Citrus Sinensis ID: 015758
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 401 | 2.2.26 [Sep-21-2011] | |||||||
| P49243 | 404 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.995 | 0.987 | 0.75 | 1e-172 | |
| P49244 | 400 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.997 | 1.0 | 0.733 | 1e-172 | |
| Q07510 | 405 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.997 | 0.987 | 0.726 | 1e-168 | |
| P49245 | 402 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.995 | 0.992 | 0.722 | 1e-168 | |
| B0JXE2 | 333 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.805 | 0.969 | 0.566 | 1e-103 | |
| B0CE67 | 332 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.807 | 0.975 | 0.550 | 4e-99 | |
| Q7V4F6 | 339 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.820 | 0.970 | 0.531 | 4e-97 | |
| Q114K0 | 329 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.790 | 0.963 | 0.518 | 3e-96 | |
| Q5N5X5 | 335 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.807 | 0.967 | 0.537 | 5e-96 | |
| Q31N84 | 335 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.807 | 0.967 | 0.537 | 5e-96 |
| >sp|P49243|FABH_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic OS=Arabidopsis thaliana GN=At1g62640 PE=2 SV=2 | Back alignment and function desciption |
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Score = 606 bits (1562), Expect = e-172, Method: Compositional matrix adjust.
Identities = 303/404 (75%), Positives = 341/404 (84%), Gaps = 5/404 (1%)
Query: 1 MASASGLFT-PSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESR 59
MA+ASG FT PS+P+LR R+ SGFC S +RVLCSS ++ +K SSS S+
Sbjct: 1 MANASGFFTHPSIPNLRSRIHVPVRVSGSGFCVSNRFSKRVLCSS-VSSVDKDASSSPSQ 59
Query: 60 A--PRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLT 117
PRL+ GCKL+GCGSAVP+L ISNDDLAKIVDT+DEWI+ RTGIRNRRV+SGK+SL
Sbjct: 60 YQRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRNRRVVSGKDSLV 119
Query: 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAAC 177
GLAVEAA++AL+MAEV PED+DLVLMCTSTP+DLFG A QI KALGC NPLAYDITAAC
Sbjct: 120 GLAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLAYDITAAC 179
Query: 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
SGF+LGLVSAACHIRGGGF+NVLVIG D+LSRF DWTDRG+CILFGDAAGAV+VQACD E
Sbjct: 180 SGFVLGLVSAACHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVVVQACDIE 239
Query: 238 DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLA-FPPQHYSYSSIYMNGKEVF 296
DDGL SFDVHSDG+G RHLNA +K +Q + SNGSV FPP+ SYS I MNGKEVF
Sbjct: 240 DDGLFSFDVHSDGDGRRHLNASVKESQNDGESSSNGSVFGDFPPKQSSYSCIQMNGKEVF 299
Query: 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYG 356
RFAV+ VPQ+IESAL+KAGL S+IDWLLLHQANQRIID+VA RL P ERVISNLANYG
Sbjct: 300 RFAVKCVPQSIESALQKAGLPASAIDWLLLHQANQRIIDSVATRLHFPPERVISNLANYG 359
Query: 357 NTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
NTSAASIPLALDEAVRSGKVKPGHTIA +GFGAGLTWGSAI+RW
Sbjct: 360 NTSAASIPLALDEAVRSGKVKPGHTIATSGFGAGLTWGSAIMRW 403
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. KAS III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 8EC: 0 |
| >sp|P49244|FABH1_CUPWR 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic OS=Cuphea wrightii GN=KAS3A PE=2 SV=2 | Back alignment and function description |
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Score = 603 bits (1555), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/401 (73%), Positives = 339/401 (84%), Gaps = 1/401 (0%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESRA 60
MA+ASG SVP+LRR QP S S F+RV C S + GS++ S +SR+
Sbjct: 1 MANASGFLGSSVPALRRATQPQHSISSSRGSSSDFVFKRVFCCSAVQGSDRQ-SLGDSRS 59
Query: 61 PRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120
PRL++RGCKL+G GSA+P+LQISNDDLAKIVDT+DEWISVRTGIRNRRVL+GK+SLT LA
Sbjct: 60 PRLVSRGCKLIGSGSAIPSLQISNDDLAKIVDTNDEWISVRTGIRNRRVLTGKDSLTNLA 119
Query: 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGF 180
EAA +AL+MA+++ +DVD+VLMCTSTPEDLFG A QI KALGCK NPL+YDITAACSGF
Sbjct: 120 SEAARKALEMAQIDADDVDMVLMCTSTPEDLFGSAPQISKALGCKKNPLSYDITAACSGF 179
Query: 181 LLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDG 240
+LGLVSAACHIRGGGF NVLVIG D+LSR+ DWTDRG+CILFGDAAGAV+VQ+CD+E+DG
Sbjct: 180 VLGLVSAACHIRGGGFNNVLVIGADSLSRYVDWTDRGTCILFGDAAGAVVVQSCDAEEDG 239
Query: 241 LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300
L +FD+HSDG+G RHL A IK ++ + ALGSNGS+ FPP+ SYS I MNGKEVFRFA
Sbjct: 240 LFAFDLHSDGDGQRHLKAAIKEDEVDKALGSNGSIRDFPPRRSSYSCIQMNGKEVFRFAC 299
Query: 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSA 360
R VPQ+IESAL KAGL S+IDWLLLHQANQRIIDAVA RL+VP ER+ISNLANYGNTSA
Sbjct: 300 RCVPQSIESALGKAGLNGSNIDWLLLHQANQRIIDAVATRLEVPQERIISNLANYGNTSA 359
Query: 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
ASIPLALDEAVRSG VKPGH IA AGFGAGLTWGSAI+RWG
Sbjct: 360 ASIPLALDEAVRSGNVKPGHVIATAGFGAGLTWGSAIIRWG 400
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. KAS III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Cuphea wrightii (taxid: 35942) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 0 |
| >sp|Q07510|FABH_SPIOL 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/406 (72%), Positives = 341/406 (83%), Gaps = 6/406 (1%)
Query: 1 MASASGLFTPSVPS-LRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSS---- 55
MA++ G F+PSVPS L ++ PS SGFC G +RV CSS I SEK ++
Sbjct: 1 MATSYGFFSPSVPSSLNNKISPSLGINGSGFCSHLGISKRVFCSS-IEASEKHAAAGVSS 59
Query: 56 SESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKES 115
SESR RL+NRGCKLVGCGSAVP LQISNDDL+K V+TSDEWI+ RTGIR R VLSGK+S
Sbjct: 60 SESRVSRLVNRGCKLVGCGSAVPKLQISNDDLSKFVETSDEWIATRTGIRQRHVLSGKDS 119
Query: 116 LTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITA 175
L LA EAA ALQMA VNP+D+DL+LMCTSTPEDLFG A Q+ +ALGC PL+YDITA
Sbjct: 120 LVDLAAEAARNALQMANVNPDDIDLILMCTSTPEDLFGSAPQVQRALGCSRTPLSYDITA 179
Query: 176 ACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACD 235
ACSGF+LGLVSAACH+RGGGF+NVLVIG DALSRF DWTDRG+CILFGDAAGAV+VQACD
Sbjct: 180 ACSGFMLGLVSAACHVRGGGFKNVLVIGADALSRFVDWTDRGTCILFGDAAGAVVVQACD 239
Query: 236 SEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEV 295
SE+DG+ +FD+HSDG GGRHLNA + ++T+ A+G+NG+V FPP+ SYS I MNGKEV
Sbjct: 240 SEEDGMFAFDLHSDGGGGRHLNASLLNDETDAAIGNNGAVTGFPPKRPSYSCINMNGKEV 299
Query: 296 FRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANY 355
FRFAVR VPQ+IE+AL+KAGLT S+IDWLLLHQANQRIIDAVA RL+VP ERV+SNLANY
Sbjct: 300 FRFAVRCVPQSIEAALQKAGLTSSNIDWLLLHQANQRIIDAVATRLEVPSERVLSNLANY 359
Query: 356 GNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
GNTSAASIPLALDEAVRSGKVKPG+ IA +GFGAGLTWGS+I+RWG
Sbjct: 360 GNTSAASIPLALDEAVRSGKVKPGNIIATSGFGAGLTWGSSIIRWG 405
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. KAS III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 0 |
| >sp|P49245|FABH2_CUPWR 3-oxoacyl-[acyl-carrier-protein] synthase 3 B, chloroplastic OS=Cuphea wrightii GN=KAS3B PE=2 SV=1 | Back alignment and function description |
|---|
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/404 (72%), Positives = 333/404 (82%), Gaps = 5/404 (1%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSS---SE 57
MA+A G SVP+++R Q + SGFC + +RV C S + G++K S +E
Sbjct: 1 MANAYGFVGHSVPTMKRAAQFQ--QMGSGFCSADSISKRVFCCSVVQGADKPASGDSRTE 58
Query: 58 SRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLT 117
R PRL++RGCKLVG GSA+P LQ+SNDDL+KIVDT+DEWISVRTGIRNRRVL+GKESLT
Sbjct: 59 YRTPRLVSRGCKLVGSGSAMPALQVSNDDLSKIVDTNDEWISVRTGIRNRRVLTGKESLT 118
Query: 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAAC 177
LA AA +AL+MA+V+ DVD+VLMCTSTPEDLFG A QI KALGCK NPLAYDITAAC
Sbjct: 119 NLATVAARKALEMAQVDANDVDMVLMCTSTPEDLFGSAPQIQKALGCKKNPLAYDITAAC 178
Query: 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
SGF+LGLVSAACHIRGGGF N+LVIG D+LSR+ DWTDRG+CILFGDAAGAVLVQ+CD+E
Sbjct: 179 SGFVLGLVSAACHIRGGGFNNILVIGADSLSRYVDWTDRGTCILFGDAAGAVLVQSCDAE 238
Query: 238 DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFR 297
+DGL +FD+HSDG+G RHL A I N + A+GSNGSV FPP+ SYS I MNGKEVFR
Sbjct: 239 EDGLFAFDLHSDGDGQRHLKAAITENGIDHAVGSNGSVSDFPPRSSSYSCIQMNGKEVFR 298
Query: 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGN 357
FA R VPQ+IESAL KAGL S+IDWLLLHQANQRIIDAVA RL+VP ERVISNLANYGN
Sbjct: 299 FACRCVPQSIESALGKAGLNGSNIDWLLLHQANQRIIDAVATRLEVPQERVISNLANYGN 358
Query: 358 TSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
TSAASIPLALDEAVR GKVK GH IA AGFGAGLTWGSAI+RWG
Sbjct: 359 TSAASIPLALDEAVRGGKVKAGHLIATAGFGAGLTWGSAIVRWG 402
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. KAS III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Cuphea wrightii (taxid: 35942) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 0 |
| >sp|B0JXE2|FABH_MICAN 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Microcystis aeruginosa (strain NIES-843) GN=fabH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/332 (56%), Positives = 241/332 (72%), Gaps = 9/332 (2%)
Query: 70 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQ 129
+ GCGSA P +SN++L++IV+TSDEWI RTGI R + SL+ LA +AA +AL+
Sbjct: 10 ITGCGSATPAQFLSNEELSQIVETSDEWIKSRTGIGKRHLADRSVSLSQLAAQAAIKALE 69
Query: 130 MAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189
MA+V+P D+DL+L+ TSTP+DLFG A Q+ +G N +A+D+TAACSGFL+GLV+A
Sbjct: 70 MAQVSPRDIDLILLATSTPDDLFGSAAQVQSQIGA-NRAIAFDLTAACSGFLVGLVTATQ 128
Query: 190 HIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSD 249
IR G +RNVLVIG D LSR+ DW DR +C+LFGD AGAV+ QA D++D+ ++ F++HSD
Sbjct: 129 FIRTGTYRNVLVIGADVLSRWVDWNDRATCVLFGDGAGAVVCQANDTKDN-ILGFELHSD 187
Query: 250 GEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIES 309
G LN +G + G Q +Y + MNG+EV+RFAV VP+ IE
Sbjct: 188 GSQNGSLNLAYEGEELPLKQG-------IRVQKGTYKPLRMNGREVYRFAVAKVPEVIEK 240
Query: 310 ALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDE 369
AL +A LT S IDWL+LHQANQRI+DAV+ RL +P E+VISNL+ YGNTSAASIPLALDE
Sbjct: 241 ALYRANLTTSDIDWLVLHQANQRIMDAVSERLKLPPEKVISNLSEYGNTSAASIPLALDE 300
Query: 370 AVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
AVRSGKVK G IA++GFGAGLTWG I RWG
Sbjct: 301 AVRSGKVKKGDIIASSGFGAGLTWGGIIFRWG 332
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids. Microcystis aeruginosa (strain NIES-843) (taxid: 449447) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 0 |
| >sp|B0CE67|FABH_ACAM1 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Acaryochloris marina (strain MBIC 11017) GN=fabH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 362 bits (928), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 184/334 (55%), Positives = 237/334 (70%), Gaps = 10/334 (2%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
G + GCGSA P + N L++IVDTSDEWI+ RTGIR+R + ++L L AA
Sbjct: 7 GLAVTGCGSAAPETSLDNHGLSQIVDTSDEWIASRTGIRSRHLAGPDDTLAKLGAIAAQN 66
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
AL+MA+V D+DL+L+ TSTP+DLFG A QI A+G K+ +A+D+TAACSGF+ G+++
Sbjct: 67 ALEMAQVEATDLDLILLATSTPDDLFGSACQIQAAIGAKH-AVAFDLTAACSGFVFGMIT 125
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDV 246
AA IR G +RNVL++G D LSR+ DWTDR SC+LFGD AGAV++QA D+ D L+ F +
Sbjct: 126 AAQFIRTGVYRNVLLVGADVLSRWVDWTDRRSCVLFGDGAGAVVLQANDT--DRLLGFAL 183
Query: 247 HSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306
HSDG L+ C+ +A G + +Y I MNGKEV+RFAV VP+
Sbjct: 184 HSDG----CLHDCLNVQYQGEARPLTGEI---NVSQGTYQPISMNGKEVYRFAVNRVPEV 236
Query: 307 IESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLA 366
+E AL ++ L IDWLLLHQANQRI+DAVA RL VP E+VISN+ANYGNTSAA+IPLA
Sbjct: 237 VEKALFQSDLKTDDIDWLLLHQANQRILDAVAKRLKVPAEKVISNIANYGNTSAATIPLA 296
Query: 367 LDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
LD VR G +KPG TIAA+GFGAGL+WG+AI +W
Sbjct: 297 LDATVRKGHIKPGDTIAASGFGAGLSWGAAIFQW 330
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids. Acaryochloris marina (strain MBIC 11017) (taxid: 329726) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 0 |
| >sp|Q7V4F6|FABH_PROMM 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=fabH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (910), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/337 (53%), Positives = 232/337 (68%), Gaps = 8/337 (2%)
Query: 64 INRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEA 123
I G LVGCGSA P+ +ISND L + VDTSD WI RTGI RRV+ E+LTGL+ +A
Sbjct: 7 IGSGVALVGCGSATPSQRISNDQLGQRVDTSDAWIRSRTGISARRVIGPDETLTGLSHQA 66
Query: 124 ASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLG 183
A+ AL MA PE VDL+++ TSTP+DLFG A Q+ LG + +A+D+TAACSGFL
Sbjct: 67 AANALTMAGWEPESVDLIILATSTPDDLFGSAPQLQAILGARQ-AVAFDLTAACSGFLFA 125
Query: 184 LVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLIS 243
L++AA +R G R LVIG D LSR+ DW DR SC+LFGD AGAV ++A + +GL+
Sbjct: 126 LITAAQFLRTGAMRRALVIGADQLSRWVDWDDRRSCVLFGDGAGAVALEATSAAQNGLLG 185
Query: 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303
F + SDG G LN N + G++ F P I MNG+EV++FAVR V
Sbjct: 186 FQLKSDGSRGDCLNLPQVQNHLSLVAGNSHQQGGFKP-------IQMNGQEVYKFAVREV 238
Query: 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASI 363
P +++ L+ S+DWLLLHQANQRI+DAVANR +P +V+SNLA YGNTSAA+I
Sbjct: 239 PAILQTLLKATNTAPESLDWLLLHQANQRILDAVANRFAIPQAKVLSNLAEYGNTSAATI 298
Query: 364 PLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
PL LDEAV+ G++KPG IA++GFGAGL+WG+A++RW
Sbjct: 299 PLMLDEAVQDGRIKPGQLIASSGFGAGLSWGAALIRW 335
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids. Prochlorococcus marinus (strain MIT 9313) (taxid: 74547) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 0 |
| >sp|Q114K0|FABH_TRIEI 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Trichodesmium erythraeum (strain IMS101) GN=fabH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 352 bits (902), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 235/349 (67%), Gaps = 32/349 (9%)
Query: 63 LINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVE 122
+ N G ++G GSA+P + N L++IV+TSDEWI RTGI R+++ ESL LA +
Sbjct: 1 MTNIGVSIIGSGSAIPKTSLDNQQLSQIVETSDEWIISRTGINKRQLVDTTESLCSLATQ 60
Query: 123 AASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLL 182
A+ AL A + P+D+DL+++ TSTP+DLFG A +I LG + +A+DIT ACSGFL
Sbjct: 61 ASLAALNQANITPKDIDLIILATSTPDDLFGTACKIQWELGAQK-AVAFDITVACSGFLF 119
Query: 183 GLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLI 242
LV+ A IR G ++NVL+IG D LSR+ DW DR +C+LFGD AGAVL+QA SE D L+
Sbjct: 120 ALVTGAQFIRNGVYQNVLLIGADILSRWVDWEDRRTCVLFGDGAGAVLLQA--SESDRLL 177
Query: 243 SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHY-----------SYSSIYMN 291
F++ SDG N+C+ L++ PQ +Y I MN
Sbjct: 178 GFELGSDGSQ----NSCLS--------------LSYQPQEKRIIEGVTVSQGTYQPIAMN 219
Query: 292 GKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN 351
GKEV+RF V+ VP+ IE AL KA + + +DWLLLHQANQRI+DAVANRL++P E+VISN
Sbjct: 220 GKEVYRFVVQKVPEAIEKALLKANIDIDKLDWLLLHQANQRILDAVANRLNIPPEKVISN 279
Query: 352 LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
L NYGNTSAASIPLALDE VR G VK G IAA+GFGAGL+WG+ I +W
Sbjct: 280 LRNYGNTSAASIPLALDEVVREGLVKSGDIIAASGFGAGLSWGAVIFQW 328
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids. Trichodesmium erythraeum (strain IMS101) (taxid: 203124) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q5N5X5|FABH_SYNP6 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=fabH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 351 bits (901), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/337 (53%), Positives = 237/337 (70%), Gaps = 13/337 (3%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGK-ESLTGLAVEAAS 125
G + G GSAVP+ +SND L+++V+TSDEWI RTGI RRV + ESL+ LA A
Sbjct: 7 GVAITGSGSAVPSTTLSNDQLSQLVETSDEWIRSRTGIGQRRVAQPQIESLSSLAAAAGQ 66
Query: 126 RALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLV 185
AL+ A + VDL+L+ TSTP+DLFG A Q+ ALG +A+D+TAACSGFL LV
Sbjct: 67 SALEAAGLEATSVDLILLATSTPDDLFGSACQVQAALGA-TQAVAFDLTAACSGFLFALV 125
Query: 186 SAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFD 245
+ A IR G +R VLVIG D LSR+TDW+DR +C+LFGD AGAV++QA SE D L+ F+
Sbjct: 126 TGAQFIRSGAYRTVLVIGADVLSRWTDWSDRRTCVLFGDGAGAVVLQA--SEIDQLLGFE 183
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLA-FPPQHYSYSSIYMNGKEVFRFAVRVVP 304
+ SDG LN C+ D N S+L+ +Y + MNG+EV+RFAV+ VP
Sbjct: 184 MRSDG----SLNGCLTLAYQAD----NQSLLSDIEIAQGTYQPVAMNGQEVYRFAVKRVP 235
Query: 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIP 364
+ +E L AG+ +DWLLLHQANQRI+DAVA+RLD+ +RV+SNL NYGNTS+A+IP
Sbjct: 236 EILEKTLFHAGIDRQEVDWLLLHQANQRILDAVADRLDISRDRVLSNLVNYGNTSSATIP 295
Query: 365 LALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
L LDEAV++GK++ G IAA+GFGAGL+WG+A+ RWG
Sbjct: 296 LVLDEAVKAGKIQSGDLIAASGFGAGLSWGAALFRWG 332
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids. Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q31N84|FABH_SYNE7 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Synechococcus elongatus (strain PCC 7942) GN=fabH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 351 bits (901), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/337 (53%), Positives = 237/337 (70%), Gaps = 13/337 (3%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGK-ESLTGLAVEAAS 125
G + G GSAVP+ +SND L+++V+TSDEWI RTGI RRV + ESL+ LA A
Sbjct: 7 GVAITGSGSAVPSTTLSNDQLSQLVETSDEWIRSRTGIGQRRVAQPQIESLSSLAAAAGQ 66
Query: 126 RALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLV 185
AL+ A + VDL+L+ TSTP+DLFG A Q+ ALG +A+D+TAACSGFL LV
Sbjct: 67 SALEAAGLEATSVDLILLATSTPDDLFGSACQVQAALGA-TQAVAFDLTAACSGFLFALV 125
Query: 186 SAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFD 245
+ A IR G +R VLVIG D LSR+TDW+DR +C+LFGD AGAV++QA SE D L+ F+
Sbjct: 126 TGAQFIRSGAYRTVLVIGADVLSRWTDWSDRRTCVLFGDGAGAVVLQA--SEIDQLLGFE 183
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLA-FPPQHYSYSSIYMNGKEVFRFAVRVVP 304
+ SDG LN C+ D N S+L+ +Y + MNG+EV+RFAV+ VP
Sbjct: 184 MRSDG----SLNGCLTLAYQAD----NQSLLSDIEIAQGTYQPVAMNGQEVYRFAVKRVP 235
Query: 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIP 364
+ +E L AG+ +DWLLLHQANQRI+DAVA+RLD+ +RV+SNL NYGNTS+A+IP
Sbjct: 236 EILEKTLFHAGIDRQEVDWLLLHQANQRILDAVADRLDISRDRVLSNLVNYGNTSSATIP 295
Query: 365 LALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
L LDEAV++GK++ G IAA+GFGAGL+WG+A+ RWG
Sbjct: 296 LVLDEAVKAGKIQSGDLIAASGFGAGLSWGAALFRWG 332
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids. Synechococcus elongatus (strain PCC 7942) (taxid: 1140) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 401 | ||||||
| 359474343 | 400 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 0.997 | 1.0 | 0.802 | 0.0 | |
| 255577831 | 400 | Ketoacyl-ACP Synthase III (KAS III) [Ric | 0.997 | 1.0 | 0.798 | 0.0 | |
| 116248671 | 400 | beta-ketoacyl-ACP synthase III [Jatropha | 0.995 | 0.997 | 0.810 | 0.0 | |
| 300507131 | 401 | KASIII [Gossypium hirsutum] | 1.0 | 1.0 | 0.780 | 0.0 | |
| 2921213 | 401 | beta-ketoacyl-ACP synthase IIIA [Perilla | 0.997 | 0.997 | 0.788 | 0.0 | |
| 2921215 | 400 | beta-ketoacyl-ACP synthase IIIB [Perilla | 0.997 | 1.0 | 0.780 | 1e-180 | |
| 388458923 | 405 | beta-ketoacyl-acp synthase [Camellia ole | 1.0 | 0.990 | 0.762 | 1e-176 | |
| 351721843 | 397 | beta-ketoacyl-acyl carrier protein synth | 0.980 | 0.989 | 0.750 | 1e-173 | |
| 356532179 | 397 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 0.980 | 0.989 | 0.748 | 1e-173 | |
| 193290706 | 431 | putative 3-oxoacyl-(acyl-carrier-protein | 0.982 | 0.914 | 0.741 | 1e-173 |
| >gi|359474343|ref|XP_003631438.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic-like [Vitis vinifera] gi|297741159|emb|CBI31890.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/401 (80%), Positives = 355/401 (88%), Gaps = 1/401 (0%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESRA 60
MA+ SG F+PSVPSLRRRVQPS YRSGFCF +RV CSSTI G+EK +S S+SR
Sbjct: 1 MANVSGFFSPSVPSLRRRVQPSIGLYRSGFCFPAKISKRVFCSSTIEGAEK-LSPSQSRV 59
Query: 61 PRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120
PR++++GCKLVGCGSAVP+LQISNDDLAKIV+TSDEWISVRTGIRNRRVLSGK+SLT LA
Sbjct: 60 PRIVSKGCKLVGCGSAVPSLQISNDDLAKIVETSDEWISVRTGIRNRRVLSGKDSLTALA 119
Query: 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGF 180
VEAA RAL+MA+V+P++VDLVLMCTSTPEDLFG A QI KALGCK NPLAYDITAACSGF
Sbjct: 120 VEAAKRALEMAQVDPDEVDLVLMCTSTPEDLFGSAPQIQKALGCKKNPLAYDITAACSGF 179
Query: 181 LLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDG 240
+LGLVSAACHIRGGGF NVLVIG DALSR+ DWTDRG+CILFGDAAGAVLVQACDSE DG
Sbjct: 180 VLGLVSAACHIRGGGFHNVLVIGADALSRYVDWTDRGTCILFGDAAGAVLVQACDSEQDG 239
Query: 241 LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300
L +FD+HSDG+G RHLNA +K N+T+ LGSNGSVL P SYS I MNGKEVFRFAV
Sbjct: 240 LFAFDLHSDGDGQRHLNASMKNNETDSTLGSNGSVLDVPQARSSYSCIQMNGKEVFRFAV 299
Query: 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSA 360
R VPQ+IESALEKAGL+ S+IDWLLLHQANQRIIDAVA RL+VP ERVISNLA YGNTSA
Sbjct: 300 RCVPQSIESALEKAGLSGSNIDWLLLHQANQRIIDAVATRLEVPPERVISNLAQYGNTSA 359
Query: 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
ASIPLALDEAVRSGKV+ GHTIA AGFGAGLTWGSAI+RWG
Sbjct: 360 ASIPLALDEAVRSGKVQSGHTIATAGFGAGLTWGSAIVRWG 400
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|255577831|ref|XP_002529789.1| Ketoacyl-ACP Synthase III (KAS III) [Ricinus communis] gi|148791251|gb|ABR12417.1| plastid 3-keto-acyl-ACP synthase III [Ricinus communis] gi|223530733|gb|EEF32603.1| Ketoacyl-ACP Synthase III (KAS III) [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/401 (79%), Positives = 354/401 (88%), Gaps = 1/401 (0%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESRA 60
MA+ASG F+PSVPS+ RR++P S F FS+G +RV CSS+I GSEK +S+S+SR
Sbjct: 1 MANASGFFSPSVPSVSRRIKPLIGTTGSAFSFSEGISKRVFCSSSIEGSEK-LSTSQSRI 59
Query: 61 PRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120
PR+I++GCKLVG GSA PTLQISNDDLAK+VDTSDEWISVRTGIRNRRVL+GKESL LA
Sbjct: 60 PRIISKGCKLVGSGSAAPTLQISNDDLAKMVDTSDEWISVRTGIRNRRVLTGKESLISLA 119
Query: 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGF 180
EAA +ALQMAEV+P+DVDLVLMCTSTPEDLFG A QI K LGCK NPLAYDITAACSGF
Sbjct: 120 TEAARKALQMAEVDPDDVDLVLMCTSTPEDLFGSAPQIQKGLGCKKNPLAYDITAACSGF 179
Query: 181 LLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDG 240
+LGLVSAACHIRGGGF+NVLVIG DALSR DWTDRG+CILFGDAAGAVLVQACD+EDDG
Sbjct: 180 MLGLVSAACHIRGGGFQNVLVIGADALSRHVDWTDRGTCILFGDAAGAVLVQACDTEDDG 239
Query: 241 LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300
L SFD+HSDG+G RHLNA IK N+ + +GSNGSV FPP+H SYS I MNGKEVFRFAV
Sbjct: 240 LFSFDLHSDGDGRRHLNAGIKENEVDHTVGSNGSVSDFPPRHASYSCIQMNGKEVFRFAV 299
Query: 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSA 360
R VPQ+IESAL KAGLT SSIDWLLLHQANQRI+DAVA RL+VP ERV+SNLANYGNTSA
Sbjct: 300 RCVPQSIESALSKAGLTGSSIDWLLLHQANQRILDAVATRLEVPPERVLSNLANYGNTSA 359
Query: 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSA+LRWG
Sbjct: 360 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAVLRWG 400
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116248671|gb|ABJ90470.1| beta-ketoacyl-ACP synthase III [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/402 (81%), Positives = 355/402 (88%), Gaps = 3/402 (0%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTF-RRVLCSSTIAGSEKSVSSSESR 59
MA+ASG F+PSVPSLRR+V+PS SGF FS G RRV CSS+I G+EK +S+S+S+
Sbjct: 1 MANASGFFSPSVPSLRRKVKPSIEMTGSGF-FSCGRISRRVFCSSSIEGAEK-LSTSQSQ 58
Query: 60 APRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGL 119
PRLI+ GCKLVG GSAVP LQISNDDLAK+VDTSDEWISVRTGIRNRRVL+GK+SL L
Sbjct: 59 IPRLISNGCKLVGSGSAVPALQISNDDLAKVVDTSDEWISVRTGIRNRRVLTGKDSLISL 118
Query: 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSG 179
A EAA +ALQMAEV P+DVDLVLMCTSTPEDLFG A QIPKALGCK NPLAYDITAACSG
Sbjct: 119 ATEAARKALQMAEVEPDDVDLVLMCTSTPEDLFGSAPQIPKALGCKTNPLAYDITAACSG 178
Query: 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDD 239
F+LGLVSAACHIRGGGFRNVLVIG D LSR+ DWTDRG+CILFGDAAGAVLVQACDSEDD
Sbjct: 179 FVLGLVSAACHIRGGGFRNVLVIGADGLSRYVDWTDRGTCILFGDAAGAVLVQACDSEDD 238
Query: 240 GLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFA 299
GL SFD+HSDG+G RHLNA I ++ + ALGSNGSVL FPP+ SYS I MNGKEVFRFA
Sbjct: 239 GLFSFDLHSDGDGQRHLNAGITESEVDHALGSNGSVLGFPPRRASYSCIQMNGKEVFRFA 298
Query: 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTS 359
VR VPQ+IESALEKAGLT SSIDWLLLHQANQRI+DAVA RL+VP ERVISNLANYGNTS
Sbjct: 299 VRCVPQSIESALEKAGLTGSSIDWLLLHQANQRILDAVATRLEVPPERVISNLANYGNTS 358
Query: 360 AASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
AASIPLALDEAVRSGKVK GHTIA AGFGAGLTWGSAI+RWG
Sbjct: 359 AASIPLALDEAVRSGKVKAGHTIATAGFGAGLTWGSAIIRWG 400
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|300507131|gb|ADK23941.1| KASIII [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/401 (78%), Positives = 352/401 (87%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESRA 60
MA+ASG FTPSVP LR ++QPS RSGFCFS G RRV+CSS I G+EK VS S SR
Sbjct: 1 MANASGFFTPSVPRLRSKIQPSIGVSRSGFCFSAGISRRVVCSSAIEGAEKHVSPSVSRM 60
Query: 61 PRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120
P+L+++GCKLVGCGSAVP+L +SNDDL+KIVDTSDEWISVRTGIRNRRV+SGKESL LA
Sbjct: 61 PKLVSKGCKLVGCGSAVPSLSVSNDDLSKIVDTSDEWISVRTGIRNRRVMSGKESLKELA 120
Query: 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGF 180
VEAA +AL+MA+ +P D+DL+LMCTSTPED+FG A QI + LGC+N+PLAYDITAACSGF
Sbjct: 121 VEAARKALEMADFDPNDLDLILMCTSTPEDIFGSAPQIQRELGCRNSPLAYDITAACSGF 180
Query: 181 LLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDG 240
+LGL+SAA IRGGGFRNVLVIG D LSRF DWTDRG+CILFGDAAGAVLVQACD+E+DG
Sbjct: 181 VLGLISAASPIRGGGFRNVLVIGADGLSRFVDWTDRGTCILFGDAAGAVLVQACDAEEDG 240
Query: 241 LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300
L+SFD+HSDGEGGRHL A I N+T++ LGSNGS L FPP+ SYS I MNGKEVFRFAV
Sbjct: 241 LLSFDLHSDGEGGRHLGAPINDNETDELLGSNGSALDFPPKKSSYSCIQMNGKEVFRFAV 300
Query: 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSA 360
R VPQ+IESALEKAGL ++DWLLLHQANQRIIDAVA RLD P E+VISNLANYGNTSA
Sbjct: 301 RCVPQSIESALEKAGLVSGNVDWLLLHQANQRIIDAVATRLDFPQEKVISNLANYGNTSA 360
Query: 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAI+RWG
Sbjct: 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAIIRWG 401
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2921213|gb|AAC04693.1| beta-ketoacyl-ACP synthase IIIA [Perilla frutescens] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/402 (78%), Positives = 358/402 (89%), Gaps = 2/402 (0%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESRA 60
MA+ASGLFTP+ PS+RRR P YRSGF FS+G RR++CSST G+EK +S SESRA
Sbjct: 1 MANASGLFTPAAPSVRRRCSPCIGIYRSGFWFSEGVSRRIVCSSTTQGAEK-LSPSESRA 59
Query: 61 PRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120
RL++RGCKLVGCGSAVP+LQISNDDL+KIVDT+DEWISVRTGIRNRR+LSGK+SLT LA
Sbjct: 60 SRLVSRGCKLVGCGSAVPSLQISNDDLSKIVDTNDEWISVRTGIRNRRILSGKDSLTDLA 119
Query: 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGF 180
VEAA +AL+MAEV+P++VDLVLMCTSTPEDLFG A QI KALGCKNNPLAYDITAACSGF
Sbjct: 120 VEAARKALEMAEVDPDEVDLVLMCTSTPEDLFGSAPQIQKALGCKNNPLAYDITAACSGF 179
Query: 181 LLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDG 240
+LGLVSAAC+I+GGGF+NVLVIG DALSR+ DWTDRGSCILFGDAAGAVLVQAC+S++DG
Sbjct: 180 VLGLVSAACYIKGGGFKNVLVIGADALSRYVDWTDRGSCILFGDAAGAVLVQACESDEDG 239
Query: 241 LISFDVHSDGEGGRHLNACIKGNQT-NDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFA 299
L +FD+HSDGEG RHLNA +K + N +G+NGS+L P+ SYS I MNGKEVFRFA
Sbjct: 240 LFAFDMHSDGEGQRHLNATMKEKEKENHEVGTNGSLLGLLPKGSSYSCIQMNGKEVFRFA 299
Query: 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTS 359
VRVVPQ+IE AL KAGLT SSIDWLLLHQANQRIIDAVA RL++P ERVISNLANYGNTS
Sbjct: 300 VRVVPQSIELALAKAGLTGSSIDWLLLHQANQRIIDAVATRLELPPERVISNLANYGNTS 359
Query: 360 AASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
AASIPLALDEAVRSGKV+ GHTIAAAGFGAGLTWGSAI+RWG
Sbjct: 360 AASIPLALDEAVRSGKVQAGHTIAAAGFGAGLTWGSAIVRWG 401
|
Source: Perilla frutescens Species: Perilla frutescens Genus: Perilla Family: Lamiaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2921215|gb|AAC04694.1| beta-ketoacyl-ACP synthase IIIB [Perilla frutescens] | Back alignment and taxonomy information |
|---|
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/401 (78%), Positives = 347/401 (86%), Gaps = 1/401 (0%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESRA 60
MA+ SGL P+VPSLRRR PS+ YRSGF F G RR +CSS G+EK +S +ES+
Sbjct: 1 MANVSGLVVPTVPSLRRRFSPSSDIYRSGFWFYDGVSRRTVCSSAAQGAEK-LSPAESKV 59
Query: 61 PRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120
PRL ++GCKLVGCGSAVP++QISNDDL+KI+DTSDEWISVRTGIRNRR+LS K+SLT LA
Sbjct: 60 PRLASKGCKLVGCGSAVPSIQISNDDLSKIIDTSDEWISVRTGIRNRRILSRKDSLTALA 119
Query: 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGF 180
EAA +ALQMAEV+P+DVDLVL+CTSTPEDLFG A QIPKALGCKNNPLAYDITAACSGF
Sbjct: 120 TEAAQKALQMAEVDPDDVDLVLLCTSTPEDLFGSAPQIPKALGCKNNPLAYDITAACSGF 179
Query: 181 LLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDG 240
LLGLVSAAC+IRGGGF NVLVIG DALSR+ DW DRGSCILFGDAAGAVLVQ+CDSE+DG
Sbjct: 180 LLGLVSAACYIRGGGFNNVLVIGADALSRYVDWNDRGSCILFGDAAGAVLVQSCDSEEDG 239
Query: 241 LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300
L SFD+HSDG G RHLNA +K N+ + LGSNGS L P+ SYS I MNGKEVFRFAV
Sbjct: 240 LFSFDMHSDGGGQRHLNASMKENKIDHELGSNGSFLGLLPKGSSYSCIQMNGKEVFRFAV 299
Query: 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSA 360
RVVP +IE ALEKAGL S+IDWLLLHQANQRIIDAVA RL+VP ERVISNLANYGNTSA
Sbjct: 300 RVVPHSIELALEKAGLAASNIDWLLLHQANQRIIDAVATRLEVPPERVISNLANYGNTSA 359
Query: 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
ASIPLALDEAVRSGKV+ GHTIA AGFGAGLTWGSAI+RWG
Sbjct: 360 ASIPLALDEAVRSGKVQAGHTIATAGFGAGLTWGSAIVRWG 400
|
Source: Perilla frutescens Species: Perilla frutescens Genus: Perilla Family: Lamiaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388458923|gb|AFK31316.1| beta-ketoacyl-acp synthase [Camellia oleifera] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/405 (76%), Positives = 347/405 (85%), Gaps = 4/405 (0%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEK---SVSSSE 57
MA SG +P+VPSLR+ + PS RS + +G + V CSSTI GSEK VS SE
Sbjct: 1 MAKTSGFLSPTVPSLRKTIPPSIGMCRSVYFSGEGISKGVFCSSTIEGSEKLGSGVSLSE 60
Query: 58 SRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLT 117
SR RL+++GCKLVGCGSAVP+LQ+SNDDLAK+VDTSDEWISVRTGIRNRR+L+GKESLT
Sbjct: 61 SRVARLVSKGCKLVGCGSAVPSLQVSNDDLAKVVDTSDEWISVRTGIRNRRILTGKESLT 120
Query: 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAAC 177
LAVEAA +AL+MA+V+P+DVDLVL+CTSTPEDLFG A QI KALGCK NPLAYDITAAC
Sbjct: 121 ALAVEAAQKALEMAKVDPDDVDLVLLCTSTPEDLFGSAPQIQKALGCKGNPLAYDITAAC 180
Query: 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
SGFLLGLVSAAC+IRGGGF NVLVIG D LSR+ DWTDRG+CILFGDAAGAV+VQAC SE
Sbjct: 181 SGFLLGLVSAACYIRGGGFNNVLVIGADVLSRYVDWTDRGTCILFGDAAGAVVVQACSSE 240
Query: 238 DDGLISFDVHSDGEGGRHLNA-CIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVF 296
+DGL FD+HSDG+G RHLNA + N+T+ LGSNGSVL FPP+ SYS I MNGKEVF
Sbjct: 241 EDGLFGFDLHSDGDGQRHLNASTMNENETDPGLGSNGSVLGFPPKRSSYSCIQMNGKEVF 300
Query: 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYG 356
R AVR VPQ+IESALEKAGL+ SSIDWLLLHQAN+RIIDAVA RL+VP ERVISNLANYG
Sbjct: 301 RLAVRYVPQSIESALEKAGLSGSSIDWLLLHQANRRIIDAVATRLEVPPERVISNLANYG 360
Query: 357 NTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
NTSAASIPLALDEAVRSGKVK GH IAA+GFGAGLTWGSAI+RWG
Sbjct: 361 NTSAASIPLALDEAVRSGKVKSGHMIAASGFGAGLTWGSAIVRWG 405
|
Source: Camellia oleifera Species: Camellia oleifera Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351721843|ref|NP_001237735.1| beta-ketoacyl-acyl carrier protein synthase III [Glycine max] gi|7862174|gb|AAF70509.1| beta-ketoacyl-acyl carrier protein synthase III [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 304/405 (75%), Positives = 344/405 (84%), Gaps = 12/405 (2%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVS----SS 56
MA+ASG F+PSVP + RV+P T + FS +V+C I G+EK S SS
Sbjct: 1 MANASGFFSPSVPHFKVRVKPLT----TAIGFSA----KVVCVGNIEGAEKHASTVSPSS 52
Query: 57 ESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESL 116
+S PRL+++GCKLVGCGSAVP LQISNDDL+K+VDT+DEWISVRTGIR RRVLSGK++L
Sbjct: 53 QSPIPRLVSKGCKLVGCGSAVPALQISNDDLSKMVDTNDEWISVRTGIRRRRVLSGKDNL 112
Query: 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAA 176
TGLAVEAA +AL+MA+V+P+D+DL+LMCTSTPEDLFG A QI K LGCK NPL+YDITAA
Sbjct: 113 TGLAVEAARKALEMAKVDPDDLDLILMCTSTPEDLFGSAPQIQKQLGCKANPLSYDITAA 172
Query: 177 CSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDS 236
CSGF+LGL+SAACHIRGGGF NVLVIG DALSR+ DWTDRG+CILFGDAAGAVLVQAC+S
Sbjct: 173 CSGFVLGLISAACHIRGGGFNNVLVIGADALSRYVDWTDRGTCILFGDAAGAVLVQACNS 232
Query: 237 EDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVF 296
E+DGL FD+HSDG G RHLNA IK N++N+AL SNGSV FPP+ SYS I MNGKEVF
Sbjct: 233 EEDGLFGFDLHSDGSGQRHLNASIKENESNNALDSNGSVFGFPPKQSSYSCIQMNGKEVF 292
Query: 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYG 356
RFAVR VPQ+IESALEKAGL SSIDWLLLHQANQRIIDAVA RL++P ERVISNLANYG
Sbjct: 293 RFAVRCVPQSIESALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 352
Query: 357 NTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
NTSAASIPLALDEAVRSGKVK G TIA AGFGAGLTWGSAI+RWG
Sbjct: 353 NTSAASIPLALDEAVRSGKVKAGQTIATAGFGAGLTWGSAIIRWG 397
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532179|ref|XP_003534651.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase 3 B, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 303/405 (74%), Positives = 343/405 (84%), Gaps = 12/405 (2%)
Query: 1 MASASGLFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVS----SS 56
MA+ASG FTPSVP + RV+P + FS +V+C I G+EK S SS
Sbjct: 1 MANASGFFTPSVPHFKVRVKP----LNTAIGFSA----KVVCFGNIEGAEKHASTVSPSS 52
Query: 57 ESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESL 116
+S PRL+++GCKLVGCGSAVP LQISNDDL+K+VDT+DEWISVRTGIR RRVLSGK++L
Sbjct: 53 QSPIPRLVSKGCKLVGCGSAVPALQISNDDLSKMVDTNDEWISVRTGIRRRRVLSGKDNL 112
Query: 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAA 176
T LAVEAA +AL+MA+V+P+D+DL+LMCTSTPEDLFG A QI K LGCK NPL+YDITAA
Sbjct: 113 TSLAVEAARKALEMAKVDPDDLDLILMCTSTPEDLFGSAPQIQKQLGCKTNPLSYDITAA 172
Query: 177 CSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDS 236
CSGF+LGL+SAACHIRGGGF NVLVIG DALSR+ DWTDRG+CILFGDAAGAVLVQAC+S
Sbjct: 173 CSGFVLGLISAACHIRGGGFNNVLVIGADALSRYVDWTDRGTCILFGDAAGAVLVQACNS 232
Query: 237 EDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVF 296
E+DGL FD+HSDG G RHLNA IK N++N+AL SNGSV+ FPP+ SYS I MNGKEVF
Sbjct: 233 EEDGLFGFDLHSDGSGQRHLNASIKENESNNALDSNGSVVGFPPKQSSYSCIQMNGKEVF 292
Query: 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYG 356
RFAVR VPQ+IESAL+KAGL SSIDWLLLHQANQRIIDAVA RL++P ERVISNLANYG
Sbjct: 293 RFAVRCVPQSIESALQKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 352
Query: 357 NTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
NTSAASIPLALDEAVRSGKVK G TIA AGFGAGLTWGSAILRWG
Sbjct: 353 NTSAASIPLALDEAVRSGKVKAGQTIATAGFGAGLTWGSAILRWG 397
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|193290706|gb|ACF17661.1| putative 3-oxoacyl-(acyl-carrier-protein) synthase III [Capsicum annuum] | Back alignment and taxonomy information |
|---|
Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust.
