dl~~~l~~l-~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (405)
.+++...++.. .. ....++||||||..++.++.++|+.+.+++.+++... ....
T Consensus 122 ~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w-------~~~~----------------- 177 (331)
T 3gff_A 122 EKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLW-------FDSP----------------- 177 (331)
T ss_dssp HHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTT-------TTTT-----------------
T ss_pred HHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhc-------CChH-----------------
Confidence 34555555543 22 2347899999999999999999999999999997620 0000
Q ss_pred hccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecC
Q 015550 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRH 271 (405)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~ 271 (405)
.. .+..... .........|+++.+|+.
T Consensus 178 -----------~~--------------~~~~~~~----------------------------~~~~~~~~~~l~l~~G~~ 204 (331)
T 3gff_A 178 -----------HY--------------LTLLEER----------------------------VVKGDFKQKQLFMAIANN 204 (331)
T ss_dssp -----------HH--------------HHHHHHH----------------------------HHHCCCSSEEEEEEECCC
T ss_pred -----------HH--------------HHHHHHH----------------------------hhcccCCCCeEEEEeCCC
Confidence 00 0000000 000011347999999999
Q ss_pred Cc-------cCCHHHHHHHHHHhC----C--CeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 272 DV-------IAQICYARRLAEKLY----P--VARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 272 D~-------~~~~~~~~~l~~~l~----~--~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
|. .++...++++.+.+. + +.++.+++| +|.... +..+.+.+..++.....
T Consensus 205 d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~~~~~ 268 (331)
T 3gff_A 205 PLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLFKDFAI 268 (331)
T ss_dssp SEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHHGGGCC
T ss_pred CCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHHhhcCC
Confidence 98 355666677776652 1 467888998 787655 66777888777776654
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-05 Score=70.02 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=84.2
Q ss_pred CCEEEEEEEccC-----CCCeEEEEecCCCCCCch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC-CC
Q 015550 23 NGIKIFYRTYGR-----GPTKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN-RG 95 (405)
Q Consensus 23 ~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~-~G 95 (405)
.+.+++|.-... .+|.+|+++|.+|++..+ ..+. ++.... ++.|..... .-..--.+-.+++-+|. .|
T Consensus 30 ~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~-E~GP~~--v~~~~~~l~--~N~~sW~~~anvlfiDqPvG 104 (255)
T 1whs_A 30 AGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASE-ELGAFR--VKPRGAGLV--LNEYRWNKVANVLFLDSPAG 104 (255)
T ss_dssp TTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHH-TSSSEE--ECGGGCCEE--ECTTCGGGTSEEEEECCSTT
T ss_pred CCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHh-ccCCeE--ecCCCCeee--eCcccccccCCEEEEecCCC
Confidence 477888865542 468899999999998886 4332 111000 000000000 00000012578999996 59
Q ss_pred CCCCCCCCCCC--CCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhC------CcccceEEEecc
Q 015550 96 MGRSSVPVKKT--EYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNV 160 (405)
Q Consensus 96 ~G~S~~~~~~~--~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~ 160 (405)
.|.|....... ..+.++.++|+.++++.+ ...+++|.|+|+||..+..+|... .-.++++++.++
T Consensus 105 tGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~ 184 (255)
T 1whs_A 105 VGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNG 184 (255)
T ss_dssp STTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEE
T ss_pred CccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCC
Confidence 99995443211 357788888888877643 346899999999999988887642 235789999997
Q ss_pred C
Q 015550 161 T 161 (405)
Q Consensus 161 ~ 161 (405)
.
T Consensus 185 ~ 185 (255)
T 1whs_A 185 L 185 (255)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.8e-05 Score=78.40 Aligned_cols=105 Identities=15% Similarity=0.056 Sum_probs=65.8
Q ss_pred CCeEEEEecCCC---CCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC----CCCCCCCCCCCCC
Q 015550 36 PTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG----MGRSSVPVKKTEY 108 (405)
Q Consensus 36 ~p~vvllHG~~~---~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G----~G~S~~~~~~~~~ 108 (405)
.|+||++||.+. +..........|.+ .|+.|+.+|+|. +..+.........
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~----------------------~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~ 172 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVS----------------------KDVIVITFNYRLNVYGFLSLNSTSVPGNA 172 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGG----------------------GSCEEEEECCCCHHHHHCCCSSSSCCSCH
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHh----------------------CCeEEEEeCCcCCccccccCcccCCCCch
Confidence 478999999652 22221222334443 599999999993 3333221111233
Q ss_pred CHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccCC
Q 015550 109 TTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (405)
Q Consensus 109 ~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 162 (405)
.+.|....+.-+.+. ++ .++|.|+|+|.||.++..++.. .++.++++|++++..
T Consensus 173 gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 173 GLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 445554444333333 33 3579999999999999988765 356799999999864
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=2.8e-05 Score=76.90 Aligned_cols=78 Identities=13% Similarity=0.101 Sum_probs=52.6
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC--ccEEEEEEChhHHHHHHHHHh--CCcccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAM--VPERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~ 153 (405)
|+.|+.+|+| |++.+........+.+.|....+.-+.+. ++. ++|.|+|||.||.++..++.. .++.++
T Consensus 144 g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~ 223 (542)
T 2h7c_A 144 NVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFH 223 (542)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCS
T ss_pred CEEEEecCCCCccccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHH
Confidence 8999999999 56554322221233344444333333332 333 589999999999999988876 356899
Q ss_pred eEEEeccCC
Q 015550 154 SLALLNVTG 162 (405)
Q Consensus 154 ~lvl~~~~~ 162 (405)
++|++++..
T Consensus 224 ~ai~~Sg~~ 232 (542)
T 2h7c_A 224 RAISESGVA 232 (542)
T ss_dssp EEEEESCCT
T ss_pred HHhhhcCCc
Confidence 999998764
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.90 E-value=1.6e-05 Score=78.68 Aligned_cols=105 Identities=15% Similarity=0.009 Sum_probs=65.0
Q ss_pred CeEEEEecCCC---CCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CCCCCC-CCCCCCCC
Q 015550 37 TKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GMGRSS-VPVKKTEY 108 (405)
Q Consensus 37 p~vvllHG~~~---~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~G~S~-~~~~~~~~ 108 (405)
|+||++||.+. +..........|+.. .|+.|+.+|+| |++.+. .+.....+
T Consensus 113 Pviv~iHGGg~~~g~~~~~~~~~~~la~~---------------------~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~ 171 (543)
T 2ha2_A 113 PVLIWIYGGGFYSGAASLDVYDGRFLAQV---------------------EGAVLVSMNYRVGTFGFLALPGSREAPGNV 171 (543)
T ss_dssp EEEEEECCSTTTCCCTTSGGGCTHHHHHH---------------------HCCEEEEECCCCHHHHHCCCTTCSSCCSCH
T ss_pred eEEEEECCCccccCCCCCCcCChHHHHhc---------------------CCEEEEEecccccccccccCCCCCCCCCcc
Confidence 78999999763 332222223344421 28999999999 455542 11111223
Q ss_pred CHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhC--CcccceEEEeccCC
Q 015550 109 TTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTG 162 (405)
Q Consensus 109 ~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 162 (405)
.+.|....+.-+.+. +| .++|.|+|+|.||..+..++... ++.++++|+.++..
T Consensus 172 gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 172 GLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 344444433333333 33 35899999999999988877653 45799999999864
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.86 E-value=2.6e-05 Score=76.96 Aligned_cols=106 Identities=20% Similarity=0.078 Sum_probs=65.9
Q ss_pred CCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CCCCCC-CCCCCCC
Q 015550 36 PTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GMGRSS-VPVKKTE 107 (405)
Q Consensus 36 ~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~G~S~-~~~~~~~ 107 (405)
.|+||++||.+ ++..........|+.. .|+.|+.+++| |++.+. .+.....
T Consensus 107 ~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~---------------------~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n 165 (529)
T 1p0i_A 107 ATVLIWIYGGGFQTGTSSLHVYDGKFLARV---------------------ERVIVVSMNYRVGALGFLALPGNPEAPGN 165 (529)
T ss_dssp EEEEEEECCSTTTSCCTTCGGGCTHHHHHH---------------------HCCEEEEECCCCHHHHHCCCTTCTTSCSC
T ss_pred CeEEEEECCCccccCCCCccccChHHHhcc---------------------CCeEEEEecccccccccccCCCCCCCcCc
Confidence 47899999975 2333221223444431 28999999999 555542 1111122
Q ss_pred CCHHHHHHHHHHHHHH---hCC--ccEEEEEEChhHHHHHHHHHhC--CcccceEEEeccCC
Q 015550 108 YTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTG 162 (405)
Q Consensus 108 ~~~~~~~~dl~~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 162 (405)
+.+.|....+.-+.+. +|. ++|.|+|+|.||..+..++... +..++++|++++..
T Consensus 166 ~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 166 MGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred ccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 3344444443333333 343 4799999999999998888764 35799999999864
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.72 E-value=4.7e-05 Score=75.22 Aligned_cols=119 Identities=13% Similarity=0.020 Sum_probs=71.5
Q ss_pred cCCEEEEEEEcc---CCCCeEEEEecCCC---CCCchhhhHhhhc-CCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 22 DNGIKIFYRTYG---RGPTKVILITGLAG---THDAWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 22 ~~g~~i~y~~~G---~~~p~vvllHG~~~---~~~~~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
-|...+....-. ...|+||++||.+. +..........|+ . .|+.|+.+++|
T Consensus 92 edcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~----------------------~~~vvv~~nYR 149 (537)
T 1ea5_A 92 EDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYT----------------------EEVVLVSLSYR 149 (537)
T ss_dssp SCCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHH----------------------HTCEEEECCCC
T ss_pred CcCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCccChHHHHhc----------------------CCEEEEEeccC
Confidence 345555544332 23478999999653 2222112234454 3 39999999999
Q ss_pred ----CCCCCC-CCCCCCCCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccCC
Q 015550 95 ----GMGRSS-VPVKKTEYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (405)
Q Consensus 95 ----G~G~S~-~~~~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 162 (405)
|+..+. .+.....+.+.|....+.-+.+. +| .++|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 150 lg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 150 VGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp CHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred ccccccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 555441 11111223345554444333333 33 3589999999999999888765 235799999999864
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00022 Score=70.18 Aligned_cols=79 Identities=14% Similarity=-0.010 Sum_probs=49.8
Q ss_pred CCeEEEEecCC----CCCCCCCCC--CCCCCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhC----
Q 015550 84 AGIEVCAFDNR----GMGRSSVPV--KKTEYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMV---- 148 (405)
Q Consensus 84 ~g~~Vi~~D~~----G~G~S~~~~--~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~---- 148 (405)
.|+.|+.+|+| |++.+.... ......+.|....+.-+.+. +| .++|.|+|+|.||..+..++...
T Consensus 132 ~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~ 211 (522)
T 1ukc_A 132 DVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKD 211 (522)
T ss_dssp SCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCC
T ss_pred CcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccc
Confidence 39999999999 555543210 00122344444433333332 33 35899999999998776665543
Q ss_pred CcccceEEEeccCC
Q 015550 149 PERVLSLALLNVTG 162 (405)
Q Consensus 149 p~~v~~lvl~~~~~ 162 (405)
+..++++|+.++..
T Consensus 212 ~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 212 EGLFIGAIVESSFW 225 (522)
T ss_dssp CSSCSEEEEESCCC
T ss_pred cccchhhhhcCCCc
Confidence 56789999998764
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0012 Score=63.91 Aligned_cols=80 Identities=21% Similarity=0.149 Sum_probs=65.7
Q ss_pred CeEEEEecCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcc
Q 015550 85 GIEVCAFDNRGMGRSSVPV-------KKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPER 151 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~ 151 (405)
|--++.+++|-+|.|.+-. .-...+.++..+|+..+++++. ..|++++|-|+||++|..+-.++|+.
T Consensus 73 ~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l 152 (472)
T 4ebb_A 73 GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL 152 (472)
T ss_dssp TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTT
T ss_pred CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCe
Confidence 6789999999999996521 1124688999999999998762 24899999999999999999999999
Q ss_pred cceEEEeccCCCC
Q 015550 152 VLSLALLNVTGGG 164 (405)
Q Consensus 152 v~~lvl~~~~~~~ 164 (405)
|.+.+.-+++...
T Consensus 153 v~ga~ASSApv~a 165 (472)
T 4ebb_A 153 VAGALAASAPVLA 165 (472)
T ss_dssp CSEEEEETCCTTG
T ss_pred EEEEEecccceEE
Confidence 9999988876543
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00024 Score=70.93 Aligned_cols=78 Identities=18% Similarity=0.057 Sum_probs=48.5
Q ss_pred CeEEEEecCC----CCCCCCC-------CCCCCCCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhC
Q 015550 85 GIEVCAFDNR----GMGRSSV-------PVKKTEYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~-------~~~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
|+-|+.+|+| |+..... ......+.+.|....+.-+.+. +| .++|.|+|+|.||..+..++...
T Consensus 172 ~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~ 251 (585)
T 1dx4_A 172 NVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP 251 (585)
T ss_dssp TCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT
T ss_pred CEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCC
Confidence 8999999999 5543311 0111122344443333333232 33 35899999999999888777653
Q ss_pred --CcccceEEEeccCC
Q 015550 149 --PERVLSLALLNVTG 162 (405)
Q Consensus 149 --p~~v~~lvl~~~~~ 162 (405)
...+++.|+.++..
T Consensus 252 ~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 252 VTRGLVKRGMMQSGTM 267 (585)
T ss_dssp TTTTSCCEEEEESCCT
T ss_pred cccchhHhhhhhcccc
Confidence 35689999998764
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0039 Score=55.99 Aligned_cols=134 Identities=16% Similarity=0.082 Sum_probs=84.5
Q ss_pred CCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC-CC
Q 015550 23 NGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-GM 96 (405)
Q Consensus 23 ~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-G~ 96 (405)
++.+++|.-... .+|.||.+.|.+|++..+..+.+ +.... .+.|....... ..--.+-.+++-+|.| |.
T Consensus 32 ~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E-~GP~~--~~~~~~~l~~N--~~sW~~~an~lfiD~PvGt 106 (300)
T 4az3_A 32 GSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTE-HGPFL--VQPDGVTLEYN--PYSWNLIANVLYLESPAGV 106 (300)
T ss_dssp TTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHT-TSSEE--ECTTSSCEEEC--TTCGGGSSEEEEECCSTTS
T ss_pred CCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhc-CCCce--ecCCCcccccc--CccHHhhhcchhhcCCCcc
Confidence 467888866542 35789999999999887754432 11100 00000000000 0000124689999977 89
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhCC----cccceEEEeccC
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVT 161 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~ 161 (405)
|.|.........+..+.++|+..++... .-.+++|.|-|+||..+-.+|...- -.++++++-++.
T Consensus 107 GfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 107 GFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp TTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred cccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 9886554433456778888888777643 3468999999999999888886532 247888888865
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00083 Score=66.77 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=50.8
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC--ccEEEEEEChhHHHHHHHHHh--CCcccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAM--VPERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~ 153 (405)
++-|+.+++| |+..+........+.+.|....+.-+.++ +|. ++|.|+|+|.||..+..++.. ....++
T Consensus 135 ~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~ 214 (579)
T 2bce_A 135 NVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIK 214 (579)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCS
T ss_pred CEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHH
Confidence 7999999999 55544321111122355554444433333 343 579999999999999887765 345789
Q ss_pred eEEEeccCC
Q 015550 154 SLALLNVTG 162 (405)
Q Consensus 154 ~lvl~~~~~ 162 (405)
+.|+.++..
T Consensus 215 ~ai~~Sg~~ 223 (579)
T 2bce_A 215 RAISQSGVG 223 (579)
T ss_dssp EEEEESCCT
T ss_pred HHHHhcCCc
Confidence 999988653
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00036 Score=69.45 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=63.9
Q ss_pred CCeEEEEecCCCCC---CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC----CCCCCCCCCCCCCC
Q 015550 36 PTKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GMGRSSVPVKKTEY 108 (405)
Q Consensus 36 ~p~vvllHG~~~~~---~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~----G~G~S~~~~~~~~~ 108 (405)
.|+||++||.+... ..|.. ..|+.. .++.|+.+|+| |+..+........+
T Consensus 131 ~Pv~v~iHGGg~~~g~~~~~~~--~~la~~---------------------~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~ 187 (574)
T 3bix_A 131 KPVMVYIHGGSYMEGTGNLYDG--SVLASY---------------------GNVIVITVNYRLGVLGFLSTGDQAAKGNY 187 (574)
T ss_dssp EEEEEECCCSSSSSCCGGGSCC--HHHHHH---------------------HTCEEEEECCCCHHHHHCCCSSSSCCCCH
T ss_pred CcEEEEECCCcccCCCCCccCc--hhhhcc---------------------CCEEEEEeCCcCcccccCcCCCCCCCCcc
Confidence 47899999976433 22332 234331 26999999999 44443221111233
Q ss_pred CHHHHHHHHHHHHHH---hCC--ccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccC
Q 015550 109 TTKIMAKDVIALMDH---LGW--KQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVT 161 (405)
Q Consensus 109 ~~~~~~~dl~~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 161 (405)
.+.|....+.-+.+. +|. ++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 188 gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 188 GLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred cHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 455555444444443 343 57999999999999988887654 347888888764
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00079 Score=54.51 Aligned_cols=63 Identities=19% Similarity=0.284 Sum_probs=55.2
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHhC-----------------------CCeEEEEcCC-CccccccCHHHHHHHH
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PVARMIDLPG-GHLVSHERTEEVNQAL 314 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----------------------~~~~l~~~~g-gH~~~~e~p~~v~~~i 314 (405)
.-+++|||.+|+.|.+++.--.+.+.+.+. .+.+++.+.+ ||+++.++|++..+.+
T Consensus 62 ~~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~ 141 (153)
T 1whs_B 62 AAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLF 141 (153)
T ss_dssp HTTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHH
T ss_pred hcCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHH
Confidence 347899999999999999999999988873 2567788888 9999999999999999
Q ss_pred HHHHHhh
Q 015550 315 IDLIKAS 321 (405)
Q Consensus 315 ~~fl~~~ 321 (405)
..||...
T Consensus 142 ~~fl~~~ 148 (153)
T 1whs_B 142 QYFLQGK 148 (153)
T ss_dssp HHHHHTC
T ss_pred HHHHCCC
Confidence 9999864
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0016 Score=64.21 Aligned_cols=79 Identities=14% Similarity=-0.022 Sum_probs=48.3
Q ss_pred CCeEEEEecCCC----CCCCCCC--CCCCCCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhC----
Q 015550 84 AGIEVCAFDNRG----MGRSSVP--VKKTEYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMV---- 148 (405)
Q Consensus 84 ~g~~Vi~~D~~G----~G~S~~~--~~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~---- 148 (405)
.++.|+.+|+|. +..+... .......+.|....+.-+.++ +| .++|.|+|+|.||..+..++...
T Consensus 147 ~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~ 226 (534)
T 1llf_A 147 KPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDN 226 (534)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCC
T ss_pred CCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccc
Confidence 389999999993 2221100 000122344444443333333 33 35899999999998777766553
Q ss_pred ----CcccceEEEeccCC
Q 015550 149 ----PERVLSLALLNVTG 162 (405)
Q Consensus 149 ----p~~v~~lvl~~~~~ 162 (405)
+..++++|+.++..
T Consensus 227 ~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 227 TYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp EETTEESCSEEEEESCCS
T ss_pred cccccchhHhHhhhccCc
Confidence 45789999998754
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00076 Score=60.22 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCC
Q 015550 110 TKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
++.+.+++.++++.+ ...+++++||||||.+|..++....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHH
Confidence 445566666666654 3358999999999999999998864
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00054 Score=67.71 Aligned_cols=78 Identities=17% Similarity=0.097 Sum_probs=49.1
Q ss_pred CeEEEEecCCC----CCCCCCC--CCCCCCCHHHHHHHHHHHHHH---hC--CccEEEEEEChhHHHHHHHHHhC-----
Q 015550 85 GIEVCAFDNRG----MGRSSVP--VKKTEYTTKIMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMV----- 148 (405)
Q Consensus 85 g~~Vi~~D~~G----~G~S~~~--~~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~----- 148 (405)
|+.|+.+|+|. +..+... .......+.|....+.-+.+. ++ .++|.|+|+|.||.++..++...
T Consensus 156 ~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~ 235 (544)
T 1thg_A 156 PVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNT 235 (544)
T ss_dssp CCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCE
T ss_pred CEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCcccc
Confidence 89999999994 2221100 001123344444444333333 33 35799999999999988777653
Q ss_pred ---CcccceEEEeccCC
Q 015550 149 ---PERVLSLALLNVTG 162 (405)
Q Consensus 149 ---p~~v~~lvl~~~~~ 162 (405)
+..++++|+.++..
T Consensus 236 ~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 236 YNGKKLFHSAILQSGGP 252 (544)
T ss_dssp ETTEESCSEEEEESCCC
T ss_pred ccccccccceEEecccc
Confidence 45789999999754
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0017 Score=58.01 Aligned_cols=63 Identities=14% Similarity=0.071 Sum_probs=37.5
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhC
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+..+...++||......... ....+..+.+++.+.++.+ ...+++++||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~vh~g-f~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKG-FLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHH-HHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 45666677777421111110 1113444555555555443 234599999999999999998765
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0081 Score=53.80 Aligned_cols=51 Identities=24% Similarity=0.289 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcc-c--ceEEEeccC
Q 015550 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPER-V--LSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v--~~lvl~~~~ 161 (405)
..+.+++.+.++.+ ...++++.||||||.+|..+|...... + -.++..+++
T Consensus 117 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~g~~~v~~~tfg~P 174 (279)
T 1tia_A 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYASP 174 (279)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhcCCCceeEEEeCCC
Confidence 34445555555443 335899999999999999998875422 1 234555543
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.011 Score=52.21 Aligned_cols=132 Identities=16% Similarity=0.179 Sum_probs=74.0
Q ss_pred CCEEEEEEEccC------CCCeEEEEecCCCCCCch-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC-C
Q 015550 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN-R 94 (405)
Q Consensus 23 ~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~-~ 94 (405)
.+..++|.-... .+|.+|.++|.+|++..+ ..+.+ +....- +.|...... -..--.+-.+++-+|. .
T Consensus 35 ~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E-~GP~~v--~~~~~~l~~--N~~SW~~~anllfiDqPv 109 (270)
T 1gxs_A 35 NGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQE-LGAFRV--HTNGESLLL--NEYAWNKAANILFAESPA 109 (270)
T ss_dssp TTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHT-TSSEEE--CTTSSCEEE--CTTCGGGTSEEEEECCST
T ss_pred CCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHh-ccCcee--cCCCCccee--CccchhccccEEEEeccc
Confidence 467888854432 357899999999998885 43331 111000 000000000 0000012578999995 6
Q ss_pred CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHh---C-----CcccceEEEe
Q 015550 95 GMGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALL 158 (405)
Q Consensus 95 G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~ 158 (405)
|.|.|...... ...+-++.++|+.+++... ...+++|.|+| |-++. .+|.. . .-.++++++.
T Consensus 110 GtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP-~la~~i~~~n~~~~~inLkGi~ig 187 (270)
T 1gxs_A 110 GVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIP-QLSQVVYRNRNNSPFINFQGLLVS 187 (270)
T ss_dssp TSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHH-HHHHHHHHTTTTCTTCEEEEEEEE
T ss_pred cccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchH-HHHHHHHhccccccceeeeeEEEe
Confidence 99999543321 1234456677777666543 44589999999 65443 33322 1 1247899999
Q ss_pred ccC
Q 015550 159 NVT 161 (405)
Q Consensus 159 ~~~ 161 (405)
++.
T Consensus 188 n~~ 190 (270)
T 1gxs_A 188 SGL 190 (270)
T ss_dssp SCC
T ss_pred CCc
Confidence 876
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0087 Score=48.41 Aligned_cols=66 Identities=12% Similarity=0.288 Sum_probs=53.2
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC----------------------------CCeEEEEcCC-Ccccccc
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY----------------------------PVARMIDLPG-GHLVSHE 305 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~----------------------------~~~~l~~~~g-gH~~~~e 305 (405)
+.+-.-+++|||.+|+.|.+++.--.+.+.+.+. .+.+++.+.+ ||++..+
T Consensus 57 ~~Ll~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~d 136 (155)
T 4az3_B 57 KLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTD 136 (155)
T ss_dssp HHHHTCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHH
T ss_pred HHHHHcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhh
Confidence 3444457899999999999999988888887762 1123556677 9999999
Q ss_pred CHHHHHHHHHHHHHh
Q 015550 306 RTEEVNQALIDLIKA 320 (405)
Q Consensus 306 ~p~~v~~~i~~fl~~ 320 (405)
+|+...+.+..||..
T Consensus 137 qP~~al~m~~~fl~g 151 (155)
T 4az3_B 137 KPLAAFTMFSRFLNK 151 (155)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHcC
Confidence 999999999999965
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.02 Score=49.99 Aligned_cols=96 Identities=7% Similarity=0.048 Sum_probs=60.1
Q ss_pred CCCeEEEEecCCCCCC----chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe-cCCCCCCCCCCCCCCCC-
Q 015550 35 GPTKVILITGLAGTHD----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF-DNRGMGRSSVPVKKTEY- 108 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~----~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~-D~~G~G~S~~~~~~~~~- 108 (405)
.+|+|++.+|.+.... .-..+.+.|.. .+.+-.+ ++|-.. ..|
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~-----------------------~~~~q~Vg~YpA~~--------~~y~ 50 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLD-----------------------IYRWQPIGNYPAAA--------FPMW 50 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTT-----------------------TSEEEECCSCCCCS--------SSCH
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHH-----------------------hcCCCccccccCcc--------cCcc
Confidence 3678999999876421 13445555543 4444444 344221 122
Q ss_pred -CHHHHHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHh-----------CCcccceEEEeccC
Q 015550 109 -TTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAM-----------VPERVLSLALLNVT 161 (405)
Q Consensus 109 -~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~-----------~p~~v~~lvl~~~~ 161 (405)
+..+-++++...++. -...+++|.|+|+|+.++-.++.. ..++|.++++++-+
T Consensus 51 ~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 51 PSVEKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred chHHHHHHHHHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 334455555555544 344789999999999999887755 23578899998865
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.013 Score=52.19 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhC
Q 015550 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 111 ~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
..+.+++.+.++.+ ...++++.||||||.+|..++...
T Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 117 EQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 34445555555443 446899999999999999988765
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.04 Score=44.57 Aligned_cols=63 Identities=25% Similarity=0.362 Sum_probs=52.2
Q ss_pred hcCCcEEEEeecCCccCCHHHHHHHHHHhC------------C--------------CeEEEEcCC-CccccccCHHHHH
Q 015550 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLY------------P--------------VARMIDLPG-GHLVSHERTEEVN 311 (405)
Q Consensus 259 ~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~------------~--------------~~~l~~~~g-gH~~~~e~p~~v~ 311 (405)
.-+++|||.+|+.|.+++.--.+.+.+.+. . +.+++.+.+ ||++..++|++..
T Consensus 64 ~~girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 143 (158)
T 1gxs_B 64 QAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAF 143 (158)
T ss_dssp HTTCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHH
T ss_pred HcCCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHH
Confidence 347899999999999999988888887762 1 134556777 9999999999999
Q ss_pred HHHHHHHHhh
Q 015550 312 QALIDLIKAS 321 (405)
Q Consensus 312 ~~i~~fl~~~ 321 (405)
+.+..||...
T Consensus 144 ~m~~~fl~g~ 153 (158)
T 1gxs_B 144 LLFKQFLKGE 153 (158)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 9999999864
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.044 Score=48.30 Aligned_cols=45 Identities=24% Similarity=0.305 Sum_probs=29.1
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHh----CCcccceEEEeccC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAM----VPERVLSLALLNVT 161 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~ 161 (405)
+..+++.....++++.|||+||.+|..+|.. .|...-.++..+++
T Consensus 114 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~P 162 (258)
T 3g7n_A 114 VKALIAKYPDYTLEAVGHSLGGALTSIAHVALAQNFPDKSLVSNALNAF 162 (258)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSCEEEEEESCC
T ss_pred HHHHHHhCCCCeEEEeccCHHHHHHHHHHHHHHHhCCCCceeEEEecCC
Confidence 3344444445689999999999999988765 44332344555543
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.047 Score=48.73 Aligned_cols=46 Identities=22% Similarity=0.229 Sum_probs=31.9
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHh----CCcccceEEEeccC
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAM----VPERVLSLALLNVT 161 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~ 161 (405)
.+..+++.....++++.|||+||.+|..+|.. .|.....++..+++
T Consensus 127 ~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~P 176 (279)
T 3uue_A 127 AVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCC
T ss_pred HHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 33344444455689999999999999988764 34455566666654
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.026 Score=49.87 Aligned_cols=37 Identities=30% Similarity=0.264 Sum_probs=26.8
Q ss_pred hCCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccC
Q 015550 124 LGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVT 161 (405)
Q Consensus 124 l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 161 (405)
....++++.|||+||.+|..+|.... .+|. ++..+++
T Consensus 122 ~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 122 YPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred CCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 34468999999999999998887632 3454 5555554
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=94.68 E-value=0.097 Score=43.76 Aligned_cols=77 Identities=13% Similarity=0.066 Sum_probs=48.6
Q ss_pred CeEEEEe--cCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC----cccceEEE
Q 015550 85 GIEVCAF--DNRGMGRSS-VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLAL 157 (405)
Q Consensus 85 g~~Vi~~--D~~G~G~S~-~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl 157 (405)
...|+.+ ++|-.-... .......-...++.+.+......-...+++|+|+|+|+.++-.++...| ++|.+++|
T Consensus 52 ~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvl 131 (197)
T 3qpa_A 52 GVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVL 131 (197)
T ss_dssp TEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEE
T ss_pred ceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEE
Confidence 6888888 787432110 0000000113334444444444455679999999999999988877665 68999999
Q ss_pred eccC
Q 015550 158 LNVT 161 (405)
Q Consensus 158 ~~~~ 161 (405)
++-+
T Consensus 132 fGdP 135 (197)
T 3qpa_A 132 FGYT 135 (197)
T ss_dssp ESCT
T ss_pred eeCC
Confidence 9865
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=94.64 E-value=0.048 Score=49.24 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC
Q 015550 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 115 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+.+..+++.....++++.|||+||.+|..+|...
T Consensus 142 ~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 142 PKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 3344444444556899999999999999988763
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.043 Score=49.84 Aligned_cols=23 Identities=26% Similarity=0.247 Sum_probs=19.8
Q ss_pred CCccEEEEEEChhHHHHHHHHHh
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
...++++.|||+||.+|..+|..
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHH
Confidence 44589999999999999988765
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=94.12 E-value=0.54 Score=42.13 Aligned_cols=78 Identities=18% Similarity=0.174 Sum_probs=48.5
Q ss_pred CCeEEEEecCCCCCCCCCC-CCCCCC--CHHHHHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHh--------C
Q 015550 84 AGIEVCAFDNRGMGRSSVP-VKKTEY--TTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAM--------V 148 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~-~~~~~~--~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~--------~ 148 (405)
....|+.++++-.-..... .....| +..+=++++...++. -...+++|+|+|.|+.++-.++.. .
T Consensus 83 ~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~ 162 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVD 162 (302)
T ss_dssp TTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSC
T ss_pred CcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCC
Confidence 3678889998754221000 000122 333334444444443 345799999999999998887743 3
Q ss_pred CcccceEEEeccC
Q 015550 149 PERVLSLALLNVT 161 (405)
Q Consensus 149 p~~v~~lvl~~~~ 161 (405)
+++|.+++|++-+
T Consensus 163 ~~~V~aVvLfGdP 175 (302)
T 3aja_A 163 EDLVLGVTLIADG 175 (302)
T ss_dssp GGGEEEEEEESCT
T ss_pred hHHEEEEEEEeCC
Confidence 4789999999854
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=93.63 E-value=0.13 Score=43.10 Aligned_cols=77 Identities=10% Similarity=-0.016 Sum_probs=47.8
Q ss_pred CeEEEEe--cCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC----cccceEEE
Q 015550 85 GIEVCAF--DNRGMGRSS-VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLAL 157 (405)
Q Consensus 85 g~~Vi~~--D~~G~G~S~-~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl 157 (405)
...|+.+ ++|-.-... .+.....-...++.+.+......-...+++|+|+|+|+.++-.++...| ++|.++++
T Consensus 60 ~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvl 139 (201)
T 3dcn_A 60 DVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVL 139 (201)
T ss_dssp GEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEE
T ss_pred ceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEE
Confidence 5788888 677432110 0000001123344444444444555679999999999999988776555 57999999
Q ss_pred eccC
Q 015550 158 LNVT 161 (405)
Q Consensus 158 ~~~~ 161 (405)
++-+
T Consensus 140 fGdP 143 (201)
T 3dcn_A 140 FGYT 143 (201)
T ss_dssp ETCT
T ss_pred eeCc
Confidence 9855
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=92.92 E-value=0.23 Score=41.96 Aligned_cols=75 Identities=16% Similarity=0.122 Sum_probs=46.3
Q ss_pred CeEEEEecCCCC-CCCCCCCCCCCC--CHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHh----------
Q 015550 85 GIEVCAFDNRGM-GRSSVPVKKTEY--TTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAM---------- 147 (405)
Q Consensus 85 g~~Vi~~D~~G~-G~S~~~~~~~~~--~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~---------- 147 (405)
+-.+..+++|-. |.+.... ..| +..+=++++...++.. ...+++|+|+|+|+.++-.+...
T Consensus 35 g~~~~~V~YpA~~~~~~~~~--~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~ 112 (207)
T 1g66_A 35 GSTAEAINYPACGGQSSCGG--ASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTN 112 (207)
T ss_dssp TCEEEECCCCCCSSCGGGTS--CCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCceEEeeccccccccccCC--cchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhccccccccccc
Confidence 346788888854 2211101 122 2334445555555443 45689999999999999887641
Q ss_pred ----CC----cccceEEEeccC
Q 015550 148 ----VP----ERVLSLALLNVT 161 (405)
Q Consensus 148 ----~p----~~v~~lvl~~~~ 161 (405)
.| ++|.++++++-+
T Consensus 113 ~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 113 TAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCT
T ss_pred CCCCCChhhhccEEEEEEEcCC
Confidence 22 568888888854
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=92.40 E-value=0.3 Score=41.29 Aligned_cols=75 Identities=17% Similarity=0.105 Sum_probs=46.3
Q ss_pred CeEEEEecCCCC-CCCCCCCCCCCC--CHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHh----------
Q 015550 85 GIEVCAFDNRGM-GRSSVPVKKTEY--TTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAM---------- 147 (405)
Q Consensus 85 g~~Vi~~D~~G~-G~S~~~~~~~~~--~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~---------- 147 (405)
|-.+..+++|-. |.+.... ..| +..+=++++...++.. ...+++|+|+|+|+.++-.++..