Identities = 293/395 (74%), Positives = 342/395 (86%), Gaps = 1/395 (0%)
Query: 7 LFTPSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIAGSEKSVSSSESRAPRLINR 66
LFTP+ ++R+R PS Y+ G S GTF V+CSST+ G++K +S+ +SR RL++R
Sbjct: 38 LFTPAASTIRKRFCPSISMYQVGKSLSDGTFNSVVCSSTVEGADK-LSTDQSRVSRLVSR 96
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
GCKL+GCGSAVP L+ISNDDLAKIVDT+DEWISVRTGIRNRRVLSGK++LT LA EAA +
Sbjct: 97 GCKLIGCGSAVPALKISNDDLAKIVDTNDEWISVRTGIRNRRVLSGKDNLTDLAAEAARK 156
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
AL+MAEV+P D+DL+L+C+STPEDLFG A QI KALGCK+NPLA+DITAACSGF+LGLVS
Sbjct: 157 ALEMAEVDPNDIDLILLCSSTPEDLFGSAPQIQKALGCKSNPLAFDITAACSGFMLGLVS 216
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDV 246
AAC+IRGGGF+NVLV+G DALSR+ DWTDRG+CILFGDAAGAV++QACD +DGL FD+
Sbjct: 217 AACYIRGGGFKNVLVVGADALSRYVDWTDRGTCILFGDAAGAVVMQACDIGEDGLFGFDL 276
Query: 247 HSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306
HSDGEG RHLNA K N+++ A G+NGSV+ FPP+ SYS I MNGKEVFRFAVRVVPQ+
Sbjct: 277 HSDGEGQRHLNASFKENESDRACGTNGSVIGFPPKTSSYSCIQMNGKEVFRFAVRVVPQS 336
Query: 307 IESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLA 366
IE+ALE AGL S IDWLLLHQANQRIIDAVA RL+VP E VISNL+NYGNTSAASIPLA
Sbjct: 337 IEAALENAGLPQSKIDWLLLHQANQRIIDAVATRLEVPSEHVISNLSNYGNTSAASIPLA 396
Query: 367 LDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
LDEAVRSGKV+ GH IAAAGFGAGLTWGSAILRWG
Sbjct: 397 LDEAVRSGKVQAGHVIAAAGFGAGLTWGSAILRWG 431
|
Source: Capsicum annuum Species: Capsicum annuum Genus: Capsicum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 401 | ||||||
| TAIR|locus:2026167 | 404 | KAS III "3-ketoacyl-acyl carri | 0.997 | 0.990 | 0.739 | 8e-156 | |
| TIGR_CMR|BA_1184 | 310 | BA_1184 "3-oxoacyl-(acyl-carri | 0.461 | 0.596 | 0.452 | 2e-71 | |
| GENEDB_PFALCIPARUM|PFB0505c | 371 | PFB0505c "beta-ketoacyl-acyl c | 0.800 | 0.865 | 0.405 | 2.6e-70 | |
| UNIPROTKB|Q7KWI9 | 371 | KAS III "3-oxoacyl-(Acyl carri | 0.800 | 0.865 | 0.405 | 2.6e-70 | |
| TIGR_CMR|GSU_1601 | 326 | GSU_1601 "3-oxoacyl-(acyl-carr | 0.802 | 0.987 | 0.463 | 4.3e-70 | |
| TIGR_CMR|CBU_0493 | 319 | CBU_0493 "3-oxoacyl-(acyl-carr | 0.451 | 0.567 | 0.410 | 3.7e-68 | |
| TIGR_CMR|CHY_1450 | 330 | CHY_1450 "3-oxoacyl-(acyl-carr | 0.805 | 0.978 | 0.385 | 6.4e-60 | |
| TIGR_CMR|ECH_0448 | 319 | ECH_0448 "3-oxoacyl-(acyl-carr | 0.448 | 0.564 | 0.428 | 4.2e-59 | |
| TIGR_CMR|SO_2778 | 319 | SO_2778 "3-oxoacyl-(acyl-carri | 0.785 | 0.987 | 0.402 | 1.5e-58 | |
| TIGR_CMR|SPO_2494 | 323 | SPO_2494 "3-oxoacyl-(acyl-carr | 0.773 | 0.959 | 0.389 | 5.9e-57 |
| TAIR|locus:2026167 KAS III "3-ketoacyl-acyl carrier protein synthase III" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1519 (539.8 bits), Expect = 8.0e-156, P = 8.0e-156
Identities = 298/403 (73%), Positives = 334/403 (82%)
Query: 1 MASASGLFT-PSVPSLRRRVQPSTWKYRSGFCFSQGTFRRVLCSSTIA-GXXXXXXXXXX 58
MA+ASG FT PS+P+LR R+ SGFC S +RVLCSS +
Sbjct: 1 MANASGFFTHPSIPNLRSRIHVPVRVSGSGFCVSNRFSKRVLCSSVSSVDKDASSSPSQY 60
Query: 59 RAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTG 118
+ PRL+ GCKL+GCGSAVP+L ISNDDLAKIVDT+DEWI+ RTGIRNRRV+SGK+SL G
Sbjct: 61 QRPRLVPSGCKLIGCGSAVPSLLISNDDLAKIVDTNDEWIATRTGIRNRRVVSGKDSLVG 120
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACS 178
LAVEAA++AL+MAEV PED+DLVLMCTSTP+DLFG A QI KALGC NPLAYDITAACS
Sbjct: 121 LAVEAATKALEMAEVVPEDIDLVLMCTSTPDDLFGAAPQIQKALGCTKNPLAYDITAACS 180
Query: 179 GFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSED 238
GF+LGLVSAACHIRGGGF+NVLVIG D+LSRF DWTDRG+CILFGDAAGAV+VQACD ED
Sbjct: 181 GFVLGLVSAACHIRGGGFKNVLVIGADSLSRFVDWTDRGTCILFGDAAGAVVVQACDIED 240
Query: 239 DGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLA-FPPQHYSYSSIYMNGKEVFR 297
DGL SFDVHSDG+G RHLNA +K +Q + SNGSV FPP+ SYS I MNGKEVFR
Sbjct: 241 DGLFSFDVHSDGDGRRHLNASVKESQNDGESSSNGSVFGDFPPKQSSYSCIQMNGKEVFR 300
Query: 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGN 357
FAV+ VPQ+IESAL+KAGL S+IDWLLLHQANQRIID+VA RL P ERVISNLANYGN
Sbjct: 301 FAVKCVPQSIESALQKAGLPASAIDWLLLHQANQRIIDSVATRLHFPPERVISNLANYGN 360
Query: 358 TSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
TSAASIPLALDEAVRSGKVKPGHTIA +GFGAGLTWGSAI+RW
Sbjct: 361 TSAASIPLALDEAVRSGKVKPGHTIATSGFGAGLTWGSAIMRW 403
|
|
| TIGR_CMR|BA_1184 BA_1184 "3-oxoacyl-(acyl-carrier-protein) synthase III" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 433 (157.5 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 85/188 (45%), Positives = 128/188 (68%)
Query: 70 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQ 129
++G G VP ++N DL KI+DTSDEWI RTGI RR+ + +AVEA+ +AL+
Sbjct: 5 ILGIGRYVPEKVVTNHDLEKIMDTSDEWIRTRTGIAERRIADDTIDTSYMAVEASKKALE 64
Query: 130 MAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188
A ++ ED+DL+L+ T TP+ F A I +A+G K+ A D++AAC+GF+ G+++A
Sbjct: 65 DAGISGEDIDLILVATVTPDRAFPAVACVIQEAIGAKH-AAAMDLSAACAGFMYGMITAQ 123
Query: 189 CHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHS 248
I+ G ++NVLV+G D LS+ DW DR + +LFGD AGA+++ A SE G++SF++ +
Sbjct: 124 QFIQTGTYKNVLVVGSDKLSKIVDWNDRNTAVLFGDGAGAIVMGAV-SEGKGVLSFELGA 182
Query: 249 DGEGGRHL 256
DG GG+HL
Sbjct: 183 DGSGGKHL 190
|
|
| GENEDB_PFALCIPARUM|PFB0505c PFB0505c "beta-ketoacyl-acyl carrier protein synthase III precursor, putative" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 136/335 (40%), Positives = 219/335 (65%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
G K++G G + P+ +I ND+L K VDT+DEWI RTGI+ RR+L E+++ L +++A++
Sbjct: 50 GGKIIGHGHSYPSTEIYNDELKKYVDTNDEWIRTRTGIKKRRILKRDENISMLQIDSATQ 109
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
AL+ + + P D+D+V+ +STP++LFG A I +GCKN+ + D+TAAC+GF+ V+
Sbjct: 110 ALETSCLKPSDIDMVINASSTPQNLFGDANNISNKIGCKNS-VNMDLTAACTGFIFAFVT 168
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDS-EDDGLISFD 245
A + ++N+L++G DALS F DW DR +C+LFGDAAGAV++Q + E++ + ++
Sbjct: 169 AYNFLNR--YKNILIVGSDALSNFVDWRDRNTCVLFGDAAGAVVLQRTEEKEENKIFNYY 226
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305
+ SD E LN + N +D + P Y +YMNGKEVF++ + +P+
Sbjct: 227 LGSDSE----LNDLLTINFDHDKYNLD------KPNVNKYGKLYMNGKEVFKYTISNIPK 276
Query: 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPL 365
++ A++ + + + I++ + HQAN RII+ VA L++PM +V+ NL Y NTSAASIPL
Sbjct: 277 ILKKAIQHSNINIEDINYFIFHQANIRIIETVAKNLNIPMSKVLVNLDEYANTSAASIPL 336
Query: 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
E +++GK+K I GFGAG+++G IL++
Sbjct: 337 CFSENIKNGKIKTNDIICMCGFGAGMSYGCVILKY 371
|
|
| UNIPROTKB|Q7KWI9 KAS III "3-oxoacyl-(Acyl carrier protein) synthase III, putative" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 136/335 (40%), Positives = 219/335 (65%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
G K++G G + P+ +I ND+L K VDT+DEWI RTGI+ RR+L E+++ L +++A++
Sbjct: 50 GGKIIGHGHSYPSTEIYNDELKKYVDTNDEWIRTRTGIKKRRILKRDENISMLQIDSATQ 109
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
AL+ + + P D+D+V+ +STP++LFG A I +GCKN+ + D+TAAC+GF+ V+
Sbjct: 110 ALETSCLKPSDIDMVINASSTPQNLFGDANNISNKIGCKNS-VNMDLTAACTGFIFAFVT 168
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDS-EDDGLISFD 245
A + ++N+L++G DALS F DW DR +C+LFGDAAGAV++Q + E++ + ++
Sbjct: 169 AYNFLNR--YKNILIVGSDALSNFVDWRDRNTCVLFGDAAGAVVLQRTEEKEENKIFNYY 226
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305
+ SD E LN + N +D + P Y +YMNGKEVF++ + +P+
Sbjct: 227 LGSDSE----LNDLLTINFDHDKYNLD------KPNVNKYGKLYMNGKEVFKYTISNIPK 276
Query: 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPL 365
++ A++ + + + I++ + HQAN RII+ VA L++PM +V+ NL Y NTSAASIPL
Sbjct: 277 ILKKAIQHSNINIEDINYFIFHQANIRIIETVAKNLNIPMSKVLVNLDEYANTSAASIPL 336
Query: 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
E +++GK+K I GFGAG+++G IL++
Sbjct: 337 CFSENIKNGKIKTNDIICMCGFGAGMSYGCVILKY 371
|
|
| TIGR_CMR|GSU_1601 GSU_1601 "3-oxoacyl-(acyl-carrier-protein) synthase III" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 154/332 (46%), Positives = 205/332 (61%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
++VG GSAVP+ ++N DL K+VDTSDEW++ RTGI+ RR+ E + A AA RAL
Sbjct: 5 RIVGTGSAVPSKVLTNFDLEKMVDTSDEWVTTRTGIKERRIAVDGEYTSTFATLAAERAL 64
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188
+MA V D+DL+++ T TP+ F + ++ AYDI+AACSGF+ L A+
Sbjct: 65 EMAGVKASDLDLLIVATITPDFPFPATACVVQSNLKATKAAAYDISAACSGFIYALAQAS 124
Query: 189 CHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHS 248
IR G R LVIG + LSR DWTDR +C+LFGD AGAV+++ACD + G++S +HS
Sbjct: 125 NAIRSGSARKALVIGAEVLSRIIDWTDRNTCLLFGDGAGAVVLEACD-DGHGVLSTHLHS 183
Query: 249 DGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIE 308
DG L GN+ N +V Y + M G EVF+ AVR +
Sbjct: 184 DGSYWELLYQPGCGNR-------NPAVQKTLDDRRIY--LMMQGNEVFKLAVRAMEDAAL 234
Query: 309 SALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALD 368
AL+ GLT + I + HQAN+RIIDA+ RL +P E+V NL +GNTSAASIPLALD
Sbjct: 235 EALDANGLTPADISLFIPHQANRRIIDAIGKRLGLPGEKVYVNLDRFGNTSAASIPLALD 294
Query: 369 EAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
EA RSG++KP + FG GLTWGSA++RW
Sbjct: 295 EANRSGRIKPNDVVVFDAFGGGLTWGSALVRW 326
|
|
| TIGR_CMR|CBU_0493 CBU_0493 "3-oxoacyl-(acyl-carrier-protein) synthase III" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 76/185 (41%), Positives = 125/185 (67%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGK-ESLTGLAVEAASRA 127
++ G GS +P +SN DL K+V+T+DEWI R G+R R V++ ++ T +AV+AA RA
Sbjct: 5 RIQGVGSYIPQQILSNADLEKMVNTTDEWIMQRVGVRERHVIANSPDNTTTMAVDAAKRA 64
Query: 128 LQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
++MA ++P +D++++ T+T E F A + K L + + A+DI AAC+GF+ L
Sbjct: 65 IEMAGIDPAVIDMIIVGTATAEYYFPSTACLVQKHLNLREDIPAFDINAACAGFVYALSI 124
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDV 246
A +IR G +++LVIG D+L++ DW DR +CILFGD AGAV++QA ++ G+++ +
Sbjct: 125 ADQYIRNEGAKHILVIGVDSLTKVVDWKDRSTCILFGDGAGAVILQA--HKEPGILNTIL 182
Query: 247 HSDGE 251
H++G+
Sbjct: 183 HANGD 187
|
|
| TIGR_CMR|CHY_1450 CHY_1450 "3-oxoacyl-(acyl-carrier-protein) synthase III" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 129/335 (38%), Positives = 205/335 (61%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
G +++G G VP ++N +L +DT+DEWI RTGIR RR+ S +E+ +A A+ +
Sbjct: 7 GIEILGTGYYVPEKVLTNKELESRLDTTDEWIVTRTGIRERRIASPEETTLSMAYYASEK 66
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLV 185
A+Q A++ P ++ L+++ T+TP+ +F A Q+ + +G N A+D++ C+GF+ LV
Sbjct: 67 AIQKAKIEPGEIGLIIVATATPDMIFPATAAQLQEKIGATNAG-AFDLSIGCTGFIYALV 125
Query: 186 SAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFD 245
+ A + + + VLV+G + LS DW DR + +LFGD AGAV++ + + G+++F+
Sbjct: 126 TGALYTKVLYPQKVLVVGAEKLSAIVDWQDRSTAVLFGDGAGAVIL-GVNPQKAGILAFE 184
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305
+ +DG G L G++ L ++ + H+ I MNG EVF+FAV+ + +
Sbjct: 185 LGADGSGAELLKLPAGGSK----LPASAETVE-KRLHF----IKMNGSEVFKFAVKKIEE 235
Query: 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPL 365
++ LEKA L ID L HQAN+RII RL + +E+ N+ YGNTSAASIP+
Sbjct: 236 SVNGLLEKAKLQPDDIDLYLFHQANRRIIVNSLERLALDIEKTFINIELYGNTSAASIPI 295
Query: 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
ALDEA+ +GK+K G + +GFGAGL WG I+ +
Sbjct: 296 ALDEAIHAGKLKKGDKLLLSGFGAGLAWGGLIMEY 330
|
|
| TIGR_CMR|ECH_0448 ECH_0448 "3-oxoacyl-(acyl-carrier-protein) synthase III" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 376 (137.4 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 78/182 (42%), Positives = 111/182 (60%)
Query: 70 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQ 129
++G GS +P ++ND+LA V+TSDEWI RTGI+ R + E + +A AA AL
Sbjct: 6 ILGIGSYLPKKIVTNDELALTVETSDEWIVKRTGIKQRHIAENNEMTSDMAANAARLALT 65
Query: 130 MAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188
A V+ +D+ L+++ T+TP+ F AT + L CKN A+DI A CSGF+ + A
Sbjct: 66 DACVHKDDIGLIIVATTTPDRTFPSCATIVQDKLECKN-AFAFDIQAVCSGFVYAISIAD 124
Query: 189 CHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHS 248
I+ G LVIG + +SR DW DR +C+LFGD AGAV++ +D G+IS +HS
Sbjct: 125 NFIKSGQVNTALVIGAEIMSRILDWQDRSTCVLFGDGAGAVVLGNNSEKDSGIISTILHS 184
Query: 249 DG 250
DG
Sbjct: 185 DG 186
|
|
| TIGR_CMR|SO_2778 SO_2778 "3-oxoacyl-(acyl-carrier-protein) synthase III" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 134/333 (40%), Positives = 195/333 (58%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
K++G GS VP SN DL K+V+TSD+WI RTGI RR+ + E+++ + AA AL
Sbjct: 4 KILGTGSYVPVQVRSNQDLEKMVETSDQWIVERTGISERRIAAQDETVSTMGYLAALNAL 63
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187
+MA + D+D+++ T++ + F A +I LG P A+DI AACSGF+ L A
Sbjct: 64 EMAGIEASDLDMIICGTTSAANAFPAAACEIQAMLGVHTIP-AFDIAAACSGFVYALSVA 122
Query: 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVH 247
++ G + VLVIG D LSR + DR + ILFGD AGA ++ A S++ G+IS ++
Sbjct: 123 DQFVKNGTAKKVLVIGADVLSRLCEPEDRTTIILFGDGAGAAIIGA--SDEPGIISTHIY 180
Query: 248 SDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307
+DG G L Q G + F + M G +VF+ AV + +
Sbjct: 181 ADGRQGDLLKCAFPPRQ-----GETSEAVGF---------MTMKGNDVFKVAVTQLSHVV 226
Query: 308 ESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLAL 367
L + S IDWL+ HQAN RII+A A +LD+ +++V+ LA +GNTSAAS+P+AL
Sbjct: 227 TETLRLNNIDKSEIDWLVPHQANFRIINATAKKLDMSLDKVVLTLAKHGNTSAASVPIAL 286
Query: 368 DEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
DEAVR G+++ G + FGAG WGSA++R+
Sbjct: 287 DEAVRDGRIQRGQLLLLEAFGAGFAWGSALVRF 319
|
|
| TIGR_CMR|SPO_2494 SPO_2494 "3-oxoacyl-(acyl-carrier-protein) synthase III" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 130/334 (38%), Positives = 190/334 (56%)
Query: 72 GCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMA 131
G G +P + N K +DT+DEWI R+GI R + E+ + LA AA AL A
Sbjct: 9 GVGHYLPERVVPNAAFEKTLDTTDEWIRSRSGIERRHFAAEGETTSDLATRAAEAALADA 68
Query: 132 EVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190
++ E +D +++ TST + F AT + LG N A+D+ A C+GF+ L +A
Sbjct: 69 GISAEQIDAIVLATSTADLTFPSAATMVQARLGMTNG-YAFDVQAVCAGFVYALSNANAL 127
Query: 191 IRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE----DDGLISFDV 246
I G + VLVIG + SR DWTDR +C+LFGD AGA++++ + E D G++S D+
Sbjct: 128 IVSGQAKRVLVIGAETFSRIMDWTDRSTCVLFGDGAGALVLEYEEGEGTPQDRGILSVDL 187
Query: 247 HSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306
+SDG R+ D L +G V H + M G +VFR AV + QT
Sbjct: 188 NSDG---RY----------KDLLYVDGGVSTQTTGH-----LRMQGNQVFRHAVEKLAQT 229
Query: 307 IESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLA 366
E+AL+KAGL+ + +DW++ HQAN RII A ++ +PM++V+ + ++GNTSAASIPLA
Sbjct: 230 AETALDKAGLSSADVDWIVPHQANIRIIQGTAKKMGLPMDKVVVTVQDHGNTSAASIPLA 289
Query: 367 LDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
L G++K G + G GL WG+ +LRW
Sbjct: 290 LSVGKARGQIKTGDLVVTEAIGGGLAWGAVVLRW 323
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q3M9J4 | FABH_ANAVT | 2, ., 3, ., 1, ., 4, 1 | 0.5311 | 0.8154 | 0.9909 | yes | no |
| Q7V4F6 | FABH_PROMM | 2, ., 3, ., 1, ., 1, 8, 0 | 0.5311 | 0.8204 | 0.9705 | yes | no |
| P73951 | FABH_SYNY3 | 2, ., 3, ., 1, ., 1, 8, 0 | 0.5209 | 0.8079 | 0.9818 | N/A | no |
| Q5N5X5 | FABH_SYNP6 | 2, ., 3, ., 1, ., 4, 1 | 0.5370 | 0.8079 | 0.9671 | yes | no |
| Q7VE55 | FABH_PROMA | 2, ., 3, ., 1, ., 1, 8, 0 | 0.5269 | 0.8104 | 0.9615 | yes | no |
| Q8DKL4 | FABH_THEEB | 2, ., 3, ., 1, ., 1, 8, 0 | 0.5253 | 0.8104 | 0.9878 | yes | no |
| B2A2M5 | FABH_NATTJ | 2, ., 3, ., 1, ., 1, 8, 0 | 0.4268 | 0.8029 | 0.9787 | yes | no |
| B0JXE2 | FABH_MICAN | 2, ., 3, ., 1, ., 1, 8, 0 | 0.5662 | 0.8054 | 0.9699 | yes | no |
| Q7V3E0 | FABH_PROMP | 2, ., 3, ., 1, ., 1, 8, 0 | 0.4704 | 0.8054 | 0.9641 | yes | no |
| A2BUB2 | FABH_PROM5 | 2, ., 3, ., 1, ., 4, 1 | 0.4746 | 0.8129 | 0.9731 | yes | no |
| A8G2E1 | FABH_PROM2 | 2, ., 3, ., 1, ., 4, 1 | 0.4567 | 0.8129 | 0.9731 | yes | no |
| P49245 | FABH2_CUPWR | 2, ., 3, ., 1, ., 1, 8, 0 | 0.7227 | 0.9950 | 0.9925 | N/A | no |
| P49244 | FABH1_CUPWR | 2, ., 3, ., 1, ., 1, 8, 0 | 0.7331 | 0.9975 | 1.0 | N/A | no |
| P49243 | FABH_ARATH | 2, ., 3, ., 1, ., 1, 8, 0 | 0.75 | 0.9950 | 0.9876 | yes | no |
| A3PAK3 | FABH_PROM0 | 2, ., 3, ., 1, ., 4, 1 | 0.4746 | 0.8129 | 0.9731 | yes | no |
| Q46HN8 | FABH_PROMT | 2, ., 3, ., 1, ., 4, 1 | 0.5044 | 0.8179 | 0.9704 | yes | no |
| B0CE67 | FABH_ACAM1 | 2, ., 3, ., 1, ., 1, 8, 0 | 0.5508 | 0.8079 | 0.9759 | yes | no |
| A5GP11 | FABH_SYNPW | 2, ., 3, ., 1, ., 4, 1 | 0.5357 | 0.8029 | 0.9554 | yes | no |
| A4XJW0 | FABH_CALS8 | 2, ., 3, ., 1, ., 1, 8, 0 | 0.4583 | 0.8079 | 0.9878 | yes | no |
| Q114K0 | FABH_TRIEI | 2, ., 3, ., 1, ., 4, 1 | 0.5186 | 0.7905 | 0.9635 | yes | no |
| Q31D45 | FABH_PROM9 | 2, ., 3, ., 1, ., 4, 1 | 0.4716 | 0.8129 | 0.9731 | yes | no |
| Q07510 | FABH_SPIOL | 2, ., 3, ., 1, ., 1, 8, 0 | 0.7266 | 0.9975 | 0.9876 | N/A | no |
| A5GQJ2 | FABH_SYNR3 | 2, ., 3, ., 1, ., 4, 1 | 0.5148 | 0.8129 | 0.9789 | yes | no |
| Q7NF35 | FABH_GLOVI | 2, ., 3, ., 1, ., 1, 8, 0 | 0.4850 | 0.8079 | 0.9848 | yes | no |
| Q8Z062 | FABH_NOSS1 | 2, ., 3, ., 1, ., 1, 8, 0 | 0.5489 | 0.8154 | 0.9909 | yes | no |
| Q31N84 | FABH_SYNE7 | 2, ., 3, ., 1, ., 4, 1 | 0.5370 | 0.8079 | 0.9671 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.983 |
| 3rd Layer | 2.3.1.180 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 401 | |||
| PLN02326 | 379 | PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| PRK09352 | 319 | PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei | 1e-160 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 1e-146 | |
| COG0332 | 323 | COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | 1e-138 | |
| PRK12879 | 325 | PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei | 1e-128 | |
| CHL00203 | 326 | CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn | 1e-118 | |
| TIGR00747 | 318 | TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) | 1e-118 | |
| PRK05963 | 326 | PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protei | 3e-65 | |
| cd00827 | 324 | cd00827, init_cond_enzymes, "initiating" condensin | 5e-52 | |
| pfam08541 | 90 | pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- | 2e-47 | |
| PRK07204 | 329 | PRK07204, PRK07204, 3-oxoacyl-(acyl carrier protei | 3e-44 | |
| PRK12880 | 353 | PRK12880, PRK12880, 3-oxoacyl-(acyl carrier protei | 8e-40 | |
| pfam08545 | 80 | pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-pr | 5e-31 | |
| PRK07515 | 372 | PRK07515, PRK07515, 3-oxoacyl-(acyl carrier protei | 5e-28 | |
| PRK06840 | 339 | PRK06840, PRK06840, hypothetical protein; Validate | 1e-27 | |
| COG3425 | 377 | COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synt | 8e-24 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 1e-20 | |
| PRK09258 | 338 | PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protei | 1e-19 | |
| cd00831 | 361 | cd00831, CHS_like, Chalcone and stilbene synthases | 3e-18 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 3e-17 | |
| PRK06816 | 378 | PRK06816, PRK06816, 3-oxoacyl-(acyl carrier protei | 4e-16 | |
| COG3424 | 356 | COG3424, BcsA, Predicted naringenin-chalcone synth | 3e-14 | |
| TIGR00748 | 345 | TIGR00748, HMG_CoA_syn_Arc, hydroxymethylglutaryl- | 6e-12 | |
| PRK04262 | 347 | PRK04262, PRK04262, hypothetical protein; Provisio | 8e-09 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 9e-09 | |
| PRK04262 | 347 | PRK04262, PRK04262, hypothetical protein; Provisio | 6e-06 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 7e-06 | |
| PLN03172 | 393 | PLN03172, PLN03172, chalcone synthase family prote | 2e-04 | |
| pfam02797 | 151 | pfam02797, Chal_sti_synt_C, Chalcone and stilbene | 6e-04 | |
| PLN03170 | 401 | PLN03170, PLN03170, chalcone synthase; Provisional | 0.001 | |
| PRK08313 | 386 | PRK08313, PRK08313, acetyl-CoA acetyltransferase; | 0.003 |
| >gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Score = 621 bits (1603), Expect = 0.0
Identities = 259/374 (69%), Positives = 300/374 (80%), Gaps = 2/374 (0%)
Query: 28 SGFCFSQGTFRRVLCSS-TIAGSEKSVSSSESRAPRLINRGCKLVGCGSAVPTLQISNDD 86
C S +RV CSS T S+S+ R PR + G KLVGCGSAVP L I+NDD
Sbjct: 7 PVACASSRFAKRVRCSSVTTVDGASRPSASKYRRPRRVGSGSKLVGCGSAVPKLLITNDD 66
Query: 87 LAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTS 146
L+K+VDTSDEWI+ RTGIRNRRVLSG E+LT LAVEAA +AL+MA V+PEDVDLVL+CTS
Sbjct: 67 LSKLVDTSDEWIATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTS 126
Query: 147 TPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDA 206
+P+DLFG A Q+ ALGC N LA+D+TAACSGF+LGLV+AA IRGGG++NVLVIG DA
Sbjct: 127 SPDDLFGSAPQVQAALGCTN-ALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADA 185
Query: 207 LSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTN 266
LSR+ DWTDRG+CILFGD AGAV++QACD ++DGL+ FD+HSDG G +HL+A KG +
Sbjct: 186 LSRYVDWTDRGTCILFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDD 245
Query: 267 DALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLL 326
+ G+ V FPP+ SYS I MNGKEVF+FAVR VPQ IESAL+KAGLT SIDWLLL
Sbjct: 246 SSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTAESIDWLLL 305
Query: 327 HQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAG 386
HQANQRIIDAVA RL +P E+VISNLANYGNTSAASIPLALDEAVRSGKVK G IA AG
Sbjct: 306 HQANQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAG 365
Query: 387 FGAGLTWGSAILRW 400
FGAGLTWGSAI+RW
Sbjct: 366 FGAGLTWGSAIVRW 379
|
Length = 379 |
| >gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 451 bits (1164), Expect = e-160
Identities = 164/338 (48%), Positives = 220/338 (65%), Gaps = 20/338 (5%)
Query: 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAA 124
K++G GS +P ++NDDL K+VDTSDEWI RTGI+ RR+ + E+ + LA EAA
Sbjct: 1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAA 60
Query: 125 SRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLG 183
+AL+ A ++PED+DL+++ T+TP+ F A + LG KN A+D++AACSGF+
Sbjct: 61 KKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAA-AFDLSAACSGFVYA 119
Query: 184 LVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLIS 243
L +A IR G ++NVLVIG + LSR DWTDR +C+LFGD AGAV++ A SE+ G++S
Sbjct: 120 LSTADQFIRSGAYKNVLVIGAEKLSRIVDWTDRSTCVLFGDGAGAVVLGA--SEEPGILS 177
Query: 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303
+ SDG G L L GS P + + M G+EVF+FAVR +
Sbjct: 178 THLGSDGSYGDLLY-----------LPGGGSRGPASPGY-----LRMEGREVFKFAVREL 221
Query: 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASI 363
+ ALE AGLT IDWL+ HQAN RIIDA A +L +PME+V+ + YGNTSAASI
Sbjct: 222 AKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASI 281
Query: 364 PLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
PLALDEAVR G++K G + GFG GLTWG+A++RW
Sbjct: 282 PLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319
|
Length = 319 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 416 bits (1072), Expect = e-146
Identities = 168/333 (50%), Positives = 224/333 (67%), Gaps = 14/333 (4%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
+++G GS +P ++ND+L K +DTSDEWI RTGIR RR+ E+ + LAVEAA +
Sbjct: 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKK 60
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLV 185
AL+ A ++ +D+DL+++ TSTP+ LF A + LG KN A+DI AACSGFL GL
Sbjct: 61 ALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKN-AAAFDINAACSGFLYGLS 119
Query: 186 SAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFD 245
+AA IR GG +NVLV+G + LSR DWTDR + +LFGD AGAV+++A + ED G++
Sbjct: 120 TAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATE-EDPGILDSV 178
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305
+ SDG G L + + GS F + M+G+EVF+FAVR++P+
Sbjct: 179 LGSDGSGADLLT-----------IPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPE 227
Query: 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPL 365
+IE ALEKAGLT IDW + HQAN RII+AVA RL +P E+V+ NL YGNTSAASIPL
Sbjct: 228 SIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPL 287
Query: 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAIL 398
ALDEA+ GK+K G + GFGAGLTWG+A+L
Sbjct: 288 ALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
| >gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-138
Identities = 164/338 (48%), Positives = 223/338 (65%), Gaps = 16/338 (4%)
Query: 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAA 124
K++G GS +P ++N DL K VDTSDEWI RTGIR RR+ + E+ + LAVEAA
Sbjct: 1 MMNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAA 60
Query: 125 SRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLG 183
+AL+ A ++P+D+DL+++ TSTP+ LF A + LG P A+D+ AACSGFL
Sbjct: 61 RKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP-AFDLQAACSGFLYA 119
Query: 184 LVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLIS 243
L A IR GG++NVLV+G + LSR DWTDR +C+LFGD AGAV+++A + +D+G++
Sbjct: 120 LSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGDGAGAVVLEATE-DDNGILD 178
Query: 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303
D+ SDG G L G A P + + M+G+EVF+FAVR +
Sbjct: 179 TDLGSDGSQGDLLYL-------------PGGGSATPKEESGGGLLVMDGREVFKFAVRAM 225
Query: 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASI 363
P+ IE LEKAGLT IDW + HQAN RII+A+A +L +P E+V+ + YGNTSAASI
Sbjct: 226 PKAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASI 285
Query: 364 PLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
PLALDEA+R G++KPG + FG GLTWG+A++RWG
Sbjct: 286 PLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323
|
Length = 323 |
| >gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 371 bits (956), Expect = e-128
Identities = 152/334 (45%), Positives = 216/334 (64%), Gaps = 15/334 (4%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
++ G G+ VP ++NDDL +DTSDEWI RTGI+ RR+ +E + LA++AA RAL
Sbjct: 6 RITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERAL 65
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187
A ++ ED+DL+++ T+TP+ LF A+Q+ LG N A+DI AAC+GFL GL +A
Sbjct: 66 ARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAA-AFDINAACAGFLYGLETA 124
Query: 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVH 247
I G ++ VLVIG + LS+ TD+TDR +CILFGD AGAV+++A + G I + +
Sbjct: 125 NGLITSGLYKKVLVIGAERLSKVTDYTDRTTCILFGDGAGAVVLEA-TENEPGFIDYVLG 183
Query: 248 SDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307
+DG+GG L G + S Y I NG+EVF++AVR +P+
Sbjct: 184 TDGDGGDILYRTGLGTTMDRDALSGD--------GY----IVQNGREVFKWAVRTMPKGA 231
Query: 308 ESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLAL 367
LEKAGLT IDW++ HQAN RII+++ +L +PME+ + ++ YGNTSAA+IPLAL
Sbjct: 232 RQVLEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLAL 291
Query: 368 DEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
D A+ GK+KPG T+ GFGAGLTW + +++WG
Sbjct: 292 DLALEQGKIKPGDTLLLYGFGAGLTWAALLVKWG 325
|
Length = 325 |
| >gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Score = 346 bits (890), Expect = e-118
Identities = 153/334 (45%), Positives = 222/334 (66%), Gaps = 10/334 (2%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
G ++ GS+VP + N I++TSD WIS RTGI+ R + SLT LA EAA++
Sbjct: 2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANK 61
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
AL A ++P ++DL+++ TSTP+DLFG A+Q+ +G +A+DITAACSGF+L LV+
Sbjct: 62 ALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGA-TRAVAFDITAACSGFILALVT 120
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDV 246
A I+ G ++N+LV+G D LS++ DW+DR +CILFGD AGA ++ A ++ ++ F +
Sbjct: 121 ATQFIQNGSYKNILVVGADTLSKWIDWSDRKTCILFGDGAGAAIIGAS--YENSILGFKL 178
Query: 247 HSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306
+DG+ HL N+ + + L Y SI MNGKEV++FAV VP
Sbjct: 179 CTDGKLNSHLQLM---NKPVNNQSFGTTKLP----QGQYQSISMNGKEVYKFAVFQVPAV 231
Query: 307 IESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLA 366
I L +++ +DW +LHQAN+RI++A+ANRL VP ++I+NL YGNTSAASIPLA
Sbjct: 232 IIKCLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLA 291
Query: 367 LDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
LDEA+++ K++PG I +GFGAGLTWG+ +L+W
Sbjct: 292 LDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325
|
Length = 326 |
| >gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Score = 346 bits (889), Expect = e-118
Identities = 144/335 (42%), Positives = 208/335 (62%), Gaps = 21/335 (6%)
Query: 68 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRA 127
++G GS +P ++N DL K+VDTSDEWI RTGI+ RR+ + E+ + + EAA RA
Sbjct: 3 AGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRA 62
Query: 128 LQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
++ A ++ +D+DL+++ T+TP+ F A + LG K P A+D++AAC+GF+ L
Sbjct: 63 IENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIP-AFDLSAACAGFIYALSV 121
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDG-LISFD 245
A +I G ++ VLV+G + LS DWTDRG+C+LFGD AGAV++ SED G +IS
Sbjct: 122 AKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGDGAGAVVLGE--SEDPGGIISTH 179
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305
+ +DG G L ++G P + I M G EVF+ AVR +
Sbjct: 180 LGADGTQGEALY------LPAGGRPTSG------PSPF----ITMEGNEVFKHAVRKMGD 223
Query: 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPL 365
+E LE GL IDW + HQAN RII+A+A RL++ M +V+ + YGNTSAASIPL
Sbjct: 224 VVEETLEANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPL 283
Query: 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
ALDE +R+G++KPG + FG GLTWG+A++R+
Sbjct: 284 ALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318
|
FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 318 |
| >gnl|CDD|180328 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 3e-65
Identities = 114/339 (33%), Positives = 172/339 (50%), Gaps = 18/339 (5%)
Query: 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAAS 125
++ G G AVP ++ N ++ + WI RTGIR RR + E+L+ LA A
Sbjct: 2 CSSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGD 61
Query: 126 RALQMAEVNPEDVDLVLMCTSTPEDLFG-GATQIPKALGCKNNPLAYDITAACSGFLLGL 184
AL A + D+ L L+ TSTP+ L A + LG +N+ A D+ AC+GFL L
Sbjct: 62 MALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG-AIDLAGACAGFLYAL 120
Query: 185 VSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISF 244
V A +R G + VLV+ + LSR + +R S +LF DAAGAV++ + G++
Sbjct: 121 VLADGFVRAQG-KPVLVVAANILSRRINMAERASAVLFADAAGAVVLAPSAKANSGVLGS 179
Query: 245 DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYM---NGKEVFRFAVR 301
+ SDG + + + GS F P+ + S M +G+ VF AVR
Sbjct: 180 QLISDGSHYDLI-----------KIPAGGSARPFAPERDA-SEFLMTMQDGRAVFTEAVR 227
Query: 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAA 361
++ ++ L A +T ID HQAN RI+D V + +P + S L YGN+SAA
Sbjct: 228 MMSGASQNVLASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAASTLETYGNSSAA 287
Query: 362 SIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
+IPL+L A ++ G + A GAG+T G+ ++R
Sbjct: 288 TIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326
|
Length = 326 |
| >gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Score = 176 bits (447), Expect = 5e-52
Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 26/338 (7%)
Query: 70 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQ 129
+ G+ +P ++ N++LA+ + + TGI R + E + +AVEAA RAL+
Sbjct: 4 IEAIGAYLPRYRVDNEELAEGL--GVDPGKYTTGIGQRHMAGDDEDVPTMAVEAARRALE 61
Query: 130 MAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188
A ++P+D+ L+++ T +P D AT + + LG N A+D+ AC G L AA
Sbjct: 62 RAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAE-AFDLKQACYGGTAALQLAA 120
Query: 189 CHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSED---DGLISFD 245
+ G +R LV+ D S D GD A A+LV + G++S
Sbjct: 121 NLVESGPWRYALVVASDIASYLLDEGSALEPT-LGDGAAAMLV--SRNPGILAAGIVSTH 177
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305
SD + G + + G+ VF A +++ +
Sbjct: 178 STSDPGYDFSPYPVMDGGYPKPC--KLAYAIRLTAEPA--------GRAVFEAAHKLIAK 227
Query: 306 TIESALEKAGLTMSSIDWLLLHQAN-QRIIDAVANRLDVPMERV----ISNLANYGNTSA 360
+ AL++AGL+ ID+ + HQ N ++I++AVA +L P E+ L GN A
Sbjct: 228 VVRKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYA 286
Query: 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAIL 398
ASI L L + SGK+K G + +G+G T + +L
Sbjct: 287 ASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324 |
| >gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 2e-47
Identities = 63/90 (70%), Positives = 71/90 (78%)
Query: 311 LEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA 370
LEKAGLT IDW + HQAN RIIDAVA RL +P E+V+ NL YGNTSAASIPLALDEA
Sbjct: 1 LEKAGLTPDDIDWFVPHQANLRIIDAVAKRLGLPPEKVVVNLDRYGNTSAASIPLALDEA 60
Query: 371 VRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
V GK+KPG + GFGAGLTWG+A+LRW
Sbjct: 61 VEEGKLKPGDLVLLVGFGAGLTWGAAVLRW 90
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 90 |
| >gnl|CDD|235964 PRK07204, PRK07204, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 3e-44
Identities = 97/343 (28%), Positives = 178/343 (51%), Gaps = 24/343 (6%)
Query: 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAAS 125
R + G G+ +P ++ + +L K +D + W+ ++G++ R + G E+ + + EAA
Sbjct: 3 RYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVDG-ETSSYMGAEAAK 61
Query: 126 RALQMAEVNPEDVD-LVLMCTSTPEDLFGGATQIPKALGCKNNPLA-YDITAACSGFLLG 183
+A++ A++ +D+D ++ + + + A+ I + LG +++ + +DI + C F+
Sbjct: 62 KAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITA 121
Query: 184 LVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLIS 243
L + + I G ++ VL+I + S +W SCILFGD A AV++ D L S
Sbjct: 122 LDTISYAIECGRYKRVLIISSEISSVGLNWGQNESCILFGDGAAAVVITKGDHSSRILAS 181
Query: 244 -FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSS-----IYMNGKEVFR 297
+ +S G HL+ I+G T P+ YS MNG+ +F+
Sbjct: 182 HMETYSSGA---HLSE-IRGGGT-----------MIHPREYSEERKEDFLFDMNGRAIFK 226
Query: 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGN 357
+ + + + I+ L AG T++ ID ++ HQA+ + + +L V ER ++ ++GN
Sbjct: 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERFVTIFEDHGN 286
Query: 358 TSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
AASIP+AL EA++ KV+ G+ I G AGL+ G +L +
Sbjct: 287 MIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329
|
Length = 329 |
| >gnl|CDD|171793 PRK12880, PRK12880, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 145 bits (366), Expect = 8e-40
Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 16/337 (4%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVR----TGIRNRRVLSGKESLTGLAVEAA 124
K+ G +VP +I DD + V ++D R G+ R + ++ L AA
Sbjct: 9 KISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAA 68
Query: 125 SRALQMAEVNPEDVDLVLMCTSTPEDLF--GGATQIPKALGCKNNPLAYDITAACSGFLL 182
+ LQ ++ +D +++ T +P D F A + + L + +A+D+ AC+G+L
Sbjct: 69 NTLLQGLNIDKNSLDALIVVTQSP-DFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLY 127
Query: 183 GLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLI 242
GL A I+ G +L+I GD LS+F + +FGD A L++ D +
Sbjct: 128 GLFVAHSLIQSG-LGKILLICGDTLSKFIHPKNMNLAPIFGDGVSATLIEKTDFNEA--- 183
Query: 243 SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302
F++ SDG+ L + A N L + ++YM+G +F A+
Sbjct: 184 FFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALEC 243
Query: 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL-ANYGNTSAA 361
P++ + LE + + I + L HQ+N ++D + L + ++V + + Y N SA
Sbjct: 244 EPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSAC 303
Query: 362 SIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAIL 398
S+P L E + K + + FGAGL+WGSA+L
Sbjct: 304 SLPALLCELDTPKEFKA----SLSAFGAGLSWGSAVL 336
|
Length = 353 |
| >gnl|CDD|203976 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-31
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 171 YDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVL 230
+DI AACSGF+ L +AA IR G +NVLV+G + LSR DWTDR + +LFGD AGAV+
Sbjct: 1 FDINAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVV 60
Query: 231 VQACDSEDDGLISFDVHSDG 250
++A + ++S + SDG
Sbjct: 61 LEATEEGGARILSSVLGSDG 80
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 80 |
| >gnl|CDD|236037 PRK07515, PRK07515, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-28
Identities = 82/299 (27%), Positives = 123/299 (41%), Gaps = 46/299 (15%)
Query: 120 AVEAASRALQMAEVNPEDVDLVLM-CTSTPEDLFGGATQIPKALGCKNNPLAYDITAACS 178
V AA +AL A ED+D V++ C++ A +I +ALG + A+D+ ACS
Sbjct: 99 GVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG--FAFDMNVACS 156
Query: 179 GFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSED 238
G+ +AA IR G R VLV+ + S ++ DR S +FGD A AV+V+ D+
Sbjct: 157 SATFGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTAT 216
Query: 239 DGLISFDVHSD--------------GEGGRHLNACIKGNQTN-DALGSNGSVLAFPPQHY 283
F++ G LN D L
Sbjct: 217 SAG-GFEILGTRLFTQFSNNIRNNFG----FLNRADPEGIGARDKL-------------- 257
Query: 284 SYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRL-- 341
G++VF+ +V + I L + GLT + + LHQAN + + ++
Sbjct: 258 ----FVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANINMNQLIGKKVLG 313
Query: 342 -DVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 399
D E L Y NTS+A +A + S + G FGAG + GS I+R
Sbjct: 314 RDATPEEAPVILDEYANTSSAGSIIAFHKH--SDDLAAGDLGVICSFGAGYSIGSVIVR 370
|
Length = 372 |
| >gnl|CDD|235872 PRK06840, PRK06840, hypothetical protein; Validated | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-27
Identities = 84/354 (23%), Positives = 146/354 (41%), Gaps = 46/354 (12%)
Query: 70 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQ 129
+VG G +P ++ +++A+ +E + + GI + V ++ + +A+ AA AL+
Sbjct: 7 IVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALK 66
Query: 130 MAEVNPEDVDLVLMCTSTPED--LFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187
A V+P +D+V+ S +D ++ A +I +G KN A+DI A C+ F + L A
Sbjct: 67 QAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKN-AWAFDIMAVCASFPIALKVA 125
Query: 188 ACHIRGGG-FRNVLVIGGDALSRFTDWTDRGSCILF--GDAAGAVLVQACDSEDDGLISF 244
+ NVL++GG S D+ + + +F A L++
Sbjct: 126 KDLLYSDPSIENVLLVGGYRNSDLVDYDNPRTRFMFNFAAGGSAALLK------------ 173
Query: 245 DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLA----FPPQHYSYSSIYMNGKEVFR--- 297
D R L + I T+ + + V A P + N +
Sbjct: 174 ---KDAGKNRILGSAII---TDGSFSEDVRVPAGGTKQPASPETVE----NRQHYLDVID 223
Query: 298 ---FAVRVVP-------QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMER 347
R+ + I AL K+G T ID+L + + A+ L + E+
Sbjct: 224 PESMKERLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQ 283
Query: 348 VISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
I L YG+ L+L A+ GK+K G + G G TW + ++RWG
Sbjct: 284 AIY-LDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336
|
Length = 339 |
| >gnl|CDD|225959 COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 8e-24
Identities = 76/326 (23%), Positives = 122/326 (37%), Gaps = 37/326 (11%)
Query: 71 VGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQM 130
VG G+ +P +I ++LA+ E I G+ + V E +AVEAA AL+
Sbjct: 6 VGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKR 65
Query: 131 AEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189
A+++P + V++ + + D AT + +ALG + A D+ AC L +A
Sbjct: 66 ADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIG 125
Query: 190 HIRGGGFRNVLVIGGDALSRFTDWTDRGSC--ILFGDAAGAVLVQACDSEDDGLISFDVH 247
+ G LVIG D T G G A A L+ + I +
Sbjct: 126 WVESGMISYGLVIGAD-----TAQYAPGDALEYTAGAGAVAFLI-----GKNPPIVAEFE 175
Query: 248 SDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307
G + + Y++G+ + V
Sbjct: 176 GTGSYTTDTPDFWRPDGQPYP--------------------YVDGRFSEPAYFKHVENAA 215
Query: 308 ESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLA---NYGNTSAASIP 364
+ +EK GL+ D+++ HQ N + A L E+V L GNT S+
Sbjct: 216 KGYMEKTGLSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLL 275
Query: 365 LALDEAVRSGKVKPGHTIAAAGFGAG 390
L L + + K PG I +G+G
Sbjct: 276 LGLASLLDNAK-LPGDRILLFSYGSG 300
|
Length = 377 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 91.5 bits (227), Expect = 1e-20
Identities = 82/352 (23%), Positives = 118/352 (33%), Gaps = 105/352 (29%)
Query: 119 LAVEAASRALQMA----EVNPEDVDLVLMCTSTPEDLFG---------------GATQIP 159
L EAA RA+ A E + V++ T F P
Sbjct: 14 LGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFP 73
Query: 160 KALGCKNNPL-----AYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTD-- 212
A G PL AYD++AAC+G L L AA ++ G VL G + L+ D
Sbjct: 74 GASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCE 133
Query: 213 ----------------WTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHL 256
+ +FGD AGA++V+ + L G H+
Sbjct: 134 FDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVE---ELEHAL---------ARGAHI 181
Query: 257 NACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGL 316
A I G A +G+ G F + + + + AL AGL
Sbjct: 182 YAEIVGT----AATIDGA-----------------GMGAFAPSAEGLARAAKEALAVAGL 220
Query: 317 TMSSIDWLLLHQANQRIIDAVANRL----DVPMERVISN-LANYGNTSAASIPLALDEAV 371
T+ ID+L+ H I D +L +S A GN S+A++ LA+DEAV
Sbjct: 221 TVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAV 280
Query: 372 RSGKVK-------------------------PGHTIAAAGFGAGLTWGSAIL 398
+ T GFG G T + +L
Sbjct: 281 LMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|181732 PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 1e-19
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 27/300 (9%)
Query: 102 TGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGAT--QIP 159
TGIR RR L+ A+ A +AL A ++P D+ L++ TS D AT ++
Sbjct: 47 TGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLIN-TSVCRDYLEPATACRVH 105
Query: 160 KALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWT-DRGS 218
LG + +D++ AC GFL G++ AA I G LV+ G++ + T DR
Sbjct: 106 HNLGLPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVEATIDR-- 163
Query: 219 CILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQ--TNDALGSNGSVL 276
L+ + +D SF + G G A + G V
Sbjct: 164 -----------LLAPETTREDFAQSFATLTLGSGAA---AAVLTRGSLHPRGHRLLGGVT 209
Query: 277 AFPPQHYS---YSSIYM--NGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQ 331
+H+ M + + + V + T E+ L + G + +D ++ HQ
Sbjct: 210 RAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGA 269
Query: 332 RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGL 391
A+ L + E+V + GN AS+P+ L A G +KPG +A G G+GL
Sbjct: 270 AHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGL 329
|
Length = 338 |
| >gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 3e-18
Identities = 71/291 (24%), Positives = 108/291 (37%), Gaps = 40/291 (13%)
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITA-AC 177
LA EAA AL A + P D+D +++ TST + LG + + Y++ C
Sbjct: 88 LAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGC 147
Query: 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDR-----GSCILFGDAAGAVLVQ 232
S + L A + VLV+ + S + D G+ LFGD A AVL+
Sbjct: 148 SAGAIALDLAKDLLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNA-LFGDGAAAVLLS 206
Query: 233 ACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNG 292
D R L ++ T L + + + + G
Sbjct: 207 NDPR------------DRRRERPLFELVRAAST--LLPDSEDAMGW--------HLGEEG 244
Query: 293 KEVF--RFAVRVVPQTIESALEKA------GLTMSSIDWLLLHQANQRIIDAVANRLDVP 344
R R+V + +E L K GL + D +H + ++DAV L +
Sbjct: 245 LTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLS 304
Query: 345 ---MERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLT 392
+E L YGN S++S+ L G+VK G FG G T
Sbjct: 305 PEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFT 355
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. Length = 361 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 3e-17
Identities = 73/293 (24%), Positives = 108/293 (36%), Gaps = 61/293 (20%)
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGAT-QIPKALGCKNNPLAYDITAAC 177
L EAA +A+ A ++ + V++ T+ F GA Q+ LG P AY + AC
Sbjct: 10 LGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP-AYSVNQAC 68
Query: 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
+ L L A ++ G VL G + +FGD A A +V+ SE
Sbjct: 69 ATGLTALALAVQQVQNGKADIVLAGGSEE-------------FVFGDGAAAAVVE---SE 112
Query: 238 DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFR 297
+ L G H A I G++ ++G+ + R
Sbjct: 113 EHAL---------RRGAHPQAEIVSTAAT-FDGASMVPA-------------VSGEGLAR 149
Query: 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRL-----DVPMERVISNL 352
ALE AGLT S ID++ H I DAV L V V + L
Sbjct: 150 --------AARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATL 201
Query: 353 ANYGNTSAASIPLALDEAVRSGKVK-------PGHTIAAAGFGAGLTWGSAIL 398
G+ A+ LDE + + + T+ GFG G T + +L
Sbjct: 202 IMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|235866 PRK06816, PRK06816, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 4e-16
Identities = 72/311 (23%), Positives = 121/311 (38%), Gaps = 65/311 (20%)
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMC-TSTPEDLFGG-ATQIPKALGCKNNPLAYDITAA 176
+A EA L A + D++L L C TS P+ L G A+ + LG +
Sbjct: 66 MAAEAIRDLLDDAGFSLGDIEL-LACGTSQPDQLMPGHASMVHGELGAPPIEVV-SSAGV 123
Query: 177 CSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF------------TDWTDRGSCILF-- 222
C+ ++ L A ++ G RN + + SR+ + I F
Sbjct: 124 CAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEK 183
Query: 223 -------GDAAGAVLVQACDSEDDGLISFDV-------HSDGEGGRHLNACIKGNQTNDA 268
D AGAVL++ D +S + ++ L C+ +
Sbjct: 184 DFLRWMLSDGAGAVLLENKPRPDG--LSLRIDWIDLRSYAG-----ELPVCMYAGAEKNE 236
Query: 269 LGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR---------VVPQTIES---ALEKAGL 316
GS +PP+ +S +++ +V TI+ ++K L
Sbjct: 237 DGSLKGWSDYPPEEAEAASA---------LSLKQDVRLLNENIVVYTIKPLLELVDKRNL 287
Query: 317 TMSSIDWLLLHQANQRIIDAVANRLD-----VPMERVISNLANYGNTSAASIPLALDEAV 371
ID+ L H +++ + + L +P E+ +NLA GNT +ASI + LDE +
Sbjct: 288 DPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELL 347
Query: 372 RSGKVKPGHTI 382
SG++KPG I
Sbjct: 348 NSGRLKPGQKI 358
|
Length = 378 |
| >gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 3e-14
Identities = 80/320 (25%), Positives = 117/320 (36%), Gaps = 72/320 (22%)
Query: 114 ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI 173
E L V+A RAL + + PED+D V+ TST G AT A L+ D
Sbjct: 74 EEAVPLGVDALRRALDGSPLRPEDIDAVVTVTST-----GLATPSLDARIVGELGLSPDT 128
Query: 174 T------AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS---RFTDWTDRG--SCILF 222
C+ GL A + R NVLV+ + S F D T LF
Sbjct: 129 RRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTYVFADDTKSNLVGTALF 188
Query: 223 GDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQH 282
GD A AV+V D EG R L I
Sbjct: 189 GDGAAAVVVSG-----------DRR--AEGKRPLRPDILD-------------------- 215
Query: 283 YSYSSIYMNGKEVFRFAV----------RVVPQTIES--------ALEKAGLTMSSIDWL 324
S+S++Y + +++ + V R +P IES L GL++ I+
Sbjct: 216 -SFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAW 274
Query: 325 LLHQANQRIIDAVANRLDVP---MERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHT 381
++H ++IDA L + +E L YGN S+A++ L++ ++ K G
Sbjct: 275 VVHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKAP-KSGSR 333
Query: 382 IAAAGFGAGLTWGSAILRWG 401
G G +L W
Sbjct: 334 GLMFAMGPGFCSELVLLDWE 353
|
Length = 356 |
| >gnl|CDD|129831 TIGR00748, HMG_CoA_syn_Arc, hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 6e-12
Identities = 76/329 (23%), Positives = 130/329 (39%), Gaps = 43/329 (13%)
Query: 70 LVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQ 129
+VG G+ +P +I +++A++ E IS + + V E + VEAA AL+
Sbjct: 4 IVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALK 63
Query: 130 MAEVNPEDVDLVLMCT-STPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188
A+++P+D+ V + + S P + AT + +A+G + A D+ AC G+ +
Sbjct: 64 RAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACM 123
Query: 189 CHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHS 248
+ G + L IG D T G + + AG ++ +
Sbjct: 124 GLVASGMIKYGLAIGAD-----TAQGAPGDALEYTAGAGGA-------------AYII-- 163
Query: 249 DGEGGRHLNACIKGN-----QTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303
G ++ A +G T D G + Y G+ + V
Sbjct: 164 ---GEKNTVAYFEGTYSYTTDTPDFWRREG-------EPYPRHGGRFTGEPAY---FHHV 210
Query: 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLAN--YGNTSAA 361
+ +EK GLT D+ + HQ N + A L P E+V L GNT +
Sbjct: 211 VTAAKGLMEKLGLTPEDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSG 270
Query: 362 SIPLALDEAVRSGKVKPGHTIAAAGFGAG 390
+ P+ L + +PG I A +G+G
Sbjct: 271 ATPVGLSAVLDI--AEPGDRILAVSYGSG 297
|
This family of archaeal proteins shows considerable homology and identical active site residues to the bacterial hydroxymethylglutaryl-CoA synthase (HMG-CoA synthase, modeled by TIGR01835) which is the second step in the mevalonate pathway of IPP biosynthesis. An enzyme from Pseudomonas fluorescens involved in the biosynthesis of the polyketide diacetyl-phloroglucinol is more closely related, but lacks the active site residues. In each of the genomes containing a member of this family there is no other recognized HMG-CoA synthase, although other elements of the mevalonate pathway are in evidence. The only archaeon currently sequenced which lacks a homolog in this pathway is Halobacterium, which _does_ contain a separate HMG-CoA synthase. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 345 |
| >gnl|CDD|235266 PRK04262, PRK04262, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 71 VGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQM 130
VG G+ +P +I +++A++ E I G+ + V E +AVEAA AL+
Sbjct: 6 VGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKR 65
Query: 131 AEVNPEDVDLVLMCT-STPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189
A ++P+++ V + + S P + AT + +ALG + A D+ AC L +A
Sbjct: 66 AGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMG 125
Query: 190 HIRGGGFRNVLVIGGDA 206
++ G + L IG D
Sbjct: 126 LVKSGMIKYALAIGADT 142
|
Length = 347 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAAC 177
LA EAA AL A + P D+D V++ + I + LG P A + AA
Sbjct: 19 LAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKP-ATRVEAAG 77
Query: 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTD 215
+ + +AA I G VLV+G + +S +
Sbjct: 78 ASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDE 115
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|235266 PRK04262, PRK04262, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 311 LEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL--ANYGNTSAASIPLA-- 366
+EK GL S D+ + HQ N + VA L E+V L GNT + S L
Sbjct: 219 MEKLGLKPSDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLA 278
Query: 367 --LDEAVRSGKVKPGHTIAAAGFGAG 390
LD A KPG I FG+G
Sbjct: 279 AVLDVA------KPGDRILVVSFGSG 298
|
Length = 347 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 7e-06
Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 13/119 (10%)
Query: 100 VRTGIRNRRVLSGKESLTGLAVEAASRALQMA-------EVNPEDVDLVLM--CTSTPED 150
RT G SL LA EA AL A +V+ DVD V++ E
Sbjct: 10 GRTPFGKF----GDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQ 65
Query: 151 LFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR 209
A Q A G + A + AC+ L + AA I G VL G + +S
Sbjct: 66 GQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSD 124
|
Length = 392 |
| >gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 54/307 (17%)
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNP---LAYDITA 175
L EAA++A++ + ++ CT++ D+ G Q+ K LG K + + Y
Sbjct: 105 LGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGC 164
Query: 176 ACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSC----------ILFGDA 225
G +L L G VLV+ S T T RG LFGD
Sbjct: 165 FAGGTVLRLAKDLAENNAGS--RVLVV----CSEITAVTFRGPSDTHLDSLVGQALFGDG 218
Query: 226 AGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSY 285
A AV++ A D + R L + QT S+G++ H
Sbjct: 219 AAAVIIGA-------------DPDTKIERPLFEIVSAAQT-ILPDSDGAI----DGHLRE 260
Query: 286 SSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDW----LLLHQANQRIIDAVANRL 341
+ + + + ++ + IE +L +A + DW + H I+D V +L
Sbjct: 261 VGLTFH---LLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKL 317
Query: 342 DVPMERVISN---LANYGNTSAASIPLALDE----AVRSGKVKPGHTIAAA---GFGAGL 391
D+ E++ + L++YGN S+A + LDE ++ GK G + GFG GL
Sbjct: 318 DLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGL 377
Query: 392 TWGSAIL 398
T + +L
Sbjct: 378 TVETVVL 384
|
Length = 393 |
| >gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
Query: 301 RVVPQTIES--------ALEKAGLT-MSSIDWLLLHQANQRIIDAVANRLDVPMERVISN 351
+ VPQ I A + G++ +SI W+ H I+D V +L + E++ ++
Sbjct: 32 KDVPQLISKNIEKCLVEAFDPLGISDWNSIFWIA-HPGGPAILDQVEAKLGLKPEKLRAS 90
Query: 352 ---LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAG--------FGAGLTWGSAILR 399
L+ YGN S+A + LDE +R +K G + G FG GLT + +LR
Sbjct: 91 RHVLSEYGNMSSACVLFILDE-MRKKSLKKGKSTTGEGLEWGVLFGFGPGLTVETVVLR 148
|
This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. Length = 151 |
| >gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 0.001
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 302 VVPQTIESALEKAGLTMSSIDW----LLLHQANQRIIDAVANRLDVPMERVISN---LAN 354
++ + IE +LE+A + D+ + H I+D V ++ + ER+ + L+
Sbjct: 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSE 337
Query: 355 YGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWG 394
YGN S+A + LDE +R + G GF G+ +G
Sbjct: 338 YGNMSSACVLFILDE-MRKRSAEDGQATTGEGFDWGVLFG 376
|
Length = 401 |
| >gnl|CDD|181378 PRK08313, PRK08313, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 115 SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQ----IPKALGCKNNPLA 170
S+ GL EA RAL A + +D+D V++ P D F G + ALG PL
Sbjct: 23 SMAGLVREAIDRALADAGLTWDDIDAVVV-GKAP-DFFEGVMMPELFLADALGATGKPLI 80
Query: 171 YDITAACSGFLLGLVSAACHIRGGGFRNVLVI 202
TA G +V AA ++ G +R VL +
Sbjct: 81 RVHTAGSVGGSTAVV-AASLVQSGVYRRVLAV 111
|
Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 401 | |||
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 100.0 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 100.0 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 100.0 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 100.0 | |
| PRK06840 | 339 | hypothetical protein; Validated | 100.0 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 100.0 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 100.0 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 100.0 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 100.0 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 100.0 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 100.0 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 100.0 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 100.0 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 100.0 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 100.0 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 100.0 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 100.0 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 100.0 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 100.0 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 100.0 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 100.0 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 100.0 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.97 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.97 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.94 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 99.92 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.9 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 99.9 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 99.88 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.86 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.83 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.83 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.82 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.82 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.81 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.8 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.8 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 99.79 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.79 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.79 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 99.78 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.78 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.78 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.78 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.78 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.78 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.76 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.75 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.74 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.74 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.73 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.73 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.73 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.72 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.72 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.72 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.72 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.72 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.71 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.71 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.7 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.7 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.7 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.7 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.69 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 99.69 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.68 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.68 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.68 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.68 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.68 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.67 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.66 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.66 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.66 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.66 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.66 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.65 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.65 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 99.65 | |
| PRK06158 | 384 | thiolase; Provisional | 99.65 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.64 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.64 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.64 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.63 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.63 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.62 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.61 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.6 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.6 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.59 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.54 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.53 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.49 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.44 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.44 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.44 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.41 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.35 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.25 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 99.23 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 99.2 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.17 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.16 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.15 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 99.14 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.76 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 98.76 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 98.63 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 98.37 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 98.14 | |
| PF08540 | 282 | HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s | 97.43 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 96.78 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 96.42 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 95.8 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 95.07 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 94.92 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 94.26 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 93.96 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 93.81 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 93.6 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 93.48 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 93.34 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 93.13 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 93.05 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 92.38 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 92.3 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 91.97 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 91.91 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 91.86 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.79 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 91.66 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 91.44 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 91.37 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 91.34 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 91.28 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 91.16 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.47 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 90.39 | |
| PRK06840 | 339 | hypothetical protein; Validated | 89.29 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 89.27 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 89.18 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 88.75 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 88.55 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 88.41 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 88.4 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 88.25 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 88.24 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 88.19 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 88.19 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 88.16 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 88.09 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 87.97 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 87.85 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 87.84 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 87.84 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 87.45 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 87.27 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 87.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 86.85 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 86.68 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 86.65 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 86.57 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 86.48 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 86.15 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 86.15 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 85.91 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 85.86 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 85.84 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 85.53 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 85.26 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 84.94 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 84.88 | |
| PRK06158 | 384 | thiolase; Provisional | 84.7 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 84.51 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 84.26 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 83.98 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 83.22 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 83.07 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 82.95 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 82.9 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 82.12 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 81.43 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 81.36 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 81.01 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 80.79 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 80.49 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 80.27 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 80.11 |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-73 Score=542.45 Aligned_cols=321 Identities=51% Similarity=0.887 Sum_probs=298.0
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
++++|.|+|+|+|++.++|+|+++.+++++|||..++||++||++.++|...+|+.+|+++||+++|++|+|||+||++|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT 81 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT 81 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCc-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLFG-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
++|++.+| .|+.||.+||+. ++.+||++.+|+||++||.+|.++|++|.+++||||++|.+|++++|+||.++++|||
T Consensus 82 ~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld~~dR~t~vlFgD 160 (323)
T COG0332 82 STPDHLFPSTACLVQARLGLG-GAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGD 160 (323)
T ss_pred CCcccCCChHHHHHHHHhCCC-CcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCCHhhccceEEEcC
Confidence 99999864 699999999995 6999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+ ...+++.+++++||...+.+..+...... ......+..+.|+|+++|+++++.++
T Consensus 161 GAgAvvl~~~~-~~~~i~~~~l~sdg~~~~~l~~~~~~~~~-------------~~~~~~~~~~~m~Gr~vfk~av~~~~ 226 (323)
T COG0332 161 GAGAVVLEATE-DDNGILDTDLGSDGSQGDLLYLPGGGSAT-------------PKEESGGGLLVMDGREVFKFAVRAMP 226 (323)
T ss_pred CceEEEEecCC-CCcCeeeeeeeccccCCCeeeccCCCCcc-------------ccccccccceeeccHHHHHHHHHHHH
Confidence 99999999976 46789999999999877655543221110 00011134689999999999999999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++++|+++|++++|||||++||+|.++++.++++|++|++|+..++++||||++||+|++|++++++|++|+||++++
T Consensus 227 ~~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill 306 (323)
T COG0332 227 KAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLL 306 (323)
T ss_pred HHHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeehhhhheeeEEEeC
Q 015758 385 AGFGAGLTWGSAILRWG 401 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~~ 401 (401)
.+||.|+|||++++||+
T Consensus 307 ~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 307 EAFGGGLTWGAALVRWG 323 (323)
T ss_pred EeecCcceeeeEEEEeC
Confidence 99999999999999996
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-64 Score=500.63 Aligned_cols=371 Identities=70% Similarity=1.123 Sum_probs=323.7
Q ss_pred cccccccCccceeeeeecc--cCCCccccCccCCCcccccCCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcc
Q 015758 28 SGFCFSQGTFRRVLCSSTI--AGSEKSVSSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIR 105 (401)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~ 105 (401)
|..|-+.+..+++.|++.. +|+.+ .+.+..+.||-+.++++|.|+|+|+|+++++|+|+.+.++..++||.+++||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~ 85 (379)
T PLN02326 7 PVACASSRFAKRVRCSSVTTVDGASR-PSASKYRRPRRVGSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIR 85 (379)
T ss_pred cccccccccccceeeeeeeecccccc-CCcccccCcccccCCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcc
Confidence 3456677788999997766 44444 57788899999999999999999999999999999999888889999999999
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHH
Q 015758 106 NRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLV 185 (401)
Q Consensus 106 ~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~ 185 (401)
+|+++.++++..+|+.+|+++||+++|++++|||+||++|+++++.++.+.+|+++||++ +++++|++++|+|++.||.
T Consensus 86 ~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~~~Ca~~~~aL~ 164 (379)
T PLN02326 86 NRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLTAACSGFVLGLV 164 (379)
T ss_pred eEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeeccccchHHHHHHH
Confidence 999999999999999999999999999999999999999999888777899999999995 7899999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCc
Q 015758 186 SAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQT 265 (401)
Q Consensus 186 ~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~ 265 (401)
+|.++|++|.++++|||++|.++++++|.|+.+..+|||||+|+||++++..+.+++.+.+.++|..++.+..+..+...