T Consensus 35 g~~~~~V~YpA~~~~~~~~~--~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~ 112 (207)
T 1qoz_A 35 GTTSEAIVYPACGGQASCGG--ISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITN 112 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCceEEeeccccccccccCC--ccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccC
Confidence 456888888864 2221101 122 2333444555444443 45689999999999999887741
Q ss_pred ----CC----cccceEEEeccC
Q 015550 148 ----VP----ERVLSLALLNVT 161 (405)
Q Consensus 148 ----~p----~~v~~lvl~~~~ 161 (405)
.| ++|.++++++-+
T Consensus 113 ~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1qoz_A 113 TAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCT
T ss_pred CCCCCChHHhccEEEEEEEcCC
Confidence 22 468888888854
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=92.38 E-value=0.26 Score=40.76 Aligned_cols=74 Identities=12% Similarity=0.041 Sum_probs=47.0
Q ss_pred CeEEEEec--CCCCCCCCCCCCCCCCCHHHHHHHHH----HHHHHhCCccEEEEEEChhHHHHHHHHHhCC----cccce
Q 015550 85 GIEVCAFD--NRGMGRSSVPVKKTEYTTKIMAKDVI----ALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLS 154 (405)
Q Consensus 85 g~~Vi~~D--~~G~G~S~~~~~~~~~~~~~~~~dl~----~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~ 154 (405)
...|+.++ +|-.-...... .-+...-++++. .....-...+++|+|+|+|+.++-.++...| ++|.+
T Consensus 48 ~v~v~~V~~~YpA~~~~~~~~---~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~a 124 (187)
T 3qpd_A 48 DVACQGVGPRYTADLPSNALP---EGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKG 124 (187)
T ss_dssp CEEEEECCSSCCCCGGGGGST---TSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEE
T ss_pred CceEEeeCCcccCcCcccccc---ccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEE
Confidence 67899998 77432100000 012222333333 3444455679999999999999988776555 57999
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
+++++-+
T Consensus 125 vvlfGdP 131 (187)
T 3qpd_A 125 VVLFGYT 131 (187)
T ss_dssp EEEESCT
T ss_pred EEEeeCC
Confidence 9999865
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=91.77 E-value=0.26 Score=41.53 Aligned_cols=68 Identities=13% Similarity=-0.004 Sum_probs=45.4
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhC--C----cccce
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMV--P----ERVLS 154 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~--p----~~v~~ 154 (405)
|-....+++|-.- . .. + .+-++++...++.. ...+++|+|+|+|+.++-.++... | ++|.+
T Consensus 40 g~~~~~V~YpA~~-----~--y~-S-~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~a 110 (205)
T 2czq_A 40 GGTIYNTVYTADF-----S--QN-S-AAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKG 110 (205)
T ss_dssp SEEEEECCSCCCT-----T--CC-C-HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEE
T ss_pred CCCceeecccccC-----C--Cc-C-HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEE
Confidence 3345777776421 1 11 4 55555555555543 456899999999999988877554 3 47999
Q ss_pred EEEeccC
Q 015550 155 LALLNVT 161 (405)
Q Consensus 155 lvl~~~~ 161 (405)
++|++-+
T Consensus 111 vvlfGdP 117 (205)
T 2czq_A 111 VFLIGNP 117 (205)
T ss_dssp EEEESCT
T ss_pred EEEEeCC
Confidence 9999854
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=88.08 E-value=0.43 Score=43.81 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=19.4
Q ss_pred CccEEEEEEChhHHHHHHHHHh
Q 015550 126 WKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 126 ~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
..++++.|||+||.+|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 3689999999999999988875
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=85.95 E-value=0.15 Score=47.80 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhC
Q 015550 113 MAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 113 ~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 212 Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 212 VLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 33444455544432 4699999999999999888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 405 | ||||
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 2e-20 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 4e-20 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 6e-20 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 7e-20 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 7e-20 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 1e-19 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 7e-19 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 9e-19 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 1e-18 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-18 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 2e-18 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 2e-18 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 2e-17 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 6e-17 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 2e-16 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 6e-16 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 2e-15 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 9e-15 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 1e-14 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 2e-14 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 2e-14 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 5e-14 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 4e-13 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 7e-13 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 1e-12 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 1e-12 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 3e-12 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 1e-10 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 7e-10 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 1e-09 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 2e-08 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 2e-06 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 7e-06 | |
| d2vata1 | 376 | c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalospor | 9e-06 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 2e-05 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 1e-04 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 4e-04 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 7e-04 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 9e-04 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 0.002 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 0.003 |
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 88.4 bits (217), Expect = 2e-20
Identities = 55/302 (18%), Positives = 93/302 (30%), Gaps = 29/302 (9%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+KI Y G GPT ++L+ G G W + LA
Sbjct: 16 PDVKIHYVREGAGPT-LLLLHGWPGFWWEWSKVIGPLA---------------------- 52
Query: 83 GAGIEVCAFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+V D RG G S ++Y+ A D AL+D LG ++A+V GH A++
Sbjct: 53 -EHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIV 111
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
K +RV+ A+ + F F
Sbjct: 112 LHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVC 171
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ + + S R +L +E ++ M+ + G + + +
Sbjct: 172 KKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHT 231
Query: 261 GFL--VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDL 317
V++I G D K Y M + GH + E+ E +
Sbjct: 232 MSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTA 291
Query: 318 IK 319
+
Sbjct: 292 FR 293
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 88.0 bits (216), Expect = 4e-20
Identities = 31/301 (10%), Positives = 69/301 (22%), Gaps = 30/301 (9%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G ++ Y G G ++ G + W + A
Sbjct: 16 KGRRMAYIDEGTGDP-ILFQHGNPTSSYLWRNIMPHCA---------------------- 52
Query: 83 GAGIEVCAFDNRGMG---RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+ A D GMG + + + + + H G+
Sbjct: 53 -GLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSA 111
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+ A ERV +A + + + +A
Sbjct: 112 LGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQ 171
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY-GFDGQIHACWMHKMTQKDIQTIR 258
+ + + A G + S + + + +
Sbjct: 172 VLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLS 231
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLI 318
+ I+ + R P I + G H + + +E+ A+ +
Sbjct: 232 ESPIPKLFINAEPGALTTG-RMRDFCRTW-PNQTEITVAGAHFIQEDSPDEIGAAIAAFV 289
Query: 319 K 319
+
Sbjct: 290 R 290
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.6 bits (215), Expect = 6e-20
Identities = 56/324 (17%), Positives = 104/324 (32%), Gaps = 49/324 (15%)
Query: 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGD 81
+++ + G GP V L G + +W Q+ LA
Sbjct: 19 KPRVRLHFVELGSGPA-VCLCHGFPESWYSWRYQIPALA--------------------- 56
Query: 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIA 141
AG V A D +G G SS P + EY +++ K+++ +D LG QA GH G M+
Sbjct: 57 -QAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLV 115
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+A PERV ++A LN + + ++ E A
Sbjct: 116 WYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNL 175
Query: 202 QEYLEEYVGSSTRRAI------------------------LYQEYVKGISATGMQSNYGF 237
+ +S + + +E ++ +S +
Sbjct: 176 SRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRG 235
Query: 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP 297
+ R ++ D + ++ + + + P + +
Sbjct: 236 PLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIE 294
Query: 298 G-GHLVSHERTEEVNQALIDLIKA 320
GH ++ EVNQ LI + +
Sbjct: 295 DCGHWTQMDKPTEVNQILIKWLDS 318
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 86.9 bits (213), Expect = 7e-20
Identities = 58/313 (18%), Positives = 107/313 (34%), Gaps = 38/313 (12%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQL-KGLAGTDKPNDDDETILQDSVES 79
++++ +G P ++L+ G + W + + LA
Sbjct: 8 GDVELWSDDFGDPADPA-LLLVMGGNLSALGWPDEFARRLAD------------------ 48
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTE-YTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
G+ V +D+R GRS+ Y +A D +A++D G +AHV G SMGA
Sbjct: 49 ----GGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGA 104
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI---------RFFRAKTPE 189
I +A +R+ SL +L G ++ F A
Sbjct: 105 TITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALM 164
Query: 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249
+ A ++ + + S T EY + + +
Sbjct: 165 NQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLP 224
Query: 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308
+R VI HD IA + + LA + P AR+ ++PG GH +
Sbjct: 225 PPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHG 283
Query: 309 EVNQALIDLIKAS 321
+ + ++ +++
Sbjct: 284 PLAEVILAHTRSA 296
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 86.5 bits (212), Expect = 7e-20
Identities = 56/298 (18%), Positives = 95/298 (31%), Gaps = 35/298 (11%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G +I+++ +G G V+ G D W Q++ L+
Sbjct: 7 DGTQIYFKDWGSGKP-VLFSHGWLLDADMWEYQMEYLS---------------------- 43
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
G AFD RG GRS P +Y T + L V G +A
Sbjct: 44 SRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLDLKEVT-LVGFSMGGGDVAR 102
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
+A RV L LL K D F R KT + + ++
Sbjct: 103 YIARHGSARVAGLVLLGAV--TPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNA 160
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ G + + Q + A+ + + M + D+ T+
Sbjct: 161 PFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLV---- 216
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
IHG D I ++A +L A + H + +++N+ L+ +K
Sbjct: 217 ----IHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 85.7 bits (210), Expect = 1e-19
Identities = 56/301 (18%), Positives = 98/301 (32%), Gaps = 38/301 (12%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G++IFY+ +G+G V+ I G DAW QLK +
Sbjct: 7 DGVEIFYKDWGQGRP-VVFIHGWPLNGDAWQDQLKAVV---------------------- 43
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM-GAMIA 141
AG A D RG G Y A D+ L+ L + + HSM G +A
Sbjct: 44 DAGYRGIAHDRRGHGH--STPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELA 101
Query: 142 CKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+ R+ S LL+ K + +R+
Sbjct: 102 RYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQF-WKDTAE 160
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
+ G+ + + ++ T D + + + + DI T+
Sbjct: 161 GFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLV--- 217
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLV--SHERTEEVNQALIDLI 318
+HG D + I R + ++ P A + G H + E+ N+ L++ +
Sbjct: 218 -----VHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272
Query: 319 K 319
Sbjct: 273 N 273
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 83.7 bits (205), Expect = 7e-19
Identities = 58/303 (19%), Positives = 102/303 (33%), Gaps = 46/303 (15%)
Query: 23 NGIKIFYRTYGRGPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G+ Y G G VILI G + W + L+
Sbjct: 11 AGVLTNYHDVGEGQP-VILIHGSGPGVSAYANWRLTIPALS------------------- 50
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D G G + P + + MD L ++AH+ G++ G
Sbjct: 51 ----KFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGI-MDALEIEKAHIVGNAFGGG 105
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+A A ERV + L+ G F L+ A+ + R +D+ +
Sbjct: 106 LAIATALRYSERVDRMVLMGAAGTRFDVTEGLN------AVWGYTPSIENMRNLLDIFAY 159
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
+E A L E S+ + + + +DI+T+ +
Sbjct: 160 DRSLVTDEL-------ARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPN 212
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
+IHGR D + + + RL E + A++ GH E+T+ N+ +++
Sbjct: 213 ETL---IIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFF 268
Query: 319 KAS 321
+
Sbjct: 269 NEA 271
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 83.4 bits (204), Expect = 9e-19
Identities = 54/299 (18%), Positives = 95/299 (31%), Gaps = 35/299 (11%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+G +I+Y+ +G G ++ G D+W Q+ LA
Sbjct: 7 DGTQIYYKDWGSGQP-IVFSHGWPLNADSWESQMIFLA---------------------- 43
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
G V A D RG GR + A D+ L++HL + A +FG S G
Sbjct: 44 AQGYRVIAHDRRGHGR--SSQPWSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVA 101
Query: 143 KLA-AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYS 201
+ RV L+ L + + + + D Y
Sbjct: 102 RYIGRHGTARVAKAGLI-----SAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYK 156
Query: 202 QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261
+ G + A V GM + + + +D++ I
Sbjct: 157 DLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPT 216
Query: 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
V+HG D + I + + L + + G H ++ +++N L+ IK
Sbjct: 217 L---VVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 83.3 bits (204), Expect = 1e-18
Identities = 58/298 (19%), Positives = 99/298 (33%), Gaps = 35/298 (11%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
+ I Y G G T VI++ G W + +
Sbjct: 18 SDFNIHYNEAGNGET-VIMLHGGGPGAGGWSNYYRNVGPFVD------------------ 58
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
AG V D+ G +S V E + A+ V LMD L +AH+ G++MG A
Sbjct: 59 -AGYRVILKDSPGFNKS-DAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATAL 116
Query: 143 KLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQ 202
A P+R+ L L+ G G + ++ + + + + + E + Y Q
Sbjct: 117 NFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQ 176
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262
+ E L Q + I A + I++
Sbjct: 177 SLITEE---------LLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAK-- 225
Query: 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+ GR D + + +L + AR+ GH E +E N+ +ID ++
Sbjct: 226 -TFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGHWAQWEHADEFNRLVIDFLR 281
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 83.0 bits (203), Expect = 1e-18
Identities = 40/294 (13%), Positives = 85/294 (28%), Gaps = 44/294 (14%)
Query: 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86
I+++T G+G ++L+ G + W + L+ +
Sbjct: 2 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS-----------------------SHF 38
Query: 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146
+ D G GRS + + +A G S+G ++A ++A
Sbjct: 39 TLHLVDLPGFGRSRGFGALSLADMAEA-------VLQQAPDKAIWLGWSLGGLVASQIAL 91
Query: 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLE 206
PERV +L + + S + K + Q +E
Sbjct: 92 THPERVRALVTVASSPC------------FSARDEWPGIKPDVLAGFQQQLSDDQQRTVE 139
Query: 207 EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266
++ T ++ + + T + ++ T Q +++
Sbjct: 140 RFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLR 199
Query: 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++G D + L + P + H E L+ L +
Sbjct: 200 LYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 252
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 83.0 bits (203), Expect = 2e-18
Identities = 41/305 (13%), Positives = 89/305 (29%), Gaps = 37/305 (12%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G ++ Y G G V+ + G + W + +A
Sbjct: 15 LGERMHYVDVGPRDGTP-VLFLHGNPTSSYLWRNIIPHVA-------------------- 53
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
A D GMG+ +Y + + A ++ LG ++ + H G+ +
Sbjct: 54 ---PSHRCIAPDLIGMGK--SDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSAL 108
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A PERV +A + + + R + +
Sbjct: 109 GFHWAKRNPERVKGIACMEFIRPIP---TWDEWPEFARETFQAFRTADVGRELIIDQNAF 165
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW----MHKMTQKDIQT 256
+ L + V + + + + F +I + + + +
Sbjct: 166 IEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNW 225
Query: 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315
+ + + G V+ A RLAE L P + +D+ H + + + + +
Sbjct: 226 LHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIA 284
Query: 316 DLIKA 320
+
Sbjct: 285 RWLPG 289
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 82.7 bits (202), Expect = 2e-18
Identities = 56/300 (18%), Positives = 84/300 (28%), Gaps = 31/300 (10%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I+++Y G G V+LI G +W Q + L
Sbjct: 9 NSTPIELYYEDQGSGQP-VVLIHGYPLDGHSWERQTRELL-------------------- 47
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V +D RG G S V A L V +
Sbjct: 48 --AQGYRVITYDRRGFGG-SSKVNTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGEL 104
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A +A ERV LA L A R A D +
Sbjct: 105 ARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYK 164
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ L+E +GS + + I + + + I +
Sbjct: 165 NFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPT-- 222
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++HG D I I R + P A +++ G H + +EVN AL +
Sbjct: 223 ----LILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLA 278
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 79.6 bits (194), Expect = 2e-17
Identities = 50/300 (16%), Positives = 79/300 (26%), Gaps = 33/300 (11%)
Query: 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
N I ++Y +G G V+LI G + +W Q L
Sbjct: 9 NSTSIDLYYEDHGTGQP-VVLIHGFPLSGHSWERQSAALL-------------------- 47
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
AG V +D RG G+SS P +Y T + + L F G +
Sbjct: 48 --DAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVA 105
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
+ R+ +A L + +
Sbjct: 106 RYVSSYG-TARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFF 164
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ Y L + + A I
Sbjct: 165 NDFY--------NLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRI 216
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
++HG D I R+ K P A +++ G H + EEVN AL+ +
Sbjct: 217 DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 78.4 bits (191), Expect = 6e-17
Identities = 47/302 (15%), Positives = 91/302 (30%), Gaps = 29/302 (9%)
Query: 23 NGIKIFYRTYGRGPTK--VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
NGI I+Y+ K ++ + G G + L+ +
Sbjct: 10 NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK------------------- 50
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
GI V +D G GRS P + + + G ++ + G S G +
Sbjct: 51 ---EGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGAL 107
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A A + + L + +++ + ++ A + + Y
Sbjct: 108 ALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEY 167
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD--IQTIR 258
+ Y R E +K + ++ Y + + + I
Sbjct: 168 QEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKIS 227
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDL 317
+ + G +D + AR + EK+ + + HL E E N+ L D
Sbjct: 228 AIKIPTLITVGEYDEVTPN-VARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDF 285
Query: 318 IK 319
I
Sbjct: 286 IL 287
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 77.8 bits (190), Expect = 2e-16
Identities = 43/337 (12%), Positives = 83/337 (24%), Gaps = 67/337 (19%)
Query: 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92
GR P L GL + W L + D AG +V +
Sbjct: 56 GRRPV-AFLQHGLLASATNWISNLPNNSLAFILAD----------------AGYDVWLGN 98
Query: 93 NRGMGRSSVPVKKT------------EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+RG + + + E + + ++ G + H GHS G I
Sbjct: 99 SRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTI 158
Query: 141 ACKLAAMVPERVLSLALLNVTGG----GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196
+ P+ + + L + +
Sbjct: 159 GFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFF 218
Query: 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256
D + E L+ M + A + Q
Sbjct: 219 DQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQA 278
Query: 257 IRSAGFL------------------------------VSVIHGRHDVIAQICYARRLAEK 286
++S F ++V +G +D++A L K
Sbjct: 279 VKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSK 338
Query: 287 LYPVARMIDLPG-GHL---VSHERTEEVNQALIDLIK 319
L + +P HL + + + V ++ ++
Sbjct: 339 LPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMG 375
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 75.4 bits (183), Expect = 6e-16
Identities = 55/301 (18%), Positives = 89/301 (29%), Gaps = 35/301 (11%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
+G IFY+ +G G V+ G + D W Q+
Sbjct: 7 DGTNIFYKDWGPRDGLP-VVFHHGWPLSADDWDNQMLFFLS------------------- 46
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
G V A D RG GRS P + T + L H+ + G +
Sbjct: 47 ---HGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEALDLRGAV-HIGHSTGGGEV 102
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A +A P RV L++ + T + A + Y
Sbjct: 103 ARYVARAEPGRVAKAVLVS-----AVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFY 157
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ G + A + Q + GM + A + D++ I
Sbjct: 158 IDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP 217
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
V HG D + A + +L A + G H + E +N L+ +K
Sbjct: 218 VL---VAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274
Query: 320 A 320
+
Sbjct: 275 S 275
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 74.1 bits (180), Expect = 2e-15
Identities = 56/316 (17%), Positives = 94/316 (29%), Gaps = 48/316 (15%)
Query: 22 DNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
D+ +++ G G V+++ G G +
Sbjct: 19 DDRHTLYFEQCGNPHGKP-VVMLHGGPGGGCNDKMRRFHDP------------------- 58
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
A + FD RG GRS+ + TT + D+ L HLG + VFG S G+
Sbjct: 59 ----AKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGST 114
Query: 140 IACKLAAMVPERVLSLALLNVT-----------GGGFQCCPKLDLQTLSIAIRFFRAKTP 188
+A A P++V L L + G + AI
Sbjct: 115 LALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADL 174
Query: 189 EKRAAVDLDTHYSQEYLE--------EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240
L + L E S + + +
Sbjct: 175 MSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYF 234
Query: 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-G 299
++ + Q R A ++HGR+DV+ + A L + P A++ P G
Sbjct: 235 VNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASG 293
Query: 300 HLVSH-ERTEEVNQAL 314
H E + + +A
Sbjct: 294 HSAFEPENVDALVRAT 309
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 72.2 bits (175), Expect = 9e-15
Identities = 58/323 (17%), Positives = 101/323 (31%), Gaps = 52/323 (16%)
Query: 22 DNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
+G +I++ G G + I G G + +
Sbjct: 19 GDGHRIYWELSGNPNGKP-AVFIHGGPGGGISPHHRQLFDP------------------- 58
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+V FD RG GRS TT + D+ L + G +Q VFG S G+
Sbjct: 59 ----ERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGST 114
Query: 140 IACKLAAMVPERVLSLALLNVTG------------GGFQCCPKLDLQTLSIAIRFFRAKT 187
+A A PERV + L + G + P+ + LSI R
Sbjct: 115 LALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDV 174
Query: 188 PEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247
+ + S + + ++ G +I +
Sbjct: 175 IAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFT 234
Query: 248 KMTQKDIQTIRSAGFL------VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GH 300
+ + ++HGR+D+ Q+ A LA+ P A + + G GH
Sbjct: 235 HLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGH 293
Query: 301 LVSHERTEEVNQALIDLIKASEK 323
++Q L+ A+++
Sbjct: 294 SYDEP--GILHQ----LMIATDR 310
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.7 bits (174), Expect = 1e-14
Identities = 32/285 (11%), Positives = 79/285 (27%), Gaps = 31/285 (10%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
VI++ GL + ++ L+ + + G V D
Sbjct: 5 VIVVHGLFDSSYSFRHLLEYIN--------------------ETHPGTVVTVLDLFDGRE 44
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE----RVLS 154
S P+ + + V+ +M H+ +S G ++ L +++ + +S
Sbjct: 45 SLRPL---WEQVQGFREAVVPIMAKAPQ-GVHLICYSQGGLVCRALLSVMDDHNVDSFIS 100
Query: 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR 214
L+ + G K T + + +P + + + + + Y+ +S+
Sbjct: 101 LSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSF 160
Query: 215 RAILYQEYVKGISATGMQSNYGFDG--QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272
A++ E + ++ I +T +V+
Sbjct: 161 LALINGERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQ 220
Query: 273 VIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316
++ + G H H +
Sbjct: 221 LVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEP 265
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 70.6 bits (171), Expect = 2e-14
Identities = 46/300 (15%), Positives = 88/300 (29%), Gaps = 48/300 (16%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G++ Y G+G VILI G + W + LA
Sbjct: 10 GGVETRYLEAGKGQP-VILIHGGGAGAESEGNWRNVIPILA------------------- 49
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
V A D G G+++ P + +I + K + G+SMG
Sbjct: 50 ----RHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKV-SIVGNSMGGA 104
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
++ + E V +L L+ G + + T
Sbjct: 105 TGLGVSVLHSELVNALVLMGSAGLVVEIHE------------------DLRPIINYDFTR 146
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259
+L + + + + + AT + + + D + IR
Sbjct: 147 EGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRK 206
Query: 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318
V+ G+ D + + A + + + + +P GH E E+ A + +
Sbjct: 207 VQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFL 265
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 70.3 bits (170), Expect = 2e-14
Identities = 31/286 (10%), Positives = 77/286 (26%), Gaps = 33/286 (11%)
Query: 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94
G +L+ G +W L AG +V A D
Sbjct: 2 GKH-FVLVHGACHGGWSWYKLKPLLEA----------------------AGHKVTALDLA 38
Query: 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLS 154
G +++ + + ++ + GHS+G M P+++ +
Sbjct: 39 ASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYA 98
Query: 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR 214
L L+ + + + + + +
Sbjct: 99 AVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKL 158
Query: 215 RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274
+ E + S+ S+ + A + ++ + I D
Sbjct: 159 YQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRV--------YIVCTEDKG 210
Query: 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+ R + + V I++ G H+ +++ +L+++
Sbjct: 211 IPEEFQRWQIDNI-GVTEAIEIKGADHMAMLCEPQKLCASLLEIAH 255
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 70.3 bits (171), Expect = 5e-14
Identities = 29/140 (20%), Positives = 46/140 (32%), Gaps = 32/140 (22%)
Query: 31 TYGRGPTKVILITGLAGTH------DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84
TY VIL+ GLAGT D W L
Sbjct: 3 TYAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQS----------------------H 40
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
G +V + G P + + V ++ G + ++ GHS G + + +
Sbjct: 41 GAKVYVANLSGFQSDDGP----NGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYV 96
Query: 145 AAMVPERVLSLALLNVTGGG 164
AA+ P+ V S+ + G
Sbjct: 97 AAVAPQLVASVTTIGTPHRG 116
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 66.4 bits (160), Expect = 4e-13
Identities = 31/281 (11%), Positives = 69/281 (24%), Gaps = 34/281 (12%)
Query: 40 ILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99
+LI + W L G +V A D G
Sbjct: 6 VLIHTICHGAWIWHKLKPLLEA----------------------LGHKVTALDLAASGVD 43
Query: 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159
+++ + + L ++ + G S G + A E++ + N
Sbjct: 44 PRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHN 103
Query: 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILY 219
+ CP + L ++ T + +E G +L
Sbjct: 104 SVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYT----------KDGKEITGLKLGFTLLR 153
Query: 220 QEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY 279
+ + + + + D I +
Sbjct: 154 ENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEF 213
Query: 280 ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
E ++ + G H + +T+E+ + L ++
Sbjct: 214 QLWQIENY-KPDKVYKVEGGDHKLQLTKTKEIAEILQEVAD 253
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 66.3 bits (161), Expect = 7e-13
Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 34/139 (24%)
Query: 31 TYGRGPTKVILITGLAGTH-----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
TY + ++L G+ G D W L G
Sbjct: 2 TYTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRR----------------------DG 39
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145
+V + + S E + + + V ++ G + ++ GHS G +A
Sbjct: 40 AQVYVTEVSQLDTS-------EVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVA 92
Query: 146 AMVPERVLSLALLNVTGGG 164
A+ P+ + S + G
Sbjct: 93 AVRPDLIASATSVGAPHKG 111
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 66.1 bits (159), Expect = 1e-12
Identities = 40/301 (13%), Positives = 81/301 (26%), Gaps = 26/301 (8%)
Query: 23 NGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESG 80
G++ Y G + + G + + A
Sbjct: 32 PGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAE------------------- 72
Query: 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+G V A D G G+S PV + +YT + ++AL++ L + + G +
Sbjct: 73 ---SGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFL 129
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
L P R L ++N ++ F A + DL
Sbjct: 130 GLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQ 189
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
+ + + A + G++ Q + T+
Sbjct: 190 FMKRWAPTLTEAEASAYAAP-FPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDW 248
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+ G D + + + +++ GH V + +AL +
Sbjct: 249 NGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAE 308
Query: 320 A 320
Sbjct: 309 T 309
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 66.3 bits (160), Expect = 1e-12
Identities = 43/321 (13%), Positives = 85/321 (26%), Gaps = 43/321 (13%)
Query: 23 NGIKIFY---RTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVES 79
G+ I + + + L+ G G+ + P L+ E
Sbjct: 90 EGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFRE----------------EY 133
Query: 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139
+ G SS P ++ A+ V LM LG+ ++
Sbjct: 134 TPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGS 193
Query: 140 IACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTH 199
+L + + ++ L P ++ + + R + H
Sbjct: 194 FVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEH 253
Query: 200 YSQEYLEEYVGSSTRRAILYQEYVKGISAT-GMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
++ +V SS+ A+L K + + + W+ + + I T R
Sbjct: 254 STRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYR 313
Query: 259 SAGFL-------------------VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G 298
D+ R + D G
Sbjct: 314 ETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVP---RSWIATTGNLVFFRDHAEG 370
Query: 299 GHLVSHERTEEVNQALIDLIK 319
GH + ER E+ L ++
Sbjct: 371 GHFAALERPRELKTDLTAFVE 391
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 64.2 bits (154), Expect = 3e-12
Identities = 42/294 (14%), Positives = 82/294 (27%), Gaps = 42/294 (14%)
Query: 28 FYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87
F + R P V+L+ GL G+ W P L LA
Sbjct: 9 FAKPTARTPL-VVLVHGLLGSGADWQPVLSHLA----------------------RTQCA 45
Query: 88 VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147
D G G + + + + + G+S+G + A
Sbjct: 46 ALTLDLPGHGTNPERHCDN-FAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQ 104
Query: 148 VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEE 207
L+L + GG F + + + + ++ L Y Q
Sbjct: 105 GAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVF-- 162
Query: 208 YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267
+ L E + + A + + + +++ + +
Sbjct: 163 --------SSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYV 214
Query: 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320
G D ++LAE + GH V HE+ + + + +I +
Sbjct: 215 CGEQDS-----KFQQLAES--SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHS 261
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 59.5 bits (142), Expect = 1e-10
Identities = 43/307 (14%), Positives = 77/307 (25%), Gaps = 40/307 (13%)
Query: 20 LNDNGIKIFYRTYGR--GPTKVILITGL---AGTHDAWGPQLKGLAGTDKPNDDDETILQ 74
+ G P V+L+ G A W P + LA
Sbjct: 9 FPSGTLASHALVAGDPQSPA-VVLLHGAGPGAHAASNWRPIIPDLA-------------- 53
Query: 75 DSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGH 134
V A D G G+S P + + + + L H
Sbjct: 54 ---------ENFFVVAPDLIGFGQSEYPETYPGHIMSWVG-MRVEQILGLMNHFGIEKSH 103
Query: 135 SMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194
+G + + + G L+ + F+ +
Sbjct: 104 IVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYREL 163
Query: 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254
Y E R + + M + + + +
Sbjct: 164 IHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPH 223
Query: 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313
+ V HGR D I + + L + L A ++ L GH ER + +
Sbjct: 224 DVL--------VFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPM 274
Query: 314 LIDLIKA 320
L++ +A
Sbjct: 275 LMEHFRA 281
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 56.8 bits (135), Expect = 7e-10
Identities = 34/299 (11%), Positives = 84/299 (28%), Gaps = 66/299 (22%)
Query: 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85
K F+ + G V+L+ G G + L G
Sbjct: 3 KPFF--FEAGERAVLLLHGFTGNSADVRMLGRFLE----------------------SKG 38
Query: 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMA-KDVIALMDHLGWKQAHVFGHSMGAMIACKL 144
A +G G + T + + + G+++ V G S+G + + KL
Sbjct: 39 YTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKL 98
Query: 145 AAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEY 204
VP C + +++ E + ++
Sbjct: 99 GYTVPIEG-----------IVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 147
Query: 205 LEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264
+E + + ++ +
Sbjct: 148 ME---------------------------KFKQTPMKTLKALQELIADVRDHLDLIYAPT 180
Query: 265 SVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHER-TEEVNQALIDLIKA 320
V+ RHD + A + ++ PV ++ GH+++ ++ +++++ + +++
Sbjct: 181 FVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 239
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 53.6 bits (128), Expect = 1e-09
Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 39/144 (27%)
Query: 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDG 82
G+ + + G+GP +++ + +
Sbjct: 9 YGLNLVFDRVGKGPPVLLV-------AEEASRWPE-----------------------AL 38
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142
G D G GR+ P + +A V + V +G +
Sbjct: 39 PEGYAFYLLDLPGYGRTEGP----RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGP 94
Query: 143 KLAA-----MVPERVLSLALLNVT 161
L A + E V +L+
Sbjct: 95 HLEALGLRALPAEGVEVAEVLSSK 118
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 53.0 bits (126), Expect = 2e-08
Identities = 37/309 (11%), Positives = 76/309 (24%), Gaps = 73/309 (23%)
Query: 22 DNGIKI-FYRTYGRGPTK-----VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQD 75
+NG ++ + T + +++ +G A D + + L+
Sbjct: 12 NNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST-------------- 57
Query: 76 SVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK---QAHVF 132
G V +D+ S E+T + + L K +
Sbjct: 58 --------NGFHVFRYDSLHHVGLS-SGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLI 108
Query: 133 GHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192
S+ A +A ++ + L ++ TL A+ F P
Sbjct: 109 AASLSARVAYEVI----------SDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDEL 158
Query: 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252
DLD + E +V + K+
Sbjct: 159 PNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTL----------------------DKVANT 196
Query: 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPGGHLVSHERTEEVN 311
+ I +D + + + ++ L G E +
Sbjct: 197 SVPLI--------AFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVLR 248
Query: 312 QALIDLIKA 320
+ KA
Sbjct: 249 NFYQSVTKA 257
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (110), Expect = 2e-06
Identities = 27/241 (11%), Positives = 59/241 (24%), Gaps = 19/241 (7%)
Query: 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALM-DHLGWKQAHVFGHSMGAMIACK 143
I + +A I + V G+S GA +A +
Sbjct: 49 SIPTYGLQCTRAAPLD--------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFE 100
Query: 144 LAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA-AVDLDTHYSQ 202
+ + + + N + T S + E A+
Sbjct: 101 MCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFT 160
Query: 203 EYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-------MHKMTQKDIQ 255
+ V + +E V ++S+ G D Q + + Q +
Sbjct: 161 DMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPK 220
Query: 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGH--LVSHERTEEVNQA 313
++ + L++ + + G H L+ E +
Sbjct: 221 AKYYGNVMLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIEGDHRTLLEGSGLESIISI 280
Query: 314 L 314
+
Sbjct: 281 I 281
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 44.1 bits (103), Expect = 7e-06
Identities = 18/159 (11%), Positives = 36/159 (22%), Gaps = 33/159 (20%)
Query: 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98
V+++ G+ G + L G
Sbjct: 5 VVMVHGIGGASFNFAGIKSYLV----------------------SQGWSRDKLYAVDFWD 42
Query: 99 SSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLA 156
++++ V ++D G K+ + HSMG + +V ++
Sbjct: 43 ---KTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 99
Query: 157 LLNVTGGGF------QCCPKLDLQTLSIAIRFFRAKTPE 189
L P + SI
Sbjct: 100 TLGGANRLTTGKALPGTDPNQKILYTSIYSSADMIVMNY 138
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} Length = 376 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Score = 45.2 bits (106), Expect = 9e-06
Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 20/152 (13%)
Query: 23 NGIKIFYRTYGR---GPTKVILI-TGLAGTHDA--WGPQLKGLAGTDKPNDDDET--ILQ 74
+ + Y+++GR +++ L + W P L G + D I
Sbjct: 27 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWP---TLFGQGRAFDTSRYFIICL 83
Query: 75 DSVESGDGGAG---IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG-WKQAH 130
+ + S G AG + A R G + P T + + ++D LG + A
Sbjct: 84 NYLGSPFGSAGPCSPDPDAEGQRPYG-AKFPR----TTIRDDVRIHRQVLDRLGVRQIAA 138
Query: 131 VFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162
V G SMG M + A PE V + + +
Sbjct: 139 VVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 170
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.1 bits (100), Expect = 2e-05
Identities = 24/141 (17%), Positives = 40/141 (28%), Gaps = 28/141 (19%)
Query: 23 NGIKIFYRTYGRGPTK----VILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDS 76
G +F+R G + V+L+ G+ + + W L LA
Sbjct: 14 QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLA---------------- 57
Query: 77 VESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM 136
AG A D G+G S + A++D L V S+
Sbjct: 58 ------QAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSL 111
Query: 137 GAMIACKLAAMVPERVLSLAL 157
M + ++
Sbjct: 112 SGMYSLPFLTAPGSQLPGFVP 132
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 41.3 bits (96), Expect = 1e-04
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 5/68 (7%)
Query: 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK 143
G C + V T+ M + AL G + V S G ++A
Sbjct: 59 LGYTPCWISPPPFMLNDTQV-----NTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQW 113
Query: 144 LAAMVPER 151
P
Sbjct: 114 GLTFFPSI 121
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 39.5 bits (91), Expect = 4e-04
Identities = 27/241 (11%), Positives = 52/241 (21%), Gaps = 48/241 (19%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTT--KIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140
+ A G G + + A++ G + GHS GA++
Sbjct: 86 QEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLLGHSGGALL 145
Query: 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHY 200
A +LA + P VD
Sbjct: 146 AHELAFRLERA--------------------------------HGAPPAGIVLVDPYPPG 173
Query: 201 SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260
QE +E + + +
Sbjct: 174 HQEPIEVWSRQLGEGLFAGEL-------------EPMSDARLLAMGRYARFLAGPRPGRS 220
Query: 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL-VSHERTEEVNQALIDLIK 319
V ++ + + D+PG H + + V +A++ +
Sbjct: 221 SAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLD 280
Query: 320 A 320
A
Sbjct: 281 A 281
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 38.1 bits (87), Expect = 7e-04
Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 219 YQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQIC 278
Q + + D Q I + +VI + D I
Sbjct: 83 LQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQIVPFS 142
Query: 279 YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319
+++ LA+++ A + ++ GH + E + + D++
Sbjct: 143 FSKDLAQQID--AALYEVQHGGHFLEDEGFTSLPI-VYDVLT 181
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 38.1 bits (87), Expect = 9e-04
Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 41/209 (19%)
Query: 113 MAKDVIALM-DHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171
L+ +FG+S G +A + A + + + +
Sbjct: 56 RLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRI------------- 102
Query: 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGM 231
+ +K+ DLD + +E + + L E VK
Sbjct: 103 -----------IMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKT 151
Query: 232 QSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVA 291
+ Y + + + K + ++ D + E
Sbjct: 152 HAFYSYYVNLISTGQVKAD-------------IDLLTSGADF-DIPEWLASWEEATTGAY 197
Query: 292 RMIDLPGGH--LVSHERTEEVNQALIDLI 318
RM G H ++ E + L++ +
Sbjct: 198 RMKRGFGTHAEMLQGETLDRNAGILLEFL 226
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 37.4 bits (85), Expect = 0.002
Identities = 32/302 (10%), Positives = 66/302 (21%), Gaps = 56/302 (18%)
Query: 23 NGIKI---FYRTYGRGPTKVILIT-GLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVE 78
+I + GP I+ G ++D ++ A
Sbjct: 65 GNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWAL----------------- 107
Query: 79 SGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA 138
G RG RS + ++D + V+ ++ A
Sbjct: 108 -----HGYATFGMLVRGQQRSEDTS--ISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA 160
Query: 139 MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198
+ V E + + + GG L +AAV
Sbjct: 161 LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALS---------------DIPKAAVAD-- 203
Query: 199 HYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258
+ E + + + L + + + M+ + + +
Sbjct: 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVL- 262
Query: 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLI 318
+ G D + L + HE +
Sbjct: 263 -------MSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFG---HEYIPAFQTEKLAFF 312
Query: 319 KA 320
K
Sbjct: 313 KQ 314
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 37.0 bits (85), Expect = 0.003
Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Query: 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGWKQAHVFGHSMGAMIA 141
V A G +A A++ G K V GHS GA++A
Sbjct: 68 RGIAPVRAVPQPGYEEGEPLPSSMAA----VAAVQADAVIRTQGDKPFVVAGHSAGALMA 123
Query: 142 CKLAAMVPERVLSLALL 158
LA + +R +
Sbjct: 124 YALATELLDRGHPPRGV 140
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 405 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.97 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.97 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.96 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.95 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.95 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.94 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.93 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.91 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.91 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.9 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.89 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.88 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.88 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.88 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.88 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.87 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.87 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.86 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.85 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.85 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.81 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.8 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.79 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.78 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.76 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.75 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.75 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.75 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.73 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.73 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.72 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.69 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.67 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.67 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.66 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.65 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.62 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.61 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.52 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.49 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.32 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.27 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.27 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.24 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.24 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.23 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.16 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.13 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.09 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.09 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.03 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.02 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.96 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.95 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.94 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.91 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.89 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.77 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.6 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.51 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.49 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.41 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.4 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.35 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.35 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.31 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 96.75 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 96.23 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 96.19 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 96.19 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.07 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 95.97 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 95.67 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 95.6 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 95.4 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 94.99 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 94.98 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 94.91 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 94.75 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 94.7 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 94.69 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 93.56 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 89.51 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 88.63 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=2e-35 Score=269.44 Aligned_cols=273 Identities=21% Similarity=0.253 Sum_probs=180.3
Q ss_pred CcccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhh-hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
++++.++|++|+|+++|+ +.|+|||+||++++...|.. +++.|.+ +||+|+++|+|
T Consensus 2 e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~ 59 (297)
T d1q0ra_ 2 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLAD----------------------GGLHVIRYDHR 59 (297)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHHT----------------------TTCEEEEECCT
T ss_pred CeEEEECCEEEEEEEecCCCCCEEEEECCCCcChhHHHHHHHHHHHh----------------------CCCEEEEEeCC
Confidence 356888999999999996 56789999999999998854 6677776 49999999999
Q ss_pred CCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 95 GMGRSSVPVK-KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 95 G~G~S~~~~~-~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
|||.|+.+.. ...++++++++|+.+++++++.++++++||||||.+++.+|..+|++|+++|++++...... ..