T Consensus 165 ~A~~~l~~g~~~~vLVv~~e~~s~~~~~~d~~~~~lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~ 244 (379)
T PLN02326 165 TAARFIRGGGYKNVLVIGADALSRYVDWTDRGTCILFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDD 244 (379)
T ss_pred HHHHHHHcCCCCEEEEEEechhcCCCCccccCceEEEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcc
Confidence 99999999999999999999999999998888778999999999999865433578888888888777666655433211
Q ss_pred ccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCc
Q 015758 266 NDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPM 345 (401)
Q Consensus 266 ~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~ 345 (401)
...........+++.....+..+.|+|+++|+++.+.++++++++|+++|++++|||+|++||+|.++++.+.++||+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ 324 (379)
T PLN02326 245 DSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPP 324 (379)
T ss_pred cccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCH
Confidence 00000001111223223345568899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 346 ERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 346 e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
||+..++++||||++||+|++|+++++++++++||+|++++||+|++|+++++||
T Consensus 325 ek~~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 325 EKVISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHeeecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9998899999999999999999999999999999999999999999999999998
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-59 Score=455.87 Aligned_cols=326 Identities=47% Similarity=0.874 Sum_probs=288.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.|+|+|+|+++|+|+|+++.++..++||.+++||++|++..++++..+|+.+|++++|+++|++|++||.||++|
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s 80 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILAT 80 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 57899999999999999999999999887889999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccce
Q 015758 146 STPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDA 225 (401)
Q Consensus 146 ~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDG 225 (401)
+++++.++.+.++++.||++ +.++++++++|+|++.+|.+|.++|++|.++++||+++|.+|+.+++.++.+..+||||
T Consensus 81 ~~~~~~~~~~~~v~~~Lg~~-~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~~~~~~~~~~~fgDg 159 (326)
T CHL00203 81 STPDDLFGSASQLQAEIGAT-RAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWIDWSDRKTCILFGDG 159 (326)
T ss_pred CCCCCCCchHHHHHHHhCCC-CCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcCCcccCCceEEEcce
Confidence 88887777788999999995 68899999999999999999999999999999999999999999999887777899999
Q ss_pred eEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHH
Q 015758 226 AGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305 (401)
Q Consensus 226 AaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~ 305 (401)
|+|+||++.+ ..+++.+.+.++|....++..+..+... ...+.. ..|. ..+..++|+|+++|++..+.+++
T Consensus 160 a~A~ll~~~~--~~~~~~~~~~t~g~~~~~~~~~~~~~~~---~~~~~~--~~~~--~~~~~~~~~g~~~~~~~~~~~~~ 230 (326)
T CHL00203 160 AGAAIIGASY--ENSILGFKLCTDGKLNSHLQLMNKPVNN---QSFGTT--KLPQ--GQYQSISMNGKEVYKFAVFQVPA 230 (326)
T ss_pred eeEEEEEEcC--CCCeEEEEEEEcCCCcceEEecCCCCCc---cccccc--cccc--CCcceEEECCHHHHHHHHHHHHH
Confidence 9999999865 3567788888888655554432211100 000000 1222 12345889999999998899999
Q ss_pred HHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEE
Q 015758 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAA 385 (401)
Q Consensus 306 ~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~ 385 (401)
+++++|+++|++++|||+|++||+|.++++.++++||+|+||+..++++|||+++|++|++|++++++|++++||+++++
T Consensus 231 ~i~~~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~ 310 (326)
T CHL00203 231 VIIKCLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLS 310 (326)
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeehhhhheeeEEEeC
Q 015758 386 GFGAGLTWGSAILRWG 401 (401)
Q Consensus 386 ~~G~G~s~~a~llr~~ 401 (401)
+||+|++|+++++||.
T Consensus 311 ~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 311 GFGAGLTWGAIVLKWK 326 (326)
T ss_pred EEchhhhheEEEEEeC
Confidence 9999999999999995
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-59 Score=453.67 Aligned_cols=321 Identities=35% Similarity=0.549 Sum_probs=282.9
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEec
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTS 146 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 146 (401)
+++|.++|+|+|+++++|+|+.+.++..++|+.+++||++||++.++++..+|+++|+++||+++|+++++||+||++|+
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~ 82 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATS 82 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 57999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccce
Q 015758 147 TPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDA 225 (401)
Q Consensus 147 ~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDG 225 (401)
+|++.+ +.+.+|+++||++ ++.+||++++|+|++.||++|.++|+++ .+++|||++|.+++.+++.++.+..+||||
T Consensus 83 ~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~~l~~~-~~~aLVv~~d~~s~~~~~~~~~~~~lfGDg 160 (326)
T PRK05963 83 TPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADGFVRAQ-GKPVLVVAANILSRRINMAERASAVLFADA 160 (326)
T ss_pred CCCCCCCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHHHHHcC-CCeEEEEEechhhccCCccccCceEEEeec
Confidence 998765 5789999999995 6899999999999999999999999987 499999999999988888888777899999
Q ss_pred eEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCC-CCCcccEEE-chHHHHHHHHHHH
Q 015758 226 AGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQ-HYSYSSIYM-NGKEVFRFAVRVV 303 (401)
Q Consensus 226 AaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~-~~~~~~~~m-~g~~v~~~~~~~~ 303 (401)
|+|+||++++....+++...+.+++..++.+..+.+ |....+... .....++.| +|+++|+++.+.+
T Consensus 161 A~A~ll~~~~~~~~~~l~~~~~t~~~~~~~~~~~~g-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (326)
T PRK05963 161 AGAVVLAPSAKANSGVLGSQLISDGSHYDLIKIPAG-----------GSARPFAPERDASEFLMTMQDGRAVFTEAVRMM 229 (326)
T ss_pred ceEEEEEecCCCCCceEEEEEEEcCCCCCeEEeCCC-----------CcCCCCcccccccccceEecCCHHHHHHHHHHH
Confidence 999999986543457888888888765554443322 110000000 011112444 7889999999999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIA 383 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~il 383 (401)
+++++++|+++|++++|||+|++||+|.++++.+.++||++++|+..++++|||++++|+|++|+++++++++++||+|+
T Consensus 230 ~~~~~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vl 309 (326)
T PRK05963 230 SGASQNVLASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANLEQPLREGERLL 309 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeehhhhheeeEEEe
Q 015758 384 AAGFGAGLTWGSAILRW 400 (401)
Q Consensus 384 l~~~G~G~s~~a~llr~ 400 (401)
+++||+|++|+++++||
T Consensus 310 l~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 310 FAAAGAGMTGGAVVMRV 326 (326)
T ss_pred EEEEehhhhheeeEEeC
Confidence 99999999999999998
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-58 Score=451.49 Aligned_cols=327 Identities=26% Similarity=0.446 Sum_probs=274.5
Q ss_pred CCeEEEEEEEEcCCCccChHHHH-hhhCCc---hhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEE
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLA-KIVDTS---DEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLV 141 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~-~~~~~~---~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~l 141 (401)
++++|.|+|+|+|+++++|+++. +.++.. .+++.+.+||++||++.++++..+|+++|+++||+++|++++|||+|
T Consensus 6 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~l 85 (353)
T PRK12880 6 DKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDAL 85 (353)
T ss_pred cccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 56899999999999999999754 444321 13467789999999998899999999999999999999999999999
Q ss_pred EEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccc
Q 015758 142 LMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCI 220 (401)
Q Consensus 142 i~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~ 220 (401)
|++|++|++.. +.+.+|+++||+++++.+|||+.+|+||+.||++|.+++++|..+ +|||++|.+|++++|.|+.+..
T Consensus 86 I~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~~~~~d~~~~~ 164 (353)
T PRK12880 86 IVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKFIHPKNMNLAP 164 (353)
T ss_pred EEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhccCCcccCCcee
Confidence 99999998876 579999999999767899999999999999999999999999988 9999999999999998887788
Q ss_pred cccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccc-cCCCCcccccCCCCCCcccEEEchHHHHHHH
Q 015758 221 LFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDA-LGSNGSVLAFPPQHYSYSSIYMNGKEVFRFA 299 (401)
Q Consensus 221 lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~-~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~ 299 (401)
+|||||+|+||++.+. +.++ +.+.+++..++.+..+.+....... ....+.. ..+........+.|+|+++|+++
T Consensus 165 lFGDGAaA~vl~~~~~-~~~~--~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~v~~~~ 240 (353)
T PRK12880 165 IFGDGVSATLIEKTDF-NEAF--FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSL-MQTEEFRQLENLYMDGANIFNMA 240 (353)
T ss_pred eecccceEEEEEecCC-CCce--EEEEecCCCCCeEEecCCCcCCCcccccccccc-ccccccccCceEEEcCHHHHHHH
Confidence 9999999999997542 2233 5677888777666655332110000 0000100 00111112235789999999999
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh-cccccCccccChHHHHHHHHHHcCCCCC
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS-NLANYGNTSAASIPLALDEAVRSGKVKP 378 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~-~l~~~Gn~~sasi~~~L~~~l~~g~~~~ 378 (401)
.+.++++++++|+++|++.+|||+|++||+|.++++.+.++||++++|+.. ++++|||++++|+|++|++++++++++
T Consensus 241 ~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~~~~~~~~- 319 (353)
T PRK12880 241 LECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFK- 319 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHHHHcCCcE-
Confidence 999999999999999999999999999999999999999999999999974 689999999999999999999987764
Q ss_pred CCEEEEEeeehhhhheeeEEEeC
Q 015758 379 GHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 379 Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
+++++||+|+|||++++|||
T Consensus 320 ---~ll~~~G~G~s~g~~ll~~~ 339 (353)
T PRK12880 320 ---ASLSAFGAGLSWGSAVLNFK 339 (353)
T ss_pred ---EEEEEEchhhhheEeEEEEC
Confidence 89999999999999999996
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-57 Score=440.48 Aligned_cols=326 Identities=27% Similarity=0.453 Sum_probs=283.0
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEE
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMC 144 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 144 (401)
+++++|.++|+|+|+++++|+|+.+..+...+|+.+++||++||+.. +++..+|+.+|++++|+++|++|+|||+||++
T Consensus 2 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 80 (329)
T PRK07204 2 KRYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICA 80 (329)
T ss_pred CCCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 45789999999999999999999998888889999999999999987 88999999999999999999999999999999
Q ss_pred ecCCCCC-CchHHHHHHHcCCCC-CCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccc
Q 015758 145 TSTPEDL-FGGATQIPKALGCKN-NPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILF 222 (401)
Q Consensus 145 t~~~~~~-~~~a~~i~~~lGl~~-~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lf 222 (401)
|+++++. +..+.+|+++||+++ .+++++++++|+|++.||.+|.++|++|.+++||||++|.++..+++.++.+.++|
T Consensus 81 ~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lf 160 (329)
T PRK07204 81 SGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGLNWGQNESCILF 160 (329)
T ss_pred CCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCCCcccCcceEEE
Confidence 9988775 457999999999964 36999999999999999999999999999999999999999988888776677899
Q ss_pred cceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHH
Q 015758 223 GDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302 (401)
Q Consensus 223 GDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~ 302 (401)
||||+|+||++++. ..+++...+.+++.+.+....+......+. .. .+..... ...+.|+|+++++++.+.
T Consensus 161 GDGAaA~ll~~~~~-~~~il~~~~~t~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (329)
T PRK07204 161 GDGAAAVVITKGDH-SSRILASHMETYSSGAHLSEIRGGGTMIHP-----RE--YSEERKE-DFLFDMNGRAIFKLSSKY 231 (329)
T ss_pred ecccEEEEEEEcCC-CCcEEEEEEEEecCCCCceEEecCCcCCCC-----cc--ccccccc-CceEEECCHHHHHHHHHH
Confidence 99999999998653 456777777777655443322211100000 00 0111111 124778999999999999
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEE
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTI 382 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~i 382 (401)
++++++++|+++|++++|||||++||+|.++++.+.++|++|+|++..++++|||++++|+|++|+++++++++++||+|
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~v 311 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKI 311 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeehhhhheeeEEEe
Q 015758 383 AAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 383 ll~~~G~G~s~~a~llr~ 400 (401)
++++||+|++|++++|||
T Consensus 312 ll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 312 LLLGTSAGLSIGGILLEY 329 (329)
T ss_pred EEEEEchhhhheeeEEeC
Confidence 999999999999999997
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-56 Score=434.33 Aligned_cols=321 Identities=47% Similarity=0.820 Sum_probs=285.4
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++++++|+.+.++...+++.+++||++||+..++++..+|+.+|++++|+++|+++++||+||+++
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~ 82 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVAT 82 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999988888889999999999999988999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|++.||++ ++++++++++|+|++.||.+|.++|++|..++|||+++|.++..+++.++....+|||
T Consensus 83 ~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~~~GD 161 (325)
T PRK12879 83 TTPDYLFPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVTDYTDRTTCILFGD 161 (325)
T ss_pred CCCCCCCChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcCCccccCceEEEee
Confidence 9887665 4689999999995 5889999999999999999999999999999999999999998888877777789999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCC-CCCcccEEEchHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQ-HYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~-~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
||+|+||++++. ..+++...+.+++...+.+..+.. |. .++.. ......+.++|+++++++.+.+
T Consensus 162 gAaA~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (325)
T PRK12879 162 GAGAVVLEATEN-EPGFIDYVLGTDGDGGDILYRTGL-----------GT--TMDRDALSGDGYIVQNGREVFKWAVRTM 227 (325)
T ss_pred cceEEEEEecCC-CCCeEEEEEEEcCCCCCeEEEcCC-----------CC--CCCccccccCccEEEcCHHHHHHHHHHH
Confidence 999999998653 457777777777766555443211 11 01111 1112347789999999999999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIA 383 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~il 383 (401)
+++++++|+++|++++|||+|++||+|.++++.+.++||++++++..++++|||++++|+|++|+++++++++++||+++
T Consensus 228 ~~~i~~~L~~~g~~~~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vl 307 (325)
T PRK12879 228 PKGARQVLEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLL 307 (325)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred EEeeehhhhheeeEEEeC
Q 015758 384 AAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 384 l~~~G~G~s~~a~llr~~ 401 (401)
+++||+|++|+++++||+
T Consensus 308 l~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 308 LYGFGAGLTWAALLVKWG 325 (325)
T ss_pred EEEEchhhhhEEEEEEeC
Confidence 999999999999999996
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-54 Score=417.16 Aligned_cols=317 Identities=44% Similarity=0.779 Sum_probs=282.5
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|.++|.++|+|+|+++++++++.+.++..++++.+++||++|++..++++..+|+.+|++++|+++|++|++||.|++++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~ 80 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVAT 80 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 56899999999999999999999998887888989999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.++++.||++ +.++++++++|++++.+|..|.++|++|..+++||+++|.++..++|.++....+|||
T Consensus 81 ~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~~~~~~~~~~~~GD 159 (318)
T TIGR00747 81 TTPDHAFPSAACMVQAYLGIK-GIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGD 159 (318)
T ss_pred CCCCCCCChHHHHHHHHhCCC-CCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcCCcCCCCeEEEEec
Confidence 9887654 4689999999995 5889999999999999999999999999999999999999998888887766779999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+. ..++..+.+.+++...+.+..+.... + ......++.+++.++++...+.++
T Consensus 160 GAaA~lL~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~ 222 (318)
T TIGR00747 160 GAGAVVLGESED-PGGIISTHLGADGTQGEALYLPAGGR---------------P-TSGPSPFITMEGNEVFKHAVRKMG 222 (318)
T ss_pred ceeEEEEeecCC-CCcEEEEEEEEcCCCcceEEECCCCc---------------C-CCCCCCceEECCHHHHHHHHHHHH
Confidence 999999998653 23577778888776555443322110 0 001122467789999998889999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++++|+++|++++|||||++||++.++++.+++.||+|++|+..++++|||++++|+|++|+++++++++++||+|++
T Consensus 223 ~~~~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll 302 (318)
T TIGR00747 223 DVVEETLEANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLL 302 (318)
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeehhhhheeeEEEe
Q 015758 385 AGFGAGLTWGSAILRW 400 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~ 400 (401)
+++|+|++|+++++||
T Consensus 303 ~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 303 VAFGGGLTWGAALVRF 318 (318)
T ss_pred EEEehhheeeEEEEEC
Confidence 9999999999999999
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-53 Score=418.51 Aligned_cols=322 Identities=24% Similarity=0.399 Sum_probs=273.1
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++++|+++.+..+...+++.+++||++||++.++++..+|+.+|++++|+++|++|++||+||+++
T Consensus 3 ~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~ 82 (339)
T PRK06840 3 MNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIG 82 (339)
T ss_pred CceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 68999999999999999999999999888899999999999999988899999999999999999999999999999876
Q ss_pred c-CCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHc-CCCCeEEEEEeccCCCCCCCCCCCccc--
Q 015758 146 S-TPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRG-GGFRNVLVIGGDALSRFTDWTDRGSCI-- 220 (401)
Q Consensus 146 ~-~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~-g~~~~vLvv~~d~~s~~~~~~dr~~~~-- 220 (401)
+ .+++.. +.+.+|+++||++ ++++++++++|++++.||.+|.++|++ |..+++|||++|..++.+++.++.+..
T Consensus 83 ~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~~~~~~~~~~~~ 161 (339)
T PRK06840 83 SEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLVDYDNPRTRFMF 161 (339)
T ss_pred cCCCCCCCCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeecccccccCcCCCCeeeec
Confidence 5 455544 5689999999995 689999999999999999999999999 889999999999999888886665543
Q ss_pred cccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCccccc-CCC-CCCcccEEEchHHHHHH
Q 015758 221 LFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAF-PPQ-HYSYSSIYMNGKEVFRF 298 (401)
Q Consensus 221 lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~-p~~-~~~~~~~~m~g~~v~~~ 298 (401)
.|||||+|+||++++. ..+++...+.+++..++.+..+.. |....+ +.. .....++.+++.+.++.
T Consensus 162 ~~GDgAaA~ll~~~~~-~~~il~~~~~t~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (339)
T PRK06840 162 NFAAGGSAALLKKDAG-KNRILGSAIITDGSFSEDVRVPAG-----------GTKQPASPETVENRQHYLDVIDPESMKE 229 (339)
T ss_pred cCCCceeEEEEEecCC-CCceEEEEEEEcCCccceEEecCC-----------CcCCCCcccccccccceEEEcCcHHHHH
Confidence 4799999999998653 456777777788765554433221 111000 000 11112355666666653
Q ss_pred H-----HHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHc
Q 015758 299 A-----VRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 299 ~-----~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
. +..++++++++|+++|++++|||+|++||.|.++++.++++||++++|+. ++++||||+++|+|++|++++++
T Consensus 230 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~-~~~~~Gn~~sas~~~~L~~~~~~ 308 (339)
T PRK06840 230 RLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQAI-YLDEYGHLGQLDQILSLHLALEQ 308 (339)
T ss_pred HhHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHeE-eHHhccchhhhhHHHHHHHHHHc
Confidence 3 34678999999999999999999999999999999999999999999985 68999999999999999999999
Q ss_pred CCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 374 GKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 374 g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
+++++||++++++||+|++|+++++||+
T Consensus 309 ~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 309 GKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred CCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 9999999999999999999999999996
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-53 Score=410.27 Aligned_cols=317 Identities=50% Similarity=0.851 Sum_probs=282.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
+.++|.++|+|+|+++++++++.+..+..++++.+++||++|+++.++++..+|+.+|++++|+++|+++++||.|++++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~ 81 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVAT 81 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 56899999999999999999999998887888999999999999988999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
++++... ..+.+|+..+|+ .++++++++++|++++.||..|.++|++|.++++||+++|.+++.+++.++....+|||
T Consensus 82 ~~~~~~~~~~~~~i~~~lG~-~~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~gD 160 (319)
T PRK09352 82 TTPDYAFPSTACLVQARLGA-KNAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVDWTDRSTCVLFGD 160 (319)
T ss_pred CCCCCCCchHHHHHHHHhCC-CCCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhccccCcccCCceEEEec
Confidence 9887644 468899999999 56899999999999999999999999999999999999999998888877766779999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++++. .+++.+++.+++...+.+..+... .. .|.. ..++++++++++++..+.++
T Consensus 161 GaaA~ll~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~---~~~~~~~~~~~~~~~~~~~~ 222 (319)
T PRK09352 161 GAGAVVLGASEE--PGILSTHLGSDGSYGDLLYLPGGG-----------SR--GPAS---PGYLRMEGREVFKFAVRELA 222 (319)
T ss_pred cceEEEEEEcCC--CCeEEEEEEEcCCCCCeEEeCCCC-----------CC--CCCC---CCceEECCHHHHHHHHHHHH
Confidence 999999998653 267788888887655544332111 00 1110 22578889999999889999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++++|+++|++++|||+|++||+|.++++.+++.||+|++++..++.+|||++++|++++|++++++|++++||++++
T Consensus 223 ~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll 302 (319)
T PRK09352 223 KVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLL 302 (319)
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred EeeehhhhheeeEEEeC
Q 015758 385 AGFGAGLTWGSAILRWG 401 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~~ 401 (401)
++||+|++|+++++||+
T Consensus 303 ~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 303 EGFGGGLTWGAALVRWP 319 (319)
T ss_pred EEEchhheeEEEEEEeC
Confidence 99999999999999996
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-53 Score=412.45 Aligned_cols=319 Identities=52% Similarity=0.857 Sum_probs=281.8
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEec
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTS 146 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 146 (401)
+++|.++|+|+|+++++++|+.+.++.+.+++.+++||++||++.++++..+|+.+|++++|+++|+++++||+||++++
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 47999999999999999999999988888899999999999999888999999999999999999999999999999999
Q ss_pred CCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccce
Q 015758 147 TPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDA 225 (401)
Q Consensus 147 ~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDG 225 (401)
++++.. ..+.+|+++||++ ++++++++++|++++.+|.+|.++|++|..+++||+++|.++..++|.++....+||||
T Consensus 81 ~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~GDg 159 (320)
T cd00830 81 TPDYLFPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDG 159 (320)
T ss_pred CCCCCCCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhccccCcccCCceEEEecc
Confidence 887654 5789999999995 78999999999999999999999999999999999999999988888777667899999
Q ss_pred eEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHH
Q 015758 226 AGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305 (401)
Q Consensus 226 AaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~ 305 (401)
|+|+||++.+. ..+++.+...+++...+.+..+..+ ....+........++.|+++++++...+.+++
T Consensus 160 AaA~ll~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (320)
T cd00830 160 AGAVVLEATEE-DPGILDSVLGSDGSGADLLTIPAGG-----------SRSPFEDAEGGDPYLVMDGREVFKFAVRLMPE 227 (320)
T ss_pred ceEEEEEecCC-CCcEEEEEEEEcCCCCCeEEeCCCC-----------cCCccccccccCccEEEcChHHHHHHHHhhHH
Confidence 99999998653 4578888888887655544332211 10001011112235778899999998899999
Q ss_pred HHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEE
Q 015758 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAA 385 (401)
Q Consensus 306 ~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~ 385 (401)
+++++|+++|++++|||+|++||++.++++.+.+.||+++||+..++++|||++++|+|++|+++++++++++||+++++
T Consensus 228 ~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~ 307 (320)
T cd00830 228 SIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLL 307 (320)
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeehhhhheeeEE
Q 015758 386 GFGAGLTWGSAIL 398 (401)
Q Consensus 386 ~~G~G~s~~a~ll 398 (401)
++|+|++|+++++
T Consensus 308 ~~G~G~~~~~~l~ 320 (320)
T cd00830 308 GFGAGLTWGAALL 320 (320)
T ss_pred EEchHHhhHHhhC
Confidence 9999999999875
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-53 Score=422.32 Aligned_cols=316 Identities=21% Similarity=0.240 Sum_probs=257.4
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhC----Cchh-------hhhhhcCcceeEecCC----------------------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVD----TSDE-------WISVRTGIRNRRVLSG---------------------- 112 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~----~~~~-------~i~~~~Gi~~R~~~~~---------------------- 112 (401)
.+++|.|+|+++|++.++|+|+.+.+. ..++ +|.+++||++||++.+
T Consensus 20 ~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 99 (391)
T PLN03169 20 GKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRL 99 (391)
T ss_pred CCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHHH
Confidence 458999999999999999999998532 1233 3556799999999752
Q ss_pred ---CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCC-eeEeeCccChHHHHHHHHHH
Q 015758 113 ---KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNP-LAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 113 ---~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~-~~~~i~~~C~~~~~aL~~A~ 188 (401)
+|+..+|+++|+++||+++|++|+|||+||++|++....++.+.+|+++||+++.. .+++++.||+|++.||.+|.
T Consensus 100 ~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~ 179 (391)
T PLN03169 100 DIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAK 179 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHH
Confidence 45689999999999999999999999999999986444456799999999997555 37999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCCC------CCCCCccccccceeEEEEEeeccCC--CCCeeEEEEeecCCCCCceeeec
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFTD------WTDRGSCILFGDAAGAVLVQACDSE--DDGLISFDVHSDGEGGRHLNACI 260 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~~------~~dr~~~~lfGDGAaAvll~~~~~~--~~gl~~~~~~s~g~~~~~l~~~~ 260 (401)
.++++++.++||||++|.++..++ +.|+.+..+|||||+|+||+.++.. ..++ +.++.++. .. .+.
T Consensus 180 ~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~--~~l~~~~~--~~--ip~ 253 (391)
T PLN03169 180 DIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPF--FELHTAIQ--QF--LPG 253 (391)
T ss_pred HHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcc--eEEEeeee--eE--cCC
Confidence 999999999999999999886554 3455567899999999999975421 1233 24444332 11 111
Q ss_pred cCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcC--EEEecccCHHHHHHHH
Q 015758 261 KGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSID--WLLLHQANQRIIDAVA 338 (401)
Q Consensus 261 ~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId--~~i~Hq~~~~i~~~i~ 338 (401)
.+ ..+ .+...... +..++|+++++++.+.++++++++|+++|++++||| +|++||+|.+|++.++
T Consensus 254 --~~--~~~-------~~~~~~~g--~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~ 320 (391)
T PLN03169 254 --TE--KTI-------DGRLTEEG--INFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLE 320 (391)
T ss_pred --Cc--ccc-------CceecCCc--eEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHH
Confidence 10 000 01001111 234678999999999999999999999999999999 9999999999999999
Q ss_pred HHcCCCchhhh---hcccccCccccChHHHHHHHHHHcCCCC---CCCEEEEEeeehhhhheeeEEEe
Q 015758 339 NRLDVPMERVI---SNLANYGNTSAASIPLALDEAVRSGKVK---PGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 339 ~~lgl~~e~~~---~~l~~~Gn~~sasi~~~L~~~l~~g~~~---~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
++||++++++. .++++||||+|+|+|++|++++++++++ +||++++++||+|+||+++++||
T Consensus 321 ~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 321 KKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred HHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHHHHHhh
Confidence 99999999997 5899999999999999999999888776 69999999999999999999998
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=412.60 Aligned_cols=310 Identities=22% Similarity=0.363 Sum_probs=265.4
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhC-------CchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCC
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVD-------TSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDV 138 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~-------~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~I 138 (401)
.+++|.|+|+|+|+++++|+++.+.+. .+.+++.+.+||++|++..++++..+|+.+|++++|+++|+++++|
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~I 83 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDI 83 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 358999999999999999999998643 3567888999999999998899999999999999999999999999
Q ss_pred CEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCC---
Q 015758 139 DLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWT--- 214 (401)
Q Consensus 139 d~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~--- 214 (401)
|+|+++|+++++.. +.+.+|+++||+++++++++|+++|+|++.||++|.++|++|.+++|||+++|.++.++++.
T Consensus 84 d~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~ 163 (338)
T PRK09258 84 GLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVEATIDR 163 (338)
T ss_pred CEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhccchhhh
Confidence 99999999887665 56899999999965689999999999999999999999999999999999999998776532
Q ss_pred ---CCC---------ccccccceeEEEEEeeccCCC--CCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCC
Q 015758 215 ---DRG---------SCILFGDAAGAVLVQACDSED--DGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPP 280 (401)
Q Consensus 215 ---dr~---------~~~lfGDGAaAvll~~~~~~~--~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~ 280 (401)
+.. ...+|||||+|+||++.+... .+++.....++++..+ ... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-------~~- 222 (338)
T PRK09258 164 LLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEHHE-------------LCQ-------GG- 222 (338)
T ss_pred hccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCccc-------------ccc-------cC-
Confidence 221 136899999999999864211 2233322222221100 000 00
Q ss_pred CCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCcccc
Q 015758 281 QHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSA 360 (401)
Q Consensus 281 ~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~s 360 (401)
...+.++++++++...+.++++++++|+++|++++|||+|++||+|.++++.+++.||+|++|++.++++||||++
T Consensus 223 ----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~s 298 (338)
T PRK09258 223 ----RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHTRAILKALGIDPEKVFTTFPTLGNMGP 298 (338)
T ss_pred ----ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHHHHHHHHhCCCHHHceehHhhhCCcHH
Confidence 1236788999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 361 asi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+|+|++|++++++|++++||++++++||+|++|+++++||
T Consensus 299 as~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 299 ASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred hHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 9999999999999999999999999999999999999998
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=409.29 Aligned_cols=330 Identities=24% Similarity=0.338 Sum_probs=264.0
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCC-------chhhhhhhcCcceeEecCC-----CCCHHHHHHHHHHHHHHhCCC
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDT-------SDEWISVRTGIRNRRVLSG-----KESLTGLAVEAASRALQMAEV 133 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~-------~~~~i~~~~Gi~~R~~~~~-----~e~~~~la~~Aa~~aL~~agi 133 (401)
|+++|.|+|+|+|+++++|+++.++++. ..+||.+++||++||++.+ +++..+|+.+|+++||+++|+
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999887753 2368999999999999753 257899999999999999999
Q ss_pred CcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCC
Q 015758 134 NPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTD 212 (401)
Q Consensus 134 ~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~ 212 (401)
+|+|||+||++|+++++.. +.+.+|+++||++ ++++++++.+|+|++.||.+|.++|++|..+++|||++|.+|+.++
T Consensus 81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~ 159 (378)
T PRK06816 81 SLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFR 159 (378)
T ss_pred CHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhh
Confidence 9999999999999987654 4578999999995 5789999999999999999999999999999999999999998776
Q ss_pred CCC------------CCc---------cccccceeEEEEEeeccCCCCCe-eEEEEeecCCCCCceeeeccCCCcccccC
Q 015758 213 WTD------------RGS---------CILFGDAAGAVLVQACDSEDDGL-ISFDVHSDGEGGRHLNACIKGNQTNDALG 270 (401)
Q Consensus 213 ~~d------------r~~---------~~lfGDGAaAvll~~~~~~~~gl-~~~~~~s~g~~~~~l~~~~~~~~~~~~~~ 270 (401)
+.+ +.. .++|||||+|+||++.+. ..|+ +.+....++....+....+..... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~-~~g~~l~~~~~~~~~~~~~~~~~~~~g~~---~~ 235 (378)
T PRK06816 160 ASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPR-PDGLSLRIDWIDLRSYAGELPVCMYAGAE---KN 235 (378)
T ss_pred hhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCC-CCCceEEEEEEeeecccccCccceecCCc---cC
Confidence 422 111 247999999999997543 2353 333332222221111111110000 00
Q ss_pred CCC---cccccCCC---CCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHc---
Q 015758 271 SNG---SVLAFPPQ---HYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRL--- 341 (401)
Q Consensus 271 ~~G---~~~~~p~~---~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~l--- 341 (401)
.++ .|..++.. ......++|+++.+++++...+++.++++|+++|++++|||+|++||+|.++++.+.++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~ 315 (378)
T PRK06816 236 EDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKA 315 (378)
T ss_pred CCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhc
Confidence 000 00000100 012234678899999988888899999999999999999999999999999999999987
Q ss_pred --CCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehh-hhheeeEEEe
Q 015758 342 --DVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAG-LTWGSAILRW 400 (401)
Q Consensus 342 --gl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G-~s~~a~llr~ 400 (401)
|+|++|++.++++||||++||+|++|++++++|++++||+|++++.|+| +++|.++|.|
T Consensus 316 ~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s~~~~~~~~~~~~ 377 (378)
T PRK06816 316 GFMIPEEKWFTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPESGRFSTAFMLLTV 377 (378)
T ss_pred cCCCChhheEEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecccchhheeEEEEE
Confidence 9999999999999999999999999999999999999999999977766 9999999998
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-51 Score=404.84 Aligned_cols=315 Identities=24% Similarity=0.306 Sum_probs=258.2
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhC--Cch----------hhhhhhcCcceeEecCC--CC-------------------
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVD--TSD----------EWISVRTGIRNRRVLSG--KE------------------- 114 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~--~~~----------~~i~~~~Gi~~R~~~~~--~e------------------- 114 (401)
++|.|+|+|+|++.++|+++.+++. ..+ +||.+++||++||+..+ ++
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 5899999999999999999999874 222 78889999999999875 33
Q ss_pred --CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHH
Q 015758 115 --SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHI 191 (401)
Q Consensus 115 --~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l 191 (401)
+..+|+.+|++++|+++|++|++||+||++|+++...++.+.+|+++||+++++.+||++ ++|+|++.||++|.+++
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~ 161 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLL 161 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHH
Confidence 589999999999999999999999999999998855567799999999997568999998 89999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCCCCCC-CC---ccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCccc
Q 015758 192 RGGGFRNVLVIGGDALSRFTDWTD-RG---SCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTND 267 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~~~~~d-r~---~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~ 267 (401)
++|+.++||||++|.+|.++++.| +. +..+|||||+|+||++++.. .++....+..++.....+ +..
T Consensus 162 ~~~~~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~--p~~------ 232 (361)
T cd00831 162 EANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRD-RRRERPLFELVRAASTLL--PDS------ 232 (361)
T ss_pred HHCCCCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCc-ccccccceeeecccceee--ecC------
Confidence 999999999999999998887766 43 35789999999999986532 111111111112111111 100
Q ss_pred ccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHc--CCCcCCcCEEEecccCHHHHHHHHHHcCCCc
Q 015758 268 ALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKA--GLTMSSIDWLLLHQANQRIIDAVANRLDVPM 345 (401)
Q Consensus 268 ~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~a--gl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~ 345 (401)
+....+......+ .+ +.++++++++.+.++++++++|+++ |++.+|||+|++||+|.++++.++++||+++
T Consensus 233 -----~~~~~~~~~~~~~-~~-~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~i~~~v~~~lgl~~ 305 (361)
T cd00831 233 -----EDAMGWHLGEEGL-TF-VLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSP 305 (361)
T ss_pred -----CCceEEEEEcceE-EE-EeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECCCChHHHHHHHHHcCCCH
Confidence 0000011001111 12 2356888888899999999999999 9999999999999999999999999999999
Q ss_pred hhhh---hcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEE
Q 015758 346 ERVI---SNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 346 e~~~---~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~ll 398 (401)
+++. .++++||||+++|+|++|+++++++++++||+|++++||+|++|+++++
T Consensus 306 ~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 306 EDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 9985 6899999999999999999999999999999999999999999999985
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=404.05 Aligned_cols=314 Identities=22% Similarity=0.273 Sum_probs=243.7
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh-C--Cch---------hhhhhhcCcceeEecCCC--------------------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV-D--TSD---------EWISVRTGIRNRRVLSGK-------------------- 113 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~-~--~~~---------~~i~~~~Gi~~R~~~~~~-------------------- 113 (401)
-+++|.|+|+|+|+++++|+++.+++ . ..+ +||.+++||++||++.++
T Consensus 21 ~~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 100 (399)
T PLN03171 21 GLAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDAR 100 (399)
T ss_pred CCcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHH
Confidence 34899999999999999999999873 1 222 369999999999998765
Q ss_pred -----CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCC-eeEeeCccChHHHHHHHHH
Q 015758 114 -----ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNP-LAYDITAACSGFLLGLVSA 187 (401)
Q Consensus 114 -----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~-~~~~i~~~C~~~~~aL~~A 187 (401)
++..+|+++|+++||+++|++++|||+||++|+++++.++.+.+|+++||++... ..+++.+||+|++.+|.+|
T Consensus 101 ~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A 180 (399)
T PLN03171 101 LDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLA 180 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHH
Confidence 3799999999999999999999999999999999988667899999999996443 2567778999999999999
Q ss_pred HHHHHcCCCCeEEEEEeccCCCCCCCCCCCc------cccccceeEEEEEeeccCC-CCCeeEE---EEeecCCCCCcee
Q 015758 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGS------CILFGDAAGAVLVQACDSE-DDGLISF---DVHSDGEGGRHLN 257 (401)
Q Consensus 188 ~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~------~~lfGDGAaAvll~~~~~~-~~gl~~~---~~~s~g~~~~~l~ 257 (401)
.++++++++++||||++|.+|+++++.|+.. ..+|||||+|+||++.+.. +.+++.+ ....++...+.+.
T Consensus 181 ~~li~~~~~~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 260 (399)
T PLN03171 181 KDLAENNRGARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESDDAIN 260 (399)
T ss_pred HHHHHhCCCCeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEEecCCchheE
Confidence 9999999999999999999999998877652 5699999999999986531 1232221 1111111101110
Q ss_pred eeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHH-----cCCCcCCcCEEEecccCHH
Q 015758 258 ACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEK-----AGLTMSSIDWLLLHQANQR 332 (401)
Q Consensus 258 ~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~-----agl~~~dId~~i~Hq~~~~ 332 (401)
. .++.... ..+...+.+.+...+.+.++++++|++ +|++.+||+|+ +||+|.+
T Consensus 261 ~------------------~~~~~g~---~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~ 318 (399)
T PLN03171 261 M------------------HFTEGGL---DGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSA 318 (399)
T ss_pred E------------------EEEcCCc---eEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHH
Confidence 0 0011000 011111333333333334444444432 58889999987 5999999
Q ss_pred HHHHHHHHcCCCchhhh---hcccccCccccChHHHHHHHHHHcCC--CCCC---CEEEEEeeehhhhheeeEEEeC
Q 015758 333 IIDAVANRLDVPMERVI---SNLANYGNTSAASIPLALDEAVRSGK--VKPG---HTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 333 i~~~i~~~lgl~~e~~~---~~l~~~Gn~~sasi~~~L~~~l~~g~--~~~G---d~ill~~~G~G~s~~a~llr~~ 401 (401)
+++.+.++||++++|+. .++.+||||+++|+|++|++++++++ +++| |++++++||+|+||++++++|.