T Consensus 60 G~G~S~~~~~~~~~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~-----~~ 134 (297)
T d1q0ra_ 60 DTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDID-----FD 134 (297)
T ss_dssp TSTTSCCCCTTTSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCC-----HH
T ss_pred CCcccccccccccccccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEcccccccc-----ch
Confidence 9999975443 34579999999999999999999999999999999999999999999999999997642211 00
Q ss_pred HHHHHHHHHhhccC------hhhh---hccCcccccCHhHHH-------hhhC--CCchhHHHHHHHHhhhhhccccCcc
Q 015550 174 QTLSIAIRFFRAKT------PEKR---AAVDLDTHYSQEYLE-------EYVG--SSTRRAILYQEYVKGISATGMQSNY 235 (405)
Q Consensus 174 ~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
.............. .... ............... .... ........................
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 213 (297)
T d1q0ra_ 135 ANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLA- 213 (297)
T ss_dssp HHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCS-
T ss_pred hhhHHHhhhhhhhhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccch-
Confidence 00000000000000 0000 000000000000000 0000 000011111111111110000000
Q ss_pred cchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHH
Q 015550 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQAL 314 (405)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i 314 (405)
.. ...........+....++++++||++|+|++|.++|++.++++.+.+ |+++++++++ ||+++.|+|+++++.|
T Consensus 214 ~~---~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i 289 (297)
T d1q0ra_ 214 EP---YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVI 289 (297)
T ss_dssp CC---CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCSSCCGGGHHHHHHHH
T ss_pred hh---hhhhhhhhccccchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCcchhhCHHHHHHHH
Confidence 00 00000111123444667889999999999999999999999999987 9999999998 9999999999999999
Q ss_pred HHHHHhh
Q 015550 315 IDLIKAS 321 (405)
Q Consensus 315 ~~fl~~~ 321 (405)
.+||+..
T Consensus 290 ~~~l~~~ 296 (297)
T d1q0ra_ 290 LAHTRSA 296 (297)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9999864
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1.1e-35 Score=270.03 Aligned_cols=275 Identities=16% Similarity=0.182 Sum_probs=184.7
Q ss_pred CCCcccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 15 APDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
-+.++++++|.+|+|.+.|+ .+|+|||+||++++...|.++++.|.+ +|+|+++|+
T Consensus 7 ~~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~d~ 63 (291)
T d1bn7a_ 7 FDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-----------------------SHRCIAPDL 63 (291)
T ss_dssp CCCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCGGGGTTTHHHHTT-----------------------TSCEEEECC
T ss_pred CCCeEEEECCEEEEEEEeCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEEeC
Confidence 34578899999999999996 456799999999999999999999986 999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchh
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (405)
||||.|+.+.. .++.+++++|+.+++++++.++++++||||||.+++.+|.++|+++++++++++........ ....
T Consensus 64 ~G~G~S~~~~~--~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~-~~~~ 140 (291)
T d1bn7a_ 64 IGMGKSDKPDL--DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWD-EWPE 140 (291)
T ss_dssp TTSTTSCCCSC--CCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGG-GSCH
T ss_pred CCCcccccccc--ccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccch-hhhh
Confidence 99999987654 78999999999999999999999999999999999999999999999999998764322111 1111
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh-------
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM------- 246 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 246 (405)
........+............ ...+....+........ .......+........... ...........
T Consensus 141 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 215 (291)
T d1bn7a_ 141 -FARETFQAFRTADVGRELIID-QNAFIEGVLPKCVVRPL-TEVEMDHYREPFLKPVDRE--PLWRFPNEIPIAGEPANI 215 (291)
T ss_dssp -HHHHHHHHHTSTTHHHHHHTT-SCHHHHTHHHHTCSSCC-CHHHHHHHHGGGSSGGGGH--HHHHHHHHSCBTTBSHHH
T ss_pred -hhhhHHHHHhhhhhHHHhhhh-hhhhHHhhhhhhccccc-hHHHHHHHHHHhcchhhhH--HHHHHHHHhhhhhhhchh
Confidence 111111111111111110000 00000111111111111 1111111111111000000 00000000000
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
..........++++++|+++|+|++|.++|++.++++.+.+ ++++++++++ ||+++.|+|+++++.|.+||+..
T Consensus 216 ~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 216 VALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred hhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 00111223456788999999999999999999999999987 9999999987 99999999999999999999764
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=6.8e-36 Score=268.72 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=175.7
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCc---hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDA---WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~---~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
++++++|.+++|++.|+|+ +|||+||++++... |..+++.|.+ +|+|+++|+|
T Consensus 6 ~~i~~~G~~~~Y~~~G~G~-pvvllHG~~~~~~~~~~~~~~~~~l~~-----------------------~~~vi~~Dl~ 61 (271)
T d1uk8a_ 6 KSILAAGVLTNYHDVGEGQ-PVILIHGSGPGVSAYANWRLTIPALSK-----------------------FYRVIAPDMV 61 (271)
T ss_dssp EEEEETTEEEEEEEECCSS-EEEEECCCSTTCCHHHHHTTTHHHHTT-----------------------TSEEEEECCT
T ss_pred CEEEECCEEEEEEEEeeCC-eEEEECCCCCCccHHHHHHHHHHHHhC-----------------------CCEEEEEeCC
Confidence 4588999999999999985 59999999987765 5667888876 9999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|||.|+.+.. ..++.+++++++..++++++.++++++||||||.+++.+|.++|++++++|++++.+........
T Consensus 62 G~G~S~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~---- 136 (271)
T d1uk8a_ 62 GFGFTDRPEN-YNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEG---- 136 (271)
T ss_dssp TSTTSCCCTT-CCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHH----
T ss_pred CCCCcccccc-ccccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhh----
Confidence 9999987654 46789999999999999999999999999999999999999999999999999987533221111
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhc----cccCcccchhhhHHhhhccc
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISAT----GMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 249 (405)
...... ........ ........... ................. ....... ........ .
T Consensus 137 -~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~ 199 (271)
T d1uk8a_ 137 -LNAVWG--YTPSIENM----------RNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFP--EPRQRWID--A 199 (271)
T ss_dssp -HHHHHT--CCSCHHHH----------HHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSC--SSTHHHHH--H
T ss_pred -hhhhhh--ccchhHHH----------HHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcc--hhhhhhhh--h
Confidence 100000 00000000 00000000000 00000000000000000 0000000 00000000 0
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.....+.+.++++|+|+|+|++|.++|++..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 200 ~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 200 LASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp HCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred ccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhC-CCCEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 01122456788999999999999999999999999987 8999999998 9999999999999999999986
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=9.2e-36 Score=267.40 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=175.5
Q ss_pred CcccccCCEEEEEEEccCCCCeEEEEecCCCCCC---chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 17 ~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
++++++||.+|+|.+.|+|+ +|||+||++++.. .|..+++.|++ +|+|+++|+
T Consensus 4 ~~~~~~dg~~l~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~D~ 59 (268)
T d1j1ia_ 4 ERFVNAGGVETRYLEAGKGQ-PVILIHGGGAGAESEGNWRNVIPILAR-----------------------HYRVIAMDM 59 (268)
T ss_dssp EEEEEETTEEEEEEEECCSS-EEEEECCCSTTCCHHHHHTTTHHHHTT-----------------------TSEEEEECC
T ss_pred CeEEEECCEEEEEEEEcCCC-eEEEECCCCCCccHHHHHHHHHHHHhc-----------------------CCEEEEEcc
Confidence 45688999999999999986 5999999998765 47788888876 999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-cEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
||||.|+.+.. .++.+++++|+.+++++++.+ +++++||||||.+++.+|.++|++|+++|++++++..........
T Consensus 60 ~G~G~S~~~~~--~~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 137 (268)
T d1j1ia_ 60 LGFGKTAKPDI--EYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR 137 (268)
T ss_dssp TTSTTSCCCSS--CCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred cccccccCCcc--ccccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhh
Confidence 99999987654 778999999999999999874 799999999999999999999999999999998753322111100
Q ss_pred hHHHHHHHHHhhccChhh-----hhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 173 LQTLSIAIRFFRAKTPEK-----RAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
. .... ...... ................. .+......... ..+..........
T Consensus 138 ~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~---~~~~~~~~~~~~~ 194 (268)
T d1j1ia_ 138 P-----IINY--DFTREGMVHLVKALTNDGFKIDDAMINS-------------RYTYATDEATR---KAYVATMQWIREQ 194 (268)
T ss_dssp ---------C--CSCHHHHHHHHHHHSCTTCCCCHHHHHH-------------HHHHHHSHHHH---HHHHHHHHHHHHH
T ss_pred h-----hhhh--hhhhhhhHHHHHHHhhhhhhhhhhhhHH-------------HHHhhhhhhhh---hhhhhhhhhhhcc
Confidence 0 0000 000000 00000000000111100 00000000000 0000001111111
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.......+.++++++|+++|+|++|.++|++.++++.+.+ ++++++++++ ||++++|+|+++++.|.+||.+
T Consensus 195 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 195 GGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp TSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 1122234557888999999999999999999999999987 9999999998 9999999999999999999975
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.3e-34 Score=262.27 Aligned_cols=263 Identities=21% Similarity=0.278 Sum_probs=178.5
Q ss_pred cCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 22 ~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
.++++|+|++.|+|+ +|||+||++++...|..+.+.+... ..+||+|+++|+||||.|..
T Consensus 17 ~~~~~i~y~~~G~G~-~ivllHG~~~~~~~~~~~~~~l~~~-------------------~~~g~~v~~~D~~G~G~S~~ 76 (283)
T d2rhwa1 17 FSDFNIHYNEAGNGE-TVIMLHGGGPGAGGWSNYYRNVGPF-------------------VDAGYRVILKDSPGFNKSDA 76 (283)
T ss_dssp EEEEEEEEEEECCSS-EEEEECCCSTTCCHHHHHTTTHHHH-------------------HHTTCEEEEECCTTSTTSCC
T ss_pred cCCEEEEEEEEcCCC-eEEEECCCCCChhHHHHHHHHHHHH-------------------HHCCCEEEEEeCCCCccccc
Confidence 456899999999875 6999999999999987765443210 00399999999999999987
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
+.. ..++...+++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.+...................
T Consensus 77 ~~~-~~~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 155 (283)
T d2rhwa1 77 VVM-DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFK 155 (283)
T ss_dssp CCC-SSCHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred ccc-cccccchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHH
Confidence 654 3566778899999999999999999999999999999999999999999999998754433333333333333333
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhCCC-chhHHHHHHHHhhhhhccccCcccchhhhHHh-hhcccChhhhhhhhh
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHAC-WMHKMTQKDIQTIRS 259 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 259 (405)
........... ..+....... .............+..... ......... .......+..+.+.+
T Consensus 156 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~ 221 (283)
T d2rhwa1 156 LYAEPSYETLK----------QMLQVFLYDQSLITEELLQGRWEAIQRQPE----HLKNFLISAQKAPLSTWDVTARLGE 221 (283)
T ss_dssp HHHSCCHHHHH----------HHHHHHCSCGGGCCHHHHHHHHHHHHHCHH----HHHHHHHHHHHSCGGGGCCGGGGGG
T ss_pred HhhhhhhhhHH----------HHHHHhhcccccCcHHHHHHHHHHhhhhhh----hhhhhhhhhhhhhccccchHHHHhh
Confidence 33222221111 0111111000 0011111111111000000 000000000 001111233456778
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+++|+++|+|++|.+++++.++++++.+ ++++++++++ ||+++.|+|+++++.|.+||++
T Consensus 222 i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 222 IKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp CCSCEEEEEETTCSSSCTHHHHHHHHHS-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCcCHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 8999999999999999999999999987 9999999998 9999999999999999999986
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2e-35 Score=265.88 Aligned_cols=259 Identities=22% Similarity=0.311 Sum_probs=168.5
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
||.+|+|++.|+|+ +|||+||+++++..|..+++.|.+ +||+|+++|+||||.|+.+
T Consensus 7 dG~~l~y~~~G~g~-~ivlvHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G~S~~~ 63 (274)
T d1a8qa_ 7 DGVEIFYKDWGQGR-PVVFIHGWPLNGDAWQDQLKAVVD----------------------AGYRGIAHDRRGHGHSTPV 63 (274)
T ss_dssp TSCEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTSCCC
T ss_pred CCCEEEEEEECCCC-eEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEeCCCCcccccc
Confidence 89999999999875 599999999999999999998876 3999999999999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHh-CCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
.. .++..++++|+.+++++++.++++++||||||.+++.++++ .|++|++++++++.....................
T Consensus 64 ~~--~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (274)
T d1a8qa_ 64 WD--GYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFD 141 (274)
T ss_dssp SS--CCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHH
T ss_pred cc--cccchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHH
Confidence 64 78999999999999999999999999999999999887655 5899999999997654332221111100000000
Q ss_pred HhhccChhhhhccCcccccCHhHHHhhhC----CCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh
Q 015550 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVG----SSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (405)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (405)
.+.......... ........+.. ...........+....... . ..... .........+..+.+
T Consensus 142 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~-~~~~~~~~~~~~~~l 208 (274)
T d1a8qa_ 142 ALKNGVLTERSQ------FWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQ---T---IEGGV-RCVDAFGYTDFTEDL 208 (274)
T ss_dssp HHHHHHHHHHHH------HHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTS---C---HHHHH-HHHHHHHHCCCHHHH
T ss_pred HHHhhhhhhhHH------HhhhhhhhhhhccccchhhhhhHHHHHHHhhhcc---c---hhhhh-hHHHHhhccchHHHH
Confidence 000000000000 00000000000 0000011111111100000 0 00000 000000111233557
Q ss_pred hhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-Cccccc--cCHHHHHHHHHHHHHh
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSH--ERTEEVNQALIDLIKA 320 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~--e~p~~v~~~i~~fl~~ 320 (405)
.++++|+++|+|++|.+++.+.. +.+.+. .++++++++++ ||++++ ++|++|++.|.+||++
T Consensus 209 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 209 KKFDIPTLVVHGDDDQVVPIDATGRKSAQI-IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp TTCCSCEEEEEETTCSSSCGGGTHHHHHHH-STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HhccceeeeeccCCCCCcCHHHHHHHHHHh-CCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 78899999999999999998654 555565 49999999998 998876 5799999999999964
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-35 Score=273.40 Aligned_cols=277 Identities=21% Similarity=0.283 Sum_probs=181.3
Q ss_pred cccc-CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 19 ALND-NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 19 ~~~~-~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
++++ +|++|+|.+.|+| |+|||+||++++...|..+++.|.+ +||+|+++|+||||
T Consensus 15 ~v~~~~g~~i~y~~~G~g-p~vlllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~D~~G~G 71 (322)
T d1zd3a2 15 YVTVKPRVRLHFVELGSG-PAVCLCHGFPESWYSWRYQIPALAQ----------------------AGYRVLAMDMKGYG 71 (322)
T ss_dssp EEEEETTEEEEEEEECCS-SEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEEECTTST
T ss_pred EEEECCCCEEEEEEEcCC-CeEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEecccccc
Confidence 4554 7999999999987 5799999999999999999999976 49999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc-chhHH-
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK-LDLQT- 175 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~- 175 (405)
.|..+.....++.+++++++.+++++++.++++++||||||.+++.+|.++|++|+++|+++++......... .....
T Consensus 72 ~S~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 151 (322)
T d1zd3a2 72 ESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKA 151 (322)
T ss_dssp TSCCCSCGGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHT
T ss_pred ccccccccccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhc
Confidence 9988766567899999999999999999999999999999999999999999999999999875432211100 00000
Q ss_pred --HHHHHHHhhccChh----------hh-h--ccCcccccCHhHHHhhh-----------CCCchhHHHHHHHHhhhhhc
Q 015550 176 --LSIAIRFFRAKTPE----------KR-A--AVDLDTHYSQEYLEEYV-----------GSSTRRAILYQEYVKGISAT 229 (405)
Q Consensus 176 --~~~~~~~~~~~~~~----------~~-~--~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 229 (405)
......+....... .. . ................. ............+...+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (322)
T d1zd3a2 152 NPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 231 (322)
T ss_dssp CGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHH
T ss_pred cchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhc
Confidence 00000000000000 00 0 00000000000000000 00000111112222222111
Q ss_pred cccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHH
Q 015550 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308 (405)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~ 308 (405)
+.............. .........+++++||++|+|++|.+++++..+.+.+.+ ++++++++++ ||++++|+|+
T Consensus 232 ~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~ 306 (322)
T d1zd3a2 232 GFRGPLNWYRNMERN----WKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPT 306 (322)
T ss_dssp TTHHHHHTTSCHHHH----HHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCHHHHSHH
T ss_pred ccccccccccccccc----cccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHH
Confidence 111000000000000 011222344678999999999999999999988888875 9999999998 9999999999
Q ss_pred HHHHHHHHHHHhhcC
Q 015550 309 EVNQALIDLIKASEK 323 (405)
Q Consensus 309 ~v~~~i~~fl~~~~~ 323 (405)
+|++.|.+||++...
T Consensus 307 ~v~~~i~~FL~~~~~ 321 (322)
T d1zd3a2 307 EVNQILIKWLDSDAR 321 (322)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhcCC
Confidence 999999999998753
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.9e-35 Score=265.00 Aligned_cols=262 Identities=22% Similarity=0.325 Sum_probs=170.7
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
.+.++++|+|.+.|+|+ +|||+||++++...|.++++.|.+ +||+|+++|+||||.|
T Consensus 8 ~~~~~v~i~y~~~G~G~-~ivllHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G~S 64 (277)
T d1brta_ 8 ENSTSIDLYYEDHGTGQ-PVVLIHGFPLSGHSWERQSAALLD----------------------AGYRVITYDRRGFGQS 64 (277)
T ss_dssp ETTEEEEEEEEEECSSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTSTTS
T ss_pred CcCCcEEEEEEEEccCC-eEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeCCCCCcc
Confidence 34468899999999876 599999999999999999998876 3999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhH-HHHHHHHHhCCcccceEEEeccCCCCCCCCcc-----chh
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPK-----LDL 173 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-----~~~ 173 (405)
+.... .++++++++|+.+++++++.++++++|||||| .++..+|..+|++|+++|++++..+....... ...
T Consensus 65 ~~~~~--~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 142 (277)
T d1brta_ 65 SQPTT--GYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQ 142 (277)
T ss_dssp CCCSS--CCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCH
T ss_pred ccccc--ccchhhhhhhhhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhh
Confidence 86553 78999999999999999999999999999996 55666788889999999999976533221111 111
Q ss_pred HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhh
Q 015550 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (405)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (405)
..................... ..... ..................+.... ... +..... .......+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~--~~~~~~~~~ 209 (277)
T d1brta_ 143 EFFDGIVAAVKADRYAFYTGF-FNDFY---NLDENLGTRISEEAVRNSWNTAA-SGG------FFAAAA--APTTWYTDF 209 (277)
T ss_dssp HHHHHHHHHHHHCHHHHHHHH-HHHHT---THHHHBTTTBCHHHHHHHHHHHH-HSC------HHHHHH--GGGGTTCCC
T ss_pred hHHHHHHHhhhccchhhhhhc-ccccc---ccchhhhhhhhHHHhhhhhcccc-hhh------hhhhhh--hhhhhhhhH
Confidence 111111111110000000000 00000 00000011111111111110000 000 000000 000111223
Q ss_pred hhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 254 IQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 254 ~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.+.+.++++|+++|+|++|.+++++.. +.+.+. .++++++++++ ||++++|+|+++++.|.+||++
T Consensus 210 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 210 RADIPRIDVPALILHGTGDRTLPIENTARVFHKA-LPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp TTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHH-CTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHhcCccceeEeecCCCCcCHHHHHHHHHHh-CCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 355678899999999999999998764 555565 49999999998 9999999999999999999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=4.5e-36 Score=271.49 Aligned_cols=264 Identities=19% Similarity=0.229 Sum_probs=174.6
Q ss_pred cccccCCEEEEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 18 AALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
++++++|.+|+|+..|+ ++|+|||+||++++...|...+..+.+ +||+|+++|+||
T Consensus 5 ~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~~~~~~~~~----------------------~~~~vi~~D~~G 62 (290)
T d1mtza_ 5 NYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTK----------------------EGITVLFYDQFG 62 (290)
T ss_dssp EEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGGG----------------------GTEEEEEECCTT
T ss_pred CeEEECCEEEEEEEcCCCCCCCeEEEECCCCCchHHHHHHHHHHHH----------------------CCCEEEEEeCCC
Confidence 56889999999999996 456899999998888888877777765 499999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
||.|+.+.. ..++++++++|+.++++++ +.++++++||||||.+|+.+|.++|++|+++|++++.... ..
T Consensus 63 ~G~S~~~~~-~~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--------~~ 133 (290)
T d1mtza_ 63 CGRSEEPDQ-SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV--------PL 133 (290)
T ss_dssp STTSCCCCG-GGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBH--------HH
T ss_pred Ccccccccc-ccccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCc--------cc
Confidence 999987644 5789999999999999997 7899999999999999999999999999999999976311 11
Q ss_pred HHHHHHHHhhccChhhh-------hccCccc-cc---CHhHHH-hhhCCCchhHHHHHHHHhhhhhc-----cccCcccc
Q 015550 175 TLSIAIRFFRAKTPEKR-------AAVDLDT-HY---SQEYLE-EYVGSSTRRAILYQEYVKGISAT-----GMQSNYGF 237 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~-------~~~~~~~-~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 237 (405)
................. ....... .+ ...... ....................... ........
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (290)
T d1mtza_ 134 TVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTI 213 (290)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBC
T ss_pred chhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhH
Confidence 11111111111000000 0000000 00 000000 11111111111111110000000 00000000
Q ss_pred hhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHH
Q 015550 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALID 316 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~ 316 (405)
.......+....++.+++|+++|+|++|.++| +.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+
T Consensus 214 -------~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 284 (290)
T d1mtza_ 214 -------TGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSD 284 (290)
T ss_dssp -------CSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred -------hhhhhcccHHHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 00001112335567889999999999999865 6678888876 8999999998 999999999999999999
Q ss_pred HHHhh
Q 015550 317 LIKAS 321 (405)
Q Consensus 317 fl~~~ 321 (405)
||.++
T Consensus 285 FL~~h 289 (290)
T d1mtza_ 285 FILKH 289 (290)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 99874
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=5.6e-35 Score=264.62 Aligned_cols=262 Identities=21% Similarity=0.307 Sum_probs=175.6
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCC---chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
+.+..++.+++|...|+ +.|+|||+||++++.. .|.++++.|++ +|+|+++|+
T Consensus 7 ~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~ 63 (281)
T d1c4xa_ 7 KRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-----------------------NFFVVAPDL 63 (281)
T ss_dssp EEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-----------------------TSEEEEECC
T ss_pred EEEccCCEEEEEEEEecCCCCEEEEECCCCCCCcHHHHHHHHHHHHhC-----------------------CCEEEEEeC
Confidence 34678899999999997 5678999999987765 47888999987 999999999
Q ss_pred CCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 94 RGMGRSSVPVKKTE---YTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 94 ~G~G~S~~~~~~~~---~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
||||.|+.+..... .+.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.+......+
T Consensus 64 ~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~- 142 (281)
T d1c4xa_ 64 IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARP- 142 (281)
T ss_dssp TTSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCC-
T ss_pred CCCccccccccccccchhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccch-
Confidence 99999986654222 34667889999999999999999999999999999999999999999999998753322221
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCc---hhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST---RRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
................... ..+..+..... ................... .+.......+..
T Consensus 143 ---~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 206 (281)
T d1c4xa_ 143 ---PELARLLAFYADPRLTPYR----------ELIHSFVYDPENFPGMEEIVKSRFEVANDPEVR---RIQEVMFESMKA 206 (281)
T ss_dssp ---HHHHHHHTGGGSCCHHHHH----------HHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHH---HHHHHHHHHHSS
T ss_pred ---hHHHHHHHhhhhcccchhh----------hhhhhhcccccccchhhhHHHHHhhhcccchhh---hhhhhhhhHHhh
Confidence 1111111111111111100 00000000000 0000001100000000000 000000000000
Q ss_pred --ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 248 --KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 248 --~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.........+.++++|+|+|+|++|.++|++.++.+++.+ ++++++++++ ||++++|+|+++++.|.+||+.
T Consensus 207 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 207 GMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp CCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred hhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 0011223456788999999999999999999999999987 8999999998 9999999999999999999973
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=3.9e-35 Score=266.39 Aligned_cols=272 Identities=19% Similarity=0.231 Sum_probs=174.0
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.+++++|.+|+|.+.|+|+ +|||+||++++...|.++++.|.+ +|+|+++|+||||
T Consensus 11 ~~~~~~~~~l~y~~~G~gp-~vv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G 66 (293)
T d1ehya_ 11 YEVQLPDVKIHYVREGAGP-TLLLLHGWPGFWWEWSKVIGPLAE-----------------------HYDVIVPDLRGFG 66 (293)
T ss_dssp EEEECSSCEEEEEEEECSS-EEEEECCSSCCGGGGHHHHHHHHT-----------------------TSEEEEECCTTST
T ss_pred eEEEECCEEEEEEEECCCC-eEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEecCCccc
Confidence 3478899999999999875 699999999999999999999987 9999999999999
Q ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHH
Q 015550 98 RSSVPVKK--TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (405)
Q Consensus 98 ~S~~~~~~--~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (405)
.|+..... ..++.+++++|+.+++++++.++++++||||||.+|+.+|.++|+++.++|++++...............
T Consensus 67 ~s~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 146 (293)
T d1ehya_ 67 DSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHV 146 (293)
T ss_dssp TSCCCCTTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC----------
T ss_pred CCccccccccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhh
Confidence 99765432 3567899999999999999999999999999999999999999999999999998753322111000000
Q ss_pred HHHHHHHhhccChhhhhccCcccccCHhHHHhhh-----CCCchhHHHHHHHHhhhhhccccCcccchhhhHH---hhhc
Q 015550 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYV-----GSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA---CWMH 247 (405)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 247 (405)
......... ..................++...+ ............+........ .....+.. ....
T Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 220 (293)
T d1ehya_ 147 HESWYSQFH-QLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPD-----NIHGGFNYYRANIRP 220 (293)
T ss_dssp -CCHHHHHT-TCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTT-----HHHHHHHHHHHHSSS
T ss_pred hhhhhhhhh-ccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccch-----hhhhhhhhhhhcccc
Confidence 000000000 000000000000000011111111 011111111122211111100 00000000 0000
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
............+++|+++|+|++|.++|.+...++.+++.++++++++++ ||++++|+|+++++.|.+|++
T Consensus 221 ~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 221 DAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp SCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred chhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 000011112345789999999999999998877666555569999999998 999999999999999999973
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=9.8e-35 Score=260.95 Aligned_cols=265 Identities=20% Similarity=0.272 Sum_probs=174.0
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
++.+.||.+|+|++.|+|+ +|||+||++++...|.+++..|.+ +||+|+++|+||||
T Consensus 2 ~f~~~dG~~i~y~~~G~g~-pvvllHG~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~G 58 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWGSGQ-PIVFSHGWPLNADSWESQMIFLAA----------------------QGYRVIAHDRRGHG 58 (273)
T ss_dssp EEECTTSCEEEEEEESCSS-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTST
T ss_pred EEEeeCCcEEEEEEECCCC-eEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEechhcC
Confidence 4567899999999999876 599999999999999999999965 39999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHH-HHHhCCcccceEEEeccCCCCCCCCcc----ch
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACK-LAAMVPERVLSLALLNVTGGGFQCCPK----LD 172 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~-~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~ 172 (405)
.|+.+.. .++.+++++|+.+++++++.++.+++|||+||.++.. +|..+|++|.+++++++.+........ ..
T Consensus 59 ~S~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~ 136 (273)
T d1a8sa_ 59 RSSQPWS--GNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP 136 (273)
T ss_dssp TSCCCSS--CCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC
T ss_pred ccccccc--cccccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccch
Confidence 9987654 7899999999999999999999999999998865555 566679999999999976533221111 11
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
...........................+. ...............+.......... ............+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 204 (273)
T d1a8sa_ 137 MEVFDGIRQASLADRSQLYKDLASGPFFG-----FNQPGAKSSAGMVDWFWLQGMAAGHK-------NAYDCIKAFSETD 204 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSS-----TTSTTCCCCHHHHHHHHHHHHHSCHH-------HHHHHHHHHHHCC
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhhhhh-----cccchhhhhHHHHHHHHHhhcccchh-------hhhhhHHHhhhhh
Confidence 11111000000000000000000000000 00000000011111111100000000 0000000001122
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..+.++++++|+++|+|++|.++|.+.++.+.+.+.++++++++++ ||++++|+|+++++.|.+||+
T Consensus 205 ~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 205 FTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp CHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred hhHHHHhhccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 3356678899999999999999999888888776778999999998 999999999999999999997
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=1.3e-34 Score=261.15 Aligned_cols=262 Identities=24% Similarity=0.334 Sum_probs=171.4
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
.+++|+|.+.|+|+ +|||+||++++...|..++..|.. +||+|+++|+||||.|+.+
T Consensus 11 ~~v~i~y~~~G~g~-~illlHG~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~G~S~~~ 67 (279)
T d1hkha_ 11 TPIELYYEDQGSGQ-PVVLIHGYPLDGHSWERQTRELLA----------------------QGYRVITYDRRGFGGSSKV 67 (279)
T ss_dssp EEEEEEEEEESSSE-EEEEECCTTCCGGGGHHHHHHHHH----------------------TTEEEEEECCTTSTTSCCC
T ss_pred CeEEEEEEEEccCC-eEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEechhhCCcccc
Confidence 46799999999875 599999999999999999988855 3999999999999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhH-HHHHHHHHhCCcccceEEEeccCCCCCCCCccc----hhHHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPKL----DLQTLS 177 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~ 177 (405)
.. .++++++++|+.+++++++.++++++|||||| .++..+|..+|++|.++|++++..+........ ......
T Consensus 68 ~~--~~~~~~~~~di~~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 145 (279)
T d1hkha_ 68 NT--GYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFD 145 (279)
T ss_dssp SS--CCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHH
T ss_pred cc--ccchhhhhhhhhhhhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHH
Confidence 54 78999999999999999999999999999996 667777888899999999998764332221111 111111
Q ss_pred HHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh
Q 015550 178 IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (405)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (405)
................. .. .....................+...... ... ........+.. ......+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~-~~~~~~~~~ 215 (279)
T d1hkha_ 146 GIEAAAKGDRFAWFTDF-YK---NFYNLDENLGSRISEQAVTGSWNVAIGS-APV----AAYAVVPAWIE-DFRSDVEAV 215 (279)
T ss_dssp HHHHHHHHCHHHHHHHH-HH---HHHTHHHHBTTTBCHHHHHHHHHHHHTS-CTT----HHHHTHHHHTC-BCHHHHHHH
T ss_pred HHHHhhhhhhhhhhhhh-hh---hhcccchhhhhhhhhhhhhhhhhhhccc-chh----hhhhhhhhhhc-ccccchhhh
Confidence 11111110000000000 00 0000001111111111111111111100 000 00000111111 123345667
Q ss_pred hhcCCcEEEEeecCCccCCHH-HHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 258 RSAGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~-~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+.+++|+++|+|++|.+++.+ ..+.+.+.+ |+++++++++ ||+++.|+|+++++.|.+||++
T Consensus 216 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 216 RAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHCCCEEEEEETTCSSSCTTTTHHHHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred cccCCceEEEEcCCCCccCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 788999999999999999865 566777765 8999999998 9999999999999999999974
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1.7e-34 Score=259.62 Aligned_cols=265 Identities=23% Similarity=0.261 Sum_probs=172.8
Q ss_pred ccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
+.+.||.+|+|+++|+ +.|+|||+||++++...|..+++.|.+ +||+|+++|+||||
T Consensus 3 i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G 60 (275)
T d1a88a_ 3 VTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLS----------------------HGYRVIAHDRRGHG 60 (275)
T ss_dssp EECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHHH----------------------TTCEEEEECCTTST
T ss_pred EEecCCCEEEEEEecCCCCCeEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeccccc
Confidence 4567999999999996 457899999999999999999999866 39999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEECh-hHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc----ch
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM-GAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK----LD 172 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~-Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~ 172 (405)
.|+.+.. .++.+++++|+.+++++++.++++++|||+ ||.+++.+|.++|++|+++|++++.++....... ..
T Consensus 61 ~s~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 138 (275)
T d1a88a_ 61 RSDQPST--GHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLP 138 (275)
T ss_dssp TSCCCSS--CCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBC
T ss_pred ccccccc--cccccccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhh
Confidence 9987654 789999999999999999999999999997 6667788899999999999999976433221111 11
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
............................ ................+.......... ........ + ...+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~---~~~~ 206 (275)
T d1a88a_ 139 LEVFDEFRAALAANRAQFYIDVPSGPFY-----GFNREGATVSQGLIDHWWLQGMMGAAN---AHYECIAA-F---SETD 206 (275)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHTTTT-----TTTSTTCCCCHHHHHHHHHHHHHSCHH---HHHHHHHH-H---HHCC
T ss_pred hhhhhhhhhhhhhhhHHHHHhhhhhhhh-----hcccchhhHHHHHHHHHHHhhcccchH---HHHHHHHH-h---hhhh
Confidence 1111111111111000000000000000 000000000111111111000000000 00000000 0 1122
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHH-HHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~-~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+.++++++|+++|+|++|.++|.+.. +.+.+. .++++++++++ ||+++.|+|+++++.|.+||+.
T Consensus 207 ~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 207 FTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAEL-LANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp CHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHH-STTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred hhHHHHhhccccceeecCCCCCcCHHHHHHHHHHh-CCCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 2355678899999999999999987654 455554 48999999998 9999999999999999999973
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.7e-34 Score=255.20 Aligned_cols=264 Identities=20% Similarity=0.271 Sum_probs=176.3
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
++++.||.+|+|++.|+|+ +|||+||++++...|..+++.|.+ +||+|+++|+||||
T Consensus 2 ~f~~~dG~~l~y~~~G~g~-~vv~lHG~~~~~~~~~~~~~~l~~----------------------~g~~vi~~D~~G~G 58 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWGSGK-PVLFSHGWLLDADMWEYQMEYLSS----------------------RGYRTIAFDRRGFG 58 (271)
T ss_dssp EEECTTSCEEEEEEESSSS-EEEEECCTTCCGGGGHHHHHHHHT----------------------TTCEEEEECCTTST
T ss_pred EEEeECCeEEEEEEEcCCC-eEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeccccc
Confidence 5688899999999999886 599999999999999999999987 49999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHH-HHHHhCCcccceEEEeccCCCCCCCCccchh---
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC-KLAAMVPERVLSLALLNVTGGGFQCCPKLDL--- 173 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~-~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--- 173 (405)
.|+.+.. .++.+++++|+.+++++++.++++++|||+||.+++ .+|..+|+++.+++++++........+....
T Consensus 59 ~S~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 136 (271)
T d1va4a_ 59 RSDQPWT--GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP 136 (271)
T ss_dssp TSCCCSS--CCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBC
T ss_pred ccccccc--ccccccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhh
Confidence 9987654 779999999999999999999999999999887654 5677789999999999987544332222111
Q ss_pred -HHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 174 -QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
................... .+............. ................. ......... ....+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~ 202 (271)
T d1va4a_ 137 LDVFARFKTELLKDRAQFIS------DFNAPFYGINKGQVV-SQGVQTQTLQIALLASL---KATVDCVTA----FAETD 202 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------HHHHHHHTGGGTCCC-CHHHHHHHHHHHHHSCH---HHHHHHHHH----HHHCC
T ss_pred hhHHHHHHHHhhhhhhhhhh------hhcchhhcccchhhh-hhhHHHHHHhhhhhhhh---hhhhhcccc----cchhh
Confidence 1111111000000000000 000000000000000 00000000000000000 000000111 01112
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
....+.++++|+++|+|++|.++|++...++.+++.++++++++++ ||++++|+|+++++.|.+||++
T Consensus 203 ~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 203 FRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp CHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred hhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 2345678899999999999999999888777766668999999998 9999999999999999999964
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=1.6e-34 Score=265.78 Aligned_cols=272 Identities=14% Similarity=0.154 Sum_probs=175.5
Q ss_pred cccCCEEEEEEEccC--CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 20 LNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~--~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
...+|.+++|.+.|+ ++|+|||+||+++++..|..++..|.+ +||+|+++|+||||
T Consensus 29 ~~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~~~~~~~~l~~----------------------~~~~vi~~Dl~G~G 86 (310)
T d1b6ga_ 29 PGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAE----------------------SGARVIAPDFFGFG 86 (310)
T ss_dssp TTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHHH----------------------TTCEEEEECCTTST
T ss_pred cCCCCEEEEEEEecCCCCCCEEEEECCCCCchHHHHHHHHHhhc----------------------cCceEEEeeecCcc
Confidence 457999999999997 457789999999999999999999986 39999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHH
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLS 177 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 177 (405)
.|+.+.....++++.+++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++......... ..+.
T Consensus 87 ~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~----~~~~ 162 (310)
T d1b6ga_ 87 KSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQ----PAFS 162 (310)
T ss_dssp TSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTC----THHH
T ss_pred ccccccccccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccc----hhHH
Confidence 999776656789999999999999999999999999999999999999999999999999998643221100 0000
Q ss_pred HHHHHhhccChhhhhccCcccccC-HhHHHhhhCCCchhHHHHHHHHhhhhhccccCc-ccchhhhH---HhhhcccChh
Q 015550 178 IAIRFFRAKTPEKRAAVDLDTHYS-QEYLEEYVGSSTRRAILYQEYVKGISATGMQSN-YGFDGQIH---ACWMHKMTQK 252 (405)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~ 252 (405)
.............+.......... ..+.......... .....+...+........ ..+..... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T d1b6ga_ 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTE--AEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEA 240 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCH--HHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHhhcchhhhhhhhhhhccchhhhhhhhhhccCccccH--HHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhh
Confidence 000000000000000000000000 0111111111000 001111111100000000 00000000 0000000011
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCC-eEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~-~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
.......+++|+++++|++|.+++++..+.+.+.+ ++ .+++++++ ||+++.++|+.+++.|.+||++
T Consensus 241 ~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 241 ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALI-NGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHS-TTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred hHHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 11233568899999999999999999999999877 55 47888887 9999999999999999999975
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=6.8e-33 Score=255.50 Aligned_cols=123 Identities=24% Similarity=0.314 Sum_probs=108.8
Q ss_pred Cccccc-CCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 17 DAALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 17 ~~~~~~-~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+++.+ ||.+|+|++.|+ ..|+|||+||++++...|......+.+ +|+|+++|+|
T Consensus 13 ~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~~~~l~~-----------------------~~~Vi~~D~r 69 (313)
T d1azwa_ 13 QGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPA-----------------------KYRIVLFDQR 69 (313)
T ss_dssp EEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSCTT-----------------------TEEEEEECCT
T ss_pred CCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCccchHHHhHHhhc-----------------------CCEEEEEecc
Confidence 344544 788999999996 345799999999999888877666654 9999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
|||.|+.+.....++++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++..
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~ 137 (313)
T d1azwa_ 70 GSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp TSTTSBSTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ccCCCCccccccchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEecccc
Confidence 99999877666788999999999999999999999999999999999999999999999999999864
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-33 Score=251.79 Aligned_cols=252 Identities=16% Similarity=0.130 Sum_probs=165.2
Q ss_pred EEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 26 ~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
+|+|+..|+++++|||+||++++...|.++++.|.+ +|+|+++|+||||.|+...
T Consensus 1 ~i~y~~~G~g~~~lvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~~G~G~S~~~~-- 55 (256)
T d1m33a_ 1 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGFG-- 55 (256)
T ss_dssp CCCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHHT-----------------------TSEEEEECCTTSTTCCSCC--
T ss_pred CeEEEEECCCCCeEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEeCCCCCCccccc--
Confidence 378999999988999999999999999999999987 9999999999999997554
Q ss_pred CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC--CCccchhHHHHHHHHHh
Q 015550 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ--CCPKLDLQTLSIAIRFF 183 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~ 183 (405)
.+++.+ +.+.+..+..++++++||||||.+++.+|.++|+++++++++++.+.... ..+.............+
T Consensus 56 -~~~~~d----~~~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (256)
T d1m33a_ 56 -ALSLAD----MAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQL 130 (256)
T ss_dssp -CCCHHH----HHHHHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHH
T ss_pred -cccccc----cccccccccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhh
Confidence 445443 44455566778999999999999999999999999999999987643221 11122222221111111
Q ss_pred hccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (405)
........ ..+............................... .....+......+..+.++++++|
T Consensus 131 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~i~~P 196 (256)
T d1m33a_ 131 SDDQQRTV----------ERFLALQTMGTETARQDARALKKTVLALPMPEVD----VLNGGLEILKTVDLRQPLQNVSMP 196 (256)
T ss_dssp HHHHHHHH----------HHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHH----HHHHHHHHHHHCCCTTGGGGCCSC
T ss_pred hhhhHHHH----------HHHhhhhhccccchhhHHHHHHHhhhhcchhhHH----HHHhhhhhhcccchHHHHHhccCC
Confidence 10000000 0001110001111111111111111111111111 111111111111233566788999
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+++|+|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+++..
T Consensus 197 ~lii~G~~D~~~p~~~~~~l~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ig 255 (256)
T d1m33a_ 197 FLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQRVG 255 (256)
T ss_dssp EEEEEETTCSSSCGGGCC-CTTTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTSC
T ss_pred ccccccccCCCCCHHHHHHHHHHC-CCCEEEEECCCCCchHHHCHHHHHHHHHHHHHHcC
Confidence 999999999999999999998876 8999999998 999999999999999999998753
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-34 Score=245.93 Aligned_cols=194 Identities=19% Similarity=0.301 Sum_probs=161.5
Q ss_pred CCcccccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhh--hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 16 PDAALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 16 ~~~~~~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
.+.+++++|.+++|+..++ .+++|||+||++++...|.. +++.|++ +||+|+
T Consensus 7 ~e~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~----------------------~gy~vi 64 (208)
T d1imja_ 7 REGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQ----------------------AGYRAV 64 (208)
T ss_dssp CCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHH----------------------TTCEEE
T ss_pred eEEEEEECCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHH----------------------cCCeEE
Confidence 4556889999999998765 34689999999999999976 4677877 499999
Q ss_pred EecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCc
Q 015550 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCP 169 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (405)
++|+||||.|+.+.....++....++++.++++.++.++++++||||||.+++.+|.++|++++++|++++....
T Consensus 65 a~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~----- 139 (208)
T d1imja_ 65 AIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD----- 139 (208)
T ss_dssp EECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG-----
T ss_pred EeecccccCCCCCCcccccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccc-----
Confidence 999999999987765455666667788999999999999999999999999999999999999999999875200
Q ss_pred cchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
T Consensus 140 -------------------------------------------------------------------------------- 139 (208)
T d1imja_ 140 -------------------------------------------------------------------------------- 139 (208)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHh
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
....+.+.++++|+|+|+|++|.++|.+. +..+.+ +++++.++++ ||..++++|+++++.|.+||+.
T Consensus 140 -~~~~~~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~-~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 140 -KINAANYASVKTPALIVYGDQDPMGQTSF--EHLKQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp -GSCHHHHHTCCSCEEEEEETTCHHHHHHH--HHHTTS-SSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred -ccccccccccccccccccCCcCcCCcHHH--HHHHhC-CCCeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 00012245678999999999999988653 344555 8999999998 9999999999999999999985
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=8.3e-32 Score=243.65 Aligned_cols=278 Identities=14% Similarity=0.152 Sum_probs=172.8
Q ss_pred CCCcccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 15 APDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 15 ~~~~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
++.++++++|.+|+|.+.|+++ +|||+||++++...|.++++.|++ +|+|+++|+|
T Consensus 8 ~~~~fi~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~Dl~ 63 (298)
T d1mj5a_ 8 GEKKFIEIKGRRMAYIDEGTGD-PILFQHGNPTSSYLWRNIMPHCAG-----------------------LGRLIACDLI 63 (298)
T ss_dssp SCCEEEEETTEEEEEEEESCSS-EEEEECCTTCCGGGGTTTGGGGTT-----------------------SSEEEEECCT
T ss_pred CCCEEEEECCEEEEEEEEcCCC-cEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEEeCC
Confidence 4457899999999999999875 699999999999999999999987 8999999999
Q ss_pred CCCCCCCCCCC--CCCCHHHHHHHHHHHHH-HhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 95 GMGRSSVPVKK--TEYTTKIMAKDVIALMD-HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 95 G~G~S~~~~~~--~~~~~~~~~~dl~~~l~-~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
|||.|+.+... ......+..+++..++. ..+.++++++||||||.+++.+|.++|++|.+++++++...........
T Consensus 64 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~ 143 (298)
T d1mj5a_ 64 GMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFP 143 (298)
T ss_dssp TSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSC
T ss_pred CCCCCCCCccccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhh
Confidence 99999866542 23445566666665554 4567899999999999999999999999999999999875432221111
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccC------cccchhhhHHhh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQS------NYGFDGQIHACW 245 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 245 (405)
..... ..... ........... ................... .....+........... ............
T Consensus 144 ~~~~~-~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (298)
T d1mj5a_ 144 EQDRD-LFQAF-RSQAGEELVLQ--DNVFVEQVLPGLILRPLSE-AEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPAD 218 (298)
T ss_dssp GGGHH-HHHHH-HSTTHHHHHTT--TCHHHHTHHHHTSSSCCCH-HHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHH
T ss_pred hhhhh-hhhhh-hhhhhhhhhhh--hhhhhhhhccccccccchh-hhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhh
Confidence 11111 00000 00000000000 0000000111111111000 00111111000000000 000000000000
Q ss_pred hcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCHHHHHHHHHHHHHhhcC
Q 015550 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
......+....+..+++|+++++|++|.+.+ ...+++.+.+ ++++++++++||++++|+|+++++.|.+||++...
T Consensus 219 ~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~-p~~~~~~~~~GH~~~~e~P~~v~~~i~~fl~~~~~ 294 (298)
T d1mj5a_ 219 VVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTW-PNQTEITVAGAHFIQEDSPDEIGAAIAAFVRRLRP 294 (298)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTC-SSEEEEEEEESSCGGGTCHHHHHHHHHHHHHHHSC
T ss_pred hhhhhhhhhhhhhhcceeEEEEecCCCCcCh-HHHHHHHHHC-CCCEEEEeCCCCchHHhCHHHHHHHHHHHHhhhcc
Confidence 0011123345567889999999999998776 4567777765 88888888789999999999999999999999753
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.97 E-value=7e-32 Score=238.88 Aligned_cols=242 Identities=12% Similarity=0.102 Sum_probs=163.0
Q ss_pred EEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 015550 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (405)
Q Consensus 39 vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (405)
.|||||++++...|+++++.|.+ +||+|+++|+||||.|+.+.. ..++++++++++.
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~----------------------~g~~Via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~ 61 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEA----------------------LGHKVTALDLAASGVDPRQIE-EIGSFDEYSEPLL 61 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEEECCTTSTTCSCCGG-GCCSHHHHTHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEcCCCCCCCCCCCC-CCCCHHHHHHHhh
Confidence 69999999999999999999987 499999999999999987654 4689999999999
Q ss_pred HHHHHhC-CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhh-hcc--
Q 015550 119 ALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR-AAV-- 194 (405)
Q Consensus 119 ~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 194 (405)
+++++++ .++++++||||||.+++.+|.++|++|+++|++++........+.... ............... ...
T Consensus 62 ~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T d3c70a1 62 TFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVV---DKLMEVFPDWKDTTYFTYTKD 138 (256)
T ss_dssp HHHHHSCTTCCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHH---HHHHHHSCCCTTCEEEEEEET
T ss_pred hhhhhhccccceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHh---hhhhhhhhhhhhhHHHhhhcc
Confidence 9988875 678999999999999999999999999999999976533322221111 111111111100000 000
Q ss_pred ---CcccccCHhHHHhhhCCCch-hHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeec
Q 015550 195 ---DLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (405)
Q Consensus 195 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~ 270 (405)
.................... .......... . ..... .... ...........+++|+++|+|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~---~~~~---~~~~~~~~~~~~~~P~l~i~G~ 204 (256)
T d3c70a1 139 GKEITGLKLGFTLLRENLYTLCGPEEYELAKMLT---R-----KGSLF---QNIL---AKRPFFTKEGYGSIKKIYVWTD 204 (256)
T ss_dssp TEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHC---C-----CBCCC---HHHH---TTSCCCCTTTGGGSCEEEEECT
T ss_pred ccccchhhhhhhhhhhhhhhhcchhhHHHhhhhh---h-----hhhHH---Hhhh---hhcchhhhhhccccceeEEeec
Confidence 00111122222222222111 1111111000 0 00000 0000 0011122334567999999999
Q ss_pred CCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 271 HDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 271 ~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+|.++|++..+++.+.+ |+++++++++ ||++++|+|+++++.|.+|+++.
T Consensus 205 ~D~~~~~~~~~~~~~~~-p~~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 205 QDEIFLPEFQLWQIENY-KPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp TCSSSCHHHHHHHHHHS-CCSEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 99999999999999986 8999999998 99999999999999999999763
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.97 E-value=1.1e-31 Score=237.08 Aligned_cols=245 Identities=15% Similarity=0.113 Sum_probs=164.3
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
++|||+||+++++..|..+++.|.+ +||+|+++|+||||.|+.+.. ..++.++++.|
T Consensus 3 ~~vvllHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~ 59 (258)
T d1xkla_ 3 KHFVLVHGACHGGWSWYKLKPLLEA----------------------AGHKVTALDLAASGTDLRKIE-ELRTLYDYTLP 59 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHH----------------------TTCEEEECCCTTSTTCCCCGG-GCCSHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEecCCCCCCCCCCCC-CCcchHHHHHH
Confidence 3699999999999999999999987 499999999999999987654 46789999999
Q ss_pred HHHHHHHhCC-ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh---
Q 015550 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA--- 192 (405)
Q Consensus 117 l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 192 (405)
+..+++.... ++++++||||||.+++.++.++|+++.++|++++.......... ...................
T Consensus 60 ~~~~~~~~~~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 136 (258)
T d1xkla_ 60 LMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSS---FVLEQYNERTPAENWLDTQFLP 136 (258)
T ss_dssp HHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTT---HHHHHHHHTSCTTTTTTCEEEE
T ss_pred HhhhhhcccccccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchH---HHHHHHhhhhhhhhhhhhhhhh
Confidence 9999998865 58999999999999999999999999999999976533222111 1111111111110000000
Q ss_pred -----ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEE
Q 015550 193 -----AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVI 267 (405)
Q Consensus 193 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi 267 (405)
................................ ......+..... .......+..+++|+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i 203 (258)
T d1xkla_ 137 YGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSL------VRPSSLFMEDLS-------KAKYFTDERFGSVKRVYI 203 (258)
T ss_dssp CSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHH------CCCBCCCHHHHH-------HCCCCCTTTGGGSCEEEE
T ss_pred hhhhhhhcccccccHHHHHHHhhhcccHHHHHHhhhh------hhhhhhhhhhhh-------hhhhcccccccccceeEe
Confidence 00001111122222222211111111000000 000000000000 011123345678999999
Q ss_pred eecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhh
Q 015550 268 HGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 268 ~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
+|++|.++|++..+.+++.+ ++++++++++ ||++++|+|+++++.|.+|+++.
T Consensus 204 ~g~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 204 VCTEDKGIPEEFQRWQIDNI-GVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp EETTCTTTTHHHHHHHHHHH-CCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred eecCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 99999999999999999988 8999999998 99999999999999999999864
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=4.5e-30 Score=233.57 Aligned_cols=121 Identities=27% Similarity=0.311 Sum_probs=110.7
Q ss_pred cccc-CCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 19 ALND-NGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 19 ~~~~-~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
++++ ||.+|+|++.|+ ..|+|||+||+++++..|..+...|.+ +|+|+++|+|||
T Consensus 15 ~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~~~~l~~-----------------------~~~vi~~D~rG~ 71 (313)
T d1wm1a_ 15 WLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPE-----------------------RYKVLLFDQRGC 71 (313)
T ss_dssp EEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCTT-----------------------TEEEEEECCTTS
T ss_pred EEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccchHHHHHHhhc-----------------------CCEEEEEeCCCc
Confidence 3544 799999999996 346799999999999999999888876 999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
|.|+.+.....++...+++|+..++++++.++++++|||+||.+++.+|..+|++|.+++++++..
T Consensus 72 G~S~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 72 GRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 137 (313)
T ss_dssp TTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ccccccccccccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccc
Confidence 999887777788999999999999999999999999999999999999999999999999998764
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=7.5e-30 Score=225.99 Aligned_cols=257 Identities=16% Similarity=0.136 Sum_probs=155.3
Q ss_pred cCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 22 ~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
..+.+|+|...+.++|+|||+||++++...|.++++.|.+ .||+|+++|+||||.|+.
T Consensus 2 l~~~~lh~~~~~~~~P~ivllHG~~~~~~~~~~~~~~L~~----------------------~g~~vi~~Dl~G~G~s~~ 59 (264)
T d1r3da_ 2 LLSNQLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLAR----------------------TQCAALTLDLPGHGTNPE 59 (264)
T ss_dssp CCCEEEESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTT----------------------SSCEEEEECCTTCSSCC-
T ss_pred CcCCeEEEcCCCCCCCeEEEeCCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeccccccccc
Confidence 3467899988888888999999999999999999999987 499999999999999976
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHH
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (405)
... ..+.....+.+........+.++++++||||||.+++.+|.++|+++.+++++.+.+...................
T Consensus 60 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (264)
T d1r3da_ 60 RHC-DNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQ 138 (264)
T ss_dssp -------CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHH
T ss_pred ccc-cccchhhhhhhhcccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhh
Confidence 654 2333333444444444455667999999999999999999999999999988876543322221111111110000
Q ss_pred ----HhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhh
Q 015550 182 ----FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (405)
Q Consensus 182 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (405)
........... ..+............ ............ .....................+.+
T Consensus 139 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 204 (264)
T d1r3da_ 139 QWAQRFSQQPIEHVL---------SDWYQQAVFSSLNHE-QRQTLIAQRSAN----LGSSVAHMLLATSLAKQPYLLPAL 204 (264)
T ss_dssp HHHHHHHHSCHHHHH---------HHHTTSGGGTTCCHH-HHHHHHHHHTTS----CHHHHHHHHHHTCGGGCCCCHHHH
T ss_pred hhhhhhhhhhhhhhh---------hhhhhhhhhcccchH-HHHHHHHHHhhh----hhhhhHHhhhhccccccccchhhh
Confidence 00000000000 000000000000000 011111100000 000000000111111122334567
Q ss_pred hhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 258 ~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
..+++|+++|+|++|..+ ..+++. ++++++++++ ||++++|+|+++++.|.+||++..
T Consensus 205 ~~~~~p~l~i~G~~D~~~-----~~~~~~--~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 205 QALKLPIHYVCGEQDSKF-----QQLAES--SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HTCSSCEEEEEETTCHHH-----HHHHHH--HCSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred hccCcceEEEEeCCcHHH-----HHHHhc--CCCeEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 788999999999999643 344443 6889999998 999999999999999999999864
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.96 E-value=7.4e-29 Score=235.96 Aligned_cols=279 Identities=13% Similarity=0.074 Sum_probs=172.5
Q ss_pred cccccCCEEEEEEEcc---CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G---~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
-+++++|++|||.... ++.++|||+||++++...|.++++.|++.... ....|+||++|+|
T Consensus 85 f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~----------------~~~~f~VIaPDLp 148 (394)
T d1qo7a_ 85 FTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTP----------------ETLPFHLVVPSLP 148 (394)
T ss_dssp EEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCT----------------TTCCEEEEEECCT
T ss_pred eEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCC----------------cccceeeeccccc
Confidence 3477899999997543 34568999999999999999999999872100 0013999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
|||.|+.|.....|+..++++|+..+++.++.++.+++|||+||.++..++..+|+++.++++++.........+.....
T Consensus 149 G~G~S~~P~~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 228 (394)
T d1qo7a_ 149 GYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESL 228 (394)
T ss_dssp TSTTSCCCCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGS
T ss_pred ccCCCCCCCCCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccc
Confidence 99999988766789999999999999999999999999999999999999999999999999988765443322221111
Q ss_pred ------HHHHHHHHhhccChhhhhccC-----------ccccc---CHhHHHhhhCCCchhHHHHHHHHhhhhhccccCc
Q 015550 175 ------TLSIAIRFFRAKTPEKRAAVD-----------LDTHY---SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 175 ------~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
..................... ..... ..+..............+............
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 304 (394)
T d1qo7a_ 229 SAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTES---- 304 (394)
T ss_dssp CHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTC----
T ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhccc----
Confidence 111111111100000000000 00000 000001111111111111111111110000
Q ss_pred ccchhhhHHhhhcccC------hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCH
Q 015550 235 YGFDGQIHACWMHKMT------QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT 307 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~------~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p 307 (405)
.......++..... ........++++|+++++|.+|...+++ .+++++....+..++++ ||++++|+|
T Consensus 305 --~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~P 379 (394)
T d1qo7a_ 305 --FPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERP 379 (394)
T ss_dssp --HHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCH
T ss_pred --cchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCH
Confidence 00000011100000 0111223467899999999999887763 45666633456777876 999999999
Q ss_pred HHHHHHHHHHHHhh
Q 015550 308 EEVNQALIDLIKAS 321 (405)
Q Consensus 308 ~~v~~~i~~fl~~~ 321 (405)
+++++.|.+|+++.
T Consensus 380 e~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 380 RELKTDLTAFVEQV 393 (394)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999874
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.95 E-value=1e-27 Score=224.99 Aligned_cols=277 Identities=14% Similarity=0.182 Sum_probs=157.1
Q ss_pred cccCCEEEEEE--EccC-------CCCeEEEEecCCCCCCchhh------hHhhhcCCCCCCCCchhhhccccCCCCCCC
Q 015550 20 LNDNGIKIFYR--TYGR-------GPTKVILITGLAGTHDAWGP------QLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (405)
Q Consensus 20 ~~~~g~~i~y~--~~G~-------~~p~vvllHG~~~~~~~~~~------~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (405)
.+.||+.|... .+++ .+|+|||+||+++++..|.. ++..|.+ +
T Consensus 33 ~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~----------------------~ 90 (377)
T d1k8qa_ 33 VTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILAD----------------------A 90 (377)
T ss_dssp ECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHH----------------------T
T ss_pred EcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHH----------------------C
Confidence 45688766432 2221 34689999999999999954 5566666 5
Q ss_pred CeEEEEecCCCCCCCCCCCCC-------CCCCHH-----HHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCccc
Q 015550 85 GIEVCAFDNRGMGRSSVPVKK-------TEYTTK-----IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERV 152 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~-------~~~~~~-----~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v 152 (405)
||+|+++|+||||.|+.+... ..++++ ++++++..+++.++.++++++||||||++++.+|..+|+++
T Consensus 91 Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~ 170 (377)
T d1k8qa_ 91 GYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLA 170 (377)
T ss_dssp TCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHH
T ss_pred CCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhh
Confidence 999999999999999764321 223443 45556677777889999999999999999999999999999
Q ss_pred ceEEEeccCCCCCCCCcc---chhH--HHHHHHHHhhcc---C---hhhh--hccCccc--------------------c
Q 015550 153 LSLALLNVTGGGFQCCPK---LDLQ--TLSIAIRFFRAK---T---PEKR--AAVDLDT--------------------H 199 (405)
Q Consensus 153 ~~lvl~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~---~---~~~~--~~~~~~~--------------------~ 199 (405)
++++++....+....... .... ............ . .... ....... .
T Consensus 171 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T d1k8qa_ 171 KRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMN 250 (377)
T ss_dssp TTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGG
T ss_pred hhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCccc
Confidence 988887654332211000 0000 000000000000 0 0000 0000000 0
Q ss_pred cCHhHHHhhhCC--CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCH
Q 015550 200 YSQEYLEEYVGS--STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (405)
Q Consensus 200 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~ 277 (405)
........+... ..........+...+...... .+.....................++++++|+|+|+|++|.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~ 329 (377)
T d1k8qa_ 251 LNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQ-AFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADP 329 (377)
T ss_dssp SCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCB-CCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCH
T ss_pred ccHHHhhhhhhcccccchHHHHHHHHHHHhcCcch-hccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCH
Confidence 000000000000 000001111111111111110 01111111111111111122234678899999999999999999
Q ss_pred HHHHHHHHHhCCC-eEEEEcCC-Ccccc---ccCHHHHHHHHHHHHHh
Q 015550 278 CYARRLAEKLYPV-ARMIDLPG-GHLVS---HERTEEVNQALIDLIKA 320 (405)
Q Consensus 278 ~~~~~l~~~l~~~-~~l~~~~g-gH~~~---~e~p~~v~~~i~~fl~~ 320 (405)
+.++++.+++ ++ .+.+++++ ||+.+ .+.+++|.+.|.+||++
T Consensus 330 ~~~~~l~~~l-p~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 330 HDVDLLLSKL-PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHHHHTTC-TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHHC-CCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 9999999988 55 47888998 99733 35689999999999975
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=8e-27 Score=203.47 Aligned_cols=224 Identities=15% Similarity=0.184 Sum_probs=145.8
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
+++|||+||++++...|..+++.|++ +||+|+++|+||||.|..+.. ..+..+..+
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~----------------------~G~~v~~~D~~G~G~s~~~~~--~~~~~~~~~ 66 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLES----------------------KGYTCHAPIYKGHGVPPEELV--HTGPDDWWQ 66 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHH----------------------TTCEEEECCCTTSSSCHHHHT--TCCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEeCCCCcccccccc--ccchhHHHH
Confidence 45699999999999999999999987 499999999999999965443 344445444
Q ss_pred HHH---HHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhh
Q 015550 116 DVI---ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (405)
Q Consensus 116 dl~---~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (405)
++. ..++..+.++++++||||||.+++.++.++|.+ .++++++.... .................
T Consensus 67 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~------ 133 (242)
T d1tqha_ 67 DVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMYI-----KSEETMYEGVLEYAREY------ 133 (242)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSSC-----CCHHHHHHHHHHHHHHH------
T ss_pred HHHHHHhhhhhcccCceEEEEcchHHHHhhhhcccCccc--ccccccccccc-----cchhHHHHHHHHHHHHH------
Confidence 444 445566788999999999999999999998864 45556554211 11111111111111000
Q ss_pred ccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCC
Q 015550 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (405)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D 272 (405)
.... .... .............. ....... ..........+..+++|+|+++|++|
T Consensus 134 ------------~~~~-~~~~---~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~~~~~~p~lii~g~~D 188 (242)
T d1tqha_ 134 ------------KKRE-GKSE---EQIEQEMEKFKQTP----MKTLKAL-----QELIADVRDHLDLIYAPTFVVQARHD 188 (242)
T ss_dssp ------------HHHH-TCCH---HHHHHHHHHHTTSC----CTTHHHH-----HHHHHHHHHTGGGCCSCEEEEEETTC
T ss_pred ------------hhhc-cchh---hhHHHHHhhhhhhc----cchhhcc-----cccccccccccceeccccceeecccC
Confidence 0000 0000 00000000000000 0000000 00111233456778999999999999
Q ss_pred ccCCHHHHHHHHHHh-CCCeEEEEcCC-Ccccccc-CHHHHHHHHHHHHHhh
Q 015550 273 VIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKAS 321 (405)
Q Consensus 273 ~~~~~~~~~~l~~~l-~~~~~l~~~~g-gH~~~~e-~p~~v~~~i~~fl~~~ 321 (405)
.++|++.++.+++.+ .++++++++++ ||+++.+ +++++++.|.+||++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 189 EMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp SSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 999999999999987 36789999998 9999987 5999999999999875
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.1e-26 Score=206.56 Aligned_cols=104 Identities=20% Similarity=0.237 Sum_probs=93.1
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
+||||+||++++...|..+++.|.+.. .+|+|+++|+||||.|..+. .++++++++|
T Consensus 3 ~PvvllHG~~~~~~~~~~~~~~l~~~~--------------------~~~~v~~~d~~G~g~S~~~~---~~~~~~~~~~ 59 (268)
T d1pjaa_ 3 KPVIVVHGLFDSSYSFRHLLEYINETH--------------------PGTVVTVLDLFDGRESLRPL---WEQVQGFREA 59 (268)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHHS--------------------TTCCEEECCSSCSGGGGSCH---HHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHhhC--------------------CCeEEEEeCCCCCCCCCCcc---ccCHHHHHHH
Confidence 459999999999999999999997521 27999999999999998654 5789999999
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCC
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGG 164 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~ 164 (405)
+.+++++++ ++++|+||||||.+|+.+|.++|+ +|+++|+++++..+
T Consensus 60 l~~~l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~~ 107 (268)
T d1pjaa_ 60 VVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMG 107 (268)
T ss_dssp HHHHHHHCT-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTC
T ss_pred HHHHHhccC-CeEEEEccccHHHHHHHHHHHCCccccceEEEECCCCcc
Confidence 999999999 999999999999999999999998 69999999986543
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.93 E-value=3.9e-25 Score=202.26 Aligned_cols=223 Identities=13% Similarity=0.140 Sum_probs=143.9
Q ss_pred ccCCEEEEEEEccC------CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 21 NDNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 21 ~~~g~~i~y~~~G~------~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
..||.+|+++.+-+ .+++||++||++++.+.|.++++.|.+ +||+|+++|+|
T Consensus 11 ~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~----------------------~G~~Vi~~D~r 68 (302)
T d1thta_ 11 VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST----------------------NGFHVFRYDSL 68 (302)
T ss_dssp ETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHT----------------------TTCCEEEECCC
T ss_pred cCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHH----------------------CCCEEEEecCC
Confidence 35788999887643 235799999999999999999999998 59999999999
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCcc
Q 015550 95 GM-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 95 G~-G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
|| |.|+... ..+++.++.+|+.++++.+ +.++++++||||||.+++.+|.. .+++++|+.++...