T Consensus 319 il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~ 395 (399)
T PLN03171 319 ILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTVDAMLLHAS 395 (399)
T ss_pred HHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHHHHHHhhcc
Confidence 99999999999999997 57999999999999999999998774 6788 9999999999999999999983
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-50 Score=392.96 Aligned_cols=302 Identities=24% Similarity=0.341 Sum_probs=248.5
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecC
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTST 147 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~ 147 (401)
++|.|+|+|+|+++++|+++.+.++.+++|+.+++||++|+++.++++..+|+++|+++||+++|+++++||+|+++|++
T Consensus 2 ~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~ 81 (345)
T TIGR00748 2 AGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSES 81 (345)
T ss_pred ccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC
Confidence 58999999999999999999999988899999999999999999999999999999999999999999999999999988
Q ss_pred CCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCcccccccee
Q 015758 148 PEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 226 (401)
Q Consensus 148 ~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGA 226 (401)
+++.+ +.+..+++.||++++.+++|++++|+|++.+|.+|.++|++|.++++|||++|.++. ++.++. .+.|||||
T Consensus 82 ~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~--~~~~~~-~~~~GDGA 158 (345)
T TIGR00748 82 HPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG--APGDAL-EYTAGAGG 158 (345)
T ss_pred CCccccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc--CCCccC-cccCCCce
Confidence 87765 568899999999656889999999999999999999999999999999999999863 333443 35789999
Q ss_pred EEEEEeeccCCCCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEch-HHHHHHHHHHHH
Q 015758 227 GAVLVQACDSEDDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNG-KEVFRFAVRVVP 304 (401)
Q Consensus 227 aAvll~~~~~~~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g-~~v~~~~~~~~~ 304 (401)
+|+||++.+. ...+.. ....+++. ..+...+. .++... .++.+ .+++++ +.
T Consensus 159 aA~vl~~~~~-~~~~~~~~~~~~d~~---------------~~~~~~~~--~~~~~~-----~~~~~~~~~~~~----~~ 211 (345)
T TIGR00748 159 AAYIIGEKNT-VAYFEGTYSYTTDTP---------------DFWRREGE--PYPRHG-----GRFTGEPAYFHH----VV 211 (345)
T ss_pred EEEEEccCCc-ceEeecccceecccc---------------cccccCCC--cCCCcC-----CeecChHHHHHH----HH
Confidence 9999996431 111100 00111110 00111111 011111 11222 345554 34
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcc--cccCccccChHHHHHHHHHHcCCCCCCCEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL--ANYGNTSAASIPLALDEAVRSGKVKPGHTI 382 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l--~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~i 382 (401)
++++++|+++|++++|||+|++||+|.++++.+.+.||+|++|+..++ ++||||++||+|++|+++++ ++++||+|
T Consensus 212 ~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~v 289 (345)
T TIGR00748 212 TAAKGLMEKLGLTPEDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRI 289 (345)
T ss_pred HHHHHHHHHcCCCHHHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH--hcCCCCEE
Confidence 788999999999999999999999999999999999999999998754 79999999999999999987 68999999
Q ss_pred EEEeeehhhhheeeEEEeC
Q 015758 383 AAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 383 ll~~~G~G~s~~a~llr~~ 401 (401)
++++||+|++|+++++||+
T Consensus 290 ll~~~G~G~s~~~~~~~~~ 308 (345)
T TIGR00748 290 LAVSYGSGAGSDAFSIVVQ 308 (345)
T ss_pred EEEEecCCcceeEEEEEEc
Confidence 9999999999999999994
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-49 Score=392.22 Aligned_cols=317 Identities=22% Similarity=0.258 Sum_probs=251.1
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhC----C--c------hhhhhhhcCcceeEecCCC---------------------
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVD----T--S------DEWISVRTGIRNRRVLSGK--------------------- 113 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~----~--~------~~~i~~~~Gi~~R~~~~~~--------------------- 113 (401)
+..|.|+|+++|++.++++|+.+++. . . ..+|.+++||++||...++
T Consensus 16 ~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (393)
T PLN03172 16 PATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQ 95 (393)
T ss_pred CeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHH
Confidence 47899999999999999999988652 1 1 1235678999999996421
Q ss_pred ----CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCee-EeeCccChHHHHHHHHHH
Q 015758 114 ----ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLA-YDITAACSGFLLGLVSAA 188 (401)
Q Consensus 114 ----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~-~~i~~~C~~~~~aL~~A~ 188 (401)
+...+|+++|+++||+++|++++|||+||++|+|+.+.++.+.+|+++||+++...+ ++++.||+|++.||.+|.
T Consensus 96 ~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~ 175 (393)
T PLN03172 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAK 175 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHH
Confidence 013599999999999999999999999999999997767789999999999765544 688999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCC-CCCCCCC-----CccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccC
Q 015758 189 CHIRGGGFRNVLVIGGDALSR-FTDWTDR-----GSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKG 262 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~-~~~~~dr-----~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~ 262 (401)
.++++++.++||||++|.+|. +.++.|+ .+..+|||||+|+||++++..+..-..+++...+ ... .+..+
T Consensus 176 ~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~--~~~--~~~t~ 251 (393)
T PLN03172 176 DLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAA--QTI--LPDSD 251 (393)
T ss_pred HHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeec--cEE--ecCCc
Confidence 999999999999999999995 5566664 2467999999999999754211000112222111 000 01111
Q ss_pred CCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcC
Q 015758 263 NQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLD 342 (401)
Q Consensus 263 ~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lg 342 (401)
....+.+...| + .+.+. +++++++.+.+++.++++|+++|++..|||+|++||+|.++++.++++||
T Consensus 252 ~~~~~~i~~~G-----------~-~~~l~-~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lg 318 (393)
T PLN03172 252 GAIDGHLREVG-----------L-TFHLL-KDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLD 318 (393)
T ss_pred ccccceEEcCC-----------c-EEEEe-chHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHHHHHHcC
Confidence 11101111111 1 13333 78999999999999999999999999999999999999999999999999
Q ss_pred CCchhhh---hcccccCccccChHHHHHHHHH----HcCCCCCC---CEEEEEeeehhhhheeeEEEe
Q 015758 343 VPMERVI---SNLANYGNTSAASIPLALDEAV----RSGKVKPG---HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 343 l~~e~~~---~~l~~~Gn~~sasi~~~L~~~l----~~g~~~~G---d~ill~~~G~G~s~~a~llr~ 400 (401)
++++++. .++++||||+|+|+|++|++++ +++++++| +++++++||+|+||++++|||
T Consensus 319 l~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 319 LKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred CCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 9999997 4699999999999999999987 35777777 889999999999999999999
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-49 Score=391.99 Aligned_cols=316 Identities=29% Similarity=0.435 Sum_probs=258.2
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhC------------------------CchhhhhhhcCcceeEecCCC---------
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVD------------------------TSDEWISVRTGIRNRRVLSGK--------- 113 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~------------------------~~~~~i~~~~Gi~~R~~~~~~--------- 113 (401)
+++|.|+|+|+|+++++|+|+.+.++ ...+||.+++||++||+...+
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR 81 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence 57999999999999999999987642 136789999999999997531
Q ss_pred ---------C--CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHH
Q 015758 114 ---------E--SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFL 181 (401)
Q Consensus 114 ---------e--~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~ 181 (401)
+ ...+|+.+|+++||+++|+++++||.|+++++++++.+ +.+..|++.||++ .++++++.+|+|++
T Consensus 82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~ 159 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACSSAT 159 (372)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhHHHH
Confidence 1 34689999999999999999999999999998877655 4689999999994 68999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccceeEEEEEeeccCCC--C--CeeEEEEeecCCCCCcee
Q 015758 182 LGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSED--D--GLISFDVHSDGEGGRHLN 257 (401)
Q Consensus 182 ~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAaAvll~~~~~~~--~--gl~~~~~~s~g~~~~~l~ 257 (401)
.||..|.++|++|.+++|||+++|.++.++++.|+.+.++|||||+|+||++.+... . .++.....++. .+.+.
T Consensus 160 ~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~--~~~~~ 237 (372)
T PRK07515 160 FGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQF--SNNIR 237 (372)
T ss_pred HHHHHHHHHHHcCCCCEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeeccc--cccee
Confidence 999999999999999999999999999888888877778999999999999865321 1 24444433321 12221
Q ss_pred eeccCCCcccccCCCCcccc-cCCC-CCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH
Q 015758 258 ACIKGNQTNDALGSNGSVLA-FPPQ-HYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID 335 (401)
Q Consensus 258 ~~~~~~~~~~~~~~~G~~~~-~p~~-~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~ 335 (401)
.+. |.... .+.. ......+.|+|..+|+++.+.++++|+++|+++|++++|||+|++||+|.++++
T Consensus 238 ~~~------------G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~~d 305 (372)
T PRK07515 238 NNF------------GFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANINMNQ 305 (372)
T ss_pred cCC------------CCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHH
Confidence 110 10000 0000 011124788999999999999999999999999999999999999999999999
Q ss_pred HHHHH-cC--CCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 336 AVANR-LD--VPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 336 ~i~~~-lg--l~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
.+.++ || +++++.+.++++||||++||+|++|+++. +++++||++++++||+|++|++++||-
T Consensus 306 ~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 306 LIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred HHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHHHHhcc
Confidence 99988 55 55677777899999999999999999984 468999999999999999999999873
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-49 Score=393.89 Aligned_cols=315 Identities=21% Similarity=0.259 Sum_probs=254.5
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCC-------c-----hhhhhhhcCcceeEecCCC---------------------
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDT-------S-----DEWISVRTGIRNRRVLSGK--------------------- 113 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~-------~-----~~~i~~~~Gi~~R~~~~~~--------------------- 113 (401)
+.+|.++|+.+|++.++++++.+++.. . -.+|.+++||++||...++
T Consensus 20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 99 (401)
T PLN03170 20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQ 99 (401)
T ss_pred CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHH
Confidence 378999999999999999999886521 1 1235578999999996421
Q ss_pred ----CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCC-eeEeeCccChHHHHHHHHHH
Q 015758 114 ----ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNP-LAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 114 ----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~-~~~~i~~~C~~~~~aL~~A~ 188 (401)
+...+|+++|+++||+++|++++|||+||++|+++.+.++.+.+|+++||+++.. .+++++.||+|++.||.+|.
T Consensus 100 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~ 179 (401)
T PLN03170 100 DIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAK 179 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHH
Confidence 1146799999999999999999999999999999977778899999999996543 37999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC-CCC-----CCCccccccceeEEEEEeeccCCCCCee--EEEEeecCCCCCceeeec
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT-DWT-----DRGSCILFGDAAGAVLVQACDSEDDGLI--SFDVHSDGEGGRHLNACI 260 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~-~~~-----dr~~~~lfGDGAaAvll~~~~~~~~gl~--~~~~~s~g~~~~~l~~~~ 260 (401)
.++++++.++||||++|.+|.++ ++. ++.+..+|||||+|+||++++. .++. .+++.+++. .+ .+.
T Consensus 180 ~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~--~~~~~~~~~l~~~~~---~~-~p~ 253 (401)
T PLN03170 180 DLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD--ERVERPLFQLVSASQ---TI-LPD 253 (401)
T ss_pred HHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCc--ccccCCceEEeeccc---eE-ecC
Confidence 99999999999999999999776 444 2334679999999999998652 1221 234544321 11 111
Q ss_pred cCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHH
Q 015758 261 KGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANR 340 (401)
Q Consensus 261 ~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~ 340 (401)
. +..++ . .+. ...+ .+.+ .+++++++.+.++++++++|+++|++.+|||+|++||+|.++++.++++
T Consensus 254 ~----~~~~~---~--~i~--~~G~-~~~l-~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~ 320 (401)
T PLN03170 254 S----EGAID---G--HLR--EVGL-TFHL-LKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAK 320 (401)
T ss_pred C----ccccc---c--eEE--cCCe-EEEE-ehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHH
Confidence 1 01110 0 011 0111 2334 5889999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhh---hcccccCccccChHHHHHHHHH----HcCCCCCC---CEEEEEeeehhhhheeeEEEe
Q 015758 341 LDVPMERVI---SNLANYGNTSAASIPLALDEAV----RSGKVKPG---HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 341 lgl~~e~~~---~~l~~~Gn~~sasi~~~L~~~l----~~g~~~~G---d~ill~~~G~G~s~~a~llr~ 400 (401)
||++++++. .++++||||+|+++|++|++++ ++|++++| |++++++||+|+||++++|||
T Consensus 321 Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 321 VGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred cCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHhee
Confidence 999999986 5899999999999999999997 46888888 899999999999999999998
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-49 Score=387.19 Aligned_cols=304 Identities=23% Similarity=0.300 Sum_probs=250.4
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|.++|.++|+|+|+++++|+++.+.++.+++|+.+++||++|+++.++++..+|+.+|+++||+++|++++|||+||++|
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. +.+.+|+++||+++++++++++++|+|++.+|..|.++|++|.++++|||++|... .++.++.. ..|||
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~--~~~~~~~~-~~~GD 157 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQ--GAPGDALE-YTAAA 157 (347)
T ss_pred cCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeec--cCCCCCCC-CcCCC
Confidence 9887654 56889999999965578999999999999999999999999999999999999842 24444432 46899
Q ss_pred eeEEEEEeeccCCCCCeeEEE-EeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEch-HHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFD-VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNG-KEVFRFAVRV 302 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~-~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g-~~v~~~~~~~ 302 (401)
||+|+||++++. ...+.... ...++ . ..+...|. .+|... ..+.+ ..+ .+.
T Consensus 158 GA~A~ll~~~~~-~~~i~~~~~~~~d~--~-------------d~~~~~~~--~~~~~~-----~~~~~~~~~----~~~ 210 (347)
T PRK04262 158 GGAAFIIGKEEV-IAEIEATYSYTTDT--P-------------DFWRREGE--PYPRHG-----GRFTGEPAY----FKH 210 (347)
T ss_pred CcEEEEEecCcc-cceeeccccccccc--h-------------hhcCCCCC--cCCCcC-----ceecchHHH----HHH
Confidence 999999996431 11122110 00111 0 11211121 122211 11112 122 257
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHcCCCCCCC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRSGKVKPGH 380 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd 380 (401)
++++++++|+++|++++|||+|++||+|.++++.+.++||+|++|+.. ++++||||++||+|++|+++++ ++++||
T Consensus 211 ~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd 288 (347)
T PRK04262 211 IISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD--VAKPGD 288 (347)
T ss_pred HHHHHHHHHHHhCcCHHHhceeecCCCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--hCCCCC
Confidence 889999999999999999999999999999999999999999999985 4799999999999999999987 489999
Q ss_pred EEEEEeeehhhhheeeEEEeC
Q 015758 381 TIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 381 ~ill~~~G~G~s~~a~llr~~ 401 (401)
++++++||+|++|.+.++||+
T Consensus 289 ~vll~~~G~G~~~~~~~~~~~ 309 (347)
T PRK04262 289 RILVVSFGSGAGSDAFSITVT 309 (347)
T ss_pred EEEEEecCCCcceeeEEEEec
Confidence 999999999999999999984
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=387.66 Aligned_cols=315 Identities=22% Similarity=0.264 Sum_probs=249.7
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCC------c------hhhhhhhcCcceeEecCCC--------------------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDT------S------DEWISVRTGIRNRRVLSGK-------------------- 113 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~------~------~~~i~~~~Gi~~R~~~~~~-------------------- 113 (401)
-+.+|.++|+.+|++.++++++.+++.. . -.+|.+++||++||..-++
T Consensus 14 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r 93 (389)
T PLN03168 14 GPACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVR 93 (389)
T ss_pred CCeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHH
Confidence 3488999999999999999999886521 1 1236678999999996522
Q ss_pred -----CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCC-eeEeeCccChHHHHHHHHH
Q 015758 114 -----ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNP-LAYDITAACSGFLLGLVSA 187 (401)
Q Consensus 114 -----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~-~~~~i~~~C~~~~~aL~~A 187 (401)
+...+|+.+|+++||+++|++++|||+||++|+|++..++.+.+|+++||+++.. .+++++.||+||+.||.+|
T Consensus 94 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A 173 (389)
T PLN03168 94 HDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVA 173 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHH
Confidence 1357999999999999999999999999999999977667899999999996543 3899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeccCCCCCCCCCC------CccccccceeEEEEEeeccCC--CCCeeEEEEeecCCCCCceeee
Q 015758 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDR------GSCILFGDAAGAVLVQACDSE--DDGLISFDVHSDGEGGRHLNAC 259 (401)
Q Consensus 188 ~~~l~~g~~~~vLvv~~d~~s~~~~~~dr------~~~~lfGDGAaAvll~~~~~~--~~gl~~~~~~s~g~~~~~l~~~ 259 (401)
..++++++.++||||++|.+|..+++.++ .++.+|||||+|+||++++.. ..+++.+... +. ...+
T Consensus 174 ~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~--~~----~~~p 247 (389)
T PLN03168 174 KDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWA--GE----TILP 247 (389)
T ss_pred HHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEee--ee----EEEc
Confidence 99999999999999999999986654221 356899999999999985421 1233332221 10 1111
Q ss_pred ccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHH
Q 015758 260 IKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVAN 339 (401)
Q Consensus 260 ~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~ 339 (401)
..+. .+ +. .+ ....+. +.+ .+++++...+.++++++++|+..|+...|+++|++||+|.+|++.+++
T Consensus 248 ~s~~----~~---~~--~~--~~~g~~-~~l-~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~~v~~ 314 (389)
T PLN03168 248 ESDG----AI---DG--HL--TEAGLI-FHL-MKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEA 314 (389)
T ss_pred CCCC----cc---Cc--eE--ecCceE-EEE-CHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHHHHHH
Confidence 1110 00 00 01 011111 221 257888888999999999999999988889999999999999999999
Q ss_pred HcCCCchhhhh---cccccCccccChHHHHHHHHHHcCCCCCC--------CEEEEEeeehhhhheeeEEEe
Q 015758 340 RLDVPMERVIS---NLANYGNTSAASIPLALDEAVRSGKVKPG--------HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 340 ~lgl~~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~g~~~~G--------d~ill~~~G~G~s~~a~llr~ 400 (401)
+||+++||+.. ++.+||||+|+|+|+.|++++++ ++++| |++++++||+|+||++++|||
T Consensus 315 ~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~ 385 (389)
T PLN03168 315 KLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRA 385 (389)
T ss_pred HcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhhhhhhhee
Confidence 99999999964 79999999999999999998865 55554 899999999999999999999
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=381.16 Aligned_cols=315 Identities=21% Similarity=0.261 Sum_probs=248.2
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhC------Cc------hhhhhhhcCcceeEecCCCC--------------------
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVD------TS------DEWISVRTGIRNRRVLSGKE-------------------- 114 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~------~~------~~~i~~~~Gi~~R~~~~~~e-------------------- 114 (401)
+.+|.++|+.+|++.++++++.+++. .. -.+|.+++||++||..-+++
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ 95 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence 47899999999999999999987652 11 12356789999999864211
Q ss_pred -----CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCe-eEeeCccChHHHHHHHHHH
Q 015758 115 -----SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPL-AYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 115 -----~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~-~~~i~~~C~~~~~aL~~A~ 188 (401)
...+|+++|+++||+++|++++|||+||++|+++...++.+.+|+++||+++... .++++.||+||+.||.+|.
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~ 175 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAK 175 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHH
Confidence 1359999999999999999999999999999999776678999999999975453 5688999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCC-CCCCCCC-----CccccccceeEEEEEeeccCCCCCee--EEEEeecCCCCCceeeec
Q 015758 189 CHIRGGGFRNVLVIGGDALSR-FTDWTDR-----GSCILFGDAAGAVLVQACDSEDDGLI--SFDVHSDGEGGRHLNACI 260 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~-~~~~~dr-----~~~~lfGDGAaAvll~~~~~~~~gl~--~~~~~s~g~~~~~l~~~~ 260 (401)
+++++++.++||||++|.+|. +.++.|+ .+..+|||||+|+||++++. .++. .+++.... ....+.
T Consensus 176 ~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~--~~~~~~~~~l~~~~----~~~~~~ 249 (391)
T PLN03173 176 DLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPV--LGVEKPLFELVSAA----QTILPD 249 (391)
T ss_pred HHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCC--CCcCCcceEEEeee----eEEecC
Confidence 999999999999999999995 5567664 24679999999999997542 2221 12222110 000011
Q ss_pred cCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHH
Q 015758 261 KGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANR 340 (401)
Q Consensus 261 ~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~ 340 (401)
.+....+.+...|. .+.+. +++++++.+.++++++++|+++|++.+|||+|++||+|.++++.++++
T Consensus 250 t~~~~~~~i~~~G~------------~~~l~-~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~~v~~~ 316 (391)
T PLN03173 250 SDGAIDGHLREVGL------------TFHLL-KDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAK 316 (391)
T ss_pred CccceeeEEEcCce------------EEEEe-cHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHHHHHHH
Confidence 10000001111110 12333 789999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhh---cccccCccccChHHHHHHHHHHc----CCCCC--C-CEEEEEeeehhhhheeeEEEe
Q 015758 341 LDVPMERVIS---NLANYGNTSAASIPLALDEAVRS----GKVKP--G-HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 341 lgl~~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~----g~~~~--G-d~ill~~~G~G~s~~a~llr~ 400 (401)
||++++|+.. ++.+||||+|+|+|+.|++++++ +++++ | +++++++||+|+|++++++||
T Consensus 317 LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~ 386 (391)
T PLN03173 317 LALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHS 386 (391)
T ss_pred cCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhh
Confidence 9999999874 69999999999999999999963 44333 3 889999999999999999998
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-46 Score=361.66 Aligned_cols=314 Identities=30% Similarity=0.424 Sum_probs=262.1
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecC
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTST 147 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~ 147 (401)
++|.++|+|+|+++++++++.+.++.. ++...+||++|++..++++..+|+.+|++++|+++|+++++||+||+++++
T Consensus 2 v~I~~i~~~lP~~~v~~~~~~~~~~~~--~~~~~~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~ 79 (324)
T cd00827 2 VGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATES 79 (324)
T ss_pred ccEEEEEecCCceeecHHHHHHHhCCC--cceeeeecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCC
Confidence 689999999999999999999987654 788899999999998889999999999999999999999999999999988
Q ss_pred CCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCcccccccee
Q 015758 148 PEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 226 (401)
Q Consensus 148 ~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGA 226 (401)
++... ..+.+|++.||++ ++++++++++|+|++.||.+|.++|++|.++++||+++|.++...++.++ ...+|||||
T Consensus 80 ~~~~~~~~~~~i~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~~~~~-~~~~~gdga 157 (324)
T cd00827 80 PIDKGKSAATYLAELLGLT-NAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA-LEPTLGDGA 157 (324)
T ss_pred CCCCCccHHHHHHHHcCCC-CCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcccCCCC-ccccccCce
Confidence 76644 5689999999996 79999999999999999999999999999999999999999977653333 457999999
Q ss_pred EEEEEeeccCC-CCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEch--HHHHHHHHHHH
Q 015758 227 GAVLVQACDSE-DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNG--KEVFRFAVRVV 303 (401)
Q Consensus 227 aAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g--~~v~~~~~~~~ 303 (401)
+|+||++.+.. ..++......+++...+... ...+ +.. ..+........+.+++ .++++...+.+
T Consensus 158 aA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (324)
T cd00827 158 AAMLVSRNPGILAAGIVSTHSTSDPGYDFSPY---------PVMD--GGY-PKPCKLAYAIRLTAEPAGRAVFEAAHKLI 225 (324)
T ss_pred EEEEEecCcccccCCceeeeeecccccccCcc---------ceec--cCC-CcchhhhhhcceeecCCccchHHHHhHHH
Confidence 99999986521 24666666666554321000 0000 000 0000001112356666 67888888999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCH-HHHHHHHHHcCCCchhhhh----cccccCccccChHHHHHHHHHHcCCCCC
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQ-RIIDAVANRLDVPMERVIS----NLANYGNTSAASIPLALDEAVRSGKVKP 378 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~-~i~~~i~~~lgl~~e~~~~----~l~~~Gn~~sasi~~~L~~~l~~g~~~~ 378 (401)
+++++++|++.|++ +|||+|++||+|. .+++.++++++++++++.. ++++|||++++++|++|+++++++++++
T Consensus 226 ~~~~~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~ 304 (324)
T cd00827 226 AKVVRKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKA 304 (324)
T ss_pred HHHHHHHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999 9999999999999 9999999999999888874 6999999999999999999999999999
Q ss_pred CCEEEEEeeehhhhheeeEE
Q 015758 379 GHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 379 Gd~ill~~~G~G~s~~a~ll 398 (401)
||++++++||+|++|+++++
T Consensus 305 Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 305 GDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred CCEEEEEEeccchhheeccC
Confidence 99999999999999999863
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=364.30 Aligned_cols=326 Identities=18% Similarity=0.275 Sum_probs=254.8
Q ss_pred CCeEEEEEEEEcCCC--ccChHHHHhhhC---Cch-------hhhhhhcCcceeEecCCC--------------CCHHHH
Q 015758 66 RGCKLVGCGSAVPTL--QISNDDLAKIVD---TSD-------EWISVRTGIRNRRVLSGK--------------ESLTGL 119 (401)
Q Consensus 66 ~~v~I~gig~~lP~~--~v~~~~l~~~~~---~~~-------~~i~~~~Gi~~R~~~~~~--------------e~~~~l 119 (401)
.+|+++...+|-|+. +++.+.+.+... .-+ .++.++.|+.+..+..+. +.....
T Consensus 112 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v 191 (521)
T PLN02854 112 KPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEEARAEAEAV 191 (521)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHHHHHHHHHH
Confidence 369999999999876 688888877542 211 346689999877765431 123455
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHHcCCCC
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFR 197 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~~g~~~ 197 (401)
.-.|++++|+++|++|+|||+||++ +++++. ++.+.+|+++||+++++.+||++ +||+||+.+|++|++++++++.+
T Consensus 192 ~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~ 270 (521)
T PLN02854 192 MFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNS 270 (521)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCC
Confidence 5678899999999999999999975 667754 46799999999997789999998 89999999999999999999999
Q ss_pred eEEEEEeccCCCCCCC---CCCCc---cccccceeEEEEEeeccCCCC-------CeeEEEEeecCCCCCceeeeccCCC
Q 015758 198 NVLVIGGDALSRFTDW---TDRGS---CILFGDAAGAVLVQACDSEDD-------GLISFDVHSDGEGGRHLNACIKGNQ 264 (401)
Q Consensus 198 ~vLvv~~d~~s~~~~~---~dr~~---~~lfGDGAaAvll~~~~~~~~-------gl~~~~~~s~g~~~~~l~~~~~~~~ 264 (401)
+||||++|.+| ++| +||.. ..+|||||+|+||++.+.++. .+....+.+|++..+.+..+..+.
T Consensus 271 ~aLVVstE~~S--~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~- 347 (521)
T PLN02854 271 YAVVVSTENIT--LNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQREDDK- 347 (521)
T ss_pred eEEEEEEeeee--cCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEeccCCC-
Confidence 99999999998 677 77765 679999999999998542111 144556667776655554321100
Q ss_pred cccccCCCCccc--ccCCC--CCCcccEEEchHHHHHHHHH--HHHHHHHHHHHHcCCCc------CCcCEEEecccCHH
Q 015758 265 TNDALGSNGSVL--AFPPQ--HYSYSSIYMNGKEVFRFAVR--VVPQTIESALEKAGLTM------SSIDWLLLHQANQR 332 (401)
Q Consensus 265 ~~~~~~~~G~~~--~~p~~--~~~~~~~~m~g~~v~~~~~~--~~~~~i~~aL~~agl~~------~dId~~i~Hq~~~~ 332 (401)
+..|... +.+.. ......+.|+|+.++.+... .+...+++.|.++|+++ .|||+|++||+|++
T Consensus 348 -----G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~ 422 (521)
T PLN02854 348 -----GTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRA 422 (521)
T ss_pred -----CcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHH
Confidence 0001000 11110 11112466777777666543 25778999999999987 68999999999999
Q ss_pred HHHHHHHHcCCC---chhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 333 IIDAVANRLDVP---MERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 333 i~~~i~~~lgl~---~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+++.+++.||++ .|+...++.+||||+|+|+|+.|+++.++|++++||+|+++|||+|++|+++++||
T Consensus 423 IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~ 493 (521)
T PLN02854 423 VLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKA 493 (521)
T ss_pred HHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEE
Confidence 999999999999 67777899999999999999999999999999999999999999999999999998
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-45 Score=366.46 Aligned_cols=326 Identities=18% Similarity=0.234 Sum_probs=239.5
Q ss_pred CCeEEEEEEEEcCCC--ccChHHHHhhh------CC----c------hhhhhhhcCcceeEecCCCC-------------
Q 015758 66 RGCKLVGCGSAVPTL--QISNDDLAKIV------DT----S------DEWISVRTGIRNRRVLSGKE------------- 114 (401)
Q Consensus 66 ~~v~I~gig~~lP~~--~v~~~~l~~~~------~~----~------~~~i~~~~Gi~~R~~~~~~e------------- 114 (401)
.+|+++...+|-|+. +++.+.+.+.. +. + -+||.+++||.+|++.....
T Consensus 66 ~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~ 145 (478)
T PLN02932 66 KPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSR 145 (478)
T ss_pred CcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHH
Confidence 468999999999876 58888777643 11 1 15788999999999985432
Q ss_pred -CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHH
Q 015758 115 -SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIR 192 (401)
Q Consensus 115 -~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~ 192 (401)
...+|+.+|+++||+++|++|+|||+||++|++++..++.+.+|+++||+++++.+||++ +||+|++.+|.+|.++++
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999985567899999999997789999998 899999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCCCCCC----CccccccceeEEEEEeeccCCCC----Cee---EEEEeecCCCCCceeeecc
Q 015758 193 GGGFRNVLVIGGDALSRFTDWTDR----GSCILFGDAAGAVLVQACDSEDD----GLI---SFDVHSDGEGGRHLNACIK 261 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~~~~~~dr----~~~~lfGDGAaAvll~~~~~~~~----gl~---~~~~~s~g~~~~~l~~~~~ 261 (401)
+++.++||||++|.+|..+++.|+ .+..+|||||+|+||++.+.+.. ++. .....+|+..++.+..+..
T Consensus 226 ~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d 305 (478)
T PLN02932 226 VHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEED 305 (478)
T ss_pred cCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecc
Confidence 999999999999999998888664 35689999999999998542111 233 2333345544444332210
Q ss_pred CCCcccccCCCCccc--ccCCCC-CC-cccEEEchH------HHHHHHHHHHH-HHHHHHHHHcCCCc---CCcCEEEec
Q 015758 262 GNQTNDALGSNGSVL--AFPPQH-YS-YSSIYMNGK------EVFRFAVRVVP-QTIESALEKAGLTM---SSIDWLLLH 327 (401)
Q Consensus 262 ~~~~~~~~~~~G~~~--~~p~~~-~~-~~~~~m~g~------~v~~~~~~~~~-~~i~~aL~~agl~~---~dId~~i~H 327 (401)
+ .|..|..+ +.|... +. ...+.+.|. +.+++....+. +..+... .+..+ ++||+|++|
T Consensus 306 ~------~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~--~~~~~~~~~~id~f~iH 377 (478)
T PLN02932 306 E------DGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKL--KHYIPDFKLAFEHFCIH 377 (478)
T ss_pred c------CCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHh--hcCcHhHHhhhceEEEc
Confidence 0 00001000 011000 00 000111111 11222222111 1111111 12222 479999999
Q ss_pred ccCHHHHHHHHHHcCCCch---hhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEE
Q 015758 328 QANQRIIDAVANRLDVPME---RVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 328 q~~~~i~~~i~~~lgl~~e---~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
|+|+++++.+++.||++++ +...++++||||+|+|+|+.|++..++|++++||+|++++||+|++|+++++|
T Consensus 378 qggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~ 452 (478)
T PLN02932 378 AGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWV 452 (478)
T ss_pred cCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHH
Confidence 9999999999999999994 44789999999999999999999999999999999999999999999998764
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=364.27 Aligned_cols=326 Identities=17% Similarity=0.197 Sum_probs=254.1
Q ss_pred CCeEEEEEEEEcCCC--ccChHHHHhhhC---Cc-h------hhhhhhcCcceeEecCC-------C-------CCHHHH
Q 015758 66 RGCKLVGCGSAVPTL--QISNDDLAKIVD---TS-D------EWISVRTGIRNRRVLSG-------K-------ESLTGL 119 (401)
Q Consensus 66 ~~v~I~gig~~lP~~--~v~~~~l~~~~~---~~-~------~~i~~~~Gi~~R~~~~~-------~-------e~~~~l 119 (401)
.+|+++...+|-|+. +++.+.+.+... .- + .++.++.||.+..+..+ + +...++
T Consensus 96 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~~ea~~l 175 (502)
T PLN02377 96 RPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAREEAEQV 175 (502)
T ss_pred CCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHHHHHHHH
Confidence 468999999999876 688888877542 21 1 34668999977544431 1 346889
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHHcCCCC
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFR 197 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~~g~~~ 197 (401)
+..|+++||+++|++|+|||+||+ |+++++. ++.+.+|+++||+++++.+||++ +||+||+.+|++|.+++++++.+
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~ 254 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNT 254 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999987 7888864 46799999999997789999999 79999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCCc----cccccceeEEEEEeeccCCC----CC---eeEEEEeecCCCCCceeeeccCCCcc
Q 015758 198 NVLVIGGDALSRFTDWTDRGS----CILFGDAAGAVLVQACDSED----DG---LISFDVHSDGEGGRHLNACIKGNQTN 266 (401)
Q Consensus 198 ~vLvv~~d~~s~~~~~~dr~~----~~lfGDGAaAvll~~~~~~~----~g---l~~~~~~s~g~~~~~l~~~~~~~~~~ 266 (401)
+||||++|.+|...++.|+.+ ..+|||||+|+||++.+.+. .+ +......++++..+.+..+..