T Consensus 69 Gh~G~S~g~~--~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~------- 137 (302)
T d1thta_ 69 HHVGLSSGSI--DEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVN------- 137 (302)
T ss_dssp BCC----------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSC-------
T ss_pred CCCCCCCCcc--cCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeeccccc-------
Confidence 98 8887654 3778888999998888776 56799999999999999998864 46899999887631
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCC-CchhHHHHHHHHhhhhhccccCcccchhhhHHhhhccc
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKM 249 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
. ..... ..+....+... ...... .+ .... .............. ....
T Consensus 138 ~-~~~~~---~~~~~~~~~~~-~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~--------------------~~~~ 185 (302)
T d1thta_ 138 L-RDTLE---KALGFDYLSLP-IDELPN-----DL--DFEGHKLGSEVFVRDCFEH--------------------HWDT 185 (302)
T ss_dssp H-HHHHH---HHHSSCGGGSC-GGGCCS-----EE--EETTEEEEHHHHHHHHHHT--------------------TCSS
T ss_pred H-HHHHH---HHHhhccchhh-hhhccc-----cc--cccccchhhHHHHHHHHHh--------------------HHHH
Confidence 1 11111 11110000000 000000 00 0000 00000000110000 0001
Q ss_pred ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHH
Q 015550 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEE 309 (405)
Q Consensus 250 ~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~ 309 (405)
.....+.+.++++|+|+++|++|.++|++.++++++++. +++++++++| ||.+. |+++.
T Consensus 186 ~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~ 246 (302)
T d1thta_ 186 LDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVV 246 (302)
T ss_dssp HHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHH
T ss_pred HHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChHH
Confidence 112345677899999999999999999999999999873 5789999999 89864 55544
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.91 E-value=1.2e-22 Score=187.13 Aligned_cols=279 Identities=14% Similarity=0.109 Sum_probs=172.7
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhh-----hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP-----QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~-----~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
.++..+|.|+++|. +.+.||++|++.+++..+.. +...|.....++|+ ..|.||++
T Consensus 20 ~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt---------------~kyfVI~~ 84 (357)
T d2b61a1 20 KLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDT---------------DRYFFISS 84 (357)
T ss_dssp EECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEET---------------TTCEEEEE
T ss_pred ccCCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCC---------------CceEEEEe
Confidence 45789999999996 34689999999998765321 22334444445555 48999999
Q ss_pred cCCCCCCCCCCCC-------------CCCCCHHHHHHHHHHHHHHhCCccE-EEEEEChhHHHHHHHHHhCCcccceEEE
Q 015550 92 DNRGMGRSSVPVK-------------KTEYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLAAMVPERVLSLAL 157 (405)
Q Consensus 92 D~~G~G~S~~~~~-------------~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 157 (405)
|..|.|.++.++. ...+++.|+++....++++||++++ .|+|.||||+.|+++|.++|++|+++|.
T Consensus 85 n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~ 164 (357)
T d2b61a1 85 NVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVN 164 (357)
T ss_dssp CCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEE
T ss_pred cccCCccccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcc
Confidence 9999876532221 1246899999999999999999998 5679999999999999999999999999
Q ss_pred eccCCCCCCCCccchhHHHHH-HHHHhhccChhhhhc-----------------cCcccccCHhHHHhhhCCCchh----
Q 015550 158 LNVTGGGFQCCPKLDLQTLSI-AIRFFRAKTPEKRAA-----------------VDLDTHYSQEYLEEYVGSSTRR---- 215 (405)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~---- 215 (405)
+++..... + ....+.. ....+... +....- .........+.++..+......
T Consensus 165 i~~~a~~s---~--~~~~~~~~~~~aI~~D-p~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~ 238 (357)
T d2b61a1 165 LCSSIYFS---A--EAIGFNHVMRQAVIND-PNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSF 238 (357)
T ss_dssp ESCCSSCC---H--HHHHHHHHHHHHHHTS-TTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCT
T ss_pred cccccccc---h--hHHHHHHHHHHHHHcC-CCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhcccccccccc
Confidence 98763110 0 0011111 11111110 000000 0000011122222222111000
Q ss_pred ---HHHHHHHHhhhhhc--cccCcccchhhhHHhhhccc---ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh
Q 015550 216 ---AILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL 287 (405)
Q Consensus 216 ---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l 287 (405)
....+.|.+..... .......+.........+.. ..+..+.+++|++|+|+|..+.|.+.|++..+++++.+
T Consensus 239 ~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l 318 (357)
T d2b61a1 239 WGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLL 318 (357)
T ss_dssp TSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHH
Confidence 00112222211110 00011111111222212221 13445678999999999999999999999998888877
Q ss_pred ---CCCeEEEEcCC--CccccccCHHHHHHHHHHHHHh
Q 015550 288 ---YPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 288 ---~~~~~l~~~~g--gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+++++++++ ||..++-+.+++.+.|.+||+.
T Consensus 319 ~~~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 319 EQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HHTTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred HhcCCCeEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 34679999996 9999988999999999999975
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.91 E-value=7.8e-23 Score=189.79 Aligned_cols=279 Identities=15% Similarity=0.112 Sum_probs=172.1
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
.+++.+|.|+++|. +.++||++|++.+++..- .+...|....+++|+ ..|.||++|..|.
T Consensus 25 ~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~-~WW~~liG~g~alDt---------------~kyfVI~~n~lG~ 88 (376)
T d2vata1 25 ILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVT-SWWPTLFGQGRAFDT---------------SRYFIICLNYLGS 88 (376)
T ss_dssp EEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGG-GTCGGGBSTTSSBCT---------------TTCEEEEECCTTC
T ss_pred CcCCceEEEEeecccCCCCCCEEEEcCCCcCCcccc-ccHHHhCCCCCccCc---------------cceEEEEeccCCC
Confidence 34678999999996 446799999999888642 222345455556666 4999999999998
Q ss_pred CCCCCCCC---------------CCCCCHHHHHHHHHHHHHHhCCccE-EEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 97 GRSSVPVK---------------KTEYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 97 G~S~~~~~---------------~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
|.++.++. ...+++.|+++....++++||++++ .|+|.||||+.|+++|..+|++|+++|.+++
T Consensus 89 ~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~ 168 (376)
T d2vata1 89 PFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIAT 168 (376)
T ss_dssp SSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESC
T ss_pred CcCCCCCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhccccc
Confidence 76532211 1246899999999999999999997 4789999999999999999999999999998
Q ss_pred CCCCCCCCccchhHHHHHHHHHhhccC------------hh--h--hhccCcccccCHhHHHhhhCCCc----hh-----
Q 015550 161 TGGGFQCCPKLDLQTLSIAIRFFRAKT------------PE--K--RAAVDLDTHYSQEYLEEYVGSST----RR----- 215 (405)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~--~--~~~~~~~~~~~~~~~~~~~~~~~----~~----- 215 (405)
..... + ............+.... +. . ..........+.+.+++.+.... .+
T Consensus 169 ~~~~s---~-~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~ 244 (376)
T d2vata1 169 SCRQS---G-WCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQ 244 (376)
T ss_dssp CSBCC---H-HHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC--------
T ss_pred ccccc---h-HHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccc
Confidence 74211 0 00000000111111000 00 0 00000001111222222211000 00
Q ss_pred --------------------HHHHHHHHhhhhhcc--ccCcccchhhhHHhhhcccC----hhhhhhhhhcCCcEEEEee
Q 015550 216 --------------------AILYQEYVKGISATG--MQSNYGFDGQIHACWMHKMT----QKDIQTIRSAGFLVSVIHG 269 (405)
Q Consensus 216 --------------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~Pvlvi~G 269 (405)
....+.|.......- ......+.......-.+... .+..+.++.|++|+|+|.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~ 324 (376)
T d2vata1 245 DAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICA 324 (376)
T ss_dssp -------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEEC
T ss_pred hhhhcccccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEe
Confidence 001122222111000 00000111111111122221 2345668999999999999
Q ss_pred cCCccCCHHHHHHHHHHhCCCeEEEEcCC--CccccccCHHHHHHHHHHHHHh
Q 015550 270 RHDVIAQICYARRLAEKLYPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 270 ~~D~~~~~~~~~~l~~~l~~~~~l~~~~g--gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
+.|.+.|++..+++++.+ ++++++++++ ||..++.+++.+.+.|.+||++
T Consensus 325 ~sD~lFPp~~~~e~a~~l-~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 325 RSDGLYSFDEHVEMGRSI-PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp TTCSSSCHHHHHHHHHHS-TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred CcccCcCHHHHHHHHHhc-CCCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 999999999999999987 8999999995 9988888899999999999964
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.90 E-value=2.2e-22 Score=188.18 Aligned_cols=226 Identities=16% Similarity=0.120 Sum_probs=151.9
Q ss_pred cccCCEEEEEEEccC---C-CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 20 LNDNGIKIFYRTYGR---G-PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~---~-~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+..+|..|....+-+ + .|+||++||+.++.+.|..+...|.+ +||.|+++|+||
T Consensus 111 ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~----------------------~G~~vl~~D~~G 168 (360)
T d2jbwa1 111 LVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLD----------------------RGMATATFDGPG 168 (360)
T ss_dssp EEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHH----------------------TTCEEEEECCTT
T ss_pred cCcCCcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHHh----------------------cCCEEEEEcccc
Confidence 556899988766543 3 36899999999999888888888887 499999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccch
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (405)
||.|..... ...+.+..+..+.+++... +.++|.++||||||.+|+.+|...| +|+++|.+++...... ....
T Consensus 169 ~G~s~~~~~-~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~--~~~~ 244 (360)
T d2jbwa1 169 QGEMFEYKR-IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDY--WDLE 244 (360)
T ss_dssp SGGGTTTCC-SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTT--GGGS
T ss_pred ccccCcccc-ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHH--Hhhh
Confidence 999975443 2345666666666666655 3468999999999999999999887 7999999887531100 0000
Q ss_pred hHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChh
Q 015550 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (405)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (405)
....... ............ ........ .+
T Consensus 245 ~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~~~-------------------------~~ 273 (360)
T d2jbwa1 245 TPLTKES-------------------------WKYVSKVDTLEE-ARLHVHAA-------------------------LE 273 (360)
T ss_dssp CHHHHHH-------------------------HHHHTTCSSHHH-HHHHHHHH-------------------------TC
T ss_pred hhhhhHH-------------------------HHHhccCCchHH-HHHHHHhh-------------------------cc
Confidence 0000000 000000000000 00000000 01
Q ss_pred hhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 253 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
....+.+++||+|+++|++|. +|++.++++.+.+. ++.+++++++ +|. ..+.+.+....|.+||.+.-..
T Consensus 274 ~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~-~~~~~~~~~~~i~dWl~~~L~~ 345 (360)
T d2jbwa1 274 TRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHC-CHNLGIRPRLEMADWLYDVLVA 345 (360)
T ss_dssp CTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGG-GGGGTTHHHHHHHHHHHHHHTS
T ss_pred hhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcC-CCcChHHHHHHHHHHHHHHhcc
Confidence 123457889999999999998 58899999999873 3567778887 785 4566778888899999887543
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.89 E-value=5.1e-22 Score=171.32 Aligned_cols=169 Identities=20% Similarity=0.236 Sum_probs=127.5
Q ss_pred eEEEEecC---CCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 38 KVILITGL---AGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 38 ~vvllHG~---~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.+|++|+. +++.+. +..+++.|.+ +||.|+.||+||+|.|..... +...
T Consensus 37 ~~vl~Hph~~~GG~~~~~~~~~la~~l~~----------------------~G~~vlrfd~RG~G~S~g~~~----~~~~ 90 (218)
T d2fuka1 37 TAIVCHPLSTEGGSMHNKVVTMAARALRE----------------------LGITVVRFNFRSVGTSAGSFD----HGDG 90 (218)
T ss_dssp EEEEECSCTTTTCSTTCHHHHHHHHHHHT----------------------TTCEEEEECCTTSTTCCSCCC----TTTH
T ss_pred EEEEECCCCCCCcCCCChHHHHHHHHHHH----------------------cCCeEEEeecCCCccCCCccC----cCcc
Confidence 56888854 343332 5567788887 599999999999999987543 2234
Q ss_pred HHHHHHHHHHHh----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccCh
Q 015550 113 MAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (405)
Q Consensus 113 ~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (405)
..+|+.++++.+ +.++++++||||||.+++.+|.+. +++++|+++++....
T Consensus 91 ~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~----------------------- 145 (218)
T d2fuka1 91 EQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW----------------------- 145 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-----------------------
T ss_pred hHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch-----------------------
Confidence 556666655544 567899999999999999998874 588999999752100
Q ss_pred hhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEe
Q 015550 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (405)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~ 268 (405)
.+ ....+.+|+|+||
T Consensus 146 -----------------------------------------------~~------------------~~~~~~~P~Lvi~ 160 (218)
T d2fuka1 146 -----------------------------------------------DF------------------SDVQPPAQWLVIQ 160 (218)
T ss_dssp -----------------------------------------------CC------------------TTCCCCSSEEEEE
T ss_pred -----------------------------------------------hh------------------hccccccceeeEe
Confidence 00 0012357999999
Q ss_pred ecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 269 G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
|++|.++|++.++++++.+....++++++| +|++ ..+.+++.+.+.+|+++...
T Consensus 161 G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f-~~~~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 161 GDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFF-HRKLIDLRGALQHGVRRWLP 215 (218)
T ss_dssp ETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTC-TTCHHHHHHHHHHHHGGGCS
T ss_pred cCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCC-CCCHHHHHHHHHHHHHHhcC
Confidence 999999999999999988867789999999 9965 45667899999999987653
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.5e-23 Score=185.13 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=83.5
Q ss_pred cccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCC
Q 015550 20 LNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR 98 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~ 98 (405)
++.+|..|.+...++ .+++|||+||++++...|..+++.| +++|+++|+||+|.
T Consensus 8 ~~~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~~~~l~~~L-------------------------~~~v~~~d~~g~~~ 62 (286)
T d1xkta_ 8 VNPEGPTLMRLNSVQSSERPLFLVHPIEGSTTVFHSLASRL-------------------------SIPTYGLQCTRAAP 62 (286)
T ss_dssp CCTTSCSEEECCCCCCCSCCEEEECCTTCCCGGGHHHHHTC-------------------------SSCEEEECCCTTSC
T ss_pred cCCCCCEEEEecCCCCCCCeEEEECCCCccHHHHHHHHHHc-------------------------CCeEEEEeCCCCCC
Confidence 455676777766654 3346999999999999999998877 46799999999998
Q ss_pred CCCCCCCCCCCHHHHHHHHHH-HHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEecc
Q 015550 99 SSVPVKKTEYTTKIMAKDVIA-LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (405)
Q Consensus 99 S~~~~~~~~~~~~~~~~dl~~-~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (405)
|+ ++++++++..+ +.+..+.++++|+||||||.+|+.+|.++|+++.++++++.
T Consensus 63 ~~--------~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 63 LD--------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp CS--------CHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred CC--------CHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 74 57778887764 45556778999999999999999999999999988876654
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=3.6e-22 Score=168.83 Aligned_cols=178 Identities=17% Similarity=0.228 Sum_probs=126.2
Q ss_pred eEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHH
Q 015550 38 KVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (405)
Q Consensus 38 ~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (405)
.||++||++++... |..+.+.|.+ +||+|+++|+||+|.+ ..+++++
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~----------------------~G~~v~~~d~p~~~~~---------~~~~~~~ 51 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLA----------------------DGVQADILNMPNPLQP---------RLEDWLD 51 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHH----------------------TTCEEEEECCSCTTSC---------CHHHHHH
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHh----------------------CCCEEEEeccCCCCcc---------hHHHHHH
Confidence 59999999998654 5667788887 5999999999999865 3666777
Q ss_pred HHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccC
Q 015550 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVD 195 (405)
Q Consensus 116 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
.+...++..+ .+++++||||||.+++.++.++|+.....+++...+.... .+. .
T Consensus 52 ~l~~~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~-~~~-------------------~----- 105 (186)
T d1uxoa_ 52 TLSLYQHTLH-ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKS-LPT-------------------L----- 105 (186)
T ss_dssp HHHTTGGGCC-TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSC-CTT-------------------C-----
T ss_pred HHHHHHhccC-CCcEEEEechhhHHHHHHHHhCCccceeeEEeeccccccc-chh-------------------h-----
Confidence 7766665544 7899999999999999999999876544444443321000 000 0
Q ss_pred cccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccC
Q 015550 196 LDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIA 275 (405)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~ 275 (405)
.....+.. ..........+.+|+++|+|++|.++
T Consensus 106 -------~~~~~~~~---------------------------------------~~~~~~~~~~~~~p~lvi~g~~D~~v 139 (186)
T d1uxoa_ 106 -------QMLDEFTQ---------------------------------------GSFDHQKIIESAKHRAVIASKDDQIV 139 (186)
T ss_dssp -------GGGGGGTC---------------------------------------SCCCHHHHHHHEEEEEEEEETTCSSS
T ss_pred -------hhhhhhhc---------------------------------------ccccccccccCCCCEEEEecCCCCCC
Confidence 00000000 00011122345689999999999999
Q ss_pred CHHHHHHHHHHhCCCeEEEEcCC-Ccccccc---CHHHHHHHHHHHHHh
Q 015550 276 QICYARRLAEKLYPVARMIDLPG-GHLVSHE---RTEEVNQALIDLIKA 320 (405)
Q Consensus 276 ~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e---~p~~v~~~i~~fl~~ 320 (405)
|++.++.+++.+ +++++++++ ||+...+ ...++.+.|.+|+.+
T Consensus 140 p~~~~~~l~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 140 PFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp CHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHc--CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 999999999986 689999998 9987654 345889999999864
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.88 E-value=1.6e-22 Score=182.93 Aligned_cols=216 Identities=14% Similarity=0.067 Sum_probs=144.9
Q ss_pred CCCCeEEEEecC--CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC-CCCCH
Q 015550 34 RGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK-TEYTT 110 (405)
Q Consensus 34 ~~~p~vvllHG~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~-~~~~~ 110 (405)
.+.|+|+|+||+ +++...|.++++.|.. +++|+++|+||||.|+..... ...++
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~-----------------------~~~V~al~~pG~~~~~~~~~~~~~~s~ 114 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQE-----------------------ERDFLAVPLPGYGTGTGTGTALLPADL 114 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTT-----------------------TCCEEEECCTTCCBC---CBCCEESSH
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCC-----------------------CceEEEEeCCCCCCCCCCccccccCCH
Confidence 356789999995 4667889999999998 899999999999998754431 23589
Q ss_pred HHHHHHHHH-HHHHhCCccEEEEEEChhHHHHHHHHHhC----CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhc
Q 015550 111 KIMAKDVIA-LMDHLGWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRA 185 (405)
Q Consensus 111 ~~~~~dl~~-~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (405)
+++++++.+ +.+..+..+++|+||||||.+|+.+|.+. +++|.++|++++........ ..............
T Consensus 115 ~~~a~~~~~~i~~~~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~---~~~~~~~~~~~~~~ 191 (283)
T d2h7xa1 115 DTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP---IEVWSRQLGEGLFA 191 (283)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHH---HHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccc---hhhhhhhhHHHhhc
Confidence 999998765 66778888999999999999999999875 45799999999864221100 00000000000000
Q ss_pred cChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEE
Q 015550 186 KTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (405)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (405)
.. ........+.. ...+.+.+ .......+++|++
T Consensus 192 --------~~-~~~~~~~~l~a-----------~~~~~~~~--------------------------~~~~~~~~~~Pvl 225 (283)
T d2h7xa1 192 --------GE-LEPMSDARLLA-----------MGRYARFL--------------------------AGPRPGRSSAPVL 225 (283)
T ss_dssp --------TC-SSCCCHHHHHH-----------HHHHHHHH--------------------------HSCCCCCCCSCEE
T ss_pred --------cc-ccccccHHHHH-----------HHHHHHHH--------------------------hhccccccCCCeE
Confidence 00 00000000000 00000000 0011245789999
Q ss_pred EEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccc-cCHHHHHHHHHHHHHhh
Q 015550 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIKAS 321 (405)
Q Consensus 266 vi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~-e~p~~v~~~i~~fl~~~ 321 (405)
+|+|++|..++.+....+.+.+....++++++|||+.++ ++++++++.|.+||++.
T Consensus 226 ~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 226 LVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp EEEESSCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcCCCcccccCCHHHHHHHHHHHHHhc
Confidence 999999999988877777776545578999999998665 57999999999999875
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.88 E-value=1.1e-21 Score=181.08 Aligned_cols=280 Identities=17% Similarity=0.158 Sum_probs=169.2
Q ss_pred ccCCEEEEEEEccC----CCCeEEEEecCCCCCCc--h-------hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeE
Q 015550 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDA--W-------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (405)
Q Consensus 21 ~~~g~~i~y~~~G~----~~p~vvllHG~~~~~~~--~-------~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 87 (405)
.+++.+|.|+++|. +.+.||++|++.+++.. + .-+...|.....++|+ ..|.
T Consensus 23 ~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt---------------~~yf 87 (362)
T d2pl5a1 23 VLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT---------------NQYF 87 (362)
T ss_dssp EESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET---------------TTCE
T ss_pred CcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCc---------------cccE
Confidence 34678999999995 44689999999988632 1 0122334443444555 4899
Q ss_pred EEEecCCCCCCCCCCCC-------------CCCCCHHHHHHHHHHHHHHhCCccEE-EEEEChhHHHHHHHHHhCCcccc
Q 015550 88 VCAFDNRGMGRSSVPVK-------------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVL 153 (405)
Q Consensus 88 Vi~~D~~G~G~S~~~~~-------------~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~ 153 (405)
||++|..|.|.|+.++. ....++.|+++....++++||++++. |+|.||||+.|+++|.+||++|+
T Consensus 88 VI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~ 167 (362)
T d2pl5a1 88 IICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLS 167 (362)
T ss_dssp EEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEE
T ss_pred EEeeccccCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhh
Confidence 99999999987754321 12357889999999999999999987 67999999999999999999999
Q ss_pred eEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhcc----------------CcccccCHhHHHhhhCCCchhHH
Q 015550 154 SLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV----------------DLDTHYSQEYLEEYVGSSTRRAI 217 (405)
Q Consensus 154 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 217 (405)
++|.+++..... + ............+... +...... ........++++..+.....+..
T Consensus 168 ~~v~ia~sa~~s---~-~~~~~~~~~~~aI~~D-p~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~ 242 (362)
T d2pl5a1 168 NCIVMASTAEHS---A-MQIAFNEVGRQAILSD-PNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGN 242 (362)
T ss_dssp EEEEESCCSBCC---H-HHHHHHHHHHHHHHTS-TTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSC
T ss_pred hhcccccccccC---H-HHHHHHHHHHHHHhcC-CccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhcccccccc
Confidence 999999763110 0 0111111111111111 1000000 00001112222222211110000
Q ss_pred HHHHH--H-hhhhhccccCcccchhh-----hHHhhhccc--ChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh
Q 015550 218 LYQEY--V-KGISATGMQSNYGFDGQ-----IHACWMHKM--TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL 287 (405)
Q Consensus 218 ~~~~~--~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l 287 (405)
..... + ..+...+......++.. ....-.+.. ..+..+.+++|++|+|+|..+.|.+.|++..+++++.+
T Consensus 243 ~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l 322 (362)
T d2pl5a1 243 ILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSL 322 (362)
T ss_dssp TTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHH
Confidence 00000 0 00000000111111111 111111111 12334668999999999999999999999999999988
Q ss_pred ---CCCeEEEEcCC--CccccccCHHHHHHHHHHHHHh
Q 015550 288 ---YPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 288 ---~~~~~l~~~~g--gH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..+++++++++ ||..++.+.+++.+.|.+||+.
T Consensus 323 ~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 323 EAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp HHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HhCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 23457888986 9999999999999999999963
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=2.8e-22 Score=168.66 Aligned_cols=171 Identities=16% Similarity=0.180 Sum_probs=136.5
Q ss_pred CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHH
Q 015550 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (405)
Q Consensus 37 p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (405)
+||||+||++++...|..+++.|.+ +||.|+.+|.+|++.+.... ..+.++++++
T Consensus 3 ~PVv~vHG~~~~~~~~~~l~~~l~~----------------------~g~~~~~~~~~~~~~~~~~~---~~~~~~l~~~ 57 (179)
T d1ispa_ 3 NPVVMVHGIGGASFNFAGIKSYLVS----------------------QGWSRDKLYAVDFWDKTGTN---YNNGPVLSRF 57 (179)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHH----------------------TTCCGGGEEECCCSCTTCCH---HHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHH----------------------cCCeEEEEecCCcccccccc---chhhhhHHHH
Confidence 4599999999999999999999988 49999999999999886443 3467778888
Q ss_pred HHHHHHHhCCccEEEEEEChhHHHHHHHHHhC--CcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhcc
Q 015550 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (405)
Q Consensus 117 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
+.+++++++.++++++||||||.++..++.++ |++|+++|+++++..+... .
T Consensus 58 i~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~--------------------------~ 111 (179)
T d1ispa_ 58 VQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------------------K 111 (179)
T ss_dssp HHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS--------------------------B
T ss_pred HHHHHHhcCCceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchh--------------------------h
Confidence 99999999999999999999999999999887 6789999999976211000 0
Q ss_pred CcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCcc
Q 015550 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (405)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~ 274 (405)
. +. ......++|++.|+|+.|.+
T Consensus 112 ~------------------------------l~---------------------------~~~~~~~~~~~~i~~~~D~~ 134 (179)
T d1ispa_ 112 A------------------------------LP---------------------------GTDPNQKILYTSIYSSADMI 134 (179)
T ss_dssp C------------------------------CC---------------------------CSCTTCCCEEEEEEETTCSS
T ss_pred h------------------------------cC---------------------------CcccccCceEEEEEecCCcc
Confidence 0 00 00012357999999999999
Q ss_pred CCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 275 ~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+++..+ ++ +.++.+.+++ +|.....+| ++.+.|.+||+...
T Consensus 135 v~~~~~-----~l-~~~~~~~~~~~~H~~l~~~~-~v~~~i~~~L~~~~ 176 (179)
T d1ispa_ 135 VMNYLS-----RL-DGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGGG 176 (179)
T ss_dssp SCHHHH-----CC-BTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred cCchhh-----cC-CCceEEEECCCCchhhccCH-HHHHHHHHHHhccC
Confidence 998654 24 7888888898 999888887 78999999997644
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=1.3e-22 Score=177.09 Aligned_cols=217 Identities=12% Similarity=0.057 Sum_probs=131.5
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVP 102 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~ 102 (405)
||.+.-+...+..+++|||+||++++...|.++++.|. +|.|+++|++|+|.
T Consensus 4 ~g~~~~~~~~~~~~~~l~~lhg~~g~~~~~~~la~~L~------------------------~~~v~~~~~~g~~~---- 55 (230)
T d1jmkc_ 4 DGLQDVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLP------------------------SYKLCAFDFIEEED---- 55 (230)
T ss_dssp CSSTTEEEESTTCSEEEEEECCTTCCGGGGHHHHHHCT------------------------TEEEEEECCCCSTT----
T ss_pred CCCceEEeecCCCCCeEEEEcCCCCCHHHHHHHHHHCC------------------------CCEEeccCcCCHHH----
Confidence 34333344444445679999999999999999999994 79999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCccEEEEEEChhHHHHHHHHHhCCcccceE---EEeccCCCCCCCCccchhHHHHH
Q 015550 103 VKKTEYTTKIMAKDVIALMDHL-GWKQAHVFGHSMGAMIACKLAAMVPERVLSL---ALLNVTGGGFQCCPKLDLQTLSI 178 (405)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l---vl~~~~~~~~~~~~~~~~~~~~~ 178 (405)
.++++.+.++++ +.++++|+||||||.+|+.+|.++|+++..+ +.+.+....... .....
T Consensus 56 ----------~a~~~~~~i~~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~--~~~~~---- 119 (230)
T d1jmkc_ 56 ----------RLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS--DLDGR---- 119 (230)
T ss_dssp ----------HHHHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC-----------
T ss_pred ----------HHHHHHHHHHHhCCCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchh--hhhhh----
Confidence 345555555554 5678999999999999999999887665444 444433211100 00000
Q ss_pred HHHHhhccChhhhhccCcccccCHhHHHhhhCC-Cc-hhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhh
Q 015550 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-ST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQT 256 (405)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
..... ...+...... .. ........+..... ..... ......
T Consensus 120 ----~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-------~~~~~~ 163 (230)
T d1jmkc_ 120 ----TVESD--------------VEALMNVNRDNEALNSEAVKHGLKQKTH-----------AFYSY-------YVNLIS 163 (230)
T ss_dssp -------CC--------------HHHHHHHTTTCSGGGSHHHHHHHHHHHH-----------HHHHH-------HHHCCC
T ss_pred ----hhhhh--------------hhhhhhccccccccccHHHHHHHHHHHH-----------HHHHh-------hhcccc
Confidence 00000 0000000000 00 00000001000000 00000 011123
Q ss_pred hhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccccCH--HHHHHHHHHHHHh
Q 015550 257 IRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERT--EEVNQALIDLIKA 320 (405)
Q Consensus 257 l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~e~p--~~v~~~i~~fl~~ 320 (405)
...+++|+++|+|++|..++.. ...+.+...++.++++++|||+.++++| +++++.|.+||++
T Consensus 164 ~~~i~~p~l~i~g~~D~~~~~~-~~~w~~~~~~~~~~~~i~g~H~~ml~~~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 164 TGQVKADIDLLTSGADFDIPEW-LASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp CSCBSSEEEEEECSSCCCCCTT-EECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred cccccCcceeeeecCCcccchh-HHHHHHhccCCcEEEEEcCCChhhcCCccHHHHHHHHHHHHhh
Confidence 4567899999999999998854 3344554556789999999999888765 8999999999975
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=2.6e-20 Score=163.43 Aligned_cols=211 Identities=17% Similarity=0.117 Sum_probs=135.8
Q ss_pred cccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 20 LNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
+++.|..+.+...+.++|+||++||++++.+.|..+++.|++ +||.|+++|+||||.|
T Consensus 8 ~~l~g~~~~~~~p~~~~~~vl~lHG~~~~~~~~~~~~~~la~----------------------~G~~V~~~D~~g~g~s 65 (238)
T d1ufoa_ 8 LTLAGLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAE----------------------RGFLLLAFDAPRHGER 65 (238)
T ss_dssp EEETTEEEEEEEESSCCEEEEEECCTTCCHHHHHHTSTTTGG----------------------GTEEEEECCCTTSTTS
T ss_pred EEECCEEEEecCCCCCCeEEEEeCCCCCCHHHHHHHHHHHHH----------------------CCCEEEEecCCCCCCC
Confidence 667898888888777788999999999999999988888887 5999999999999999
Q ss_pred CCCCCCCCC--CHHHHHHH-------HHHHHH---HhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 100 SVPVKKTEY--TTKIMAKD-------VIALMD---HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 100 ~~~~~~~~~--~~~~~~~d-------l~~~l~---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
..+...... ......++ +..++. .....++.++|||+||.+++.++..+|+....+.+++.......
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~- 144 (238)
T d1ufoa_ 66 EGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL- 144 (238)
T ss_dssp SCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-
T ss_pred cccccccccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeeeecccccc-
Confidence 765432211 12222222 222222 22346899999999999999999999854444444433211000
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
+.. ........ ... .+.
T Consensus 145 -~~~-------------------------~~~~~~~~--------------~~~-~~~---------------------- 161 (238)
T d1ufoa_ 145 -PQG-------------------------QVVEDPGV--------------LAL-YQA---------------------- 161 (238)
T ss_dssp -CTT-------------------------CCCCCHHH--------------HHH-HHS----------------------
T ss_pred -ccc-------------------------cccccccc--------------cch-hhh----------------------
Confidence 000 00000000 000 000
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC-----CCeEEEEcCC-CccccccCHHHHHHHHHHHHH
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-----PVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~-----~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~ 319 (405)
..........++|+|++||++|.++|++.+.++++.+. .+.+++.++| ||...-+..+++.+.+.+||+
T Consensus 162 ---~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 162 ---PPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp ---CGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred ---hhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 00001123345899999999999999999999998762 2467888899 998765544455555555554
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=4.5e-20 Score=168.61 Aligned_cols=226 Identities=13% Similarity=0.027 Sum_probs=139.9
Q ss_pred ccCCEEEEEEEc---cCCC-CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCC
Q 015550 21 NDNGIKIFYRTY---GRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (405)
Q Consensus 21 ~~~g~~i~y~~~---G~~~-p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~ 96 (405)
..||.+|+.... +.++ |+||++||++++...|..++..|++ +||.|+++|+|||
T Consensus 63 ~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~----------------------~Gy~vi~~D~rG~ 120 (318)
T d1l7aa_ 63 SFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWAL----------------------HGYATFGMLVRGQ 120 (318)
T ss_dssp EGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHH----------------------TTCEEEEECCTTT
T ss_pred CCCCcEEEEEEEecCCCCCceEEEEecCCCCCccchHHHHHHHHH----------------------CCCEEEEEeeCCC
Confidence 347877764333 3333 6899999999999999999999987 4999999999999
Q ss_pred CCCCCCCCCC----------------CCCHHHHHHHHHHHHHHh---C---CccEEEEEEChhHHHHHHHHHhCCcccce
Q 015550 97 GRSSVPVKKT----------------EYTTKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVLS 154 (405)
Q Consensus 97 G~S~~~~~~~----------------~~~~~~~~~dl~~~l~~l---~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~ 154 (405)
|.|..+.... .........|....++.+ . ..++.++|+|+||..++..+...+ ++.+
T Consensus 121 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~-~~~~ 199 (318)
T d1l7aa_ 121 QRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSD-IPKA 199 (318)
T ss_dssp SSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCS-CCSE
T ss_pred CCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCc-ccce
Confidence 9997654311 111223344444444433 2 246899999999999999999886 5677
Q ss_pred EEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCc
Q 015550 155 LALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (405)
Q Consensus 155 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
++...+... ... .......... ......................
T Consensus 200 ~~~~~~~~~--------~~~---~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-------------- 243 (318)
T d1l7aa_ 200 AVADYPYLS--------NFE---RAIDVALEQP-----------YLEINSFFRRNGSPETEVQAMK-------------- 243 (318)
T ss_dssp EEEESCCSC--------CHH---HHHHHCCSTT-----------TTHHHHHHHHSCCHHHHHHHHH--------------
T ss_pred EEEeccccc--------cHH---HHhhcccccc-----------cchhhhhhhccccccccccccc--------------
Confidence 666554321 000 0000000000 0000000000000000000000
Q ss_pred ccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-CccccccCHHHHHHH
Q 015550 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (405)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e~p~~v~~~ 313 (405)
..........+.++++|+|+++|++|.++|++.+..+++++..+++++++++ ||... +++.+.
T Consensus 244 ------------~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~----~~~~~~ 307 (318)
T d1l7aa_ 244 ------------TLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYI----PAFQTE 307 (318)
T ss_dssp ------------HHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCC----HHHHHH
T ss_pred ------------cccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCc----HHHHHH
Confidence 0001122344577899999999999999999999999999866789999998 99654 455555
Q ss_pred HHHHHHhh
Q 015550 314 LIDLIKAS 321 (405)
Q Consensus 314 i~~fl~~~ 321 (405)
+.+||++.
T Consensus 308 ~~~fl~~~ 315 (318)
T d1l7aa_ 308 KLAFFKQI 315 (318)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666654
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.85 E-value=1.2e-21 Score=151.88 Aligned_cols=98 Identities=20% Similarity=0.311 Sum_probs=85.3
Q ss_pred cccccCCEEEEEEEccCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.+++++|.+|+|.+.|+|+| |||+||. |..+.+.|.+ +|+|+++|+||||
T Consensus 4 ~~~~~~G~~l~y~~~G~G~p-vlllHG~------~~~w~~~L~~-----------------------~yrvi~~DlpG~G 53 (122)
T d2dsta1 4 GYLHLYGLNLVFDRVGKGPP-VLLVAEE------ASRWPEALPE-----------------------GYAFYLLDLPGYG 53 (122)
T ss_dssp EEEEETTEEEEEEEECCSSE-EEEESSS------GGGCCSCCCT-----------------------TSEEEEECCTTST
T ss_pred eEEEECCEEEEEEEEcCCCc-EEEEecc------cccccccccC-----------------------CeEEEEEeccccC
Confidence 46889999999999999875 9999984 3334455655 9999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC
Q 015550 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
.|+.+ .++.+++++++.++++++++++++++||||||.+++.+++..+
T Consensus 54 ~S~~p----~~s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~ 101 (122)
T d2dsta1 54 RTEGP----RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGL 101 (122)
T ss_dssp TCCCC----CCCHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTC
T ss_pred CCCCc----ccccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhcc
Confidence 99754 5789999999999999999999999999999999999999754
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.81 E-value=3.4e-19 Score=158.68 Aligned_cols=225 Identities=16% Similarity=0.161 Sum_probs=144.3
Q ss_pred cccccCCEEEEEEEccC----C-CCeEEEEecC--CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 18 AALNDNGIKIFYRTYGR----G-PTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~----~-~p~vvllHG~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
.+.+.||.+|....+-+ + .|+||++||. +.....|...+..|++ +||.|++
T Consensus 16 ~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~----------------------~G~~v~~ 73 (260)
T d2hu7a2 16 WVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAA----------------------AGFHVVM 73 (260)
T ss_dssp EEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHH----------------------HTCEEEE
T ss_pred EEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHh----------------------hcccccc
Confidence 34567888886544322 2 2579999984 3445667788888877 5999999
Q ss_pred ecCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHH----hCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCC
Q 015550 91 FDNRGMGRSSVPVK---KTEYTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (405)
Q Consensus 91 ~D~~G~G~S~~~~~---~~~~~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (405)
+|+||++.+..... ...+ .....+|+.++++. ....++.++|+|+||.+++.++..+|+.+++++..++..
T Consensus 74 ~d~r~~~~~g~~~~~~~~~~~-~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~- 151 (260)
T d2hu7a2 74 PNYRGSTGYGEEWRLKIIGDP-CGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVV- 151 (260)
T ss_dssp ECCTTCSSSCHHHHHTTTTCT-TTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCC-
T ss_pred ceeeecccccccccccccccc-chhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccch-
Confidence 99999877642211 0011 11223344444433 345689999999999999999999999999999888752
Q ss_pred CCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHH
Q 015550 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (405)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
..... ....... ...+......... +.+.
T Consensus 152 --------~~~~~------~~~~~~~-----------~~~~~~~~~~~~~------~~~~-------------------- 180 (260)
T d2hu7a2 152 --------DWEEM------YELSDAA-----------FRNFIEQLTGGSR------EIMR-------------------- 180 (260)
T ss_dssp --------CHHHH------HHTCCHH-----------HHHHHHHHHCSCH------HHHH--------------------
T ss_pred --------hhhhh------hcccccc-----------ccccccccccccc------cccc--------------------
Confidence 11100 0000000 0001111100000 0000
Q ss_pred hhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Ccccc-ccCHHHHHHHHHHHH
Q 015550 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-HERTEEVNQALIDLI 318 (405)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~-~e~p~~v~~~i~~fl 318 (405)
.......+.++++|+|++||++|.++|++.+.++.+.+ ...+++++++| ||.+. .++..++.+.+.+||
T Consensus 181 ------~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl 254 (260)
T d2hu7a2 181 ------SRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFL 254 (260)
T ss_dssp ------HTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHH
T ss_pred ------ccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHH
Confidence 01122345678899999999999999999999998876 45678999999 99764 366778888889999
Q ss_pred HhhcC
Q 015550 319 KASEK 323 (405)
Q Consensus 319 ~~~~~ 323 (405)
.++.+
T Consensus 255 ~~hl~ 259 (260)
T d2hu7a2 255 ATQRE 259 (260)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88753
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.80 E-value=2e-19 Score=159.72 Aligned_cols=212 Identities=16% Similarity=0.125 Sum_probs=138.4
Q ss_pred EEccCCCCeEEEEecC--CCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCC
Q 015550 30 RTYGRGPTKVILITGL--AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE 107 (405)
Q Consensus 30 ~~~G~~~p~vvllHG~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~ 107 (405)
...|+++|+|+|+||+ +++...|..++..|.. .+.|+++|+||+|.+... .
T Consensus 36 l~~g~~~~~l~c~~~~~~gg~~~~y~~La~~L~~-----------------------~~~V~al~~pG~~~~e~~----~ 88 (255)
T d1mo2a_ 36 MADGPGEVTVICCAGTAAISGPHEFTRLAGALRG-----------------------IAPVRAVPQPGYEEGEPL----P 88 (255)
T ss_dssp EECCSCSSEEEEECCCSSSCSGGGGHHHHHHHTT-----------------------TCCEEEECCTTSSTTCCE----E
T ss_pred ccCCCCCCeEEEECCCCCCCCHHHHHHHHHhcCC-----------------------CceEEEEeCCCcCCCCCC----C
Confidence 3456677889999984 5677889999999987 799999999999988643 3
Q ss_pred CCHHHHHHHHHHHHH-HhCCccEEEEEEChhHHHHHHHHHhCC---cccceEEEeccCCCCCCCCccchhHHHHHHHHHh
Q 015550 108 YTTKIMAKDVIALMD-HLGWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (405)
Q Consensus 108 ~~~~~~~~dl~~~l~-~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (405)
.+++++++++.+.+. ..+..+++|+||||||.+|+.+|.+.+ ++|..++++++..+ ............+
T Consensus 89 ~s~~~~a~~~~~~i~~~~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p-------~~~~~~~~~~~~~ 161 (255)
T d1mo2a_ 89 SSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPP-------GHQDAMNAWLEEL 161 (255)
T ss_dssp SSHHHHHHHHHHHHHHTTSSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCS-------SHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCC-------CCccchhhHHHHH
Confidence 489999999887664 556789999999999999999998754 56999999998632 1222222211111
Q ss_pred hccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCc
Q 015550 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (405)
........ ........+.. ...+.+.+ . . -....+.+|
T Consensus 162 ~~~~~~~~-----~~~~~~~~l~a-----------~~~~~~~~---------------~---------~--~~~~~~~~p 199 (255)
T d1mo2a_ 162 TATLFDRE-----TVRMDDTRLTA-----------LGAYDRLT---------------G---------Q--WRPRETGLP 199 (255)
T ss_dssp HTTCC---------CCCCHHHHHH-----------HHHHHHHH---------------H---------H--CCCCCCCCC
T ss_pred HHHhhccc-----cccCCHHHHHH-----------HHHHHHHH---------------h---------c--CCCccccce
Confidence 11110000 00000111000 00110000 0 0 012356799
Q ss_pred EEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCCCccccc-cCHHHHHHHHHHHHH
Q 015550 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSH-ERTEEVNQALIDLIK 319 (405)
Q Consensus 264 vlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~ggH~~~~-e~p~~v~~~i~~fl~ 319 (405)
++++.+++|...... ..+.+......+++.++|+|+.++ ++++++++.|.+||.
T Consensus 200 ~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~G~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 200 TLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp EEEEECCSSSSCCTT--CCCCCCCCSSCEEEECCSCCSSCSSCCHHHHHHHHHHHHT
T ss_pred EEEeecCCCCCcchh--hHHHHhCCCCcEEEEECCCCcccccccHHHHHHHHHHHhC
Confidence 999999888654432 233333345689999999998554 589999999999985
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.79 E-value=1.4e-21 Score=178.55 Aligned_cols=253 Identities=14% Similarity=0.096 Sum_probs=139.2
Q ss_pred cccccCCEEEEEEEccC-CCCeEEEEecCCCCCCchhh-------hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEE
Q 015550 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGP-------QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-~~p~vvllHG~~~~~~~~~~-------~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi 89 (405)
.++..+...+.|....+ .+++|||+||++.+...|.. ++..+.+ +||+|+
T Consensus 39 ~~~~~~~~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~----------------------~Gy~V~ 96 (318)
T d1qlwa_ 39 GTVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLR----------------------KGYSTY 96 (318)
T ss_dssp EEEEESCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHH----------------------TTCCEE
T ss_pred CceeeceEEEEEECCCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHHh----------------------CCCEEE
Confidence 34556666777776554 34569999999999999865 3455555 499999
Q ss_pred EecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCccc-ceEEEeccCCCCCC
Q 015550 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERV-LSLALLNVTGGGFQ 166 (405)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v-~~lvl~~~~~~~~~ 166 (405)
++|+||||+|..+.. .++..++++++.+.++.+.. .++.++|||+||.++..++...+... ..+++.+.......
T Consensus 97 ~~D~~G~G~S~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (318)
T d1qlwa_ 97 VIDQSGRGRSATDIS--AINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLG 174 (318)
T ss_dssp EEECTTSTTSCCCCH--HHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGG
T ss_pred EecCCCCCCCCCccc--cCCHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEecccccccc
Confidence 999999999976543 34555566666666655432 46778899999999888877654332 22233222211111
Q ss_pred CCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhh
Q 015550 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (405)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (405)
.... ........................ ......+ .........+.. . .. ..
T Consensus 175 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------~~~~~~~~~~~~-----~------~~--~~ 226 (318)
T d1qlwa_ 175 SMPT-PNPTVANLSKLAIKLDGTVLLSHS--QSGIYPF------------QTAAMNPKGITA-----I------VS--VE 226 (318)
T ss_dssp GSCS-SCHHHHHHHHHHHHHTSEEEEEEG--GGTTHHH------------HHHHHCCTTEEE-----E------EE--ES
T ss_pred chhh-hhhhHHHHHHHHhhhccccchhhh--cccchhh------------hhhhhhhhHHHH-----H------Hh--hh
Confidence 1000 001111111111000000000000 0000000 000000000000 0 00 00
Q ss_pred cccChhhhhhhhhcCCcEEEEeecCCccCCHH-----HHHHHHH---HhCCCeEEEEcC-----C-CccccccC-HHHHH
Q 015550 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQIC-----YARRLAE---KLYPVARMIDLP-----G-GHLVSHER-TEEVN 311 (405)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~-----~~~~l~~---~l~~~~~l~~~~-----g-gH~~~~e~-p~~v~ 311 (405)
.............+++|+|+++|++|.++|.. ..+.+.+ +..++++++.++ | ||+++.|. +++++
T Consensus 227 ~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va 306 (318)
T d1qlwa_ 227 PGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVA 306 (318)
T ss_dssp CSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHH
T ss_pred cccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHH
Confidence 00011223345667899999999999999853 2333333 235788998865 5 79999986 58999
Q ss_pred HHHHHHHHhhc
Q 015550 312 QALIDLIKASE 322 (405)
Q Consensus 312 ~~i~~fl~~~~ 322 (405)
+.|.+||+++.
T Consensus 307 ~~i~~wL~~~~ 317 (318)
T d1qlwa_ 307 DLILDWIGRNT 317 (318)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcc
Confidence 99999999864
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.78 E-value=6.4e-18 Score=154.77 Aligned_cols=224 Identities=13% Similarity=0.049 Sum_probs=132.9
Q ss_pred ccCCEEEEEEEcc---C-CC-CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 21 NDNGIKIFYRTYG---R-GP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 21 ~~~g~~i~y~~~G---~-~~-p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
+.+|.+|+...+- . ++ |+||++||++.+...|.... .+.+ +||.|+++|+||
T Consensus 62 s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~-~~a~----------------------~G~~v~~~D~rG 118 (322)
T d1vlqa_ 62 GYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWL-FWPS----------------------MGYICFVMDTRG 118 (322)
T ss_dssp CGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGC-HHHH----------------------TTCEEEEECCTT
T ss_pred CCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHH-HHHh----------------------CCCEEEEeeccc
Confidence 4578888855442 2 22 57999999988877765443 4544 399999999999
Q ss_pred CCCCCCCCCCC-----------------------CCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHH
Q 015550 96 MGRSSVPVKKT-----------------------EYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAA 146 (405)
Q Consensus 96 ~G~S~~~~~~~-----------------------~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~ 146 (405)
+|.|..+.... .......+.|+...++.+ +..++.++|+|+||.+++.++.
T Consensus 119 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~ 198 (322)
T d1vlqa_ 119 QGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSA 198 (322)
T ss_dssp CCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred cCCCCCCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHh
Confidence 99986543211 111223345555555544 2247999999999999998888
Q ss_pred hCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhh
Q 015550 147 MVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGI 226 (405)
Q Consensus 147 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (405)
..| ++++++...+.... ... ........ .......................
T Consensus 199 ~~~-~~~a~v~~~~~~~~--------~~~---~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~--- 249 (322)
T d1vlqa_ 199 LSK-KAKALLCDVPFLCH--------FRR---AVQLVDTH--------------PYAEITNFLKTHRDKEEIVFRTL--- 249 (322)
T ss_dssp HCS-SCCEEEEESCCSCC--------HHH---HHHHCCCT--------------THHHHHHHHHHCTTCHHHHHHHH---
T ss_pred cCC-CccEEEEeCCcccc--------HHH---HHhhcccc--------------chhhHHhhhhcCcchhhhHHHHh---
Confidence 775 68888877654210 000 00000000 00000000000000000000000
Q ss_pred hhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc
Q 015550 227 SATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (405)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e 305 (405)
...+....+.++++|+|+++|++|.++|++.+.++.+++...++++++++ ||....+
T Consensus 250 ----------------------~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~~~ 307 (322)
T d1vlqa_ 250 ----------------------SYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGS 307 (322)
T ss_dssp ----------------------HTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHH
T ss_pred ----------------------hhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCccc
Confidence 01123344567889999999999999999999999998866789999998 9954332
Q ss_pred CHHHHHHHHHHHHHhh
Q 015550 306 RTEEVNQALIDLIKAS 321 (405)
Q Consensus 306 ~p~~v~~~i~~fl~~~ 321 (405)
.-.+...+||++.
T Consensus 308 ---~~~~~~~~~l~~~ 320 (322)
T d1vlqa_ 308 ---FQAVEQVKFLKKL 320 (322)
T ss_dssp ---HHHHHHHHHHHHH
T ss_pred ---cCHHHHHHHHHHH
Confidence 1122334566553
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.76 E-value=1.6e-17 Score=141.87 Aligned_cols=173 Identities=15% Similarity=0.080 Sum_probs=122.5
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC----CCCCCC
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV----KKTEYT 109 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~----~~~~~~ 109 (405)
+..|+||++||++++...|..+.+.+.+ ++.|++++.+..+...... .....+
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~-----------------------~~~vv~p~~~~~~~~~~~~~~~~~~~~~~ 68 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDS-----------------------EASVLSVRGNVLENGMPRFFRRLAEGIFD 68 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHT-----------------------TSCEEEECCSEEETTEEESSCEEETTEEC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhcc-----------------------CCceeeecccccCCCCccccccCCCCCCc
Confidence 3568899999999999999999999887 8999998765433321110 001223
Q ss_pred HHHHH---HHHH----HHHHHhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHH
Q 015550 110 TKIMA---KDVI----ALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (405)
Q Consensus 110 ~~~~~---~dl~----~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (405)
.++.. +++. .+.+..+ ..++.++|+|+||.+++.++.++|+++.+++++++..+...
T Consensus 69 ~~~~~~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~-------------- 134 (202)
T d2h1ia1 69 EEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------- 134 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc--------------
Confidence 33322 2233 3333444 45899999999999999999999999999999987521000
Q ss_pred HHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhc
Q 015550 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA 260 (405)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 260 (405)
.......
T Consensus 135 -------------------------------------------------------------------------~~~~~~~ 141 (202)
T d2h1ia1 135 -------------------------------------------------------------------------MQLANLA 141 (202)
T ss_dssp -------------------------------------------------------------------------CCCCCCT
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0001123
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHhC---CCeEEEEcCCCccccccCHHHHHHHHHHHHHh
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~ 320 (405)
..|++++||++|.++|++.++++.+.+. .+.+++.++|||.+. .+..+.+.+||++
T Consensus 142 ~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ggH~~~----~~~~~~~~~wl~k 200 (202)
T d2h1ia1 142 GKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENRGHQLT----MGEVEKAKEWYDK 200 (202)
T ss_dssp TCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCC----HHHHHHHHHHHHH
T ss_pred cchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCcCC----HHHHHHHHHHHHH
Confidence 4789999999999999999999998772 357888899999653 3456677888876
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.75 E-value=1e-17 Score=144.02 Aligned_cols=181 Identities=19% Similarity=0.171 Sum_probs=120.5
Q ss_pred CEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC----C
Q 015550 24 GIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG----M 96 (405)
Q Consensus 24 g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G----~ 96 (405)
+..+.|+..+. +.|+||++||++++...|..+.+.|.+ ++.+++++.+. .
T Consensus 8 ~~~~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~-----------------------~~~~l~~~~~~~~~~~ 64 (209)
T d3b5ea1 8 DLAFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIAP-----------------------TATLVAARGRIPQEDG 64 (209)
T ss_dssp SSSSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-----------------------TSEEEEECCSEEETTE
T ss_pred CCcceeEecCCCCCCCCEEEEEcCCCCCHHHHHHHHHHhcc-----------------------CcEEEeeccCcCcccC
Confidence 44445666554 468899999999999999999999987 88888886542 1
Q ss_pred CCCCCCCCCCCCCHHHH---HHH----HHHHHHHhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCC
Q 015550 97 GRSSVPVKKTEYTTKIM---AKD----VIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (405)
Q Consensus 97 G~S~~~~~~~~~~~~~~---~~d----l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (405)
............+.+.. +++ +..+.++.+ .++++++||||||.+++.++.++|+++.++|++++......
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~- 143 (209)
T d3b5ea1 65 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH- 143 (209)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-
T ss_pred ccccccCCccccchhhHHHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc-
Confidence 11110111112222222 223 333444443 46899999999999999999999999999999987521000
Q ss_pred CccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhc
Q 015550 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (405)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (405)
T Consensus 144 -------------------------------------------------------------------------------- 143 (209)
T d3b5ea1 144 -------------------------------------------------------------------------------- 143 (209)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCCCccccccCHHHHHHHHHHHHH
Q 015550 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319 (405)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~ 319 (405)
.......++|+++++|++|.++++ .++++.+.+ ..+.++++++|||.+. +++ .+.+.+||.
T Consensus 144 ------~~~~~~~~~p~~~~~G~~D~~~~~-~~~~~~~~l~~~G~~v~~~~~~ggH~i~---~~~-~~~~~~wl~ 207 (209)
T d3b5ea1 144 ------VPATDLAGIRTLIIAGAADETYGP-FVPALVTLLSRHGAEVDARIIPSGHDIG---DPD-AAIVRQWLA 207 (209)
T ss_dssp ------CCCCCCTTCEEEEEEETTCTTTGG-GHHHHHHHHHHTTCEEEEEEESCCSCCC---HHH-HHHHHHHHH
T ss_pred ------ccccccccchheeeeccCCCccCH-HHHHHHHHHHHCCCCeEEEEECCCCCCC---HHH-HHHHHHHhC
Confidence 000122347999999999999874 444555544 4567899999999774 334 456788885
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.75 E-value=1.8e-17 Score=141.55 Aligned_cols=181 Identities=16% Similarity=0.122 Sum_probs=128.6
Q ss_pred EEEEEccC-CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCC--
Q 015550 27 IFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV-- 103 (405)
Q Consensus 27 i~y~~~G~-~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~-- 103 (405)
++....|. +.|+||++||++++...|..+.+.|.+ ++.|+.++.+..+......
T Consensus 7 ~~~~~~~~~~~P~vi~lHG~G~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~~~~~~~~~~~~ 63 (203)
T d2r8ba1 7 FHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLP-----------------------QATILSPVGDVSEHGAARFFR 63 (203)
T ss_dssp CEEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHST-----------------------TSEEEEECCSEEETTEEESSC
T ss_pred EeecCCCCCCCCEEEEECCCCCCHHHHHHHHHHhcc-----------------------CCeEEEecccccccccccccc
Confidence 45444554 678999999999999999999998887 8889998877554432111
Q ss_pred --CCCCCCH---HHHHHHHHHHHH----HhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhH
Q 015550 104 --KKTEYTT---KIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (405)
Q Consensus 104 --~~~~~~~---~~~~~dl~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (405)
.....+. ...++++..+++ ..+.++++++|||+||.+++.++..+|+.+.+++++++..+....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~------- 136 (203)
T d2r8ba1 64 RTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK------- 136 (203)
T ss_dssp BCGGGCBCHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC-------
T ss_pred ccCccccchhHHHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc-------
Confidence 1112223 233344444443 356789999999999999999999999999999999975210000
Q ss_pred HHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhh
Q 015550 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (405)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (405)
T Consensus 137 -------------------------------------------------------------------------------- 136 (203)
T d2r8ba1 137 -------------------------------------------------------------------------------- 136 (203)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 255 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
........|++++||++|.++|++.++++.+.+ .-+++++++++||.+. ++ ..+.+.+||.+.
T Consensus 137 ~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~ggH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 137 ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCC---HH-HHHHHHHHHGGG
T ss_pred cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCcCC---HH-HHHHHHHHHHhc
Confidence 000122469999999999999999999998877 3457889999999864 33 345678888764
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.75 E-value=2.4e-17 Score=146.55 Aligned_cols=178 Identities=19% Similarity=0.204 Sum_probs=131.6
Q ss_pred CEEEEEEEc-cCCC-CeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCC
Q 015550 24 GIKIFYRTY-GRGP-TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (405)
Q Consensus 24 g~~i~y~~~-G~~~-p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~ 101 (405)
+..|+|-.. ++++ |.||++||++++...+..+++.|+. +||.|+++|++|++...
T Consensus 38 ~~~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~----------------------~Gy~V~~~d~~~~~~~~- 94 (260)
T d1jfra_ 38 GGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLAS----------------------QGFVVFTIDTNTTLDQP- 94 (260)
T ss_dssp CEEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHT----------------------TTCEEEEECCSSTTCCH-
T ss_pred CEEEEEcCCCCCCCccEEEEECCCCCCHHHHHHHHHHHHh----------------------CCCEEEEEeeCCCcCCc-
Confidence 356777543 3344 6899999999999999999999998 59999999999876542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh----------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 102 PVKKTEYTTKIMAKDVIALMDHL----------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~l----------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
.....|+.+.++.+ +.++|.++|||+||.+++.++...+ ++.++|.+.+....
T Consensus 95 ---------~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~------- 157 (260)
T d1jfra_ 95 ---------DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTD------- 157 (260)
T ss_dssp ---------HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSC-------
T ss_pred ---------hhhHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccc-------
Confidence 23334444444332 3358999999999999999998876 78888887764200
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
T Consensus 158 -------------------------------------------------------------------------------- 157 (260)
T d1jfra_ 158 -------------------------------------------------------------------------------- 157 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHH-HHHHHHHhC--CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcCC
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICY-ARRLAEKLY--PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~-~~~l~~~l~--~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~~ 324 (405)
..+.++++|+|+++|++|.++|++. .+.+.+.+. ...++++++| +|........++.+.+..||+.....
T Consensus 158 ---~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~~ 231 (260)
T d1jfra_ 158 ---KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDS 231 (260)
T ss_dssp ---CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSC
T ss_pred ---ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhcC
Confidence 0113456899999999999999865 455555442 3467888998 99887776778888899999887543
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.5e-17 Score=142.66 Aligned_cols=180 Identities=16% Similarity=0.173 Sum_probs=121.6
Q ss_pred CCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC---------CC-----
Q 015550 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG---------RS----- 99 (405)
Q Consensus 34 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G---------~S----- 99 (405)
+..++||++||+|++...|..++..+.. .++.+++++-|.+. .+
T Consensus 19 ~~~~~VI~lHG~G~~~~~~~~~~~~l~~----------------------~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~ 76 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGHGWAEAFAGIRS----------------------SHIKYICPHAPVRPVTLNMNVAMPSWFDII 76 (229)
T ss_dssp CCSEEEEEECCSSSCHHHHHHHHHTTCC----------------------TTEEEEECCCCEEEEGGGTTEEEECSSCBC
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHhcC----------------------CCCEEEeCCCCCCccccCCCcccccccccc
Confidence 3445799999999999999888887765 48999998865321 11
Q ss_pred CCCCCCCCCC---HHHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccc
Q 015550 100 SVPVKKTEYT---TKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (405)
Q Consensus 100 ~~~~~~~~~~---~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (405)
..... ...+ +++.++.+..+++.. ..++++++|+||||.+|+.++.++|+++.++|.+++..+.....+
T Consensus 77 ~~~~~-~~~~~~~i~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~~-- 153 (229)
T d1fj2a_ 77 GLSPD-SQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP-- 153 (229)
T ss_dssp CCSTT-CCBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC--
T ss_pred ccccc-chhhhHHHHHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccccc--
Confidence 00000 1111 334444555555432 346899999999999999999999999999999986420000000
Q ss_pred hhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccCh
Q 015550 172 DLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQ 251 (405)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
T Consensus 154 -------------------------------------------------------------------------------- 153 (229)
T d1fj2a_ 154 -------------------------------------------------------------------------------- 153 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh-----CCCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhc
Q 015550 252 KDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-----YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (405)
Q Consensus 252 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l-----~~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~ 322 (405)
+........++|++++||++|.++|.+.+++..+.+ ..+.++++++| ||.+.. +..+.+.+||++..
T Consensus 154 ~~~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~----~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 154 QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ----QEMMDVKQFIDKLL 226 (229)
T ss_dssp SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH----HHHHHHHHHHHHHS
T ss_pred ccccccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccCH----HHHHHHHHHHHhHC
Confidence 000000123479999999999999999888777765 23578889998 996632 33466888998764
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.73 E-value=1.8e-16 Score=140.49 Aligned_cols=222 Identities=12% Similarity=0.067 Sum_probs=134.7
Q ss_pred ccccCCEEEEEEEccC-----CC--CeEEEEecCCCC-----CCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCe
Q 015550 19 ALNDNGIKIFYRTYGR-----GP--TKVILITGLAGT-----HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (405)
Q Consensus 19 ~~~~~g~~i~y~~~G~-----~~--p~vvllHG~~~~-----~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~ 86 (405)
++..||.+++|...=+ ++ |.||++||.++. ...+......++. +||
T Consensus 8 ~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~----------------------~g~ 65 (258)
T d2bgra2 8 FIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST----------------------ENI 65 (258)
T ss_dssp EEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TCC
T ss_pred EEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhc----------------------CCc
Confidence 4677999999987632 22 689999995222 1222233344555 499
Q ss_pred EEEEecCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHhC------CccEEEEEEChhHHHHHHHHHhCCcccceEEE
Q 015550 87 EVCAFDNRGMGRSSVP---VKKTEYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLAL 157 (405)
Q Consensus 87 ~Vi~~D~~G~G~S~~~---~~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 157 (405)
.|+.+|+||.+.+... .....+... ..+++.++++.+. .+++.++|+|+||.+++.++..+|+.+...+.
T Consensus 66 ~V~~~d~rg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~ 144 (258)
T d2bgra2 66 IVASFDGRGSGYQGDKIMHAINRRLGTF-EVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIA 144 (258)
T ss_dssp EEEEECCTTCSSSCHHHHGGGTTCTTSH-HHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEE
T ss_pred EEEeecccccCCcchHHHHhhhhhhhhH-HHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEE
Confidence 9999999998754311 000112222 2334444555442 24699999999999999999999998888777
Q ss_pred eccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccc
Q 015550 158 LNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (405)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (405)
..+...... ... .. ...... ......... . ...
T Consensus 145 ~~~~~~~~~----~~~-~~--~~~~~~------------------------~~~~~~~~~---~-~~~------------ 177 (258)
T d2bgra2 145 VAPVSRWEY----YDS-VY--TERYMG------------------------LPTPEDNLD---H-YRN------------ 177 (258)
T ss_dssp ESCCCCGGG----SBH-HH--HHHHHC------------------------CCSTTTTHH---H-HHH------------
T ss_pred eeccccccc----ccc-cc--cchhcc------------------------cccchhhHH---H-hhc------------
Confidence 765421100 000 00 000000 000000000 0 000
Q ss_pred hhhhHHhhhcccChhhhhhhhhc-CCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-cCHHHHH
Q 015550 238 DGQIHACWMHKMTQKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ERTEEVN 311 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-e~p~~v~ 311 (405)
......+.++ ++|++++||++|..+|+..++++++.+ ..+++++++++ +|.+.. +..+++.
T Consensus 178 -------------~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~ 244 (258)
T d2bgra2 178 -------------STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIY 244 (258)
T ss_dssp -------------SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHH
T ss_pred -------------ccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHH
Confidence 0001112222 379999999999999999999988766 45689999999 997543 4677889
Q ss_pred HHHHHHHHhhcC
Q 015550 312 QALIDLIKASEK 323 (405)
Q Consensus 312 ~~i~~fl~~~~~ 323 (405)
+.+.+||+++-.
T Consensus 245 ~~i~~fl~~~l~ 256 (258)
T d2bgra2 245 THMSHFIKQCFS 256 (258)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 999999998753
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.72 E-value=7.3e-16 Score=133.03 Aligned_cols=174 Identities=20% Similarity=0.220 Sum_probs=126.8
Q ss_pred CCCeEEEEecC---CCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCC
Q 015550 35 GPTKVILITGL---AGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (405)
Q Consensus 35 ~~p~vvllHG~---~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~ 109 (405)
..+++|++||. +++... ...+++.|.+ .||.|+.||+||.|.|..... ..
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~----------------------~G~~~lrfn~RG~g~S~G~~~---~~ 77 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQK----------------------RGFTTLRFNFRSIGRSQGEFD---HG 77 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHH----------------------TTCEEEEECCTTSTTCCSCCC---SS
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHHh----------------------cCeeEEEEecCccCCCccccc---cc
Confidence 34689999984 454433 4456677776 599999999999999976553 22
Q ss_pred HHHHHHHHHHHHHHh---C--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhh
Q 015550 110 TKIMAKDVIALMDHL---G--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l---~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (405)
....+|..++++.+ . ..+++++|+|+||.++..++.+.+ .+.+++++.+.....
T Consensus 78 -~~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~------------------- 136 (218)
T d2i3da1 78 -AGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTY------------------- 136 (218)
T ss_dssp -HHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTS-------------------
T ss_pred -hhHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeecccccccc-------------------
Confidence 22334444444433 2 357999999999999999998875 577788877652100
Q ss_pred ccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcE
Q 015550 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLV 264 (405)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 264 (405)
....+....+|+
T Consensus 137 --------------------------------------------------------------------~~~~~~~~~~p~ 148 (218)
T d2i3da1 137 --------------------------------------------------------------------DFSFLAPCPSSG 148 (218)
T ss_dssp --------------------------------------------------------------------CCTTCTTCCSCE
T ss_pred --------------------------------------------------------------------chhhccccCCCc
Confidence 001123445899
Q ss_pred EEEeecCCccCCHHHHHHHHHHhC----CCeEEEEcCC-CccccccCHHHHHHHHHHHHHhhcC
Q 015550 265 SVIHGRHDVIAQICYARRLAEKLY----PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (405)
Q Consensus 265 lvi~G~~D~~~~~~~~~~l~~~l~----~~~~l~~~~g-gH~~~~e~p~~v~~~i~~fl~~~~~ 323 (405)
++++|+.|.+++......+.+.+. ...++++++| +|++. .+.+++.+.+.+||++...
T Consensus 149 l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~~l~ 211 (218)
T d2i3da1 149 LIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLN 211 (218)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHT
T ss_pred eeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHHhcC
Confidence 999999999999999988887763 2458899998 99764 6789999999999988764
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.69 E-value=3.4e-17 Score=149.93 Aligned_cols=105 Identities=25% Similarity=0.353 Sum_probs=91.8
Q ss_pred ccCCCCeEEEEecCCCCCC------chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 32 YGRGPTKVILITGLAGTHD------AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 32 ~G~~~p~vvllHG~~~~~~------~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
+.+.+.||||+||++++.. .|..+.+.|.+ +||+|+++|+||+|.|+.+.
T Consensus 4 y~~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~----------------------~G~~V~~~~~~g~g~s~~~~-- 59 (319)
T d1cvla_ 4 YAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQS----------------------HGAKVYVANLSGFQSDDGPN-- 59 (319)
T ss_dssp TTCCSSCEEEECCTTBSSEETTTEESSTTHHHHHHH----------------------TTCCEEECCCBCSSCTTSTT--
T ss_pred CCCCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHH----------------------CCCEEEEecCCCCCCCCCCc--
Confidence 3445556999999988765 37888888987 49999999999999987544
Q ss_pred CCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+.+++++++.++++.++.++++++||||||.++..++.++|++|+++|+++++.
T Consensus 60 --~~~~~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 60 --GRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp --SHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --ccHHHHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 3678899999999999999999999999999999999999999999999999864
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.67 E-value=2.5e-16 Score=139.77 Aligned_cols=230 Identities=13% Similarity=0.081 Sum_probs=123.0
Q ss_pred EEEEEEcc-CCCCeEEEEecCC-----CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCC
Q 015550 26 KIFYRTYG-RGPTKVILITGLA-----GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS 99 (405)
Q Consensus 26 ~i~y~~~G-~~~p~vvllHG~~-----~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S 99 (405)
.+.|...+ +.+|+||++||.+ .+...|..+.+.+.. .+...||.|+.+|+|..+..
T Consensus 20 ~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~------------------~~~~~g~~v~~~dYrl~p~~ 81 (263)
T d1vkha_ 20 TLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKS------------------MDTESTVCQYSIEYRLSPEI 81 (263)
T ss_dssp CEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHH------------------HCTTCCEEEEEECCCCTTTS
T ss_pred eEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHH------------------HHHhCCeEEEEeccccCcch
Confidence 45565554 4667899999954 223345554444432 11115999999999976543
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHH
Q 015550 100 SVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (405)
Q Consensus 100 ~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
.. ...+++..+.+..+.+..+.++++++|||+||.+++.++...++....+...... ..