T Consensus 255 ~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d----- 329 (502)
T PLN02377 255 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQD----- 329 (502)
T ss_pred EEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccc-----
Confidence 999999999999888877765 37999999999999743211 12 455555566654444432210
Q ss_pred cccCCCCcccccCCC------CCCcccEEEchHH-------HHHHHHHHHHHHHHHHHHHcC-CCcCCcCEEEecccCHH
Q 015758 267 DALGSNGSVLAFPPQ------HYSYSSIYMNGKE-------VFRFAVRVVPQTIESALEKAG-LTMSSIDWLLLHQANQR 332 (401)
Q Consensus 267 ~~~~~~G~~~~~p~~------~~~~~~~~m~g~~-------v~~~~~~~~~~~i~~aL~~ag-l~~~dId~~i~Hq~~~~ 332 (401)
..++..+.+..+ ..-..++.|.|+. ++.++...+++.+++.++..+ ...+|||+|++||+|++
T Consensus 330 ---~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~ 406 (502)
T PLN02377 330 ---DAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRA 406 (502)
T ss_pred ---cCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHH
Confidence 011111011000 0001123344443 344666778888888887655 45789999999999999
Q ss_pred HHHHHHHHcCCCc---hhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 333 IIDAVANRLDVPM---ERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 333 i~~~i~~~lgl~~---e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+++.+++.||+++ |+...++++||||+|+|+|+.|+++.++|++++||++++++||+|++|+++++||
T Consensus 407 IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~ 477 (502)
T PLN02377 407 VIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEA 477 (502)
T ss_pred HHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEE
Confidence 9999999999986 6777899999999999999999999999999999999999999999999999998
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-44 Score=358.64 Aligned_cols=319 Identities=18% Similarity=0.270 Sum_probs=241.9
Q ss_pred CCeEEEEEEEEcCCC--ccChHHHHhhhC---Cch-------hhhhhhcCcceeEecCC-------C-------CCHHHH
Q 015758 66 RGCKLVGCGSAVPTL--QISNDDLAKIVD---TSD-------EWISVRTGIRNRRVLSG-------K-------ESLTGL 119 (401)
Q Consensus 66 ~~v~I~gig~~lP~~--~v~~~~l~~~~~---~~~-------~~i~~~~Gi~~R~~~~~-------~-------e~~~~l 119 (401)
.+|+++..++|-|+. +++.+.+.+... .-+ .++.++.|+.+..+..+ + +....+
T Consensus 100 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~Ea~~~ 179 (511)
T PLN02192 100 RPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETV 179 (511)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHHHHHHH
Confidence 369999999999987 588888877542 211 34668999988777643 1 235778
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHHcCCCC
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFR 197 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~~g~~~ 197 (401)
...|+++||+++|++|+|||+||++++ ++... +.+.+|+++||++.++.+||++ +||+||+.||++|.+++++++.+
T Consensus 180 ~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~ 258 (511)
T PLN02192 180 MFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNS 258 (511)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCC
Confidence 889999999999999999999998755 55444 5699999999997689999998 79999999999999999999999
Q ss_pred eEEEEEeccCCCCCCC---CCCCcc---ccccceeEEEEEeeccCCC----CCeeE---EEEeecCCCCCceeeeccCCC
Q 015758 198 NVLVIGGDALSRFTDW---TDRGSC---ILFGDAAGAVLVQACDSED----DGLIS---FDVHSDGEGGRHLNACIKGNQ 264 (401)
Q Consensus 198 ~vLvv~~d~~s~~~~~---~dr~~~---~lfGDGAaAvll~~~~~~~----~gl~~---~~~~s~g~~~~~l~~~~~~~~ 264 (401)
+||||++|.+| ++| +||... .+|||||+|+||++.+.++ .++.. ....+++...+.+..+ ++
T Consensus 259 ~aLVVstE~~S--~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~---ed 333 (511)
T PLN02192 259 YALVISMENIT--LNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQE---ED 333 (511)
T ss_pred eEEEEEEEecc--ccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecc---cc
Confidence 99999999999 566 677655 6999999999999843211 14432 2232333322222111 00
Q ss_pred ccccc---------CCCCcc----------cccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEE
Q 015758 265 TNDAL---------GSNGSV----------LAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLL 325 (401)
Q Consensus 265 ~~~~~---------~~~G~~----------~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i 325 (401)
.+... ...|.. ...|..+.....+.|+|+++|++..+..++.+++ +||+|+
T Consensus 334 ~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~----------~Idhf~ 403 (511)
T PLN02192 334 SAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKL----------AFEHFC 403 (511)
T ss_pred cccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHH----------hhceEe
Confidence 00000 000000 0012112222357789999998766544443332 699999
Q ss_pred ecccCHHHHHHHHHHcCCCc---hhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 326 LHQANQRIIDAVANRLDVPM---ERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 326 ~Hq~~~~i~~~i~~~lgl~~---e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+||+|+++++.+++.||+++ |+...++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|+++++||
T Consensus 404 iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~ 481 (511)
T PLN02192 404 IHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 481 (511)
T ss_pred eccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheee
Confidence 99999999999999999997 6777899999999999999999999999999999999999999999999999998
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-43 Score=347.52 Aligned_cols=302 Identities=19% Similarity=0.164 Sum_probs=246.8
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecC
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTST 147 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~ 147 (401)
|+|.++|.|+|+++++++++++..+.+++|+...+|+++|++..++|+..+|+++|++++|+++ +|++||+|+++|++
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s 78 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES 78 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence 5899999999999999999999999889999999999999999999999999999999999998 89999999999999
Q ss_pred CCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCcccccccee
Q 015758 148 PEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 226 (401)
Q Consensus 148 ~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGA 226 (401)
+++.. +.+.+|++.||++++++++|+.++|+|++.||.+|.++|++|+.++||||++|......+. ....+|||||
T Consensus 79 ~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~~~~---~~~~~~GdGA 155 (379)
T TIGR01835 79 GIDQSKAAAVYVHGLLGLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYGLES---PGEPTQGAGA 155 (379)
T ss_pred CCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcccCC---CCCccccCcc
Confidence 98764 6799999999997678999999999999999999999999999999999999985432111 1235899999
Q ss_pred EEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHH
Q 015758 227 GAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306 (401)
Q Consensus 227 aAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~ 306 (401)
+|+||++++ +++.+...+. .. .. +..+.+...+ . ....++|+..++.+.+.++++
T Consensus 156 ~A~Ll~~~~----~i~~~~~~~~------~~---t~-~~~df~~p~~---------~--~~~~v~g~~s~~~y~~~~~~~ 210 (379)
T TIGR01835 156 VAMLVSADP----KLLAINEDSV------LY---TD-DIMDFWRPNY---------S--TTALVDGQYSNEQYLNAFENA 210 (379)
T ss_pred EEEEEecCC----CeeEEeccce------ee---ec-CCCCccCCCC---------C--CceeECcHHHHHHHHHHHHHH
Confidence 999998642 4544432110 00 00 0001111111 1 124578888888888999999
Q ss_pred HHHHHHHcCCCcCCcCEEEecccCHHHH----HHHHHHcCCCc-hhhh-------hcccccCccccChHHHHHHHHHHcC
Q 015758 307 IESALEKAGLTMSSIDWLLLHQANQRII----DAVANRLDVPM-ERVI-------SNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 307 i~~aL~~agl~~~dId~~i~Hq~~~~i~----~~i~~~lgl~~-e~~~-------~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
++++|+++|++++|||+|++||++.++. +.+.+.++++. +++. .+.++|||++++|+|++|.++++++
T Consensus 211 ~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~ 290 (379)
T TIGR01835 211 WNDYAKRTGLSLADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENA 290 (379)
T ss_pred HHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhc
Confidence 9999999999999999999999987773 34566677773 3333 3578999999999999999999986
Q ss_pred -CCCCCCEEEEEeeehhhhheeeEEE
Q 015758 375 -KVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 -~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
++++||+|++++||+|......-++
T Consensus 291 ~~~~~Gd~ill~s~GsG~~ae~~~~~ 316 (379)
T TIGR01835 291 FEDTTGDKIGLFSYGSGAVAEFFSGT 316 (379)
T ss_pred ccCCCCCEEEEEEecCCcceeeEEEE
Confidence 7899999999999999887655443
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=334.29 Aligned_cols=303 Identities=18% Similarity=0.183 Sum_probs=240.9
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEe--cCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEE
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRV--LSGKESLTGLAVEAASRALQMAEVNPEDVDLVLM 143 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~--~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~ 143 (401)
++++|.++|.|+|+++|+|+|+++.++.+++|+ ++||.+|++ +.++|+..+|+++|++++|+++|++|++||+||+
T Consensus 3 ~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~--~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliv 80 (459)
T PLN02577 3 KNVGILAMEVYFPPTCVQQEALEAHDGVSKGKY--TIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEV 80 (459)
T ss_pred CccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHH--hhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 578999999999999999999999999999997 689999886 4578999999999999999999999999999999
Q ss_pred EecCCCCCC-chHHHHH---HHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCC--CCeEEEEEeccCCCCCCCCCCC
Q 015758 144 CTSTPEDLF-GGATQIP---KALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGG--FRNVLVIGGDALSRFTDWTDRG 217 (401)
Q Consensus 144 ~t~~~~~~~-~~a~~i~---~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~--~~~vLvv~~d~~s~~~~~~dr~ 217 (401)
+|+++++.. +.+.+|+ ++||. +++.+||++++|+||+.||.+|.++|++|. .++||||++|..+....|. +
T Consensus 81 aTeT~~d~~ps~A~~v~~ll~~LG~-~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~-e- 157 (459)
T PLN02577 81 GSETVIDKSKSIKTFLMQLFEESGN-TDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPA-R- 157 (459)
T ss_pred EcCCCCCCCCchHHHHHHHHHHhCC-CCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCC-C-
Confidence 999998765 5677775 67888 579999999999999999999999999986 4999999999988666653 2
Q ss_pred ccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHH
Q 015758 218 SCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFR 297 (401)
Q Consensus 218 ~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~ 297 (401)
..+||||+|+||+.++ ..++ +....|.+..+ ..+.++ +... ..+..|+|+.+++
T Consensus 158 --~t~GdGA~A~lv~~~~---~~~l--~~~~~g~~~~~---------~~Df~r---------P~~~-~~~~~vdG~~s~~ 211 (459)
T PLN02577 158 --PTGGAGAVAMLVGPNA---PIVF--ESKYRGSHMAH---------VYDFYK---------PDLA-SEYPVVDGKLSQT 211 (459)
T ss_pred --CCCCcceEEEEEccCC---Ccee--ecccccccCcc---------cchhcc---------cCCC-CCceEEcchHHHH
Confidence 3569999999998643 2222 21111111111 111121 1111 1247889999999
Q ss_pred HHHHHHHHHHHHHHHHc------CCCcCCcCEEEecccCHHHHHHHHHHcCCC---------------------------
Q 015758 298 FAVRVVPQTIESALEKA------GLTMSSIDWLLLHQANQRIIDAVANRLDVP--------------------------- 344 (401)
Q Consensus 298 ~~~~~~~~~i~~aL~~a------gl~~~dId~~i~Hq~~~~i~~~i~~~lgl~--------------------------- 344 (401)
++++.+++++++.+++. |++.+|||++++||+..++.....++|.+.
T Consensus 212 ~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (459)
T PLN02577 212 CYLMALDSCYKRFCEKYEKLEGKQFSISDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDE 291 (459)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCHHHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhh
Confidence 99999999999999888 889999999999999988877655554311
Q ss_pred -------------------chhhhh---cccccCccccChHHHHHHHHHHcCC-CCCCCEEEEEeeehhhhheeeEEE
Q 015758 345 -------------------MERVIS---NLANYGNTSAASIPLALDEAVRSGK-VKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 345 -------------------~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~g~-~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+|+.. .-++.||++++|+++.|..++++.+ ..+|++|+++++|+|......-++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~ 369 (459)
T PLN02577 292 SYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLR 369 (459)
T ss_pred ccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEE
Confidence 022221 2358999999999999999998653 459999999999999876655443
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=292.88 Aligned_cols=315 Identities=22% Similarity=0.307 Sum_probs=248.0
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCC-----chhh----hhhhcCcceeEecCCC-----------------CCHHHHHH
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDT-----SDEW----ISVRTGIRNRRVLSGK-----------------ESLTGLAV 121 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~-----~~~~----i~~~~Gi~~R~~~~~~-----------------e~~~~la~ 121 (401)
..|.++++++|++++++.|+.+.+.. .-+. +...-+|++|+...+. |....+++
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v 81 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGV 81 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHH
Confidence 36899999999999999777664421 1222 3346678888887542 35789999
Q ss_pred HHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHHcCCCCeEE
Q 015758 122 EAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVL 200 (401)
Q Consensus 122 ~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~~g~~~~vL 200 (401)
+|.++||+.+++.|+|||+|+++|+|+...++...+|..+||++++...+.+. .||+++..+|..|+.++++.+..+||
T Consensus 82 ~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vl 161 (356)
T COG3424 82 DALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVL 161 (356)
T ss_pred HHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEE
Confidence 99999999999999999999999999988888899999999999999999885 89999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCC-----ccccccceeEEEEEeeccC-CCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCc
Q 015758 201 VIGGDALSRFTDWTDRG-----SCILFGDAAGAVLVQACDS-EDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGS 274 (401)
Q Consensus 201 vv~~d~~s~~~~~~dr~-----~~~lfGDGAaAvll~~~~~-~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~ 274 (401)
||++|.||-.+...|+. ...+||||++|+|++.+.. ....-...++.. + . -++ +. +.++.+++
T Consensus 162 vV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~-s-~-StL---~~--dse~~Mgw--- 230 (356)
T COG3424 162 VVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILD-S-F-STL---YP--DSEDIMGW--- 230 (356)
T ss_pred EEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecc-c-c-ccc---CC--ccccccce---
Confidence 99999999655443332 2469999999999997532 111111222221 0 0 011 11 11222221
Q ss_pred ccccCCCCCCcccEEE-chHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhh---h
Q 015758 275 VLAFPPQHYSYSSIYM-NGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVI---S 350 (401)
Q Consensus 275 ~~~~p~~~~~~~~~~m-~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~---~ 350 (401)
++. ... +++ ..+++...+...+...+..+|...|++.+||+.|+.|++++++++++.+.||++++... +
T Consensus 231 --dv~--d~G---~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~ 303 (356)
T COG3424 231 --DVG--DQG---LKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWD 303 (356)
T ss_pred --eec--CCc---EEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHH
Confidence 111 111 222 24566666777888999999999999999999999999999999999999999999884 6
Q ss_pred cccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 351 NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 351 ~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
.+.+|||++|+++++.|.+.+++. .++|++.++.+||+|++...++++|+
T Consensus 304 ~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~ 353 (356)
T COG3424 304 VLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWE 353 (356)
T ss_pred HHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEee
Confidence 889999999999999999999975 78999999999999999999999995
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=312.97 Aligned_cols=314 Identities=17% Similarity=0.227 Sum_probs=224.7
Q ss_pred CeEEEEEEEEcCCC--ccChHHHHhhhC---Cch-------hhhhhhcCcce-----------eEecC--CCCCHHHHHH
Q 015758 67 GCKLVGCGSAVPTL--QISNDDLAKIVD---TSD-------EWISVRTGIRN-----------RRVLS--GKESLTGLAV 121 (401)
Q Consensus 67 ~v~I~gig~~lP~~--~v~~~~l~~~~~---~~~-------~~i~~~~Gi~~-----------R~~~~--~~e~~~~la~ 121 (401)
+|+++...+|-|+. +++.+.+.+... .-+ .+|.+++||.+ ++... +.+...+|+.
T Consensus 59 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~em~i 138 (466)
T PLN00415 59 PVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVI 138 (466)
T ss_pred cEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHHHHHH
Confidence 68999999999875 688888876542 111 23445555544 43332 2345677777
Q ss_pred H-HHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCc-cChHHHHHHHHHHHHHHcCCCCe
Q 015758 122 E-AASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITA-ACSGFLLGLVSAACHIRGGGFRN 198 (401)
Q Consensus 122 ~-Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~-~C~~~~~aL~~A~~~l~~g~~~~ 198 (401)
. |++++|+++|++|+|||+||+ +++++.. ++.+.+|++++|+++++.+|+++. ||+|++.+|.+|.+++++++.++
T Consensus 139 ~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~ 217 (466)
T PLN00415 139 FGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTY 217 (466)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCE
Confidence 6 778899999999999999985 5677644 457999999999987899999985 99999999999999999999999
Q ss_pred EEEEEeccCCCCC-CCCCCCcc---ccccceeEEEEEeeccCCCCCeeEEEE---eec--CCCCCceeeeccCCCccccc
Q 015758 199 VLVIGGDALSRFT-DWTDRGSC---ILFGDAAGAVLVQACDSEDDGLISFDV---HSD--GEGGRHLNACIKGNQTNDAL 269 (401)
Q Consensus 199 vLvv~~d~~s~~~-~~~dr~~~---~lfGDGAaAvll~~~~~~~~gl~~~~~---~s~--g~~~~~l~~~~~~~~~~~~~ 269 (401)
+|||++|.+|... ++.|+... .+|||||+|+||++.+.+. +...+++ ... +...+.+...+
T Consensus 218 aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~-~~~~~~L~~~vrt~~~~~d~~~~~~~--------- 287 (466)
T PLN00415 218 AVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDR-VRSKYELTHIVRTHKGSSDKHYTCAE--------- 287 (466)
T ss_pred EEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccc-cCccceeeeEEEecCCCChhhhccee---------
Confidence 9999999999654 67777543 6999999999999854221 1111221 110 10000000000
Q ss_pred CCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHH---------------------HHHcCCCc--CC----cC
Q 015758 270 GSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESA---------------------LEKAGLTM--SS----ID 322 (401)
Q Consensus 270 ~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~a---------------------L~~agl~~--~d----Id 322 (401)
...+.+.+..+. -.+++...+.+.++..+..+ +.+.++++ .| ++
T Consensus 288 --------~~~d~~G~~gv~-Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~ 358 (466)
T PLN00415 288 --------QKEDSKGIVGVA-LSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFK 358 (466)
T ss_pred --------eeecCCCcceEE-EChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccce
Confidence 001111111111 13555555444444333322 11112332 23 88
Q ss_pred EEEecccCHHHHHHHHHHcCCCchhhh---hcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEE
Q 015758 323 WLLLHQANQRIIDAVANRLDVPMERVI---SNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 323 ~~i~Hq~~~~i~~~i~~~lgl~~e~~~---~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
+|++|+++++++|.+++.||++++++. .++.+||||+|+|+++.|++..++++.++||++++++||+|+++.++++|
T Consensus 359 hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~~ 438 (466)
T PLN00415 359 HFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWR 438 (466)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHHH
Confidence 999999999999999999999998774 68999999999999999999998889999999999999999999999988
Q ss_pred e
Q 015758 400 W 400 (401)
Q Consensus 400 ~ 400 (401)
|
T Consensus 439 ~ 439 (466)
T PLN00415 439 A 439 (466)
T ss_pred H
Confidence 7
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=300.60 Aligned_cols=302 Identities=25% Similarity=0.327 Sum_probs=250.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|.++|.++|.|+|..+|+.+|+++.++...+.+..-.|+.+|.+...+|+..+|+++|++++|+++++||++|+.|+++|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 56899999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
.++.+.. +.+.+|+..||+++++.++|+..+|-++..||++|..++.+|..+++|||++|....-.. + ..-...|+
T Consensus 81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~--~-~~E~t~GA 157 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPG--D-ALEYTAGA 157 (377)
T ss_pred CCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCCC--c-ccCccCCC
Confidence 8876654 889999999999999999999999999999999999999999999999999999653221 1 12257899
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||+.++ ..+ ..+...+. . ..++.+.|++.+.. +|..+..+ ...-+.+++.
T Consensus 158 GavA~lIg~n~---~~~--a~~~~~~s----y-----t~d~~DFwRp~~~~--yp~~dg~~---------s~~~Y~~~~~ 212 (377)
T COG3425 158 GAVAFLIGKNP---PIV--AEFEGTGS----Y-----TTDTPDFWRPDGQP--YPYVDGRF---------SEPAYFKHVE 212 (377)
T ss_pred ceEEEEEccCC---CeE--EEecCceE----E-----ecCCCcccccCCCc--ccccCcee---------cHHHHHHHHH
Confidence 99999999742 111 11111111 1 12233455555542 44333221 1223467899
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcc---cccCccccChHHHHHHHHHHcCCCCCCCE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL---ANYGNTSAASIPLALDEAVRSGKVKPGHT 381 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l---~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ 381 (401)
++.++.+++.|++++|+|++++||++.++....++.++++.+++...+ ++.||++++|+++.|..+|+..+ ++||+
T Consensus 213 ~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~r 291 (377)
T COG3425 213 NAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDR 291 (377)
T ss_pred HHHHHHHHHhCCChhhhCeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCE
Confidence 999999999999999999999999999999999999999999987543 48999999999999999999766 79999
Q ss_pred EEEEeeehhhhheee
Q 015758 382 IAAAGFGAGLTWGSA 396 (401)
Q Consensus 382 ill~~~G~G~s~~a~ 396 (401)
|++++||+|......
T Consensus 292 Il~~SYGSGa~s~~f 306 (377)
T COG3425 292 ILLFSYGSGAGSEAF 306 (377)
T ss_pred EEEEeeCCCcceeEE
Confidence 999999999765443
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=294.80 Aligned_cols=306 Identities=18% Similarity=0.215 Sum_probs=218.1
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeE--ecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEE
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRR--VLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMC 144 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~--~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 144 (401)
+|+|.++|.|+|+++|+++++++..+.+++|+ .+||.+|+ ++.++|+..+|+++|++++|++++++|++||+||++
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~--~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~ 78 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKY--TIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVG 78 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHh--eechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 47999999999999999999999988888887 58999998 678899999999999999999999999999999999
Q ss_pred ecCCCCCC-chHHHHHHHc---CCCCCCeeEeeCccChHHHHHHHHHHHHHHcCC--CCeEEEEEeccCCCCCCCCCCCc
Q 015758 145 TSTPEDLF-GGATQIPKAL---GCKNNPLAYDITAACSGFLLGLVSAACHIRGGG--FRNVLVIGGDALSRFTDWTDRGS 218 (401)
Q Consensus 145 t~~~~~~~-~~a~~i~~~l---Gl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~--~~~vLvv~~d~~s~~~~~~dr~~ 218 (401)
|.++++.. +.+.+|++.| |. +++.+||+.++|+|++.||.+|.++|+++. .++||||++|.. ++.+...
T Consensus 79 TeS~~d~sps~a~~v~~lL~~lG~-~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia----~y~~~~~ 153 (454)
T TIGR01833 79 TETIIDKSKSVKTVLMQLFEESGN-TDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIA----VYAKGNA 153 (454)
T ss_pred CCCCCCCCCchHHHHHHHHHhcCC-CCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccc----cccCCCe
Confidence 99998876 5688888854 56 579999999999999999999999999985 599999999993 3333334
Q ss_pred cccccceeEEEEEeeccCC--CCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEc-hHHH
Q 015758 219 CILFGDAAGAVLVQACDSE--DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMN-GKEV 295 (401)
Q Consensus 219 ~~lfGDGAaAvll~~~~~~--~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~-g~~v 295 (401)
..++||||+|+||++++.- +.++....+. ++ .+.+.++... .+|..+..++ .+ =.+-
T Consensus 154 ~~t~GaGAvAmLv~~~~~~~~~~~~~~~~~~-------~~---------~DF~rP~~~~-~~p~vdg~~S---~~~Yl~a 213 (454)
T TIGR01833 154 RPTGGAGAVAMLIGPNAPIVFERGLRGSHMQ-------HA---------YDFYKPDLAS-EYPVVDGKLS---IQCYLSA 213 (454)
T ss_pred eeccccceEEEEeccCccceecCccceEEEe-------ec---------ccccCCCCCC-cccccCCccC---HHHHHHH
Confidence 5688999999999875420 1111111111 11 1112221110 1222111111 00 0011
Q ss_pred HHHHHHHHHHHHHHHHHHc----CCCcCCcCEEEecccCHHHHHHH-HHHc----C-C----------------------
Q 015758 296 FRFAVRVVPQTIESALEKA----GLTMSSIDWLLLHQANQRIIDAV-ANRL----D-V---------------------- 343 (401)
Q Consensus 296 ~~~~~~~~~~~i~~aL~~a----gl~~~dId~~i~Hq~~~~i~~~i-~~~l----g-l---------------------- 343 (401)
|+.......+.+.+++++. ++.++|+|++++|+|..++.... .+.+ . -
T Consensus 214 ~~~~y~~y~~~~~~a~~~~~~~~~~~~~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (454)
T TIGR01833 214 LDRCYKSYCKKIEKQWGKSGGDRKFTLNDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLED 293 (454)
T ss_pred HHHHHHHHHHHHHHhhhhhccccCCCHhHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhcccccc
Confidence 1111122223333344443 68899999999999998887654 3222 1 0
Q ss_pred ------------------Cchhhhhc---ccccCccccChHHHHHHHHHHcCC--CCCCCEEEEEeeehhhhheeeEEE
Q 015758 344 ------------------PMERVISN---LANYGNTSAASIPLALDEAVRSGK--VKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 344 ------------------~~e~~~~~---l~~~Gn~~sasi~~~L~~~l~~g~--~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
..+|+... -.+.||++++|+++.|..+++..+ ...|++|+++++|+|......-++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~ 372 (454)
T TIGR01833 294 TYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLR 372 (454)
T ss_pred ccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEE
Confidence 01333322 248999999999999999998643 457999999999999876655444
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=248.66 Aligned_cols=233 Identities=27% Similarity=0.301 Sum_probs=191.2
Q ss_pred CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHc
Q 015758 115 SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~ 193 (401)
+..+|+.+|++++|+++|++++|||.|++++++++.. +..+.+|+..+|++ +.+++++.++|++++.||++|.++|++
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHHC
Confidence 3789999999999999999999999999999998774 45689999999996 789999999999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCCCCCCCccccccceeEEEEEeeccCC-CCC--eeEEEEeecCCCCCceeeeccCCCcccccC
Q 015758 194 GGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE-DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALG 270 (401)
Q Consensus 194 g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAaAvll~~~~~~-~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~ 270 (401)
|+++++||+++|. .+|||||+|+||++.+.. ..+ .+ ..+...+. . ..
T Consensus 85 g~~~~~lv~~~e~-------------~~~gdGAaa~vL~~~~~a~~~~~~~~-~~i~~~~~--~------~~-------- 134 (254)
T cd00327 85 GKADIVLAGGSEE-------------FVFGDGAAAAVVESEEHALRRGAHPQ-AEIVSTAA--T------FD-------- 134 (254)
T ss_pred CCCCEEEEEecce-------------eeecceEEEEEECcHHHHHHCCCceE-EEEEEEEE--c------CC--------
Confidence 9999999999998 489999999999985421 111 10 01110000 0 00
Q ss_pred CCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhh--
Q 015758 271 SNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERV-- 348 (401)
Q Consensus 271 ~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~-- 348 (401)
+.. .. +....+.+.++++++|+++|++++|||+|++|+.+..+.+.+++.+++++++.
T Consensus 135 --~~~--~~----------------~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 194 (254)
T cd00327 135 --GAS--MV----------------PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRS 194 (254)
T ss_pred --CCC--CC----------------CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCC
Confidence 000 00 00012456789999999999999999999999999999999999999988777
Q ss_pred ---hhcccccCccccChHHHHHHHHHHcCCCC-------CCCEEEEEeeehhhhheeeEE
Q 015758 349 ---ISNLANYGNTSAASIPLALDEAVRSGKVK-------PGHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 349 ---~~~l~~~Gn~~sasi~~~L~~~l~~g~~~-------~Gd~ill~~~G~G~s~~a~ll 398 (401)
..+..+|||++++|.++.|.+++++.+.+ +|+++++++||.|++++++++
T Consensus 195 ~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 195 PAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 35778999999999999999998876655 899999999999999999885
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=256.73 Aligned_cols=245 Identities=30% Similarity=0.357 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHhCCCC----cCCCCEEEEEecCCCCC---------------------C-chHHHHHHHcCCCCCCe
Q 015758 116 LTGLAVEAASRALQMAEVN----PEDVDLVLMCTSTPEDL---------------------F-GGATQIPKALGCKNNPL 169 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~----~~~Id~li~~t~~~~~~---------------------~-~~a~~i~~~lGl~~~~~ 169 (401)
..+|+++|++++|+++|++ +++||.||++++++... + ..+.+|+..+|+ +.+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI--HGP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC--CCC
Confidence 7899999999999999999 99999999999876542 2 357899999999 478
Q ss_pred eEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCC------------------CCCCccccccceeEEEEE
Q 015758 170 AYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDW------------------TDRGSCILFGDAAGAVLV 231 (401)
Q Consensus 170 ~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~------------------~dr~~~~lfGDGAaAvll 231 (401)
+++++++|++++.||+.|.++|++|+.+++||+++|..+....+ .++..+.+|||||+|+||
T Consensus 89 ~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL 168 (332)
T cd00825 89 AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVV 168 (332)
T ss_pred ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEE
Confidence 99999999999999999999999999999999999987643211 223456799999999999
Q ss_pred eeccCC-CCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHH
Q 015758 232 QACDSE-DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIE 308 (401)
Q Consensus 232 ~~~~~~-~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~ 308 (401)
++.+.. ..+ +. ..+...+... .+..... +....+.+.++++
T Consensus 169 ~~~~~a~~~~~~~~-~~i~~~~~~~------------------~~~~~~~-----------------~~~~~~~~~~~i~ 212 (332)
T cd00825 169 EELEHALARGAHIY-AEIVGTAATI------------------DGAGMGA-----------------FAPSAEGLARAAK 212 (332)
T ss_pred CcHHHHHHCCCeEE-EEEEEEEEcc------------------CCCCCCC-----------------CCcCHHHHHHHHH
Confidence 975421 111 11 1111100000 0000000 0001245668999
Q ss_pred HHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchh-----hhhcccccCccccChHHHHHHHHHHcCCCC------
Q 015758 309 SALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMER-----VISNLANYGNTSAASIPLALDEAVRSGKVK------ 377 (401)
Q Consensus 309 ~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~-----~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~------ 377 (401)
++|+++|++++|||++++|+.+.++.+.++++++++.++ +..+..+|||+++++.++.|.++++..+.+
T Consensus 213 ~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~ 292 (332)
T cd00825 213 EALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSI 292 (332)
T ss_pred HHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCC
Confidence 999999999999999999999999999999888777664 346788999999999999999998866555
Q ss_pred -------------------CCCEEEEEeeehhhhheeeEE
Q 015758 378 -------------------PGHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 378 -------------------~Gd~ill~~~G~G~s~~a~ll 398 (401)
+|+++++.+||.|+++++++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 293 HIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 789999999999999999985
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=221.85 Aligned_cols=297 Identities=21% Similarity=0.244 Sum_probs=216.2
Q ss_pred CeEEEEEEEEcCCCc------------cChHHHHhhhCCc-hhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCC-
Q 015758 67 GCKLVGCGSAVPTLQ------------ISNDDLAKIVDTS-DEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAE- 132 (401)
Q Consensus 67 ~v~I~gig~~lP~~~------------v~~~~l~~~~~~~-~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~ag- 132 (401)
+++|.++|...|=-. ++|.+...+++.. ++||..++|+.+|++. .+++..+|+.+|++++|++++
T Consensus 4 ~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~r~~~La~~Al~~aL~~a~~ 82 (348)
T PRK06147 4 ALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWR-GPERLAEMAAPAIAEALEGLPA 82 (348)
T ss_pred ceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccC-chHHHHHHHHHHHHHHHHhccc
Confidence 466677666666443 4555555555654 7899999999999984 467899999999999999999
Q ss_pred CCcCCCCEEEEEec-----CCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEecc
Q 015758 133 VNPEDVDLVLMCTS-----TPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDA 206 (401)
Q Consensus 133 i~~~~Id~li~~t~-----~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~ 206 (401)
+++++||++|..++ .+++.. +.+..+++++|+..+.++++|+.+|++++.||..|.++|++|.++.+||+++|.
T Consensus 83 ~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~ 162 (348)
T PRK06147 83 LDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDS 162 (348)
T ss_pred ccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence 79999999998654 223333 457899999999555778999999999999999999999999999999999998
Q ss_pred CCCC--CCC---------CCCCccccccceeEEEEEeeccCC-CCC--eeEEEEeecCCCCCceeeeccCCCcccccCCC
Q 015758 207 LSRF--TDW---------TDRGSCILFGDAAGAVLVQACDSE-DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSN 272 (401)
Q Consensus 207 ~s~~--~~~---------~dr~~~~lfGDGAaAvll~~~~~~-~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~ 272 (401)
++.. +.+ .++...++|||||+++||++.+.. ..+ ++......++. +..
T Consensus 163 ~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a~g~~~~~~---~~~--------------- 224 (348)
T PRK06147 163 LLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLGLGLGREPA---PVG--------------- 224 (348)
T ss_pred ccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceEEEEEeecCC---Ccc---------------
Confidence 7652 111 344567899999999999985421 122 33211111110 000
Q ss_pred CcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCch-
Q 015758 273 GSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPME- 346 (401)
Q Consensus 273 G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e- 346 (401)
... .-|. ++ +.+.++++++|+++|++++|||+++.|..+....+. +.+.++-..+
T Consensus 225 ~~~-~~p~----------~g--------~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~ 285 (348)
T PRK06147 225 ESE-DLPL----------RG--------DGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEF 285 (348)
T ss_pred cCC-CCCC----------Ch--------HHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCC
Confidence 000 0010 11 456689999999999999999999999998766443 3344553222
Q ss_pred -hhhhcccccCccccChHHHHHHHHHHc--CCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 347 -RVISNLANYGNTSAASIPLALDEAVRS--GKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 347 -~~~~~l~~~Gn~~sasi~~~L~~~l~~--g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
.+..+...+||+++|+-++.+..++.. ...-+|+++|+++......-++++|+.+
T Consensus 286 ~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~ 343 (348)
T PRK06147 286 FDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARAALVLEYR 343 (348)
T ss_pred CceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceEEEEEecc
Confidence 234567799999999999988765543 3456799999999999999999999864
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-25 Score=199.86 Aligned_cols=170 Identities=28% Similarity=0.331 Sum_probs=136.9
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh----CCch--------hhhhhhcCcceeEecCCC-------------------
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV----DTSD--------EWISVRTGIRNRRVLSGK------------------- 113 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~----~~~~--------~~i~~~~Gi~~R~~~~~~------------------- 113 (401)
..+.+|.+||+.+|+++++++++.+++ .... .++.+++||++||...++
T Consensus 12 ~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~ 91 (226)
T PF00195_consen 12 PGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAE 91 (226)
T ss_dssp SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHH
T ss_pred CCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHH
Confidence 567899999999999999999998753 1111 246789999999998531
Q ss_pred ------CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHH
Q 015758 114 ------ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVS 186 (401)
Q Consensus 114 ------e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~ 186 (401)
+...+|+.+|+++||+++|++++||++||++|+|+...++...+|.++||++++...+.|. .||.+++.+|..
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~ 171 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRR 171 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHH
Confidence 2357899999999999999999999999999999988888999999999999999999986 899999999999
Q ss_pred HHHHHHcCCCCeEEEEEeccCCCCCCC-CCCC-----ccccccceeEEEEEeec
Q 015758 187 AACHIRGGGFRNVLVIGGDALSRFTDW-TDRG-----SCILFGDAAGAVLVQAC 234 (401)
Q Consensus 187 A~~~l~~g~~~~vLvv~~d~~s~~~~~-~dr~-----~~~lfGDGAaAvll~~~ 234 (401)
|..+.++.+..+||||++|.+|-+++. .|.. ...+|||||+|+||+.+
T Consensus 172 A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~d 225 (226)
T PF00195_consen 172 AKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGAD 225 (226)
T ss_dssp HHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS
T ss_pred HHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccC
Confidence 999999999999999999999976652 3321 23699999999999875
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-22 Score=187.44 Aligned_cols=275 Identities=18% Similarity=0.241 Sum_probs=190.2
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCC--chhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEE
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDT--SDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVL 142 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~--~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li 142 (401)
..+++|++.++.+-+.. -+--|.+.|+. .|.|+ .++++ +.+..+|+.+|+++||+++|++++|||+|+
T Consensus 7 ~~~p~i~~~~~~~g~~e-~~gpl~~~fd~~~~d~~~------g~ks~---EkAe~eLa~eAa~~ALekAGL~~~DID~II 76 (327)
T TIGR02845 7 ENPPVIVSAGTAVGPKE-GEGPLGDYFDKIYDDLYC------GEDSW---EKAERKLMEDAVNLALKKANLKKDDVDFFL 76 (327)
T ss_pred cCCCEEEEEEEEecCcc-ccCCChhhCCEEEecccc------CCcCc---chhHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 56789999999987654 33344444432 22222 22322 457889999999999999999999999999
Q ss_pred EEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC------CCC-CC--
Q 015758 143 MCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS------RFT-DW-- 213 (401)
Q Consensus 143 ~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s------~~~-~~-- 213 (401)
.++. +++. ..+..+++.||+ +.+++..+|++|+.+|.+|..+|++|.+++|||+++|.++ ++. +|
T Consensus 77 vGdl-~~Q~-~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr~p~eyg~ 150 (327)
T TIGR02845 77 AGDL-LNQI-ITANFVARDLGI----PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQFRYPTEYGV 150 (327)
T ss_pred EeCC-CCcc-cHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhccccccccc
Confidence 9873 4322 358899999997 3599999999999999999999999999999999988877 555 77
Q ss_pred CCCCccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchH
Q 015758 214 TDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGK 293 (401)
Q Consensus 214 ~dr~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~ 293 (401)
.+|.++.+|||||+|+||++.+. .+.+-...+ | ..+++--+.+ ++|-.
T Consensus 151 q~~~ta~~tgdGAGA~vl~~~~~-~~~i~~~t~---g-----------------------kv~d~g~~d~----~nmga- 198 (327)
T TIGR02845 151 QKPPTAQWTVTGAGAVLLASTGG-GPRITSATI---G-----------------------KVVDYGITDP----LDMGA- 198 (327)
T ss_pred CCCCeeeEEEcccEEEEEeecCC-CCceEEEEE---E-----------------------EEEecCCCCc----ccchh-
Confidence 67888899999999999997542 233322222 2 1111111110 22321
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecc---cCHHHHHHHHHHcCCCchhhh-h----cc-----cccCcccc
Q 015758 294 EVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQ---ANQRIIDAVANRLDVPMERVI-S----NL-----ANYGNTSA 360 (401)
Q Consensus 294 ~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq---~~~~i~~~i~~~lgl~~e~~~-~----~l-----~~~Gn~~s 360 (401)
. ......+.|.+.|++.|.+++|.|.++.-- .+.+|+..+.++-|++.++.+ + .+ -.-|-.||
T Consensus 199 a----mapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc 274 (327)
T TIGR02845 199 A----MAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGC 274 (327)
T ss_pred h----hhHHHHHHHHHHHHHcCCChhhccEEEecchHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCccc
Confidence 1 123455788899999999999999999754 567888888888888776543 1 01 12344555
Q ss_pred ChHHHHHHHHHHcCCCCCC--CEEEEEeeehhhh
Q 015758 361 ASIPLALDEAVRSGKVKPG--HTIAAAGFGAGLT 392 (401)
Q Consensus 361 asi~~~L~~~l~~g~~~~G--d~ill~~~G~G~s 392 (401)
+.....+.-.+-+ +++.| .+||+++.|+=+|
T Consensus 275 ~csa~v~~~~~~~-~~~~g~~~r~l~v~tgalls 307 (327)
T TIGR02845 275 ACSAVVTYGHILK-EMLRGKLKKVLVVATGALLS 307 (327)
T ss_pred chhHHHHHHHHHH-HHhcCcceEEEEEEchhhcC
Confidence 5544444333321 34444 5799999997544
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-24 Score=168.76 Aligned_cols=90 Identities=51% Similarity=0.997 Sum_probs=80.9
Q ss_pred HHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehh
Q 015758 311 LEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAG 390 (401)
Q Consensus 311 L~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G 390 (401)
|+++|++++|||+|++||+|.++++.+++.+|+++++++.++++|||++++|+|++|+++++++++++||+|+++++|+|
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G 80 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAG 80 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETT
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeeEEEe
Q 015758 391 LTWGSAILRW 400 (401)
Q Consensus 391 ~s~~a~llr~ 400 (401)
++|+++++||
T Consensus 81 ~~~~~~~~~~ 90 (90)
T PF08541_consen 81 FSWGAAVLRW 90 (90)
T ss_dssp TEEEEEEEE-
T ss_pred heeEEEEEEC
Confidence 9999999999
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=172.29 Aligned_cols=165 Identities=18% Similarity=0.207 Sum_probs=134.2
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
++|+|.+++.|+|...++.++|++..+.+..++....|.+++.+..++|+...|++.|++++|++.+++|++|+.|+++|
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgT 82 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGT 82 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-
T ss_pred ccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEEec
Confidence 57999999999999999999999999888888888889999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCC--CCCCeeEeeCccChHHHHHHHHHHHHHHcCC--CCeEEEEEeccCCCCCCCCCCCccc
Q 015758 146 STPEDLF-GGATQIPKALGC--KNNPLAYDITAACSGFLLGLVSAACHIRGGG--FRNVLVIGGDALSRFTDWTDRGSCI 220 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl--~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~--~~~vLvv~~d~~s~~~~~~dr~~~~ 220 (401)
.+..|.. +.+.+|++.||+ +.++..+++.++|.|+..||+.|..+|+++. .+++|||++|....-.. ....
T Consensus 83 ES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g----~~e~ 158 (174)
T PF01154_consen 83 ESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLG----SAEP 158 (174)
T ss_dssp SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STT----TTGG
T ss_pred cccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCC----Cccc
Confidence 9887665 789999999999 4456789999999999999999999999974 57999999999742111 1235
Q ss_pred cccceeEEEEEeec
Q 015758 221 LFGDAAGAVLVQAC 234 (401)
Q Consensus 221 lfGDGAaAvll~~~ 234 (401)
.-|-||.|+||+++
T Consensus 159 TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 159 TQGAGAVAMLIGPN 172 (174)
T ss_dssp G-EEEEEEEEEECS
T ss_pred cccceeEEEEecCC
Confidence 78999999999874
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=188.09 Aligned_cols=293 Identities=20% Similarity=0.289 Sum_probs=191.8
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCC-c------hhh------------hhh---hcCcceeEecCCCCCHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDT-S------DEW------------ISV---RTGIRNRRVLSGKESLTGLAVEA 123 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~-~------~~~------------i~~---~~Gi~~R~~~~~~e~~~~la~~A 123 (401)
+.|.|+|+|..+|... +.+++++.+-. . +.+ +.. ...+..+... .-....+|+.+|
T Consensus 1 ~~i~I~G~g~~~p~g~-~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~l~~~a 78 (406)
T cd00834 1 RRVVITGLGAVTPLGN-GVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELR-RMDRFAQFALAA 78 (406)
T ss_pred CcEEEECcceeCCCcC-CHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhc-cCCHHHHHHHHH
Confidence 3689999999999875 56666664311 0 000 000 0011111111 113578999999
Q ss_pred HHHHHHhCCCCcCCCCE----EEEEecCCCC--------------------------CC-chHHHHHHHcCCCCCCeeEe
Q 015758 124 ASRALQMAEVNPEDVDL----VLMCTSTPED--------------------------LF-GGATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 124 a~~aL~~agi~~~~Id~----li~~t~~~~~--------------------------~~-~~a~~i~~~lGl~~~~~~~~ 172 (401)
+++||+++|++++++|. ++++++.+.. .. ..+.+|+..||++ .+.++
T Consensus 79 a~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~~~~ 156 (406)
T cd00834 79 AEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLR--GPNYT 156 (406)
T ss_pred HHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCC--Ccccc
Confidence 99999999999877664 5666554321 11 2477999999993 78899
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------------------CCCCCCCCccccccceeEEE
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------------------FTDWTDRGSCILFGDAAGAV 229 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------------------~~~~~dr~~~~lfGDGAaAv 229 (401)
+..+|+|++.||..|.++|++|.++++||+++|..+. ...+..+...+++||||+|+
T Consensus 157 v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geGA~a~ 236 (406)
T cd00834 157 VSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVL 236 (406)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeeccEEEE
Confidence 9999999999999999999999999999999998761 11122233467999999999
Q ss_pred EEeeccCC-CCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHH
Q 015758 230 LVQACDSE-DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306 (401)
Q Consensus 230 ll~~~~~~-~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~ 306 (401)
||++.+.. +.+ +.. .+...+...+ +.....|.. + ...+.++
T Consensus 237 vL~~~~~A~~~g~~~~a-~i~g~~~~~d------------------~~~~~~~~~---------~--------~~~~~~~ 280 (406)
T cd00834 237 VLESLEHAKARGAKIYA-EILGYGASSD------------------AYHITAPDP---------D--------GEGAARA 280 (406)
T ss_pred EEecHHHHHHCCCeEEE-EEEEEEeccc------------------CCCCCCCCC---------C--------cHHHHHH
Confidence 99985421 222 211 1211111000 000001100 0 1345688
Q ss_pred HHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhhh--hcccccCccccChHHHHHHHHH---HcCCC
Q 015758 307 IESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERVI--SNLANYGNTSAASIPLALDEAV---RSGKV 376 (401)
Q Consensus 307 i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l---~~g~~ 376 (401)
++++|+++|++++|||++.+|..+....|. +.+.++-..++++ .....+||+.+|+-.+.|..++ +++.+
T Consensus 281 i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 360 (406)
T cd00834 281 MRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVL 360 (406)
T ss_pred HHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCc
Confidence 999999999999999999999988765553 4445554333443 4566899999998888776653 33321
Q ss_pred C------------------------CCCEEEEEeeehhhhheeeEE
Q 015758 377 K------------------------PGHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 377 ~------------------------~Gd~ill~~~G~G~s~~a~ll 398 (401)
. +-.+++..+||.|.+..+++|
T Consensus 361 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 361 PPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 1 124678889999999888875
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-19 Score=179.38 Aligned_cols=243 Identities=23% Similarity=0.300 Sum_probs=168.8
Q ss_pred CHHHHHHHHHHHHHHhCCCCcCCCC----EEEEEecCCCCC-------------------C-chHHHHHHHcCCCCCCee
Q 015758 115 SLTGLAVEAASRALQMAEVNPEDVD----LVLMCTSTPEDL-------------------F-GGATQIPKALGCKNNPLA 170 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~~~~Id----~li~~t~~~~~~-------------------~-~~a~~i~~~lGl~~~~~~ 170 (401)
+...|+.+|+++||+++|+++++|| .|+++++++++. . ..+.+|+..+|++ .++
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCc
Confidence 3567999999999999999999998 788887654321 1 2367899999994 688
Q ss_pred EeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CC------C-CCCCCccccccceeEEEEEe
Q 015758 171 YDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FT------D-WTDRGSCILFGDAAGAVLVQ 232 (401)
Q Consensus 171 ~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~------~-~~dr~~~~lfGDGAaAvll~ 232 (401)
+++..+|++++.||..|.++|++|.++.+||+++|.... .+ + +..+..++++||||+|+||+
T Consensus 164 ~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalVLe 243 (424)
T smart00825 164 VTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLK 243 (424)
T ss_pred cccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEEEc
Confidence 999999999999999999999999999999999997432 11 1 11223467899999999999
Q ss_pred eccC-CCCC--ee----EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHH
Q 015758 233 ACDS-EDDG--LI----SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305 (401)
Q Consensus 233 ~~~~-~~~g--l~----~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~ 305 (401)
+.+. .+.+ ++ ++...+++. +. +. ..| ++ ..+.+
T Consensus 244 ~~e~A~~~g~~i~a~I~g~~~~~~~~---~~----------------~~--~~~-----------~~--------~~~~~ 283 (424)
T smart00825 244 RLSDALRDGDPILAVIRGSAVNQDGR---SN----------------GL--TAP-----------SG--------PAQAR 283 (424)
T ss_pred cHHHHHHCCCeEEEEEEEEEEeCCCC---CC----------------CC--CCc-----------CH--------HHHHH
Confidence 7542 1112 21 111111110 00 00 001 11 34457
Q ss_pred HHHHHHHHcCCCcCCcCEEEecccCHHHH-----HHHHHHcCCCc---hhhh--hcccccCccccChHHHHHHHHH---H
Q 015758 306 TIESALEKAGLTMSSIDWLLLHQANQRII-----DAVANRLDVPM---ERVI--SNLANYGNTSAASIPLALDEAV---R 372 (401)
Q Consensus 306 ~i~~aL~~agl~~~dId~~i~Hq~~~~i~-----~~i~~~lgl~~---e~~~--~~l~~~Gn~~sasi~~~L~~~l---~ 372 (401)
+++++|+++|++++|||++.+|..+.... +.+.+.++... .++. .....+||+.+|+-.+.|...+ +
T Consensus 284 a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 363 (424)
T smart00825 284 LIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALR 363 (424)
T ss_pred HHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHh
Confidence 89999999999999999999997765433 34555565321 2222 3456789999998877776543 2
Q ss_pred cCCC--------------------------C------CCCEEEEEeeehhhhheeeEEE
Q 015758 373 SGKV--------------------------K------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 ~g~~--------------------------~------~Gd~ill~~~G~G~s~~a~llr 399 (401)
++.+ + .-+.++..+||.|....+++|+
T Consensus 364 ~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 364 HGTIPPTLHFETPNPHIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred CCCCCCCCCCCCCCCCCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 2211 0 1366889999999999999986
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-19 Score=177.17 Aligned_cols=259 Identities=24% Similarity=0.183 Sum_probs=183.8
Q ss_pred hcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChH
Q 015758 101 RTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSG 179 (401)
Q Consensus 101 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~ 179 (401)
+|.+.++.-...+++..+|+.+|+++||+++|++++|||.||+++++++... ..+.+++..||++.+.++++|+++|++
T Consensus 7 ~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~~c~s 86 (386)
T cd00751 7 RTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGS 86 (386)
T ss_pred cCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhccccHH
Confidence 3444444433446899999999999999999999999999999887765543 456779999999544789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC-----------------CC------CCC--------------------
Q 015758 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSRFT-----------------DW------TDR-------------------- 216 (401)
Q Consensus 180 ~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~-----------------~~------~dr-------------------- 216 (401)
++.+|..|.++|++|.+++|||+++|.+|+.. .+ .++
T Consensus 87 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~t 166 (386)
T cd00751 87 GLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGIS 166 (386)
T ss_pred HHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999765210 00 000
Q ss_pred -------------------------------------------------C-----------------------ccccccc
Q 015758 217 -------------------------------------------------G-----------------------SCILFGD 224 (401)
Q Consensus 217 -------------------------------------------------~-----------------------~~~lfGD 224 (401)
. .+..++|
T Consensus 167 re~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~d 246 (386)
T cd00751 167 REEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGIND 246 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCc
Confidence 0 0012368
Q ss_pred eeEEEEEeeccCC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302 (401)
Q Consensus 225 GAaAvll~~~~~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~ 302 (401)
||+|+||++.+.. +.+.-. ..+...+... +-+. .. ...
T Consensus 247 Gaaavvl~s~~~a~~~~~~~~~~I~g~~~~~-----------------------~~~~-------~~----------~~~ 286 (386)
T cd00751 247 GAAAVLLMSEEKAKELGLKPLARIVGYAVAG-----------------------VDPA-------IM----------GIG 286 (386)
T ss_pred ceEEEEEecHHHHHHCCCCeeEEEEEEEEcc-----------------------CCCc-------cc----------chh
Confidence 8888888875421 111100 0111000000 0000 00 012
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGH 380 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd 380 (401)
...+++++|+++|++++|||++.+|-......-...+.||+.+..++.+ .-.+||+..++-...+.+++.+-+-+.+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~~~ 366 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGR 366 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeechhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhcCCC
Confidence 2478899999999999999999999888766666788999887655432 23789999998888888887764434677
Q ss_pred EEEEEeeehhhhheeeEEE
Q 015758 381 TIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 381 ~ill~~~G~G~s~~a~llr 399 (401)
+.+....|.|..-++++|+
T Consensus 367 ~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 367 YGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred EEEEEEcccccceEEEEEE
Confidence 7888889999888888886
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-18 Score=163.50 Aligned_cols=276 Identities=17% Similarity=0.205 Sum_probs=186.7
Q ss_pred ccCCeEEEEEEEEcCCCccChHHHHhhhCC--chhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEE
Q 015758 64 INRGCKLVGCGSAVPTLQISNDDLAKIVDT--SDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLV 141 (401)
Q Consensus 64 ~~~~v~I~gig~~lP~~~v~~~~l~~~~~~--~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~l 141 (401)
...+++|++.++.+-+.. .+--|.+.|+. .|.++ .++.+ +....+|+.+|+++||+++|++++|||++
T Consensus 12 f~~~p~i~~~~~~~g~~E-~~gpl~~~fd~~~~d~~~------Ge~sw---EkAeseLa~eAa~~ALekAGI~~~DID~l 81 (337)
T PRK08304 12 FENPPYIISTGTIVGPKE-GEGPLGKYFDKILDDDYC------GEKSW---EKAERKMMEDAIQQALQKANLKKSDIDYL 81 (337)
T ss_pred ecCCCEEEEEEEEecCcc-cCCCChhhCCeEeccccc------CCcCc---cccHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 356789999999987654 33344444432 22222 22322 45789999999999999999999999999
Q ss_pred EEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC---CCC-----
Q 015758 142 LMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF---TDW----- 213 (401)
Q Consensus 142 i~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~---~~~----- 213 (401)
|+++. ..+ ...+..+++.||+ +++++..+|+++..+|.+|..+|++|.+++|||++++.++.. +++
T Consensus 82 I~Gdl-l~Q-~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~P~eyg 155 (337)
T PRK08304 82 LAGDL-LNQ-IISANFAARELGI----PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRFPTEYG 155 (337)
T ss_pred EEECC-CCC-cchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccCchhcc
Confidence 99875 222 2468899999997 589999999999999999999999999999999999998843 332
Q ss_pred -CCCCccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEch
Q 015758 214 -TDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNG 292 (401)
Q Consensus 214 -~dr~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g 292 (401)
..+.+...++|||+|+||++... .+.+-.. +.| ..+++-.+.. ++|-.
T Consensus 156 ~qrp~taqwtvtGAGA~i~~~~~~-~~~i~~~---t~G-----------------------kv~D~g~~d~----~nmga 204 (337)
T PRK08304 156 GQRPPTAQWTVTGAGAVLLSREGS-GPRITHA---TIG-----------------------KVVDLGIKDP----NDMGA 204 (337)
T ss_pred ccCCCcceEEeeccEEEEEecCCC-CceEEEE---eEE-----------------------EEEecCCCCc----ccchh
Confidence 12345678999999999987531 2222221 222 1111111110 22311
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecc---cCHHHHHHHHHHcCCCchhhh-h--------ccc--ccCcc
Q 015758 293 KEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQ---ANQRIIDAVANRLDVPMERVI-S--------NLA--NYGNT 358 (401)
Q Consensus 293 ~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq---~~~~i~~~i~~~lgl~~e~~~-~--------~l~--~~Gn~ 358 (401)
. ......+.|.+.|++.|.+++|.|.++.-- .+.+|+..+.++-|++.++.+ + .-+ .-|-.
T Consensus 205 -a----MapAa~dti~~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgS 279 (337)
T PRK08304 205 -A----MAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGS 279 (337)
T ss_pred -h----hhHHHHHHHHHHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCc
Confidence 1 123455788899999999999999999754 567888888888888876443 1 011 22444
Q ss_pred ccChHHHHHHHHHHcCCCCCC--CEEEEEeeehhhh
Q 015758 359 SAASIPLALDEAVRSGKVKPG--HTIAAAGFGAGLT 392 (401)
Q Consensus 359 ~sasi~~~L~~~l~~g~~~~G--d~ill~~~G~G~s 392 (401)
||+...+.+.-.+-+ +++.| .+||+++.|+=+|
T Consensus 280 Gc~csa~v~~~~~~~-~~~~g~~~rvl~v~tGaLls 314 (337)
T PRK08304 280 GCACSAVVTYGYLLK-ELQKGKLKRVLVVATGALLS 314 (337)
T ss_pred ccchhHHHHHHHHHH-HHhcCCceEEEEEEchhhcC
Confidence 555444444333321 34444 4799999997544
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=173.55 Aligned_cols=249 Identities=19% Similarity=0.158 Sum_probs=180.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+++..+|+.+|++++|+++|++|++||.||++++++.... ..+..++..+|++...++++|+++|+|++.++..|.++
T Consensus 22 ~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~~Casg~~ai~~A~~~ 101 (393)
T PRK05656 22 ANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecccchhHHHHHHHHHHH
Confidence 46789999999999999999999999999999998764322 35778999999964489999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC--CC---------------------C-CCCC------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSR--FT---------------------D-WTDR------------------------------ 216 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~--~~---------------------~-~~dr------------------------------ 216 (401)
|++|.++.+||+++|.+|+ +. + +.+.
T Consensus 102 I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~ 181 (393)
T PRK05656 102 IRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAA 181 (393)
T ss_pred HHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999997764 10 0 0000
Q ss_pred ---------------C--c---------------------------------------ccc-------ccceeEEEEEee
Q 015758 217 ---------------G--S---------------------------------------CIL-------FGDAAGAVLVQA 233 (401)
Q Consensus 217 ---------------~--~---------------------------------------~~l-------fGDGAaAvll~~ 233 (401)
. . +.+ ++|||+|+||++
T Consensus 182 sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~~~~s~~~DGAaa~vl~s 261 (393)
T PRK05656 182 SQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMS 261 (393)
T ss_pred HHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEccccCCCCCceEEEEEec
Confidence 0 0 002 567777777765
Q ss_pred ccCC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHH
Q 015758 234 CDSE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESAL 311 (401)
Q Consensus 234 ~~~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL 311 (401)
.+.. +.|.-. ..+...+.. +. .|. .. ......+++++|
T Consensus 262 ~~~A~~~g~~~~a~i~g~~~~--------------------~~---~~~--------------~~---~~~~~~a~~~al 301 (393)
T PRK05656 262 AAKAKALGLPVLAKIAAYANA--------------------GV---DPA--------------IM---GIGPVSATRRCL 301 (393)
T ss_pred HHHHHHCCCCeeEEEEEEEEe--------------------cC---CCc--------------cc---chhHHHHHHHHH
Confidence 4311 111100 001100000 00 000 00 012347899999
Q ss_pred HHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeeh
Q 015758 312 EKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGA 389 (401)
Q Consensus 312 ~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~ 389 (401)
+++|++++|||++.+|-........+.+.||++.++++. ..-.+||+..|+-...+.+++.+-+.+.|.+.+...+..
T Consensus 302 ~~agl~~~dId~~e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~~~gl~~~c~~ 381 (393)
T PRK05656 302 DKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIG 381 (393)
T ss_pred HHcCCCHHHCCEEEecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCCCEEEEEEccc
Confidence 999999999999999998777777888999998777653 334789999998888888888765556667778888888
Q ss_pred hhhheeeEEEe
Q 015758 390 GLTWGSAILRW 400 (401)
Q Consensus 390 G~s~~a~llr~ 400 (401)
|..-++++|+.
T Consensus 382 gG~g~a~~~e~ 392 (393)
T PRK05656 382 GGQGVALAIER 392 (393)
T ss_pred CcceEEEEEec
Confidence 88888888875
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=171.69 Aligned_cols=249 Identities=22% Similarity=0.217 Sum_probs=176.7
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-C-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-F-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
.+++..+|+.+|++++|+++|++|+|||.||+++++++.. + ..+..++..+|++.+.++++|+++|+||+.++..|.+
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~ 102 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQ 102 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecccchHHHHHHHHHHH
Confidence 4678999999999999999999999999999999887553 2 2456667778996568999999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCC----C-------------------CCCCC-----------------------------
Q 015758 190 HIRGGGFRNVLVIGGDALSRFT----D-------------------WTDRG----------------------------- 217 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~~----~-------------------~~dr~----------------------------- 217 (401)
+|++|.++.+||+++|.+|+.. . +.+..
T Consensus 103 ~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~avk 182 (394)
T PRK09051 103 AILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQDALALE 182 (394)
T ss_pred HHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999999887420 0 00000
Q ss_pred --------------------------------c-----------------cccc---------------cceeEEEEEee
Q 015758 218 --------------------------------S-----------------CILF---------------GDAAGAVLVQA 233 (401)
Q Consensus 218 --------------------------------~-----------------~~lf---------------GDGAaAvll~~ 233 (401)
+ -.+| +|||+|+||++
T Consensus 183 sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~~~s~~~DGAaa~vl~s 262 (394)
T PRK09051 183 SHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAE 262 (394)
T ss_pred HHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeCCcCCCCCCceEEEEEec
Confidence 0 0112 35555555554
Q ss_pred ccCC-CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHH
Q 015758 234 CDSE-DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESAL 311 (401)
Q Consensus 234 ~~~~-~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL 311 (401)
++.. +.+.-.. .+...+.. + ..+. ..+ .....+++++|
T Consensus 263 ~~~a~~~g~~~~~~I~g~~~~--------------------~----~~~~--------~~~--------~~~~~a~~~al 302 (394)
T PRK09051 263 ADAAEARGLKPLARLVGYAHA--------------------G----VDPE--------YMG--------IGPVPATQKAL 302 (394)
T ss_pred HHHHHHCCCCccEEEEEEEEe--------------------c----cCCC--------ccc--------ccHHHHHHHHH
Confidence 3210 0010000 00000000 0 0000 000 12347889999
Q ss_pred HHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhccc--ccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeeh
Q 015758 312 EKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLA--NYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGA 389 (401)
Q Consensus 312 ~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~ 389 (401)
+++|++++|||++-+|-........+.+.||+.+++++.+-. -+||...|+-...+.+++++-+-+.|.+.+...+..
T Consensus 303 ~~agi~~~did~~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~~~g~~~~c~~ 382 (394)
T PRK09051 303 ERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGGRYALVTMCIG 382 (394)
T ss_pred HHcCCCHHHcCEEEecCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCCCEEEEEEccc
Confidence 999999999999999998777777788999999888765433 589999988888888888764445566778877888
Q ss_pred hhhheeeEEEe
Q 015758 390 GLTWGSAILRW 400 (401)
Q Consensus 390 G~s~~a~llr~ 400 (401)
|..-.+++++.
T Consensus 383 gG~g~a~~~e~ 393 (394)
T PRK09051 383 GGQGIAAIFER 393 (394)
T ss_pred cChhhEEEEEe
Confidence 88888888875
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-18 Score=171.32 Aligned_cols=261 Identities=19% Similarity=0.180 Sum_probs=180.5
Q ss_pred hhcCcceeEec-CCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-c-hHHHHHHHcCCCCCCeeEeeCcc
Q 015758 100 VRTGIRNRRVL-SGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-G-GATQIPKALGCKNNPLAYDITAA 176 (401)
Q Consensus 100 ~~~Gi~~R~~~-~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~-~a~~i~~~lGl~~~~~~~~i~~~ 176 (401)
.+|+|.+|+.. ..+++..+|+.+|++++|+++|++|++||.||+++.+++... . .+..++..+|++.+.++++|+++
T Consensus 10 ~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~a 89 (392)
T PRK07108 10 ARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRF 89 (392)
T ss_pred ccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeecch
Confidence 35666665332 256789999999999999999999999999999998877653 3 68899999999756999999999
Q ss_pred ChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC---------C----------CCC----------------------
Q 015758 177 CSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT---------D----------WTD---------------------- 215 (401)
Q Consensus 177 C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~---------~----------~~d---------------------- 215 (401)
|+|++.||.+|.++|++|.++.+|++++|.+|+.. . |..
T Consensus 90 CaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~~~d~~ 169 (392)
T PRK07108 90 CSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKERQDEY 169 (392)
T ss_pred hhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999999999999999999987420 0 000
Q ss_pred --------------------------------C--C---------------------------------------ccccc
Q 015758 216 --------------------------------R--G---------------------------------------SCILF 222 (401)
Q Consensus 216 --------------------------------r--~---------------------------------------~~~lf 222 (401)
+ . ++...
T Consensus 170 a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~n~~~~ 249 (392)
T PRK07108 170 GVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAGNASQF 249 (392)
T ss_pred HHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCCcCCCC
Confidence 0 0 00112
Q ss_pred cceeEEEEEeeccCC-CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHH
Q 015758 223 GDAAGAVLVQACDSE-DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300 (401)
Q Consensus 223 GDGAaAvll~~~~~~-~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~ 300 (401)
+|||+|+||++.+.. +.+.-.. .+...+ . . ....... .
T Consensus 250 ~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~-----------------------~-------------~-~~~~~~~---~ 289 (392)
T PRK07108 250 SDGASACVVMNAKVAEREGLQPLGIFRGFA-----------------------V-------------A-GCEPDEM---G 289 (392)
T ss_pred CCceEEEEEecHHHHHHCCCCceEEEEEEE-----------------------E-------------e-ccCCccc---c
Confidence 344444444432210 0000000 000000 0 0 0000000 0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKP 378 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~ 378 (401)
.....+++++|+++|++++|||++-+|-......-...+.||+.+++++.+ .--+||...++-...+.+++.+-+-+.
T Consensus 290 ~~~~~a~~~al~~agl~~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~~ 369 (392)
T PRK07108 290 IGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRG 369 (392)
T ss_pred hhHHHHHHHHHHHcCCCHHHcCchHhhhHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhhC
Confidence 123478999999999999999999999877666666778999998887643 347899988887777666665433345
Q ss_pred CCEEEEEeeehhhhheeeEEEe
Q 015758 379 GHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 379 Gd~ill~~~G~G~s~~a~llr~ 400 (401)
|.+.+...++.|..-.++++++
T Consensus 370 ~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 370 AKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred CCEEEEEEccccChhhEEEEEe
Confidence 5677777788888888888875
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-17 Score=167.43 Aligned_cols=294 Identities=16% Similarity=0.231 Sum_probs=188.8
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCCc-------hhhhhh----h-c----CcceeEecC-----CCCCHHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDTS-------DEWISV----R-T----GIRNRRVLS-----GKESLTGLAVEAAS 125 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~~-------~~~i~~----~-~----Gi~~R~~~~-----~~e~~~~la~~Aa~ 125 (401)
.|.|+|+|...|.-. +.+++++.+..- +.|... . . .+..+.+.. .-+...+|+.+|++
T Consensus 2 ~v~ItG~g~~~p~g~-~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (407)
T TIGR03150 2 RVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred cEEEEcceEECCCcC-CHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 579999999999875 778887754211 011000 0 0 000000000 01245789999999
Q ss_pred HHHHhCCCCcCCCCE----EEEEecCCCC----------------------CC----c-hHHHHHHHcCCCCCCeeEeeC
Q 015758 126 RALQMAEVNPEDVDL----VLMCTSTPED----------------------LF----G-GATQIPKALGCKNNPLAYDIT 174 (401)
Q Consensus 126 ~aL~~agi~~~~Id~----li~~t~~~~~----------------------~~----~-~a~~i~~~lGl~~~~~~~~i~ 174 (401)
+||+++|++++++|. ++++++.+.. .. . .+.+|+..+|+ +.+.+.+.
T Consensus 81 ~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl--~g~~~~v~ 158 (407)
T TIGR03150 81 EAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA--KGPNHAVV 158 (407)
T ss_pred HHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC--CCcccccc
Confidence 999999999999886 6666543210 00 1 25679999999 37889999
Q ss_pred ccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CC-----------C-CCCCCccccccceeEEEEE
Q 015758 175 AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FT-----------D-WTDRGSCILFGDAAGAVLV 231 (401)
Q Consensus 175 ~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~-----------~-~~dr~~~~lfGDGAaAvll 231 (401)
.+|++++.||..|.++|++|.++.+||+++|.+.. .+ + +..+..++++||||+|+||
T Consensus 159 ~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAaalvL 238 (407)
T TIGR03150 159 TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVL 238 (407)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEEEEEE
Confidence 99999999999999999999999999999996321 00 0 1112245789999999999
Q ss_pred eeccC-CCCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHH
Q 015758 232 QACDS-EDDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIE 308 (401)
Q Consensus 232 ~~~~~-~~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~ 308 (401)
++.+. .+.| ++. .+...+...+ +.....|. . ++ ....++++
T Consensus 239 ~~~~~A~~~g~~i~a-~i~g~~~~~d------------------~~~~~~~~-~--------~~--------~~~~~ai~ 282 (407)
T TIGR03150 239 EELEHAKARGAKIYA-EIVGYGMSGD------------------AYHITAPA-P--------EG--------EGAARAMR 282 (407)
T ss_pred eeHHHHHHCCCeEEE-EEEEEEECCC------------------CCCCCCCC-C--------Cc--------HHHHHHHH
Confidence 97542 1222 211 1111111000 00000010 0 01 23458899
Q ss_pred HHHHHcCCCcCCcCEEEecccCHHH-----HHHHHHHcCCCchhhh--hcccccCccccChHHHHHHHH---HHcCCCC-
Q 015758 309 SALEKAGLTMSSIDWLLLHQANQRI-----IDAVANRLDVPMERVI--SNLANYGNTSAASIPLALDEA---VRSGKVK- 377 (401)
Q Consensus 309 ~aL~~agl~~~dId~~i~Hq~~~~i-----~~~i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~---l~~g~~~- 377 (401)
++|+++|++++|||++.+|..+... ...+.+.++-...++. .....+||+.+|+-.+.+..+ ++++.+.
T Consensus 283 ~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp 362 (407)
T TIGR03150 283 AALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPP 362 (407)
T ss_pred HHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCC
Confidence 9999999999999999999988744 4446667775433443 345678999888777665554 3333211
Q ss_pred -----------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 378 -----------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 378 -----------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+-.+++..+||.|.+..+++|+
T Consensus 363 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 363 TINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 1246788999999999998874
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-18 Score=162.12 Aligned_cols=170 Identities=21% Similarity=0.241 Sum_probs=141.2
Q ss_pred CeEEEEEEEEcCCC--ccChHHHHhhhCCc----------hhhhhhhcCcceeEecCCC--------------CCHHHHH
Q 015758 67 GCKLVGCGSAVPTL--QISNDDLAKIVDTS----------DEWISVRTGIRNRRVLSGK--------------ESLTGLA 120 (401)
Q Consensus 67 ~v~I~gig~~lP~~--~v~~~~l~~~~~~~----------~~~i~~~~Gi~~R~~~~~~--------------e~~~~la 120 (401)
+|+++...+|-|+. +++.+.+.+..... -++|.++.|+.++.+..+. +....+.
T Consensus 8 ~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~~Eae~v~ 87 (290)
T PF08392_consen 8 PVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAREEAEMVI 87 (290)
T ss_pred CEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHHHHHHHHH
Confidence 79999999999976 58889888765321 1456789999999886431 1245677
Q ss_pred HHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHHcCCCCeE
Q 015758 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNV 199 (401)
Q Consensus 121 ~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~~g~~~~v 199 (401)
..|++++|+++|++|+|||.||+.+++....++.+.+|..++|++.+...++++ +||++++.+|++|+++++..+..++
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~A 167 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYA 167 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEE
Confidence 899999999999999999999999988766667899999999999899999996 8999999999999999999999999
Q ss_pred EEEEeccCCCC-CCCCCCC---ccccccceeEEEEEeeccC
Q 015758 200 LVIGGDALSRF-TDWTDRG---SCILFGDAAGAVLVQACDS 236 (401)
Q Consensus 200 Lvv~~d~~s~~-~~~~dr~---~~~lfGDGAaAvll~~~~~ 236 (401)
|||+.|.++.. ..-+||. +..+|+||++|+||++.+.
T Consensus 168 LVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 168 LVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred EEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence 99999999853 2223442 3469999999999998664
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=167.84 Aligned_cols=289 Identities=20% Similarity=0.199 Sum_probs=189.0
Q ss_pred CeEEEEEEEEcCCCcc--ChHHHHhhhCCchhhhhh-----------hcC------cceeEecCCC---CCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQI--SNDDLAKIVDTSDEWISV-----------RTG------IRNRRVLSGK---ESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v--~~~~l~~~~~~~~~~i~~-----------~~G------i~~R~~~~~~---e~~~~la~~Aa 124 (401)
.|.|.|+|...|...- +.+++++.+-.-..-+.. ..| +..+. ...- +....|+.+|+
T Consensus 2 ~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~g~i~~~~~~~~~-~~~~~~~~~~~~l~~~aa 80 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRFDRGVAGQIPTGDIPGWD-AKRTGIVDRTTLLALVAT 80 (407)
T ss_pred CEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCcccccCCccEEEEccCCCcCHHH-HHhccCCCHHHHHHHHHH
Confidence 4789999999997662 267776654211100000 000 00000 0011 46788999999
Q ss_pred HHHHHhCCCCcCC-CC----EEEEEecCCC----------------------CCC--c-hHHHHHHHcCCCCCCeeEeeC
Q 015758 125 SRALQMAEVNPED-VD----LVLMCTSTPE----------------------DLF--G-GATQIPKALGCKNNPLAYDIT 174 (401)
Q Consensus 125 ~~aL~~agi~~~~-Id----~li~~t~~~~----------------------~~~--~-~a~~i~~~lGl~~~~~~~~i~ 174 (401)
++||+++|+++++ ++ .++++++.+. ... . .+.+|+..+|+. ..+.+.+.
T Consensus 81 ~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~-~Gp~~tv~ 159 (407)
T cd00828 81 EEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSS-HGPIKTPV 159 (407)
T ss_pred HHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCcC-CCCCcCcc
Confidence 9999999998766 43 3555554321 111 2 367899999993 47899999
Q ss_pred ccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC---------------------CCCC-CCCCccccccceeEEEEEe
Q 015758 175 AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR---------------------FTDW-TDRGSCILFGDAAGAVLVQ 232 (401)
Q Consensus 175 ~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~---------------------~~~~-~dr~~~~lfGDGAaAvll~ 232 (401)
++|++++.||..|.++|++|+++.+||+++|..+. ..++ ..+..++++||||+++||+
T Consensus 160 ~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~G~~~gEGAaalvLe 239 (407)
T cd00828 160 GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEGAGVLVLE 239 (407)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCCCcEEeecceEEEEEe
Confidence 99999999999999999999999999999998651 1111 1223567899999999999
Q ss_pred eccC-CCCC--eeE----EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHH
Q 015758 233 ACDS-EDDG--LIS----FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305 (401)
Q Consensus 233 ~~~~-~~~g--l~~----~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~ 305 (401)
+.+. .+.| ++. +...+++ .....+. + .+.+.+
T Consensus 240 ~~~~A~~rg~~i~a~i~g~~~~~d~-----------------------~~~~~~~----------~--------~~~~~~ 278 (407)
T cd00828 240 RAELALARGAPIYGRVAGTASTTDG-----------------------AGRSVPA----------G--------GKGIAR 278 (407)
T ss_pred eHHHHHHCCCeEEEEEEEEEeccCC-----------------------CCCCCCC----------C--------hHHHHH
Confidence 8542 1122 221 1111111 0000010 0 134568
Q ss_pred HHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCC--chhhhhcccccCccccChHHHHHHHHH---HcCC
Q 015758 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVP--MERVISNLANYGNTSAASIPLALDEAV---RSGK 375 (401)
Q Consensus 306 ~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~--~e~~~~~l~~~Gn~~sasi~~~L~~~l---~~g~ 375 (401)
+++++|+++|++++|||++..|..+....|. +.+.++-. +-.+..+...+||+.+|+.++.|...+ +++.
T Consensus 279 a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ 358 (407)
T cd00828 279 AIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGL 358 (407)
T ss_pred HHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCc
Confidence 9999999999999999999999888765543 34444432 223446778999999999888876543 3332
Q ss_pred CC----------------------C----CCEEEEEeeehhhhheeeEE
Q 015758 376 VK----------------------P----GHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 376 ~~----------------------~----Gd~ill~~~G~G~s~~a~ll 398 (401)
+. + -.+++..+||.|.+..++++
T Consensus 359 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 359 IPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred cCCCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 21 1 15788999999999888774
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-17 Score=168.28 Aligned_cols=293 Identities=21% Similarity=0.248 Sum_probs=186.4
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhC--Cc-----hhhhhhhcCcceeE-----ec-----CCCCCHHHHHHHHHHHH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVD--TS-----DEWISVRTGIRNRR-----VL-----SGKESLTGLAVEAASRA 127 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~--~~-----~~~i~~~~Gi~~R~-----~~-----~~~e~~~~la~~Aa~~a 127 (401)
.|.|.|.|+|...|--. +.+++++.+- .+ .+|-. .++..+. +. ........++..|+++|
T Consensus 10 ~~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~aa~~A 86 (425)
T PRK06501 10 RPIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPT--EGLRTRIAGTVDFLPESPFGASALSEALARLAAEEA 86 (425)
T ss_pred CcCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccc--cCCCCceEEEEeecccccccccCHHHHHHHHHHHHH
Confidence 46799999999999876 6777776542 11 11100 0111100 00 01123567899999999
Q ss_pred HHhCCCCcCCCC------------------EEEEEecC---------------CCC-------CC-chHHHHHHHcCCCC
Q 015758 128 LQMAEVNPEDVD------------------LVLMCTST---------------PED-------LF-GGATQIPKALGCKN 166 (401)
Q Consensus 128 L~~agi~~~~Id------------------~li~~t~~---------------~~~-------~~-~~a~~i~~~lGl~~ 166 (401)
|+++|+++.+++ .++.++.. ++. .+ ..+.+|+..+|+
T Consensus 87 l~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl-- 164 (425)
T PRK06501 87 LAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGT-- 164 (425)
T ss_pred HHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCC--
Confidence 999999654322 12222211 111 11 247889999999
Q ss_pred CCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEecc---------------CCCCCCC---------CCCCccccc
Q 015758 167 NPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDA---------------LSRFTDW---------TDRGSCILF 222 (401)
Q Consensus 167 ~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~---------------~s~~~~~---------~dr~~~~lf 222 (401)
+.++++++.+|+|++.||..|.++|++|+++.+||+++|. ++...++ .++ ..+++
T Consensus 165 ~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r-~G~v~ 243 (425)
T PRK06501 165 RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDR-DGFVM 243 (425)
T ss_pred CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCC-CCeee
Confidence 3788999999999999999999999999999999999993 3322222 223 44899
Q ss_pred cceeEEEEEeeccC-CCCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHH
Q 015758 223 GDAAGAVLVQACDS-EDDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFA 299 (401)
Q Consensus 223 GDGAaAvll~~~~~-~~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~ 299 (401)
||||+++||++.+. .+.| ++......... .+. ... .+. .+++
T Consensus 244 GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~-~d~------------------~~~-~~~--------~~~~------- 288 (425)
T PRK06501 244 AEGAGALVLESLESAVARGAKILGIVAGCGEK-ADS------------------FHR-TRS--------SPDG------- 288 (425)
T ss_pred eccEEEEEECcHHHHHHCCCeEEEEEEEEEEc-cCC------------------CCC-CCC--------CCCH-------
Confidence 99999999998542 1223 43322211100 000 000 000 0111
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchhhh--hcccccCccccChHHHHHHH---
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMERVI--SNLANYGNTSAASIPLALDE--- 369 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~--- 369 (401)
..+.++++++|+++|++++|||++.+|..+....|.++ +.++-...++. .+...+||+.+|+-.+.+..