T Consensus 82 ~~-----~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~----------------~~ 140 (263)
T d1vkha_ 82 TN-----PRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQ----------------ML 140 (263)
T ss_dssp CT-----THHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHH----------------HH
T ss_pred hh-----hHHHHhhhhhhhcccccccccceeeeccCcHHHHHHHHHHhccCccccccccccc----------------cc
Confidence 22 2345666667777777788889999999999999999998776543222111100 00
Q ss_pred HHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhh
Q 015550 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (405)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (405)
.... .. .........+....+.... ... ..+....-.............. .......+..
T Consensus 141 ~~~~---~~--~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 200 (263)
T d1vkha_ 141 GLLQ---IV--KRVFLLDGIYSLKELLIEY---PEY----DCFTRLAFPDGIQMYEEEPSRV--------MPYVKKALSR 200 (263)
T ss_dssp HHHT---TE--EEEEEESCCCCHHHHHHHC---GGG----HHHHHHHCTTCGGGCCCCHHHH--------HHHHHHHHHH
T ss_pred cccc---cc--cccccccccccchhhhhhc---ccc----chhhhccccccccccccccccc--------Cccccccccc
Confidence 0000 00 0000000000000000000 000 0000000000000000000000 0011233456
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-CccccccCHHHHHHHHH
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALI 315 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~e~p~~v~~~i~ 315 (405)
+.+|++++||++|.++|++.+.++++++ ..+++++++++ +|...+++. ++.+.|.
T Consensus 201 ~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~~-~~~~~i~ 259 (263)
T d1vkha_ 201 FSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNG-KVAKYIF 259 (263)
T ss_dssp HTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGCH-HHHHHHH
T ss_pred cCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchhhhcCh-HHHHHHH
Confidence 7799999999999999999999998876 34688999998 897766664 4555554
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.7e-16 Score=140.79 Aligned_cols=220 Identities=12% Similarity=0.140 Sum_probs=128.9
Q ss_pred cccccCCEEEEEEEccC-----C--CCeEEEEecCCCC---CCchh--hhHhhhcCCCCCCCCchhhhccccCCCCCCCC
Q 015550 18 AALNDNGIKIFYRTYGR-----G--PTKVILITGLAGT---HDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAG 85 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~-----~--~p~vvllHG~~~~---~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g 85 (405)
..++.||.+|....+-+ + -|+||++||.+++ ...|. .....|++ +|
T Consensus 6 ~~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~----------------------~G 63 (258)
T d1xfda2 6 RDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSS----------------------HG 63 (258)
T ss_dssp CCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT----------------------TC
T ss_pred EEEeeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhc----------------------CC
Confidence 44678999998665532 2 2688999996332 23332 23445776 49
Q ss_pred eEEEEecCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCc----cc
Q 015550 86 IEVCAFDNRGMGRSSV---PVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPE----RV 152 (405)
Q Consensus 86 ~~Vi~~D~~G~G~S~~---~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v 152 (405)
|.|+++|+||.+.+.. ......+.. ...+|+.++++.+ +.+++.++|||+||.+++.++...++ .+
T Consensus 64 ~~vv~~d~rGs~~~g~~~~~~~~~~~g~-~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~ 142 (258)
T d1xfda2 64 AVVVKCDGRGSGFQGTKLLHEVRRRLGL-LEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTF 142 (258)
T ss_dssp CEEECCCCTTCSSSHHHHHHTTTTCTTT-HHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCC
T ss_pred cEEEEeccccccccchhHhhhhhccchh-HHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceee
Confidence 9999999998553311 000012211 2244555555554 23579999999999999988776654 35
Q ss_pred ceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhcccc
Q 015550 153 LSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ 232 (405)
Q Consensus 153 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (405)
...+.+++..... ...... ........ ....
T Consensus 143 ~~~~~~~~~~~~~----~~~~~~---~~~~~~~~-----------------------------------------~~~~- 173 (258)
T d1xfda2 143 TCGSALSPITDFK----LYASAF---SERYLGLH-----------------------------------------GLDN- 173 (258)
T ss_dssp SEEEEESCCCCTT----SSBHHH---HHHHHCCC-----------------------------------------SSCC-
T ss_pred eeeeccccceeee----cccccc---cccccccc-----------------------------------------ccch-
Confidence 5555555432100 000000 00000000 0000
Q ss_pred CcccchhhhHHhhhcccChhhhhhhhh-cCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCC-Cccccc-cC
Q 015550 233 SNYGFDGQIHACWMHKMTQKDIQTIRS-AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ER 306 (405)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~g-gH~~~~-e~ 306 (405)
.. +. .......+.. .++|+|++||+.|..+|++.+.++.+.+ ..+.+++++++ +|.+.. +.
T Consensus 174 ~~----------~~---~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~ 240 (258)
T d1xfda2 174 RA----------YE---MTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSL 240 (258)
T ss_dssp SS----------TT---TTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHH
T ss_pred HH----------hh---ccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcC
Confidence 00 00 0001111222 3689999999999999999988888766 45678999999 997654 35
Q ss_pred HHHHHHHHHHHHHhhc
Q 015550 307 TEEVNQALIDLIKASE 322 (405)
Q Consensus 307 p~~v~~~i~~fl~~~~ 322 (405)
...+.+.+.+||++.-
T Consensus 241 ~~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 241 KQHLYRSIINFFVECF 256 (258)
T ss_dssp HHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 5678899999998753
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.66 E-value=2.5e-15 Score=130.99 Aligned_cols=194 Identities=12% Similarity=0.090 Sum_probs=131.2
Q ss_pred cccccCCEEEEEEEccC---CCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC
Q 015550 18 AALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (405)
Q Consensus 18 ~~~~~~g~~i~y~~~G~---~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~ 94 (405)
.+...||..+.....-+ ..|.||++|+..+.......+++.|++ +||.|+++|+.
T Consensus 7 ~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~----------------------~Gy~vl~pd~~ 64 (233)
T d1dina_ 7 SIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVD----------------------QGYAAVCPDLY 64 (233)
T ss_dssp CEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHH----------------------TTCEEEEECGG
T ss_pred EEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHHh----------------------cCCcceeeeec
Confidence 34556787777655533 336899999877766666777888887 49999999998
Q ss_pred CCCCCCCCCCC-------------CCCCHHHHHHHHHHHHHHhC-----CccEEEEEEChhHHHHHHHHHhCCcccceEE
Q 015550 95 GMGRSSVPVKK-------------TEYTTKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLA 156 (405)
Q Consensus 95 G~G~S~~~~~~-------------~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 156 (405)
|.+........ ...+.+....|+...++.+. .++|.++|+|+||.+++.++... .+.+.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~ 142 (233)
T d1dina_ 65 ARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAV 142 (233)
T ss_dssp GGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEE
T ss_pred cCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceec
Confidence 76655332211 12244555667777666652 24799999999999999988763 355555
Q ss_pred EeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCccc
Q 015550 157 LLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYG 236 (405)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (405)
.+.+.+.
T Consensus 143 ~~~~~~~------------------------------------------------------------------------- 149 (233)
T d1dina_ 143 GYYGVGL------------------------------------------------------------------------- 149 (233)
T ss_dssp EESCSCG-------------------------------------------------------------------------
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 4432210
Q ss_pred chhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh--CCCeEEEEcCC-CccccccC-------
Q 015550 237 FDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL--YPVARMIDLPG-GHLVSHER------- 306 (405)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l--~~~~~l~~~~g-gH~~~~e~------- 306 (405)
....+...++++|+|+++|++|..+|.+..+.+.+.+ .++.++++++| +|.+..+.
T Consensus 150 --------------~~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~ 215 (233)
T d1dina_ 150 --------------EKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVAS 215 (233)
T ss_dssp --------------GGGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHH
T ss_pred --------------ccchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHH
Confidence 0011233567799999999999999999888877655 35678999999 99764321
Q ss_pred -HHHHHHHHHHHHHhhc
Q 015550 307 -TEEVNQALIDLIKASE 322 (405)
Q Consensus 307 -p~~v~~~i~~fl~~~~ 322 (405)
.++..+.+.+||...+
T Consensus 216 aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 216 AAALANERTLDFLAPLQ 232 (233)
T ss_dssp HHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHcCc
Confidence 2344567778887654
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.65 E-value=3.3e-16 Score=141.46 Aligned_cols=100 Identities=17% Similarity=0.157 Sum_probs=83.9
Q ss_pred CCeEEEEecCCCCCCc--hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 36 PTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
.++|||+||++++... |..+.+.|.. +||.|+.+|+||+|.++. ..+.+++
T Consensus 31 ~~PVvlvHG~~~~~~~~~~~~~~~~L~~----------------------~Gy~v~~~d~~g~g~~d~-----~~sae~l 83 (317)
T d1tcaa_ 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQ----------------------LGYTPCWISPPPFMLNDT-----QVNTEYM 83 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHT----------------------TTCEEEEECCTTTTCSCH-----HHHHHHH
T ss_pred CCcEEEECCCCCCCcchhHHHHHHHHHh----------------------CCCeEEEecCCCCCCCch-----HhHHHHH
Confidence 3469999999987654 6778899988 599999999999998753 3356667
Q ss_pred HHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCc---ccceEEEeccCC
Q 015550 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTG 162 (405)
Q Consensus 114 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 162 (405)
++.+..+++..+.++++||||||||.++..++..+|+ +|+.+|.+++..
T Consensus 84 a~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 84 VNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 7777777788888999999999999999999999884 699999999874
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.62 E-value=3.1e-16 Score=140.74 Aligned_cols=103 Identities=19% Similarity=0.283 Sum_probs=89.1
Q ss_pred cCCCCeEEEEecCCCCCCc-----hhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCC
Q 015550 33 GRGPTKVILITGLAGTHDA-----WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE 107 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~-----~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~ 107 (405)
.+.+.||||+||++++... |..+.+.|.+ +||+|+++|++|+|.+ .
T Consensus 4 ~~~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~----------------------~G~~v~~~~~~~~~~~-------~ 54 (285)
T d1ex9a_ 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRR----------------------DGAQVYVTEVSQLDTS-------E 54 (285)
T ss_dssp TCCSSCEEEECCTTCCSEETTEESSTTHHHHHHH----------------------TTCCEEEECCCSSSCH-------H
T ss_pred CCCCCCEEEECCCCCCccccchhhHHHHHHHHHh----------------------CCCEEEEeCCCCCCCc-------H
Confidence 3445569999999887643 7888899987 4999999999999865 3
Q ss_pred CCHHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 108 YTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 108 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
.+.+++++++.++++.++.+++++|||||||.++..++..+|++|+++|.++++..+
T Consensus 55 ~~a~~l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~G 111 (285)
T d1ex9a_ 55 VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKG 111 (285)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCccceeEEEECCCCCC
Confidence 467788999999999999999999999999999999999999999999999987543
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.61 E-value=3.2e-14 Score=122.56 Aligned_cols=181 Identities=16% Similarity=0.113 Sum_probs=115.0
Q ss_pred cCCCCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC--------CCCCC----
Q 015550 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG--------MGRSS---- 100 (405)
Q Consensus 33 G~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G--------~G~S~---- 100 (405)
++.+++||++||+|++...|..+.+.|...+ .++.+++++-|. .....
T Consensus 11 ~~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~--------------------~~~~~i~p~ap~~~~~~~~~~~~~~w~~~ 70 (218)
T d1auoa_ 11 KPADACVIWLHGLGADRYDFMPVAEALQESL--------------------LTTRFVLPQAPTRPVTINGGYEMPSWYDI 70 (218)
T ss_dssp SCCSEEEEEECCTTCCTTTTHHHHHHHHTTC--------------------TTEEEEECCCCEEEEGGGTTEEEECSSCE
T ss_pred CCCCeEEEEEcCCCCChhhHHHHHHHHHHhC--------------------CCcEEEccCCCccccccCCCcccCccccc
Confidence 3445689999999999999988888886522 156667665431 10000
Q ss_pred -CCCCCCCCCHH---HHHHHHHHHHH---Hh--CCccEEEEEEChhHHHHHHHHHh-CCcccceEEEeccCCCCCCCCcc
Q 015550 101 -VPVKKTEYTTK---IMAKDVIALMD---HL--GWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 101 -~~~~~~~~~~~---~~~~dl~~~l~---~l--~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~ 170 (405)
........+.+ ...+.+.++++ .. +.++++++|+||||++++.++.. .+..+.++|.+++..+......
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~- 149 (218)
T d1auoa_ 71 KAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDEL- 149 (218)
T ss_dssp EECSSSCEECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTC-
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccc-
Confidence 00000112222 22222333333 22 34689999999999999998765 4667899999886421000000
Q ss_pred chhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccC
Q 015550 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (405)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
T Consensus 150 -------------------------------------------------------------------------------- 149 (218)
T d1auoa_ 150 -------------------------------------------------------------------------------- 149 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHh---CCCeEEEEcCCCccccccCHHHHHHHHHHHHHhh
Q 015550 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (405)
Q Consensus 251 ~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l---~~~~~l~~~~ggH~~~~e~p~~v~~~i~~fl~~~ 321 (405)
.......+.|++++||++|.++|.+.++++.+.+ ..+++++++++||... ++..+.+.+||.+.
T Consensus 150 ---~~~~~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~gH~i~----~~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 150 ---ELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVL----PQEIHDIGAWLAAR 216 (218)
T ss_dssp ---CCCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCC----HHHHHHHHHHHHHH
T ss_pred ---ccchhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCccC----HHHHHHHHHHHHHh
Confidence 0000122479999999999999999999888877 2367899998899664 33456688888764
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.52 E-value=5.5e-14 Score=124.32 Aligned_cols=176 Identities=13% Similarity=0.047 Sum_probs=112.7
Q ss_pred ccCCCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 015550 32 YGRGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (405)
Q Consensus 32 ~G~~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~ 108 (405)
.+...|+||++||.+ ++...|..++..|.+ +||.|+.+|+|..+. .
T Consensus 58 ~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~----------------------~G~~Vv~~~YRl~p~---------~ 106 (261)
T d2pbla1 58 EGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALS----------------------KGWAVAMPSYELCPE---------V 106 (261)
T ss_dssp SSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHH----------------------TTEEEEEECCCCTTT---------S
T ss_pred CCCCCCeEEEECCCCCccCChhHhhhHHHHHhc----------------------CCceeeccccccccc---------c
Confidence 344567899999954 444567778888877 599999999996533 2
Q ss_pred CHHHHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCC------cccceEEEeccCCCCCCCCccchhHHHHHH
Q 015550 109 TTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVP------ERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (405)
Q Consensus 109 ~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
++.+..+|+.+.++.+ ...+++|+|||.||.++..++.... ..+++++++++..... ....
T Consensus 107 ~~p~~~~d~~~a~~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------ 176 (261)
T d2pbla1 107 RISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLR----PLLR------ 176 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCG----GGGG------
T ss_pred cCchhHHHHHHHHHHHHhcccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccc----hhhh------
Confidence 4555666666555544 2378999999999999987765432 3578888887652110 0000
Q ss_pred HHHhhccChhhhhccCcccccCHhHHHhhhCCCchhHHHHHHHHhhhhhccccCcccchhhhHHhhhcccChhhhhhhhh
Q 015550 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (405)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (405)
.+....+.... +.... .........
T Consensus 177 -----------------------~~~~~~~~~~~------~~~~~--------------------------~SP~~~~~~ 201 (261)
T d2pbla1 177 -----------------------TSMNEKFKMDA------DAAIA--------------------------ESPVEMQNR 201 (261)
T ss_dssp -----------------------STTHHHHCCCH------HHHHH--------------------------TCGGGCCCC
T ss_pred -----------------------hhhcccccCCH------HHHHH--------------------------hCchhhccc
Confidence 00001111000 00000 011122345
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHhCCCeEEEEcCC-Ccccccc
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~~~~~l~~~~g-gH~~~~e 305 (405)
..+|+++++|++|..++.+.++++++.+ +++.+++++ +|+-.++
T Consensus 202 ~~~P~li~~G~~D~~~~~~qs~~~~~~l--~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 202 YDAKVTVWVGGAERPAFLDQAIWLVEAW--DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp CSCEEEEEEETTSCHHHHHHHHHHHHHH--TCEEEEETTCCTTTTTG
T ss_pred CCCeEEEEEecCCCchHHHHHHHHHHHh--CCCceEeCCCCchhHHH
Confidence 6689999999999988888999999988 467888898 8865443
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.49 E-value=8.9e-13 Score=121.54 Aligned_cols=120 Identities=15% Similarity=0.171 Sum_probs=88.1
Q ss_pred cCCEEEEEEEccC---CC-CeEEEEecCCCCCC----chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecC
Q 015550 22 DNGIKIFYRTYGR---GP-TKVILITGLAGTHD----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (405)
Q Consensus 22 ~~g~~i~y~~~G~---~~-p~vvllHG~~~~~~----~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~ 93 (405)
-||++|....+-+ ++ |+||+.||++.... .+......|++ +||.|+++|.
T Consensus 13 rDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~----------------------~GY~vv~~d~ 70 (347)
T d1ju3a2 13 RDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVR----------------------DGYAVVIQDT 70 (347)
T ss_dssp TTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHH----------------------TTCEEEEEEC
T ss_pred CCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHH----------------------CCCEEEEEee
Confidence 3899998766543 33 67888899875332 22333445555 5999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCC
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (405)
||+|.|...... ....+.-+.|+++++....+ .+|.++|+|+||.+++.+|...|..++++|...+....
T Consensus 71 RG~g~S~G~~~~-~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 71 RGLFASEGEFVP-HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp TTSTTCCSCCCT-TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred CCccccCCcccc-ccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 999999876542 33344445667777776654 48999999999999999999999889999988877543
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.32 E-value=1.4e-11 Score=115.87 Aligned_cols=215 Identities=12% Similarity=0.013 Sum_probs=118.5
Q ss_pred CCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--------------------ccEEEEEEChhHHH
Q 015550 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW--------------------KQAHVFGHSMGAMI 140 (405)
Q Consensus 81 l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l~~--------------------~~v~lvGhS~Gg~i 140 (405)
++++||.|+.+|.||.|.|.+... .++.+ .++|..++++-+.. .+|.++|+|+||+.
T Consensus 132 ~~~~GYavv~~D~RG~g~S~G~~~--~~~~~-e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~ 208 (405)
T d1lnsa3 132 FLTRGFASIYVAGVGTRSSDGFQT--SGDYQ-QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTM 208 (405)
T ss_dssp HHTTTCEEEEECCTTSTTSCSCCC--TTSHH-HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHH
T ss_pred HHhCCCEEEEECCCCCCCCCCccc--cCChh-hhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHH
Confidence 445799999999999999987653 44544 46677777776632 27999999999999
Q ss_pred HHHHHHhCCcccceEEEeccCCCCCCCCccchhHHHHHHHHHhhccChhhhhccCcccccCHhHHHhhhCCCch----hH
Q 015550 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR----RA 216 (405)
Q Consensus 141 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 216 (405)
++.+|...|..++++|..++....+. .+.......... ................... ..
T Consensus 209 q~~aA~~~pp~LkAivp~~~~~d~y~--------------~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (405)
T d1lnsa3 209 AYGAATTGVEGLELILAEAGISSWYN--------------YYRENGLVRSPG---GFPGEDLDVLAALTYSRNLDGADFL 271 (405)
T ss_dssp HHHHHTTTCTTEEEEEEESCCSBHHH--------------HHBSSSSBCCCT---TCTTCCHHHHHHHHCGGGGSHHHHH
T ss_pred HHHHHhcCCccceEEEecCccccHHH--------------HhhcCCcccccc---chhhhhhhhhhccccccccccchhh
Confidence 99999999989999998887631100 000000000000 0000000000000000000 00
Q ss_pred HHHHHHH---hhhhhccccCcccchhhhHHhhhcccChhhhhhhhhcCCcEEEEeecCCccCCHHHHHHHHHHhC--CCe
Q 015550 217 ILYQEYV---KGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY--PVA 291 (405)
Q Consensus 217 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~--~~~ 291 (405)
.....+. .............+ ...|.. .+....+.++++|+|+|+|-.|..+++..+.++.+.+. ...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~----d~~w~~---~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~ 344 (405)
T d1lnsa3 272 KGNAEYEKRLAEMTAALDRKSGDY----NQFWHD---RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAK 344 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTCCC----CHHHHT---TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCE
T ss_pred hchhhhhhccchhhhhhhhccccc----hhhhhh---cChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCc
Confidence 0000000 00000000000011 111221 23345567899999999999999999888888888763 236
Q ss_pred EEEEcCCCcccccc-CHHHHHHHHHHHHHhhc
Q 015550 292 RMIDLPGGHLVSHE-RTEEVNQALIDLIKASE 322 (405)
Q Consensus 292 ~l~~~~ggH~~~~e-~p~~v~~~i~~fl~~~~ 322 (405)
++++-+++|..... ...++.+.+.+|++...
T Consensus 345 ~Lilgpw~H~~~~~~~~~d~~~~~~~wFD~~L 376 (405)
T d1lnsa3 345 HAFLHRGAHIYMNSWQSIDFSETINAYFVAKL 376 (405)
T ss_dssp EEEEESCSSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCcccccchHHHHHHHHHHHHh
Confidence 77776789975432 22234444555555544
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.27 E-value=1.2e-10 Score=102.14 Aligned_cols=51 Identities=12% Similarity=0.195 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 111 KIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 111 ~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
..+++++...++.. ..+++.++|+|+||..++.+|.++|+++.+++.+++.
T Consensus 114 ~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~ 169 (255)
T d1jjfa_ 114 KDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 169 (255)
T ss_dssp HHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccC
Confidence 34555555555543 2357999999999999999999999999999999876
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.27 E-value=7.7e-11 Score=108.81 Aligned_cols=115 Identities=20% Similarity=0.119 Sum_probs=73.4
Q ss_pred ccCCEEEEEEEc---cC-C-CCeEEEEecCCC---CCC--chhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEE
Q 015550 21 NDNGIKIFYRTY---GR-G-PTKVILITGLAG---THD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (405)
Q Consensus 21 ~~~g~~i~y~~~---G~-~-~p~vvllHG~~~---~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~ 90 (405)
..+|..|..+.+ +. + .|+||++||.|- +.. .+..++..+.. +|+.|+.
T Consensus 86 ~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~----------------------~g~~Vvs 143 (358)
T d1jkma_ 86 GVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAA----------------------AGSVVVM 143 (358)
T ss_dssp CTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHH----------------------TTCEEEE
T ss_pred CCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHh----------------------hhheeee
Confidence 457766664443 32 2 257999999754 222 34567777776 4999999
Q ss_pred ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-------HhCCccEEEEEEChhHHHHHHHHHh-----CCcccceEEEe
Q 015550 91 FDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD-------HLGWKQAHVFGHSMGAMIACKLAAM-----VPERVLSLALL 158 (405)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~-------~l~~~~v~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~ 158 (405)
+|+|..+..... +.+....+|+.+.++ .++.++++|+|+|.||.+|+.++.. .+..+.++++.
T Consensus 144 vdYRla~~~~pe-----~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~ 218 (358)
T d1jkma_ 144 VDFRNAWTAEGH-----HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYAS 218 (358)
T ss_dssp EECCCSEETTEE-----CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEE
T ss_pred eeeccccccccc-----CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccc
Confidence 999986433211 111223333333322 3567899999999999999877654 23467888888
Q ss_pred ccCC
Q 015550 159 NVTG 162 (405)
Q Consensus 159 ~~~~ 162 (405)
.+..
T Consensus 219 ~p~~ 222 (358)
T d1jkma_ 219 IPYI 222 (358)
T ss_dssp SCCC
T ss_pred ccee
Confidence 7764
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.24 E-value=5.2e-11 Score=110.88 Aligned_cols=123 Identities=15% Similarity=0.012 Sum_probs=81.0
Q ss_pred cccCCEEEEEEEc---cCCC-CeEEEEecCCCCCC-------c----hhhhHhhhcCCCCCCCCchhhhccccCCCCCCC
Q 015550 20 LNDNGIKIFYRTY---GRGP-TKVILITGLAGTHD-------A----WGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (405)
Q Consensus 20 ~~~~g~~i~y~~~---G~~~-p~vvllHG~~~~~~-------~----~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (405)
..-||++|....+ +.++ |+||+.|+++.... . +....+.|++ +
T Consensus 30 ~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~----------------------~ 87 (381)
T d1mpxa2 30 PMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVE----------------------G 87 (381)
T ss_dssp ECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHH----------------------T
T ss_pred ECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHh----------------------C
Confidence 3447999985544 4343 67888888753211 1 1123344555 5
Q ss_pred CeEEEEecCCCCCCCCCCCCCCC-------CCHHHHHHHHHHHHHHh----CC--ccEEEEEEChhHHHHHHHHHhCCcc
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTE-------YTTKIMAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVPER 151 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~-------~~~~~~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~ 151 (405)
||.|+.+|.||+|.|........ ....+.++|..+.++.+ .+ .+|.++|+|+||.+++.+|...|..
T Consensus 88 Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~ 167 (381)
T d1mpxa2 88 GYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPA 167 (381)
T ss_dssp TCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTT
T ss_pred CCEEEEEecCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccc
Confidence 99999999999999976432110 00112234444444332 23 4899999999999999999999999
Q ss_pred cceEEEeccCCCC
Q 015550 152 VLSLALLNVTGGG 164 (405)
Q Consensus 152 v~~lvl~~~~~~~ 164 (405)
++++|...+....
T Consensus 168 l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 168 LKVAVPESPMIDG 180 (381)
T ss_dssp EEEEEEESCCCCT
T ss_pred cceeeeecccccc
Confidence 9999998877543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.24 E-value=6.7e-11 Score=107.03 Aligned_cols=114 Identities=15% Similarity=0.111 Sum_probs=69.9
Q ss_pred CCEEEEEEEccC--CCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 23 NGIKIFYRTYGR--GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 23 ~g~~i~y~~~G~--~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.+..|..+.+-+ ..|.||++||.+ ++...+..++..+... .|+.|+.+|+|..-
T Consensus 64 ~~g~i~~~iy~P~~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~---------------------~g~~Vv~v~Yrlap 122 (311)
T d1jjia_ 64 RNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIESHDALCRRIARL---------------------SNSTVVSVDYRLAP 122 (311)
T ss_dssp TTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHH---------------------HTSEEEEEECCCTT
T ss_pred CCCcEEEEEEcCCCCceEEEEEcCCCCccCChhhhhhhhhhhhhc---------------------CCcEEEEecccccc
Confidence 333555555444 346899999975 4455666777666541 39999999999643
Q ss_pred CCCCCCCCCCCCHHHHHHH---HHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhC----CcccceEEEeccCC
Q 015550 98 RSSVPVKKTEYTTKIMAKD---VIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTG 162 (405)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~d---l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~ 162 (405)
.... ...+++..+. +.+..+.++. +++.++|+|.||.+++.++... .....+.+++.+..
T Consensus 123 ~~~~-----p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~ 191 (311)
T d1jjia_ 123 EHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVV 191 (311)
T ss_dssp TSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCC
T ss_pred cccc-----chhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeeccee
Confidence 3221 1122222222 2222233343 5899999999999988776543 23467778887763
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.23 E-value=2.2e-10 Score=103.82 Aligned_cols=90 Identities=20% Similarity=0.182 Sum_probs=56.8
Q ss_pred CeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHH
Q 015550 37 TKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (405)
Q Consensus 37 p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (405)
|.||++||.+ ++...+..++..++.. .||.|+.+|+|.......+.. ..+..+.
T Consensus 79 Pvvv~iHGGG~~~g~~~~~~~~~~~la~~---------------------~G~~V~~vdYrl~pe~~~~~~--~~d~~~~ 135 (317)
T d1lzla_ 79 PVLLWIHGGGFAIGTAESSDPFCVEVARE---------------------LGFAVANVEYRLAPETTFPGP--VNDCYAA 135 (317)
T ss_dssp EEEEEECCSTTTSCCGGGGHHHHHHHHHH---------------------HCCEEEEECCCCTTTSCTTHH--HHHHHHH
T ss_pred cEEEEecCcccccccccccchHHHhHHhh---------------------cCCcccccccccccccccccc--ccccccc
Confidence 5799999965 4455666777666541 399999999997654432211 0111112
Q ss_pred HHHHHHHHHHhCC--ccEEEEEEChhHHHHHHHHHhCC
Q 015550 114 AKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 114 ~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
.+.+.+..+.+++ ++|+++|+|.||.+++.++...+
T Consensus 136 ~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~ 173 (317)
T d1lzla_ 136 LLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKAR 173 (317)
T ss_dssp HHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhh
Confidence 2222222334444 57999999999999998887643
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.16 E-value=2.9e-09 Score=93.77 Aligned_cols=116 Identities=19% Similarity=0.198 Sum_probs=81.0
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCCC--Cchhhh---HhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGTH--DAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~~--~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
.|..|.....+.+.|+|+|+||.+++. ..|... .+.... .++.|+.+|--..+
T Consensus 14 ~~r~~~~~v~~~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~----------------------~~~iVV~p~g~~~~ 71 (267)
T d1r88a_ 14 MGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAG----------------------KGISVVAPAGGAYS 71 (267)
T ss_dssp TTEEEEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTT----------------------SSSEEEEECCCTTS
T ss_pred CCceeeEEEECCCCCEEEEcCCCCCCCCcchhhhccHHHHHHhh----------------------CCeEEEEECCCCCc
Confidence 567788777777788999999986643 356543 333333 48999999842211
Q ss_pred C-CCCCCCCCCCCHH-HHHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 98 R-SSVPVKKTEYTTK-IMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 98 ~-S~~~~~~~~~~~~-~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
. +..+.. ....++ -+.+++...++.. ..+++.+.|+||||..|+.+|.++|+++.+++.+++.
T Consensus 72 ~y~~~~~~-~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~ 139 (267)
T d1r88a_ 72 MYTNWEQD-GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 139 (267)
T ss_dssp TTSBCSSC-TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred CCcccccc-ccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCc
Confidence 1 111111 123344 3556787777643 3457999999999999999999999999999999976
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.13 E-value=4.1e-10 Score=101.46 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=69.7
Q ss_pred cccCCEEEEEEEccC-----CCCeEEEEecCC---CCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEe
Q 015550 20 LNDNGIKIFYRTYGR-----GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (405)
Q Consensus 20 ~~~~g~~i~y~~~G~-----~~p~vvllHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~ 91 (405)
+..+|..|..+.+-+ ..|.||++||.+ ++...+..++..+... .++.|+.+
T Consensus 51 ~~~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~---------------------~~~~v~~v 109 (308)
T d1u4na_ 51 MDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKD---------------------GRAVVFSV 109 (308)
T ss_dssp EEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH---------------------HTSEEEEE
T ss_pred EecCCceEEEEEEeccccCCCCCEEEEEecCeeeeeccccccchhhhhhhc---------------------cccccccc
Confidence 345676665544322 225799999975 4556677777777652 25778999
Q ss_pred cCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------C--CccEEEEEEChhHHHHHHHHHhCCc----ccceEEEe
Q 015550 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-------G--WKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALL 158 (405)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-------~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~ 158 (405)
|+|...... .....+|+...++.+ + .+++++.|+|.||.+++.++....+ .+.+..++
T Consensus 110 ~Yrl~p~~~---------~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~ 180 (308)
T d1u4na_ 110 DYRLAPEHK---------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLI 180 (308)
T ss_dssp CCCCTTTSC---------TTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEE
T ss_pred ccccccccc---------cccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccc
Confidence 998543322 222333433333322 2 2479999999999999888776443 35566666
Q ss_pred ccC
Q 015550 159 NVT 161 (405)
Q Consensus 159 ~~~ 161 (405)
.+.
T Consensus 181 ~~~ 183 (308)
T d1u4na_ 181 YPS 183 (308)
T ss_dssp SCC
T ss_pred ccc
Confidence 655
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.09 E-value=1.3e-08 Score=90.12 Aligned_cols=118 Identities=21% Similarity=0.208 Sum_probs=81.2
Q ss_pred CCEEEEEEEccCCCCeEEEEecCCCC--CCchhh---hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCC
Q 015550 23 NGIKIFYRTYGRGPTKVILITGLAGT--HDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (405)
Q Consensus 23 ~g~~i~y~~~G~~~p~vvllHG~~~~--~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G 97 (405)
-|.+|.....+.+.|+|+|+||.++. ...|.. +.+.+.+ .++.|+.+|-...+
T Consensus 16 ~~r~i~~~~~~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~----------------------~~~ivV~P~~~~~~ 73 (280)
T d1dqza_ 16 MGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQ----------------------SGLSVIMPVGGQSS 73 (280)
T ss_dssp TTEEEEEEEECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTT----------------------SSSEEEEECCCTTC
T ss_pred CCCcceEEeeCCCCCEEEECCCCCCCCccchhhhcchHHHHHHh----------------------CCcEEEEECCCCCC
Confidence 35677776677777899999998764 345653 2234444 49999999853222
Q ss_pred CCCC---C----CCCCCCCHHH-HHHHHHHHHHHh---CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 98 RSSV---P----VKKTEYTTKI-MAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 98 ~S~~---~----~~~~~~~~~~-~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.... + ........++ +++++...+++. +.+++.+.|+||||..|+.+|.++|+++.+++.+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~ 149 (280)
T d1dqza_ 74 FYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp TTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred cCccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCcc
Confidence 1110 0 1111234444 467787777654 44578999999999999999999999999999999763
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.09 E-value=1.2e-08 Score=90.54 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=78.2
Q ss_pred CCEEEEEEEc-c-CCCCeEEEEecCCCCCCc--hhh---hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCC
Q 015550 23 NGIKIFYRTY-G-RGPTKVILITGLAGTHDA--WGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (405)
Q Consensus 23 ~g~~i~y~~~-G-~~~p~vvllHG~~~~~~~--~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G 95 (405)
.|..+.+... + ..-|+|+++||++++.+. |.. +.+.+.+ .++.|+.++..+
T Consensus 19 ~~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~----------------------~~~~~v~~~~~~ 76 (288)
T d1sfra_ 19 MGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQ----------------------SGLSVVMPVGGQ 76 (288)
T ss_dssp TTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTT----------------------SSCEEEEECCCT
T ss_pred CCcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHh----------------------CCCEEEEeccCC
Confidence 3555555443 2 345789999998876543 432 2344444 489999999877
Q ss_pred CCCCCCCCCC-------CCCCHH-HHHHHHHHHHHH-h--CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCC
Q 015550 96 MGRSSVPVKK-------TEYTTK-IMAKDVIALMDH-L--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (405)
Q Consensus 96 ~G~S~~~~~~-------~~~~~~-~~~~dl~~~l~~-l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (405)
.+........ .....+ .+++++...++. + +.+++.+.|+||||..|+.+|.++|+++.+++.+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~ 154 (288)
T d1sfra_ 77 SSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (288)
T ss_dssp TCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred CCCCccccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcc
Confidence 6544322111 012223 345666666654 3 34579999999999999999999999999999998763
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.03 E-value=2.6e-10 Score=99.86 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=79.5
Q ss_pred eEEEEecCCCCC---CchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHHHH
Q 015550 38 KVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (405)
Q Consensus 38 ~vvllHG~~~~~---~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (405)
||||+||++++. ..|..+.+.+.+.. .|+.|++++......+..... ....+.+++
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~--------------------pG~~V~~l~~g~~~~~~~~~~-~~~~~~~~~ 65 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKI--------------------PGIHVLSLEIGKTLREDVENS-FFLNVNSQV 65 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHS--------------------TTCCEEECCCSSSHHHHHHHH-HHSCHHHHH
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHC--------------------CCeEEEEEEcCCCcccccccc-hhhhHHHHH
Confidence 799999998764 35677666665411 289999999765433211110 112456677
Q ss_pred HHHHHHHHHh--CCccEEEEEEChhHHHHHHHHHhCCc-ccceEEEeccCCCCCCCCcc
Q 015550 115 KDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPK 170 (405)
Q Consensus 115 ~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~ 170 (405)
+.+.+.++.. +.+++++|||||||.++-.++.++++ +|..+|.++++..|....|.
T Consensus 66 e~v~~~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~Gv~~~p~ 124 (279)
T d1ei9a_ 66 TTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPR 124 (279)
T ss_dssp HHHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTCBCSCTT
T ss_pred HHHHHHHHhccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCCCccCCcc
Confidence 7777766643 33689999999999999999999885 59999999999877765554
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.02 E-value=7e-09 Score=91.19 Aligned_cols=63 Identities=11% Similarity=-0.018 Sum_probs=47.3
Q ss_pred CCcEEEEeecCCccCCHHHHHHHHHHh----------CCCeEEEEcCC-CccccccCH--HHHHHHHHHHHHhhcC
Q 015550 261 GFLVSVIHGRHDVIAQICYARRLAEKL----------YPVARMIDLPG-GHLVSHERT--EEVNQALIDLIKASEK 323 (405)
Q Consensus 261 ~~Pvlvi~G~~D~~~~~~~~~~l~~~l----------~~~~~l~~~~g-gH~~~~e~p--~~v~~~i~~fl~~~~~ 323 (405)
..|+|++||++|..+|+..+.++.+.| ...++++++++ ||.+.-... .+....+.+||++...
T Consensus 200 ~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~ 275 (280)
T d1qfma2 200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 275 (280)
T ss_dssp CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 348999999999999999999998887 33478999998 996543222 2333456789988754
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.96 E-value=5.6e-09 Score=90.60 Aligned_cols=50 Identities=18% Similarity=0.229 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHh-----CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 112 IMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 112 ~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.+.+++..+++.. +.+++.++|+||||..|+.++.++|+++.+++.+++.
T Consensus 103 ~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~ 157 (246)
T d3c8da2 103 AVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGS 157 (246)
T ss_dssp HHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCC
T ss_pred HHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcc
Confidence 3445666666653 2257999999999999999999999999999999986
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.94 E-value=4.4e-09 Score=97.75 Aligned_cols=121 Identities=13% Similarity=-0.057 Sum_probs=80.2
Q ss_pred cccCCEEEEEEEcc---CCC-CeEEEEecCCCC--------CC----chhhhHhhhcCCCCCCCCchhhhccccCCCCCC
Q 015550 20 LNDNGIKIFYRTYG---RGP-TKVILITGLAGT--------HD----AWGPQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (405)
Q Consensus 20 ~~~~g~~i~y~~~G---~~~-p~vvllHG~~~~--------~~----~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~ 83 (405)
..-||++|+...+- .++ |+||+.|+++.. .. ........|++
T Consensus 34 pmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~---------------------- 91 (385)
T d2b9va2 34 PMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVE---------------------- 91 (385)
T ss_dssp ECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHH----------------------
T ss_pred ECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHh----------------------
Confidence 44589999976653 333 556666766421 01 11233345555
Q ss_pred CCeEEEEecCCCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHHh----CC--ccEEEEEEChhHHHHHHHHHhCC
Q 015550 84 AGIEVCAFDNRGMGRSSVPVKKT--------EYTTKIMAKDVIALMDHL----GW--KQAHVFGHSMGAMIACKLAAMVP 149 (405)
Q Consensus 84 ~g~~Vi~~D~~G~G~S~~~~~~~--------~~~~~~~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p 149 (405)
+||.|+.+|.||+|.|....... .+.. ..++|..++++.+ .+ .+|.++|+|+||.+++.+|...|
T Consensus 92 ~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~-~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~ 170 (385)
T d2b9va2 92 GGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKT-DETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH 170 (385)
T ss_dssp TTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSC-CHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC
T ss_pred CCcEEEEEcCCcccCCCCceeeccccccccccchh-hHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccC
Confidence 59999999999999998643211 1111 1245555555443 23 47999999999999999999988
Q ss_pred cccceEEEeccCCC
Q 015550 150 ERVLSLALLNVTGG 163 (405)
Q Consensus 150 ~~v~~lvl~~~~~~ 163 (405)
..++.+|...+...
T Consensus 171 ~~l~a~~~~~~~~d 184 (385)
T d2b9va2 171 PALKVAAPESPMVD 184 (385)
T ss_dssp TTEEEEEEEEECCC
T ss_pred CcceEEEEeccccc
Confidence 89999998877643
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.91 E-value=9.4e-10 Score=98.64 Aligned_cols=108 Identities=15% Similarity=0.269 Sum_probs=71.2
Q ss_pred CCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.+|++|++|||.++... | ..+...+... .+++||++|+.... +. .-......+..
T Consensus 69 ~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~---------------------~d~NVI~VDW~~~a-~~-~Y~~a~~n~~~ 125 (337)
T d1rp1a2 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKV---------------------EEVNCICVDWKKGS-QT-SYTQAANNVRV 125 (337)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTT---------------------CCEEEEEEECHHHH-SS-CHHHHHHHHHH
T ss_pred CCCEEEEeCCCcCCCCcchHHHHHHHHHhc---------------------CCceEEEEeecccc-Cc-chHHHHHHHHH
Confidence 56899999999877653 3 3444444432 37999999997532 11 00001113344
Q ss_pred HHHHHHHHHH----HhC--CccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 113 MAKDVIALMD----HLG--WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 113 ~~~dl~~~l~----~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
..+.+..+++ ..+ .++++|||||+||.+|-.++. +..++..++.++|+.+.+.
T Consensus 126 Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~-~~~~l~rItgLDPA~P~F~ 184 (337)
T d1rp1a2 126 VGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGS-RTPGLGRITGLDPVEASFQ 184 (337)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHH-TSTTCCEEEEESCCCTTTT
T ss_pred HHHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHHH-hhccccceeccCCCccccC
Confidence 4455555544 334 479999999999999975555 4568999999999976654
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.89 E-value=1.4e-09 Score=97.32 Aligned_cols=109 Identities=18% Similarity=0.313 Sum_probs=75.9
Q ss_pred CCCeEEEEecCCCCCCc-h-hhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCCCCCCHHH
Q 015550 35 GPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (405)
Q Consensus 35 ~~p~vvllHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (405)
.+|+++++|||.++... | ..+...+... ..++||++|+...... .-......+..
T Consensus 69 ~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~---------------------~d~NVi~VDW~~~a~~--~Y~~a~~n~~~ 125 (338)
T d1bu8a2 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQV---------------------EKVNCICVDWRRGSRT--EYTQASYNTRV 125 (338)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTT---------------------CCEEEEEEECHHHHSS--CHHHHHHHHHH
T ss_pred CCceEEEeCcccCCCCcccHHHHHHHHHhc---------------------CCceEEEEechhhccc--chHHHHHhHHH
Confidence 45789999999877654 3 4444444432 3799999999754221 10001123445
Q ss_pred HHHHHHHHHHHh------CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccCCCCCC
Q 015550 113 MAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (405)
Q Consensus 113 ~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (405)
..+.+..+++.+ ..++++|||||+||.+|-.++...+.+|..++.++|+.+.+.
T Consensus 126 Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~F~ 185 (338)
T d1bu8a2 126 VGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCFQ 185 (338)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCccc
Confidence 555555555443 347999999999999999999998889999999999976654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=4.1e-07 Score=85.92 Aligned_cols=133 Identities=15% Similarity=0.090 Sum_probs=84.0
Q ss_pred CCEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhhhcC-CCCCCCCchhhhccccCCCCCCCCeEEEEecCC-C
Q 015550 23 NGIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKGLAG-TDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-G 95 (405)
Q Consensus 23 ~g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-G 95 (405)
++.+|+|.-... ..|.++.+.|.+|++..|..+.+. .. +.. .|.....+. ..---+-.+++-+|.| |
T Consensus 30 ~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~-GP~~v~---~~~~~~~~N--~~SW~~~anllfIDqPvG 103 (452)
T d1ivya_ 30 GSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEH-GPFLVQ---PDGVTLEYN--PYSWNLIANVLYLESPAG 103 (452)
T ss_dssp TTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTT-SSEEEC---TTSSCEEEC--TTCGGGSSEEEEECCSTT
T ss_pred CCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHcc-CCcEEc---CCCCeeccC--CcchhcccCEEEEecCCC
Confidence 466888877653 357899999999999888554421 11 000 000000000 0000124679999976 9
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHh----CCcccceEEEeccC
Q 015550 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----VPERVLSLALLNVT 161 (405)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~ 161 (405)
.|.|.........+..+.+.|+.+++..+ ...+++|.|-|+||..+-.+|.. .+-.++++++.++.
T Consensus 104 tGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 104 VGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred cccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 99996544333456667777776655433 33589999999999988888764 22348999998876
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.60 E-value=3.5e-06 Score=78.59 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=83.1
Q ss_pred CEEEEEEEccC-----CCCeEEEEecCCCCCCchhhhHhh----hcCCCCCCCCchhhhccccCCCCCCCCeEEEEec-C
Q 015550 24 GIKIFYRTYGR-----GPTKVILITGLAGTHDAWGPQLKG----LAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD-N 93 (405)
Q Consensus 24 g~~i~y~~~G~-----~~p~vvllHG~~~~~~~~~~~~~~----L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D-~ 93 (405)
+.+++|.-... .+|.||.+.|.+|++..|..+.+. +.......+.+-+| -+-.+++-+| .
T Consensus 27 ~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW----------~~~anllfiD~P 96 (421)
T d1wpxa1 27 DKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSW----------NSNATVIFLDQP 96 (421)
T ss_dssp CCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCG----------GGSSEEEEECCS
T ss_pred CceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCccc----------ccccCEEEEecC
Confidence 56788865543 357899999999999887655521 10000000000001 0246899999 5
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---------CCccEEEEEEChhHHHHHHHHHhC---C---cccceEEEe
Q 015550 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---------GWKQAHVFGHSMGAMIACKLAAMV---P---ERVLSLALL 158 (405)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~l---------~~~~v~lvGhS~Gg~ia~~~a~~~---p---~~v~~lvl~ 158 (405)
-|.|.|..... ...+..+.++|+.+++..+ ...+++|.|-|+||..+-.+|... . -.++++++.
T Consensus 97 vGtGfSy~~~~-~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iG 175 (421)
T d1wpxa1 97 VNVGFSYSGSS-GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIG 175 (421)
T ss_dssp TTSTTCBCSSC-CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEE
T ss_pred CCCCceecCCc-cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEec
Confidence 59999964443 2457777788887777543 234799999999999888887542 2 247799998
Q ss_pred ccCC
Q 015550 159 NVTG 162 (405)
Q Consensus 159 ~~~~ 162 (405)
++..
T Consensus 176 ng~~ 179 (421)
T d1wpxa1 176 NGLT 179 (421)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 8764
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.51 E-value=2.5e-06 Score=74.30 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=33.9
Q ss_pred CCccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
+.+++.+.|+||||..++.+|.++|+++.+++.+++.
T Consensus 142 d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~ 178 (273)
T d1wb4a1 142 SRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 178 (273)
T ss_dssp TGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred CccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcc
Confidence 3457999999999999999999999999999999876
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.49 E-value=2.6e-07 Score=82.45 Aligned_cols=45 Identities=13% Similarity=0.089 Sum_probs=36.4
Q ss_pred cCCcEEEEeecCCccCCHHHHHHHHHHhC---C--CeEEEEcCC-Cccccc
Q 015550 260 AGFLVSVIHGRHDVIAQICYARRLAEKLY---P--VARMIDLPG-GHLVSH 304 (405)
Q Consensus 260 i~~Pvlvi~G~~D~~~~~~~~~~l~~~l~---~--~~~l~~~~g-gH~~~~ 304 (405)
.+.|++++||.+|..+|+..++++.+.+. + +.+++..++ ||...-
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 34799999999999999999999998872 2 456677788 997653
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.41 E-value=2.1e-07 Score=84.93 Aligned_cols=98 Identities=20% Similarity=0.250 Sum_probs=72.2
Q ss_pred CeEEEEecCCCCC-------Cchhh----hHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCCCCCCCCCCCCC
Q 015550 37 TKVILITGLAGTH-------DAWGP----QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (405)
Q Consensus 37 p~vvllHG~~~~~-------~~~~~----~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~G~G~S~~~~~~ 105 (405)
-||||+||+.+-. .+|.- +.+.|.. .|++|++.....
T Consensus 8 yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~----------------------~G~~V~~~~V~p---------- 55 (388)
T d1ku0a_ 8 APIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLND----------------------NGYRTYTLAVGP---------- 55 (388)
T ss_dssp CCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHH----------------------TTCCEEECCCCS----------
T ss_pred CCEEEeCCcccCCccccCcccccCCchhhhHHHHHh----------------------CCCEEEEeccCC----------
Confidence 3699999986542 34543 5566765 499999998753
Q ss_pred CCCCHHHHHHHHHHHHHHh----CC-------------------------ccEEEEEEChhHHHHHHHHHhCCc------
Q 015550 106 TEYTTKIMAKDVIALMDHL----GW-------------------------KQAHVFGHSMGAMIACKLAAMVPE------ 150 (405)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~l----~~-------------------------~~v~lvGhS~Gg~ia~~~a~~~p~------ 150 (405)
.-+.++-++.+...++.. |. +||+||||||||..+-.++...|+
T Consensus 56 -~~S~~~RA~eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~ 134 (388)
T d1ku0a_ 56 -LSSNWDRACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEER 134 (388)
T ss_dssp -SBCHHHHHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHH
T ss_pred -ccCHHHHHHHHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhcccccccc
Confidence 236777788888887642 11 489999999999999988875443
Q ss_pred -------------------ccceEEEeccCCCCCCC
Q 015550 151 -------------------RVLSLALLNVTGGGFQC 167 (405)
Q Consensus 151 -------------------~v~~lvl~~~~~~~~~~ 167 (405)
.|++|+.++++..+...
T Consensus 135 ~~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH~GS~~ 170 (388)
T d1ku0a_ 135 EYAKEHNVSLSPLFEGGHRFVLSVTTIATPHDGTTL 170 (388)
T ss_dssp HHHHHHTCCCCGGGTCCCCCEEEEEEESCCTTCCGG
T ss_pred ccccccccccccccccCCcceEEEEeccCCCCCcch
Confidence 69999999998766543
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.35 E-value=7.4e-06 Score=72.40 Aligned_cols=49 Identities=20% Similarity=0.137 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHh-CC---------ccEEEEEEChhHHHHHHHHHh--CCcccceEEEeccC
Q 015550 113 MAKDVIALMDHL-GW---------KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVT 161 (405)
Q Consensus 113 ~~~dl~~~l~~l-~~---------~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 161 (405)
+.+++..+++.. .. .+..|.||||||.-|+.+|.+ +|++..+++.+++.
T Consensus 129 i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~ 189 (299)
T d1pv1a_ 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred HHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCc
Confidence 456777777653 22 368999999999999999986 48899998888875
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=6.3e-07 Score=77.99 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=27.4
Q ss_pred ccEEEEEEChhHHHHHHHHHhCCcccceEEEeccC
Q 015550 127 KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (405)
Q Consensus 127 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (405)
.++.++||||||..++.++.+ ++.+.+++.+++.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 468999999999999987665 5677888877764
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.31 E-value=7.6e-05 Score=70.47 Aligned_cols=121 Identities=16% Similarity=0.089 Sum_probs=73.3
Q ss_pred CCeEEEEecCCCCCCchhhhHhhhcCCCCCCCCchhhhccccCCCCCCCCeEEEEecCC-CCCCCCCCCC--------CC
Q 015550 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-GMGRSSVPVK--------KT 106 (405)
Q Consensus 36 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~g~~Vi~~D~~-G~G~S~~~~~--------~~ 106 (405)
.|.+|.+.|.+|++..+..+.+ ..... ++.|.. .... ..-=-+-.+++-+|.| |.|.|-.... ..
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E-~GP~~--v~~~~~-l~~N--p~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~ 140 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVE-SGPFR--VNSDGK-LYLN--EGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKF 140 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHS-SSSEE--ECTTSC-EEEC--TTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSS
T ss_pred CCEEEEECCCCcHHHHHHHHHc-cCCeE--ECCCCc-eeeC--CCcccccCCEEEEeCCCCcCeeecCCCCccccccccc
Confidence 3789999999999988754432 11100 000000 0000 0000025679999975 9999954321 12
Q ss_pred CCCHHHHHHHHHHHHHHh-------CCccEEEEEEChhHHHHHHHHHhC------------CcccceEEEeccCC
Q 015550 107 EYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV------------PERVLSLALLNVTG 162 (405)
Q Consensus 107 ~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~------------p~~v~~lvl~~~~~ 162 (405)
..+.++.++++..++... ...+++|.|-|+||..+-.+|... +-.++++++.++..
T Consensus 141 ~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~ 215 (483)
T d1ac5a_ 141 DEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWI 215 (483)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCcc
Confidence 345677777777776643 335899999999999888877542 12478888887653
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.003 Score=59.83 Aligned_cols=78 Identities=13% Similarity=0.087 Sum_probs=50.3
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHHHH---HHHHHHHhC--CccEEEEEEChhHHHHHHHHHh--CCcccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKD---VIALMDHLG--WKQAHVFGHSMGAMIACKLAAM--VPERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~d---l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~ 153 (405)
+.-|+.+++| |+-.+........+-+.|+... +.+-|..+| .++|.|+|||.||..+..+... ....+.
T Consensus 142 ~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~ 221 (532)
T d2h7ca1 142 NVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFH 221 (532)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCS
T ss_pred ceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcch
Confidence 8899999998 4433322222224445554443 334444454 3589999999999988777654 234688
Q ss_pred eEEEeccCC
Q 015550 154 SLALLNVTG 162 (405)
Q Consensus 154 ~lvl~~~~~ 162 (405)
++|+.++..
T Consensus 222 raI~~SG~~ 230 (532)
T d2h7ca1 222 RAISESGVA 230 (532)
T ss_dssp EEEEESCCT
T ss_pred hhhhhcccc
Confidence 999998764
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.23 E-value=0.0043 Score=58.81 Aligned_cols=78 Identities=15% Similarity=0.024 Sum_probs=50.2
Q ss_pred CeEEEEecCC----CCCCCCCC-CCCCCCCHHHHHH---HHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC--Cccc
Q 015550 85 GIEVCAFDNR----GMGRSSVP-VKKTEYTTKIMAK---DVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PERV 152 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~-~~~~~~~~~~~~~---dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v 152 (405)
+.-|+.+++| |+-.+... .....+-+.|+.. .+.+-|..+| .++|.|+|||.||..+..+.... ...+
T Consensus 143 ~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF 222 (542)
T d2ha2a1 143 GAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLF 222 (542)
T ss_dssp CCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTC
T ss_pred cceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHh
Confidence 8999999999 55333211 1112334444443 3334444554 35799999999999988776543 2468
Q ss_pred ceEEEeccCC
Q 015550 153 LSLALLNVTG 162 (405)
Q Consensus 153 ~~lvl~~~~~ 162 (405)
.++|+.++..
T Consensus 223 ~~aI~~SG~~ 232 (542)
T d2ha2a1 223 HRAVLQSGTP 232 (542)
T ss_dssp SEEEEESCCS
T ss_pred hhheeecccc
Confidence 8999998764
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=96.19 E-value=0.0045 Score=57.80 Aligned_cols=78 Identities=21% Similarity=0.162 Sum_probs=49.9
Q ss_pred CeEEEEecCC----CCCCCCC--CCCCCCCCHHHHHHH---HHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC--Ccc
Q 015550 85 GIEVCAFDNR----GMGRSSV--PVKKTEYTTKIMAKD---VIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PER 151 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~--~~~~~~~~~~~~~~d---l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~ 151 (405)
+.-|+.+++| |+=.... ......+-+.|+... +.+-|.++| .++|.|+|||.||..+..+.... ...
T Consensus 127 ~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gL 206 (483)
T d1qe3a_ 127 EVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGL 206 (483)
T ss_dssp TCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS
T ss_pred ceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCc
Confidence 7899999998 4432111 111124445555443 334444454 35799999999999887776542 246
Q ss_pred cceEEEeccCC
Q 015550 152 VLSLALLNVTG 162 (405)
Q Consensus 152 v~~lvl~~~~~ 162 (405)
+.++|+.++..
T Consensus 207 F~raI~~SGs~ 217 (483)
T d1qe3a_ 207 FQKAIMESGAS 217 (483)
T ss_dssp CSEEEEESCCC
T ss_pred ceeeccccCCc
Confidence 99999999764
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=96.19 E-value=0.0035 Score=59.38 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=49.6
Q ss_pred CeEEEEecCC----CCCCCCC-CCCCCCCCHHHHHHH---HHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC--Cccc
Q 015550 85 GIEVCAFDNR----GMGRSSV-PVKKTEYTTKIMAKD---VIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV--PERV 152 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~-~~~~~~~~~~~~~~d---l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v 152 (405)
+.-|+.+++| |+-.... ......+-+.|+... +.+-|..+| .++|.|+|||.||..+..+.... ...+
T Consensus 137 ~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF 216 (532)
T d1ea5a_ 137 EVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLF 216 (532)
T ss_dssp TCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTC
T ss_pred CccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhh
Confidence 8999999998 4433321 111123445554433 334444454 35899999999999877766532 2468
Q ss_pred ceEEEeccCCC
Q 015550 153 LSLALLNVTGG 163 (405)
Q Consensus 153 ~~lvl~~~~~~ 163 (405)
.++|+.++...
T Consensus 217 ~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 217 RRAILQSGSPN 227 (532)
T ss_dssp SEEEEESCCTT
T ss_pred hhheeeccccc
Confidence 99999887643
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.07 E-value=0.008 Score=57.47 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=50.4
Q ss_pred CeEEEEecCC----CCCCCCCCCCCCCCCHHHHHHHH---HHHHHHhC--CccEEEEEEChhHHHHHHHHHh--CCcccc
Q 015550 85 GIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKDV---IALMDHLG--WKQAHVFGHSMGAMIACKLAAM--VPERVL 153 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~dl---~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~ 153 (405)
+.-|+.+++| |+-.+........+-+.|+...+ .+-|.++| .++|.|+|||.||..+..+... ....+.
T Consensus 135 ~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~ 214 (579)
T d2bcea_ 135 NVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIK 214 (579)
T ss_dssp TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCS
T ss_pred CEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccc
Confidence 6889999998 44332222222344555555444 34444454 3579999999999988776554 235689
Q ss_pred eEEEeccCC
Q 015550 154 SLALLNVTG 162 (405)
Q Consensus 154 ~lvl~~~~~ 162 (405)
+.|+.++..
T Consensus 215 raI~~SGs~ 223 (579)
T d2bcea_ 215 RAISQSGVG 223 (579)
T ss_dssp EEEEESCCT
T ss_pred cceeccCCc
Confidence 999998654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=95.97 E-value=0.0088 Score=56.29 Aligned_cols=78 Identities=15% Similarity=0.030 Sum_probs=47.3
Q ss_pred CeEEEEecCC----CCCCCCC--CCCCCCCCHHHHHH---HHHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC----C
Q 015550 85 GIEVCAFDNR----GMGRSSV--PVKKTEYTTKIMAK---DVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV----P 149 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~~--~~~~~~~~~~~~~~---dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~----p 149 (405)
+.-|+.+++| |+=.+.. ......+-+.|+.. .+.+-|..+| .++|.|+|||.||..+....... .
T Consensus 128 ~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~ 207 (517)
T d1ukca_ 128 VIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDE 207 (517)
T ss_dssp CCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCC
T ss_pred ccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccc
Confidence 6888999998 3322211 01112344444443 3334444454 35799999999999776554331 2
Q ss_pred cccceEEEeccCC
Q 015550 150 ERVLSLALLNVTG 162 (405)
Q Consensus 150 ~~v~~lvl~~~~~ 162 (405)
..+.++|+.++..
T Consensus 208 gLF~raI~qSg~~ 220 (517)
T d1ukca_ 208 GLFIGAIVESSFW 220 (517)
T ss_dssp SSCSEEEEESCCC
T ss_pred cccceeeeccccc
Confidence 3689999998764
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.015 Score=54.71 Aligned_cols=78 Identities=17% Similarity=0.036 Sum_probs=48.3
Q ss_pred CeEEEEecCC----CCCCCC-CCCCCCCCCHHHHHH---HHHHHHHHhC--CccEEEEEEChhHHHHHHHHHh--CCccc
Q 015550 85 GIEVCAFDNR----GMGRSS-VPVKKTEYTTKIMAK---DVIALMDHLG--WKQAHVFGHSMGAMIACKLAAM--VPERV 152 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~-~~~~~~~~~~~~~~~---dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~--~p~~v 152 (405)
+.-|+.+++| |+-..+ .......+-+.|+.. .+.+-|+.+| .++|.|+|+|.||..+..+... ....+
T Consensus 135 ~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf 214 (526)
T d1p0ia_ 135 RVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLF 214 (526)
T ss_dssp CCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGC
T ss_pred ceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhh
Confidence 8899999998 333221 111112344554443 3334444554 3589999999999987665543 23468
Q ss_pred ceEEEeccCC
Q 015550 153 LSLALLNVTG 162 (405)
Q Consensus 153 ~~lvl~~~~~ 162 (405)
.++|+.++..
T Consensus 215 ~~aI~~Sg~~ 224 (526)
T d1p0ia_ 215 TRAILQSGSF 224 (526)
T ss_dssp SEEEEESCCT
T ss_pred hhhhcccccc
Confidence 8889888664
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=95.60 E-value=0.021 Score=53.85 Aligned_cols=79 Identities=15% Similarity=-0.017 Sum_probs=46.6
Q ss_pred CCeEEEEecCC----CCCCCC--CCCCCCCCCHHHHHH---HHHHHHHHhC--CccEEEEEEChhHHHHHHHHH-hC---
Q 015550 84 AGIEVCAFDNR----GMGRSS--VPVKKTEYTTKIMAK---DVIALMDHLG--WKQAHVFGHSMGAMIACKLAA-MV--- 148 (405)
Q Consensus 84 ~g~~Vi~~D~~----G~G~S~--~~~~~~~~~~~~~~~---dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~-~~--- 148 (405)
+++-|+.+++| |+-... .......+-+.|+.. .+.+-|..+| .++|.|+|||.||..+..... ..
T Consensus 147 ~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~ 226 (534)
T d1llfa_ 147 KPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDN 226 (534)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCC
T ss_pred CCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhcccccc
Confidence 48999999999 333221 000011334444443 3334444454 358999999999996654443 21
Q ss_pred -C---cccceEEEeccCC
Q 015550 149 -P---ERVLSLALLNVTG 162 (405)
Q Consensus 149 -p---~~v~~lvl~~~~~ 162 (405)
| ..+.++|+.++..
T Consensus 227 sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 227 TYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp EETTEESCSEEEEESCCS
T ss_pred ccchhhhhhhhhhccCcc
Confidence 1 2489999998753
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=95.40 E-value=0.0093 Score=56.51 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=49.1
Q ss_pred CCeEEEEecCC----CCCCCCC--CCCCCCCCHHHHHHH---HHHHHHHhC--CccEEEEEEChhHHHHHHHHHhC----
Q 015550 84 AGIEVCAFDNR----GMGRSSV--PVKKTEYTTKIMAKD---VIALMDHLG--WKQAHVFGHSMGAMIACKLAAMV---- 148 (405)
Q Consensus 84 ~g~~Vi~~D~~----G~G~S~~--~~~~~~~~~~~~~~d---l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~---- 148 (405)
.+.-|+++++| |+-.... ......+-+.|+... +.+-|.++| .++|.|+|||.||..+..+....
T Consensus 155 ~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~ 234 (544)
T d1thga_ 155 QPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDN 234 (544)
T ss_dssp CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCC
T ss_pred CCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCc
Confidence 38999999998 4433211 000113444444443 334444454 35899999999998776665432
Q ss_pred ----CcccceEEEeccCCC
Q 015550 149 ----PERVLSLALLNVTGG 163 (405)
Q Consensus 149 ----p~~v~~lvl~~~~~~ 163 (405)
...+.++|+.++...
T Consensus 235 ~~~s~gLF~raI~qSG~~~ 253 (544)
T d1thga_ 235 TYNGKKLFHSAILQSGGPL 253 (544)
T ss_dssp EETTEESCSEEEEESCCCC
T ss_pred ccchhhhhccccccccccc
Confidence 246899999997643
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=94.99 E-value=0.016 Score=49.16 Aligned_cols=29 Identities=21% Similarity=0.151 Sum_probs=22.5
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHh
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+.++.....++++.|||+||.+|..+|..
T Consensus 124 ~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 124 DQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 34444455689999999999999988764
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=94.98 E-value=0.017 Score=49.10 Aligned_cols=28 Identities=21% Similarity=0.102 Sum_probs=21.6
Q ss_pred HHHHhCCccEEEEEEChhHHHHHHHHHh
Q 015550 120 LMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 120 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
+++.....++++.|||+||.+|..+|..
T Consensus 126 ~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 126 QLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHhhCCCceEEEEecccchHHHHHHHHH
Confidence 3333345689999999999999988864
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=94.91 E-value=0.018 Score=48.72 Aligned_cols=29 Identities=31% Similarity=0.241 Sum_probs=22.2
Q ss_pred HHHHHhCCccEEEEEEChhHHHHHHHHHh
Q 015550 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 119 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
.+++.....++++.|||+||.+|..+|..
T Consensus 117 ~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 117 QQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 33334445689999999999999988765
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=94.75 E-value=0.015 Score=49.50 Aligned_cols=23 Identities=35% Similarity=0.325 Sum_probs=19.9
Q ss_pred CCccEEEEEEChhHHHHHHHHHh
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAM 147 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~ 147 (405)
...++++.|||+||.+|..+|..
T Consensus 135 ~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 135 PNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred CCceEEEeccchHHHHHHHHHHH
Confidence 44589999999999999988865
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=94.70 E-value=0.022 Score=48.46 Aligned_cols=24 Identities=25% Similarity=0.225 Sum_probs=20.5
Q ss_pred CCccEEEEEEChhHHHHHHHHHhC
Q 015550 125 GWKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 125 ~~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
...++++.|||+||.+|..++...
T Consensus 136 ~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 136 PDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHH
T ss_pred CCcceeeeccchHHHHHHHHHHHH
Confidence 445899999999999999998753
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.69 E-value=0.026 Score=53.60 Aligned_cols=78 Identities=15% Similarity=0.026 Sum_probs=46.6
Q ss_pred CeEEEEecCC----CCCCCC-------CCCCCCCCCHHHHHHHHH---HHHHHhC--CccEEEEEEChhHHHHHHHHHhC
Q 015550 85 GIEVCAFDNR----GMGRSS-------VPVKKTEYTTKIMAKDVI---ALMDHLG--WKQAHVFGHSMGAMIACKLAAMV 148 (405)
Q Consensus 85 g~~Vi~~D~~----G~G~S~-------~~~~~~~~~~~~~~~dl~---~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~ 148 (405)
+.-|+++++| |+=... .......+-+.|+...+. +-|..+| .++|.|+|||.||..+..+....
T Consensus 170 ~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp 249 (571)
T d1dx4a_ 170 NVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP 249 (571)
T ss_dssp TCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT
T ss_pred CeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccc
Confidence 5788899987 332111 111112344555544333 3333444 35899999999999887665542
Q ss_pred --CcccceEEEeccCC
Q 015550 149 --PERVLSLALLNVTG 162 (405)
Q Consensus 149 --p~~v~~lvl~~~~~ 162 (405)
...+.++|+.++..
T Consensus 250 ~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 250 VTRGLVKRGMMQSGTM 265 (571)
T ss_dssp TTTTSCCEEEEESCCT
T ss_pred cccccccccceecccc
Confidence 24588888887654
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=93.56 E-value=0.1 Score=41.76 Aligned_cols=52 Identities=15% Similarity=0.029 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhCC----cccceEEEeccC
Q 015550 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVT 161 (405)
Q Consensus 110 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~ 161 (405)
...+.+.+.+....-...+++|+|+|+|+.++-.++...+ ++|.++++++-+
T Consensus 79 ~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 79 IREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 3445555556666656679999999999999988887653 579999999854
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=89.51 E-value=0.26 Score=39.64 Aligned_cols=76 Identities=16% Similarity=0.021 Sum_probs=46.1
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCC--CHHH----HHHHHHHHHHHhCCccEEEEEEChhHHHHHHHHHhC----------
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEY--TTKI----MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV---------- 148 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~--~~~~----~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~---------- 148 (405)
+..+..+++|..-....... ..| |..+ +.+.+.+..++-.-.+++|+|+|+|+.++-.++...
T Consensus 35 ~~~~~~v~YPA~~~~~~~~~-~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~ 113 (207)
T d1qoza_ 35 GTTSEAIVYPACGGQASCGG-ISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNT 113 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCC
T ss_pred CCeEEEeeeccccccccccc-ccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccC
Confidence 67788889887533211110 122 2233 333344444444556999999999999998876421
Q ss_pred --------CcccceEEEeccC
Q 015550 149 --------PERVLSLALLNVT 161 (405)
Q Consensus 149 --------p~~v~~lvl~~~~ 161 (405)
.++|.+++|++-+
T Consensus 114 ~~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 114 AVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp SCCSCHHHHHHEEEEEEESCT
T ss_pred CCCCChhhhhcEEEEEEEeCC
Confidence 1368888888744
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=88.63 E-value=0.33 Score=39.02 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=45.0
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHH----HhCCccEEEEEEChhHHHHHHHHHh-----------
Q 015550 85 GIEVCAFDNRGMGRSSVPVKKTEY--TTKIMAKDVIALMD----HLGWKQAHVFGHSMGAMIACKLAAM----------- 147 (405)
Q Consensus 85 g~~Vi~~D~~G~G~S~~~~~~~~~--~~~~~~~dl~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~~----------- 147 (405)
+-.+..+++|......... ...| +..+=+..+...+. +-.-.+++|+|+|+|+.++-.++..
T Consensus 35 ~~~~~~v~YpA~~~~~~~~-~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~ 113 (207)
T d1g66a_ 35 GSTAEAINYPACGGQSSCG-GASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNT 113 (207)
T ss_dssp TCEEEECCCCCCSSCGGGT-SCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCC
T ss_pred CCeeEEecccccccccccc-cccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCcccccccc
Confidence 5577888888643221111 1122 33333334444443 4455699999999999999877642
Q ss_pred -------CCcccceEEEeccC
Q 015550 148 -------VPERVLSLALLNVT 161 (405)
Q Consensus 148 -------~p~~v~~lvl~~~~ 161 (405)
..++|.++++++-+
T Consensus 114 ~~~l~~~~~~~v~avvl~GdP 134 (207)
T d1g66a_ 114 AVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp SCCSCHHHHHHEEEEEEESCT
T ss_pred ccCCCchhhhceeeEEEecCC
Confidence 11367788888754
|