T Consensus 289 -~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 289 -SPAIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred -HHHHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHH
Confidence 24568899999999999999999999999877766543 44552222332 45568899988887766543
Q ss_pred HHHcCCCC------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 370 AVRSGKVK------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 370 ~l~~g~~~------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
.++++.+. +-+.++..+||.|.+..+++|+
T Consensus 368 ~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~ 421 (425)
T PRK06501 368 TIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLT 421 (425)
T ss_pred HHhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEe
Confidence 34444321 1245678899999999999986
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=157.28 Aligned_cols=305 Identities=18% Similarity=0.224 Sum_probs=207.6
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEec
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTS 146 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 146 (401)
.++|+++-.|+|.+.|+++|++++-+.+...+.--.|...--++.+.|+...|...+.++++|+-+|+++.|+.|-++|.
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTE 90 (462)
T KOG1393|consen 11 DVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTE 90 (462)
T ss_pred ccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEEecce
Confidence 68999999999999999999999877666555545566677788888999999999999999999999999999999998
Q ss_pred CCCCCC-chHHHHHHHcC--CCCCCeeEeeCccChHHHHHHHHHHHHHHcC--CCCeEEEEEeccCCCCCCCCCCCcccc
Q 015758 147 TPEDLF-GGATQIPKALG--CKNNPLAYDITAACSGFLLGLVSAACHIRGG--GFRNVLVIGGDALSRFTDWTDRGSCIL 221 (401)
Q Consensus 147 ~~~~~~-~~a~~i~~~lG--l~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g--~~~~vLvv~~d~~s~~~~~~dr~~~~l 221 (401)
|-.+-. +.-..+++.++ -..+...+|..++|.|+..||..|..+|++. ..+.+|||++|..- |.+-.....
T Consensus 91 TiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAv----Y~~G~aRpT 166 (462)
T KOG1393|consen 91 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAV----YAKGNARPT 166 (462)
T ss_pred eccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEE----ecCCCCCCC
Confidence 765544 44456666665 3356788999999999999999999999986 46899999999853 111112235
Q ss_pred ccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 222 FGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 222 fGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
=|-||.|+||+.+.. +.++-...+....|.. .|+.++.. + .+|. .+|+.-.+..+.
T Consensus 167 GGAgAVAmLIgPnAp-----i~ferglr~thM~hay-DFyKPdl~-------S--EyPv---------VDGklSi~cYl~ 222 (462)
T KOG1393|consen 167 GGAGAVAMLIGPNAP-----IIFERGLRATHMQHAY-DFYKPDLL-------S--EYPV---------VDGKLSIQCYLS 222 (462)
T ss_pred CCcceEEEEEcCCCc-----eEecccchhhhhhhhh-hccCCCCC-------C--cCce---------ecCeehHHHHHH
Confidence 588999999987431 1222211222111111 11111110 0 1222 234322221211
Q ss_pred H--------HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHc--------------------------------
Q 015758 302 V--------VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRL-------------------------------- 341 (401)
Q Consensus 302 ~--------~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~l-------------------------------- 341 (401)
. -.+..++-.+..+...+++|++++|.+..++.+.-..+|
T Consensus 223 Ald~cY~~~~kK~~~~~~~~~~~~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~ 302 (462)
T KOG1393|consen 223 ALDRCYTVYRKKIAAQWQKSGSDNLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRD 302 (462)
T ss_pred HHHHHHHHHHHHHHHHhccccCcccccCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchH
Confidence 1 122333334444666789999999999988876522111
Q ss_pred ----------CCCchhhhhc--c-cccCccccChHHHHHHHHHHcC--CCCCCCEEEEEeeehhhhheeeEEE
Q 015758 342 ----------DVPMERVISN--L-ANYGNTSAASIPLALDEAVRSG--KVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 342 ----------gl~~e~~~~~--l-~~~Gn~~sasi~~~L~~~l~~g--~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+-.+|+... + .+.||+.++|+...|..++... .--.|.+|.++++|+|++....-+|
T Consensus 303 ~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~ 375 (462)
T KOG1393|consen 303 LEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLR 375 (462)
T ss_pred HHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEE
Confidence 0111122211 1 3889999999999999999875 2336999999999999987665554
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=166.78 Aligned_cols=247 Identities=23% Similarity=0.200 Sum_probs=174.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
+++..+|+.+|+++||+++|++++|||.|++++.+++... ..+..++..+|++.+.++++++++|++++.+|..|.++|
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLI 97 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecchhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999887765433 347789999999645889999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCCC-------------------CC------C-------------------------------
Q 015758 192 RGGGFRNVLVIGGDALSRFTD-------------------WT------D------------------------------- 215 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~~~-------------------~~------d------------------------------- 215 (401)
++|.+++|||+++|.+++... |. +
T Consensus 98 ~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~la~vav~ 177 (386)
T TIGR01930 98 RAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENLAKKYGISREEQDEYALR 177 (386)
T ss_pred HCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999999999999997653210 00 0
Q ss_pred -------------------CC------------------------------------------ccccccceeEEEEEeec
Q 015758 216 -------------------RG------------------------------------------SCILFGDAAGAVLVQAC 234 (401)
Q Consensus 216 -------------------r~------------------------------------------~~~lfGDGAaAvll~~~ 234 (401)
+. .+..++|||+|+||++.
T Consensus 178 ~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~~~~dGAaa~vl~s~ 257 (386)
T TIGR01930 178 SHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSE 257 (386)
T ss_pred HHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccCCCCcceeEEEEecH
Confidence 00 00112566666666653
Q ss_pred cCC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHH
Q 015758 235 DSE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALE 312 (401)
Q Consensus 235 ~~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~ 312 (401)
+.. +.+.-. ..+...+.. + ..|. . + ......+++++|+
T Consensus 258 ~~A~~~~~~~~~~i~g~g~~--------------------~---~~~~-------------~-~---~~~~~~a~~~a~~ 297 (386)
T TIGR01930 258 ERAKELGLTPLARIVSFAVA--------------------G---VDPE-------------I-M---GLGPVPAIPKALK 297 (386)
T ss_pred HHHHHCCCCccEEEEEEEEe--------------------c---CCCc-------------c-c---cccHHHHHHHHHH
Confidence 310 001000 000000000 0 0000 0 0 0122478899999
Q ss_pred HcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehh
Q 015758 313 KAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAG 390 (401)
Q Consensus 313 ~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G 390 (401)
++|++++|||++-+|-......-...+.||+....++.+ .--+||+..++-...+.+++.+-+-+.+.+.|..+++.|
T Consensus 298 ~Agi~~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~g 377 (386)
T TIGR01930 298 KAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGG 377 (386)
T ss_pred HcCCCHHHCCeeehcchhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccC
Confidence 999999999999999988777677788999876555433 337899999999888888887633345678888888888
Q ss_pred hhheeeEEE
Q 015758 391 LTWGSAILR 399 (401)
Q Consensus 391 ~s~~a~llr 399 (401)
..-.+++++
T Consensus 378 G~g~~~~~e 386 (386)
T TIGR01930 378 GQGIAVILE 386 (386)
T ss_pred CceEEEEeC
Confidence 877777764
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=169.13 Aligned_cols=246 Identities=22% Similarity=0.237 Sum_probs=165.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCcCCCCE----EEEEecCCCC-------------------CC-chHHHHHHHcCCCCCCee
Q 015758 115 SLTGLAVEAASRALQMAEVNPEDVDL----VLMCTSTPED-------------------LF-GGATQIPKALGCKNNPLA 170 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~~~~Id~----li~~t~~~~~-------------------~~-~~a~~i~~~lGl~~~~~~ 170 (401)
+...|+.+|+++||+++|+++++++. +++++..+++ .. ..+..++..+|++ .+.
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 46899999999999999999888774 6767654321 01 1367899999993 689
Q ss_pred EeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------------CCC-CCCCCccccccceeEEEEEe
Q 015758 171 YDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------------FTD-WTDRGSCILFGDAAGAVLVQ 232 (401)
Q Consensus 171 ~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------------~~~-~~dr~~~~lfGDGAaAvll~ 232 (401)
+++.++|++++.||..|.++|++|.++.+||+++|.... ..+ +..+...+++||||+|+||+
T Consensus 164 ~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalvL~ 243 (421)
T cd00833 164 LTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLK 243 (421)
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEEEEe
Confidence 999999999999999999999999999999999997531 011 22233467899999999999
Q ss_pred eccCC-CCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHH
Q 015758 233 ACDSE-DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIES 309 (401)
Q Consensus 233 ~~~~~-~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~ 309 (401)
+.+.. +.+ +.. .+...+... .+...... ..+ ...+.+++++
T Consensus 244 ~~~~A~~~g~~~~a-~i~g~~~~~------------------~~~~~~~~---------~p~--------~~~~~~a~~~ 287 (421)
T cd00833 244 RLSDALRDGDRIYA-VIRGSAVNQ------------------DGRTKGIT---------APS--------GEAQAALIRR 287 (421)
T ss_pred eHHHHHHCCCeEEE-EEEEEEEcC------------------CCCCCCCc---------CCC--------HHHHHHHHHH
Confidence 85421 122 111 111100000 00000000 000 1345689999
Q ss_pred HHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCc---hhh--hhcccccCccccChHHHHHHHHH---HcCCC
Q 015758 310 ALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPM---ERV--ISNLANYGNTSAASIPLALDEAV---RSGKV 376 (401)
Q Consensus 310 aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~---e~~--~~~l~~~Gn~~sasi~~~L~~~l---~~g~~ 376 (401)
+|+++|++++|||++.+|..+....| .+.+.++-.. ..+ ......+||+.+|+-.+.|...+ +++.+
T Consensus 288 al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~i 367 (421)
T cd00833 288 AYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVI 367 (421)
T ss_pred HHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCc
Confidence 99999999999999999998865443 3444443221 122 24556899999998777665433 32211
Q ss_pred -----------------------------C---CCCEEEEEeeehhhhheeeEE
Q 015758 377 -----------------------------K---PGHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 377 -----------------------------~---~Gd~ill~~~G~G~s~~a~ll 398 (401)
+ ....++..+||.|....++++
T Consensus 368 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 368 PPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CCcCCCCCCCCCCCcccCCeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 1 136788899999999888774
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=165.84 Aligned_cols=248 Identities=18% Similarity=0.156 Sum_probs=174.0
Q ss_pred CCCHHHHHHHHHHHHHHhC-CCCcCCCCEEEEEecCCCCCC-chHHH-HHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMA-EVNPEDVDLVLMCTSTPEDLF-GGATQ-IPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~~~~~~~-~~a~~-i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
+++..+|+.+|++++|+++ |++++|||.||+++++++... ....+ +...+|++...++++|+++|+|++.++..|.+
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~ 107 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAAD 107 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHH
Confidence 6789999999999999997 999999999999998876543 34444 55666996448899999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCC--------C---CC-CC-----------------------------------------
Q 015758 190 HIRGGGFRNVLVIGGDALSRFT--------D---WT-DR----------------------------------------- 216 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~~--------~---~~-dr----------------------------------------- 216 (401)
+|++|.++.|||+++|.+|... . +. +.
T Consensus 108 ~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~ 187 (399)
T PRK09052 108 RIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQ 187 (399)
T ss_pred HHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999886321 0 00 00
Q ss_pred ---------------Cc------------------------------------------------cccccceeEEEEEee
Q 015758 217 ---------------GS------------------------------------------------CILFGDAAGAVLVQA 233 (401)
Q Consensus 217 ---------------~~------------------------------------------------~~lfGDGAaAvll~~ 233 (401)
.. +..++|||+|+||++
T Consensus 188 ~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl~s 267 (399)
T PRK09052 188 QAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVS 267 (399)
T ss_pred HcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEECCccCCCCCceEEEEEec
Confidence 00 012356666666665
Q ss_pred ccCC-CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHH
Q 015758 234 CDSE-DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESAL 311 (401)
Q Consensus 234 ~~~~-~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL 311 (401)
.+.. +.|.-.. .+...+.. + ..|. ..+ .....+++++|
T Consensus 268 e~~a~~~g~~~~a~i~g~~~~--------------------~---~~~~---------~~~--------~~~~~A~~~al 307 (399)
T PRK09052 268 EKALKQFNLTPLARFVSFAVA--------------------G---VPPE---------IMG--------IGPIEAIPAAL 307 (399)
T ss_pred HHHHHHCCCCeeEEEEEEEEe--------------------c---cCCC---------ccc--------hhHHHHHHHHH
Confidence 3310 1110000 11000000 0 0000 000 12347889999
Q ss_pred HHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhccc--ccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeeh
Q 015758 312 EKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLA--NYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGA 389 (401)
Q Consensus 312 ~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~ 389 (401)
+++|++++|||++-+|-......-...+.||+.+.+++.+-. -+||+..++-.+.+.+++.+-+-+.+.+.+...++.
T Consensus 308 ~~Agi~~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~~~g~~~~c~~ 387 (399)
T PRK09052 308 KQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKYGMVTMCVG 387 (399)
T ss_pred HHcCCCHHHcCEEEeCcHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence 999999999999999998777777778999998877765443 789999988888777777654334556777777888
Q ss_pred hhhheeeEEEe
Q 015758 390 GLTWGSAILRW 400 (401)
Q Consensus 390 G~s~~a~llr~ 400 (401)
|..-+++++++
T Consensus 388 gg~g~a~~~e~ 398 (399)
T PRK09052 388 TGMGAAGIFER 398 (399)
T ss_pred CCceeEEEEEe
Confidence 88878888864
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-17 Score=163.52 Aligned_cols=278 Identities=20% Similarity=0.176 Sum_probs=174.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC--chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 111 SGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF--GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 111 ~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~--~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
..+.++.+|+.+|++++|+++|++|++||.||+++.++.... ..+...+..+|++.+.++++|+++|+|++.||.+|.
T Consensus 23 l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaSg~~Ai~~A~ 102 (402)
T PRK08242 23 LHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAA 102 (402)
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEcchhhhHHHHHHHHH
Confidence 356789999999999999999999999999999999875432 246667788899767999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC----------C-CCC-CCcc-------------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT----------D-WTD-RGSC------------------------------------- 219 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~----------~-~~d-r~~~------------------------------------- 219 (401)
++|++|..+.+|++++|.+|+.. + +.+ ....
T Consensus 103 ~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~ 182 (402)
T PRK08242 103 AKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAVESQQRAAAAWA 182 (402)
T ss_pred HHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998531 1 000 0000
Q ss_pred -ccccceeE-------EEEEeeccCCCCC-----eeE----EE------------------------EeecCCCCCceee
Q 015758 220 -ILFGDAAG-------AVLVQACDSEDDG-----LIS----FD------------------------VHSDGEGGRHLNA 258 (401)
Q Consensus 220 -~lfGDGAa-------Avll~~~~~~~~g-----l~~----~~------------------------~~s~g~~~~~l~~ 258 (401)
-.|-|=-. ..++..++.-+.. +.. |. ..+-|+..
T Consensus 183 ~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s----- 257 (402)
T PRK08242 183 EGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSS----- 257 (402)
T ss_pred cCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccccCceecCcCC-----
Confidence 00100000 0223322210100 000 00 00000000
Q ss_pred eccCCCccccc------CCCCcccccCCC-CCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCH
Q 015758 259 CIKGNQTNDAL------GSNGSVLAFPPQ-HYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQ 331 (401)
Q Consensus 259 ~~~~~~~~~~~------~~~G~~~~~p~~-~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~ 331 (401)
+..+..-.-.+ ...|. -|.. -..+... ......+ ......+++++|+++|++++|||++-+|-...
T Consensus 258 ~~~DGAaAlvl~s~e~A~~~g~---~p~a~I~g~~~~-~~~~~~~---~~~~~~a~~~al~~AGl~~~DID~~ei~daFa 330 (402)
T PRK08242 258 GIVDGAAAVLIGSEEAGKALGL---KPRARIVATATI-GSDPTIM---LTGPVPATRKALAKAGLTVDDIDLFELNEAFA 330 (402)
T ss_pred CCCCceEEEEEecHHHHHHcCC---CCcEEEEEEEEe-cCCchhh---cccHHHHHHHHHHHcCCCHHHCCEEEecchhh
Confidence 00000000000 00000 0000 0000000 0000110 11223689999999999999999999999988
Q ss_pred HHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 332 RIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 332 ~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
...-...+.||+++++++.+ .--+||...++-...+.+++.+-+-+.|.+.+...+..|..-.+++++.
T Consensus 331 ~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 331 SVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERRGKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred HHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeEEEEEe
Confidence 88888899999998887643 3478999888888777777665443456677777777777778888874
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-17 Score=164.07 Aligned_cols=249 Identities=26% Similarity=0.209 Sum_probs=177.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+++..+|+.+|+++||+++|++++|||.|++++.++.... ..+..++..+|++.+.++++++++|++++.+|..|.++
T Consensus 22 ~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~~Casg~~al~~A~~~ 101 (393)
T PRK05790 22 KDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecccchHHHHHHHHHHHH
Confidence 36789999999999999999999999999999987653322 23555777789854578999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC------------------C---C---CC-------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFT------------------D---W---TD------------------------------- 215 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~------------------~---~---~d------------------------------- 215 (401)
|++|.+++|||+++|.+|+.. + + .+
T Consensus 102 I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~ 181 (393)
T PRK05790 102 IRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALA 181 (393)
T ss_pred HHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 999999999999999764210 0 0 00
Q ss_pred ------C--C------------------------------------------------------ccccccceeEEEEEee
Q 015758 216 ------R--G------------------------------------------------------SCILFGDAAGAVLVQA 233 (401)
Q Consensus 216 ------r--~------------------------------------------------------~~~lfGDGAaAvll~~ 233 (401)
+ + .+..++|||+|+||++
T Consensus 182 ~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s 261 (393)
T PRK05790 182 SQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMS 261 (393)
T ss_pred HHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEec
Confidence 0 0 0113467888888876
Q ss_pred ccCC-CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHH
Q 015758 234 CDSE-DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESAL 311 (401)
Q Consensus 234 ~~~~-~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL 311 (401)
.+.. +.+.-.. .+...+.. + ..|. ..+ .....+++++|
T Consensus 262 ~e~a~~~~~~~~~~I~g~~~~--------------------~---~~~~---------~~~--------~~~~~a~~~a~ 301 (393)
T PRK05790 262 EAKAKELGLTPLARIVSYAVA--------------------G---VDPA---------IMG--------IGPVPAIRKAL 301 (393)
T ss_pred HHHHHHCCCCeeEEEEEEEEc--------------------c---CCCC---------ccc--------hhHHHHHHHHH
Confidence 4311 1111000 11110000 0 0000 000 12236889999
Q ss_pred HHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeeh
Q 015758 312 EKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGA 389 (401)
Q Consensus 312 ~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~ 389 (401)
+++|++++|||++-+|-......-...+.||+.+..++.+ .--+||...|+-...+.+++++-+-+.+.+.+....|.
T Consensus 302 ~~Agi~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~ 381 (393)
T PRK05790 302 EKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIG 381 (393)
T ss_pred HHcCCCHHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999999999999999987766667888999987776533 34789999999998888888764334566788888999
Q ss_pred hhhheeeEEEe
Q 015758 390 GLTWGSAILRW 400 (401)
Q Consensus 390 G~s~~a~llr~ 400 (401)
|..-++++|++
T Consensus 382 ~g~g~~~~~e~ 392 (393)
T PRK05790 382 GGQGVALIVER 392 (393)
T ss_pred CCceeEEEEEc
Confidence 99989999885
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4e-17 Score=163.24 Aligned_cols=248 Identities=23% Similarity=0.199 Sum_probs=175.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCC-CCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPE-DLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~-~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+++..+|+.+|++++|+++|++|++||.||+++.++. +....+..++..+|++.+.++++|+++|+|++.++..|.++
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~ 101 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQI 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHH
Confidence 46889999999999999999999999999999998662 12234567889999965789999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC----C--C------------------CCCCc----------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFT----D--W------------------TDRGS---------------------------- 218 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~----~--~------------------~dr~~---------------------------- 218 (401)
|++|.++.+||+++|.+|+.. . + .++..
T Consensus 102 I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ygitre~~d~~avk 181 (393)
T PRK08235 102 IRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYR 181 (393)
T ss_pred HHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999999999999999887421 0 0 00000
Q ss_pred -----------------------------------------------------------------cccccceeEEEEEee
Q 015758 219 -----------------------------------------------------------------CILFGDAAGAVLVQA 233 (401)
Q Consensus 219 -----------------------------------------------------------------~~lfGDGAaAvll~~ 233 (401)
+..++|||+|+||.+
T Consensus 182 sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt~~~~~~~~DGAaa~vl~s 261 (393)
T PRK08235 182 SHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMS 261 (393)
T ss_pred HHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEeccccCCCCCceEEEEEec
Confidence 001245555555544
Q ss_pred ccCC-CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHH
Q 015758 234 CDSE-DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESAL 311 (401)
Q Consensus 234 ~~~~-~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL 311 (401)
.+.. +.+.-.. .+... + . ...+.... ......+++++|
T Consensus 262 ~~~A~~~~~~p~~~i~g~-----------------------~----~---------~~~~~~~~----~~~~~~a~~~al 301 (393)
T PRK08235 262 EDRAKQEGRKPLATILAH-----------------------T----A---------IAVEAKDF----PRTPGYAINALL 301 (393)
T ss_pred HHHHHHCCCCceEEEEEE-----------------------E----e---------cccChhhh----cchHHHHHHHHH
Confidence 3210 0000000 00000 0 0 00000000 012237899999
Q ss_pred HHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeeh
Q 015758 312 EKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGA 389 (401)
Q Consensus 312 ~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~ 389 (401)
+++|++++|||++-+|-......-...+.||+.+++++.+ .--+||...|+-...+.+++.+-+-+.|++.+...+..
T Consensus 302 ~~agl~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~ 381 (393)
T PRK08235 302 EKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSG 381 (393)
T ss_pred HHhCCCHHHCCeehhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence 9999999999999999988887888889999988877643 33689999999888888888765446778877777777
Q ss_pred hhhheeeEEE
Q 015758 390 GLTWGSAILR 399 (401)
Q Consensus 390 G~s~~a~llr 399 (401)
|..-.+++++
T Consensus 382 gG~g~a~~~e 391 (393)
T PRK08235 382 GGQGDAVLIE 391 (393)
T ss_pred ccceEEEEEE
Confidence 7777777775
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6e-17 Score=162.67 Aligned_cols=249 Identities=20% Similarity=0.190 Sum_probs=176.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCc-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFG-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+++..+|+.+|++++|+++|++++|||.|+++++++....+ .+..++..+|++.+.++++|+.+|+|++.++..|.++
T Consensus 22 ~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~ 101 (404)
T PRK06205 22 KDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQ 101 (404)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhhhhhHHHHHHHHHHHH
Confidence 468899999999999999999999999999999987765543 4778999999965688999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCCC-------------------------------CC-C-----------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFTD-------------------------------WT-D----------------------- 215 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~~-------------------------------~~-d----------------------- 215 (401)
|++|.++.|||+++|.+|+..+ +. .
T Consensus 102 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~gitre~~~~ 181 (404)
T PRK06205 102 VQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQDA 181 (404)
T ss_pred HHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999998763210 00 0
Q ss_pred ----------C---------------------C-------------c--------cccc-----------------ccee
Q 015758 216 ----------R---------------------G-------------S--------CILF-----------------GDAA 226 (401)
Q Consensus 216 ----------r---------------------~-------------~--------~~lf-----------------GDGA 226 (401)
+ + . -.+| +|||
T Consensus 182 ~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~p~g~lt~~~~~~~~DGA 261 (404)
T PRK06205 182 LAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAA 261 (404)
T ss_pred HHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccCCCCCceeCcccCCCCCce
Confidence 0 0 0 0122 3666
Q ss_pred EEEEEeeccCC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 227 GAVLVQACDSE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 227 aAvll~~~~~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
+|+||.+++.. +.+.-. ..+...+.. + ..|. .+ + ....
T Consensus 262 aa~vl~se~~A~~~~~~p~~~i~g~~~~--------------------~---~~~~--------~~-~--------~~~~ 301 (404)
T PRK06205 262 AACLVTTEDKAEELGLRPLARLVSWAVA--------------------G---VEPS--------RM-G--------IGPV 301 (404)
T ss_pred eEEEEecHHHHHHCCCCceEEEEEEEEe--------------------c---cCCc--------cc-c--------ccHH
Confidence 66666553310 001000 000000000 0 0000 00 0 1234
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCc---hhhhhc--ccccCccccChHHHHHHHHHHcCCCCCC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPM---ERVISN--LANYGNTSAASIPLALDEAVRSGKVKPG 379 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~---e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~G 379 (401)
.+++++|+++|++++|||++-+|-......-...+.||+.+ ++++.+ .--+||...++-...+.+++.+-+-+.+
T Consensus 302 ~a~~~al~~Agl~~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~ 381 (404)
T PRK06205 302 PATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQA 381 (404)
T ss_pred HHHHHHHHHcCCCHHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhcCC
Confidence 78999999999999999999999998877777888999876 354432 2368999999888888888775443456
Q ss_pred CEEEEEeeehhhhheeeEEEe
Q 015758 380 HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 380 d~ill~~~G~G~s~~a~llr~ 400 (401)
.+.+...++.|..-.++++++
T Consensus 382 ~~gl~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 382 RYGLETMCIGGGQGLAAVFER 402 (404)
T ss_pred CeEEEEEeccCChhhEEEEEe
Confidence 778888888888888888874
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.2e-17 Score=162.04 Aligned_cols=293 Identities=17% Similarity=0.201 Sum_probs=189.1
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCC--c-----hhh------------hh----hhcCcceeEecCCCCCHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDT--S-----DEW------------IS----VRTGIRNRRVLSGKESLTGLAVE 122 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~--~-----~~~------------i~----~~~Gi~~R~~~~~~e~~~~la~~ 122 (401)
+.|.|+|+|...|.-. +.+++++.+.. + ..+ +. +.. +..+... .-+....|+.+
T Consensus 2 ~~v~ItG~g~~~p~g~-~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~-~~~~~~~-~~~~~~~l~~~ 78 (411)
T PRK07314 2 RRVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDY-MSRKEAR-RMDRFIQYGIA 78 (411)
T ss_pred CcEEEEcceEECCCcC-CHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhc-CCHHHhh-cCCHHHHHHHH
Confidence 3589999999999865 77887775421 1 000 00 000 1111110 11346789999
Q ss_pred HHHHHHHhCCCCcCCCC----EEEEEecCCC----------------------CCC----c-hHHHHHHHcCCCCCCeeE
Q 015758 123 AASRALQMAEVNPEDVD----LVLMCTSTPE----------------------DLF----G-GATQIPKALGCKNNPLAY 171 (401)
Q Consensus 123 Aa~~aL~~agi~~~~Id----~li~~t~~~~----------------------~~~----~-~a~~i~~~lGl~~~~~~~ 171 (401)
|+++||+++|++++++| .++++++... ... . .+.+|+..+|++ .+.+
T Consensus 79 aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~--Gp~~ 156 (411)
T PRK07314 79 AAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAK--GPNH 156 (411)
T ss_pred HHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCC--Cccc
Confidence 99999999999998888 4777764321 001 1 357899999993 7889
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC-----------C-----------CC-CCCCccccccceeEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF-----------T-----------DW-TDRGSCILFGDAAGA 228 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~-----------~-----------~~-~dr~~~~lfGDGAaA 228 (401)
.+..+|++++.+|..|.++|++|.++.+||+++|..+.. + ++ +....++++||||++
T Consensus 157 tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGAaa 236 (411)
T PRK07314 157 SIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGI 236 (411)
T ss_pred cchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceEEE
Confidence 999999999999999999999999999999999964310 0 01 111245789999999
Q ss_pred EEEeeccC-CCCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHH
Q 015758 229 VLVQACDS-EDDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305 (401)
Q Consensus 229 vll~~~~~-~~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~ 305 (401)
+||++.+. .+.| ++. .+...+...+ +.....|.. .+ ....+
T Consensus 237 vvL~~~~~A~~~g~~~~a-~I~g~~~~~d------------------~~~~~~~~~---------~~--------~~~~~ 280 (411)
T PRK07314 237 LVLEELEHAKARGAKIYA-EVVGYGMTGD------------------AYHMTAPAP---------DG--------EGAAR 280 (411)
T ss_pred EEEeeHHHHHHCCCeEEE-EEEEEEEcCC------------------CCCCCCCCC---------Cc--------HHHHH
Confidence 99998542 1222 211 1111110000 000001100 01 12347
Q ss_pred HHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhhh--hcccccCccccChHHHHHHH---HHHcCC
Q 015758 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERVI--SNLANYGNTSAASIPLALDE---AVRSGK 375 (401)
Q Consensus 306 ~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~---~l~~g~ 375 (401)
+++++|+++|++++|||++..|..+..+.|. +.+.++....+++ .....+||+.+|+-.+.|.. .++++.
T Consensus 281 a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ 360 (411)
T PRK07314 281 AMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQV 360 (411)
T ss_pred HHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCC
Confidence 8899999999999999999999988766554 4455664444443 34568899988776655544 334442
Q ss_pred CC------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 376 VK------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 376 ~~------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+. +-++++..+||.|.+..+++|+
T Consensus 361 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~ 408 (411)
T PRK07314 361 IPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFK 408 (411)
T ss_pred cCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEe
Confidence 22 1256788999999999999987
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-16 Score=160.44 Aligned_cols=248 Identities=19% Similarity=0.197 Sum_probs=170.9
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+.+..+|+.+|++++|+++|++|++||.++++++.++... ..+...+..+|++.+.++++|+++|+|++.++..|.++
T Consensus 27 ~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~~aCaSG~~Av~~A~~~ 106 (397)
T PRK06954 27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDM 106 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeeccccchHHHHHHHHHHHH
Confidence 36688999999999999999999999999999988764432 22334445567765689999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC--CCCCCCCCc--------------------------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSR--FTDWTDRGS-------------------------------------------------- 218 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~--~~~~~dr~~-------------------------------------------------- 218 (401)
|++|.++.+|++++|.+|. ++.+.+|..
T Consensus 107 I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~ 186 (397)
T PRK06954 107 LVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDAFAI 186 (397)
T ss_pred HHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999873 211110000
Q ss_pred ----------------------------------------------------------------cccccceeEEEEEeec
Q 015758 219 ----------------------------------------------------------------CILFGDAAGAVLVQAC 234 (401)
Q Consensus 219 ----------------------------------------------------------------~~lfGDGAaAvll~~~ 234 (401)
+..++|||+|+||.++
T Consensus 187 ~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~ 266 (397)
T PRK06954 187 ESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRA 266 (397)
T ss_pred HHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEccccCCCCCceEEEEEecH
Confidence 0011444444444432
Q ss_pred cCC-CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHH
Q 015758 235 DSE-DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALE 312 (401)
Q Consensus 235 ~~~-~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~ 312 (401)
+.. +.+.-.. .+. |. +. . ......+ ......+++++|+
T Consensus 267 ~~a~~~~~~p~~~i~--g~---------------------~~---~-----------~~~~~~~---~~~~~~a~~~al~ 306 (397)
T PRK06954 267 STAKRLGLAPLARVV--GH---------------------ST---F-----------AQAPSKF---TTAPVGAIRKLFE 306 (397)
T ss_pred HHHHHCCCCceEEEE--EE---------------------Ee---c-----------ccCcccc---cchHHHHHHHHHH
Confidence 210 0000000 000 00 00 0 0000000 0123478999999
Q ss_pred HcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehh
Q 015758 313 KAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAG 390 (401)
Q Consensus 313 ~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G 390 (401)
++|++++|||++-+|-......-...+.||+++++++.+ .--+||...|+-...+.+++.+-+-+.|++-+...++.|
T Consensus 307 ~agl~~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~g 386 (397)
T PRK06954 307 KNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGG 386 (397)
T ss_pred HcCCCHHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccc
Confidence 999999999999999888776666778999998887643 347899999998888888877644467788777777777
Q ss_pred hhheeeEEE
Q 015758 391 LTWGSAILR 399 (401)
Q Consensus 391 ~s~~a~llr 399 (401)
..-.+++++
T Consensus 387 g~g~a~~~e 395 (397)
T PRK06954 387 GEATAMGIE 395 (397)
T ss_pred chhhEEEEE
Confidence 777888876
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=160.53 Aligned_cols=245 Identities=19% Similarity=0.148 Sum_probs=168.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC---CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL---FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~---~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+++..+|+.+|++++|+++|+++++||.|++++++++.. ...+..++..+|++ ..+.++++++|++++.+|..|.
T Consensus 18 ~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~aCasg~~ai~~A~ 96 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVEAACASGGAALRQAY 96 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEeCCcHHHHHHHHHHH
Confidence 3568899999999999999999999999999988766542 23578899999995 6889999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC--------------CCCCC--------------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT--------------DWTDR-------------------------------------- 216 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~--------------~~~dr-------------------------------------- 216 (401)
++|++|.+++|||+++|.++... .|..+
T Consensus 97 ~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A 176 (389)
T PRK06064 97 LAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNG 176 (389)
T ss_pred HHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999765311 01000
Q ss_pred -----------------------------CccccccceeEEEEEeeccCC-CCCeeEEEEeecCCCCCceeeeccCCCcc
Q 015758 217 -----------------------------GSCILFGDAAGAVLVQACDSE-DDGLISFDVHSDGEGGRHLNACIKGNQTN 266 (401)
Q Consensus 217 -----------------------------~~~~lfGDGAaAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~~~~~~~~ 266 (401)
..+..++|||+|+||++.+.. +.+.....+...+...+
T Consensus 177 ~~np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v~I~g~g~~~~------------ 244 (389)
T PRK06064 177 SKNPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASD------------ 244 (389)
T ss_pred hhCcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcCCCeEEEEEEEecC------------
Confidence 011256999999999975421 11100011111110000
Q ss_pred cccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch
Q 015758 267 DALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME 346 (401)
Q Consensus 267 ~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e 346 (401)
+.. +... ... .. ......+++++|+++|++++|||++-+|-......-...+.||+.+.
T Consensus 245 ------~~~--~~~~-~~~--~~----------~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~~~~~~e~lgl~~~ 303 (389)
T PRK06064 245 ------TIA--LHDR-KDF--TT----------LDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKK 303 (389)
T ss_pred ------ccc--cccc-ccc--cc----------cHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHHHHHHHHHcCCCCC
Confidence 000 0000 000 00 12334788999999999999999999999988877778899998652
Q ss_pred ----------------h--hhhcc--cccCccccChHHHHHHHHHHcCCCC---------CCCEEEEEeeehh
Q 015758 347 ----------------R--VISNL--ANYGNTSAASIPLALDEAVRSGKVK---------PGHTIAAAGFGAG 390 (401)
Q Consensus 347 ----------------~--~~~~l--~~~Gn~~sasi~~~L~~~l~~g~~~---------~Gd~ill~~~G~G 390 (401)
+ ++.+- --+||+..++-...+.+++.+-+-+ .-++.+..++|..
T Consensus 304 G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~rqv~~a~~~l~~~~g~~ 376 (389)
T PRK06064 304 GEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNVGGT 376 (389)
T ss_pred CchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCccCCCccEEEEecCCCc
Confidence 2 22221 2489999998888888887752222 2356677777643
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-16 Score=155.97 Aligned_cols=228 Identities=15% Similarity=0.145 Sum_probs=160.7
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+++..+|+.+|++++|+++|++++|||.||++++.+... ...+..++..+|++ +.++++++++|++++.+|..|..+
T Consensus 17 ~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~~~casg~~al~~A~~~ 95 (385)
T PRK12578 17 DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVEAMCATGLAASLTAYTA 95 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEeccCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998776422 22478899999995 467799999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC--------------CCCC-CC--------------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFT--------------DWTD-RG-------------------------------------- 217 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~--------------~~~d-r~-------------------------------------- 217 (401)
|++|.+++|||+++|.++... .|.. +.
T Consensus 96 I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~ 175 (385)
T PRK12578 96 VASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGA 175 (385)
T ss_pred HHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHh
Confidence 999999999999999876320 0100 00
Q ss_pred -----------------------------ccccccceeEEEEEeeccCC-CCCe-eEEEEeecCCCCCceeeeccCCCcc
Q 015758 218 -----------------------------SCILFGDAAGAVLVQACDSE-DDGL-ISFDVHSDGEGGRHLNACIKGNQTN 266 (401)
Q Consensus 218 -----------------------------~~~lfGDGAaAvll~~~~~~-~~gl-~~~~~~s~g~~~~~l~~~~~~~~~~ 266 (401)
.+..++|||+|+||.+++.. +.++ -...+...+...+...
T Consensus 176 ~np~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~--------- 246 (385)
T PRK12578 176 MNPKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAY--------- 246 (385)
T ss_pred cCChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccc---------
Confidence 01357899999999975421 1110 0011111110000000
Q ss_pred cccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch
Q 015758 267 DALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME 346 (401)
Q Consensus 267 ~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e 346 (401)
+ + .++. + .. ......+++++|+++|++++|||++.+|-.....--...+.||+.+.
T Consensus 247 --~---~----~~~~---~--~~----------~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~~~l~~le~lGl~~~ 302 (385)
T PRK12578 247 --V---A----RRGE---W--VG----------FKATQLAARQAYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEK 302 (385)
T ss_pred --c---c----cccc---c--cc----------cHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHHHcCCCCC
Confidence 0 0 0000 0 00 01334788999999999999999999999999888888899998762
Q ss_pred ------------------hhhhc--ccccCccccChHHHHHHHHHHc
Q 015758 347 ------------------RVISN--LANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 347 ------------------~~~~~--l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
+++.+ +--+||...++-...+.+++.+
T Consensus 303 G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~q 349 (385)
T PRK12578 303 GKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQ 349 (385)
T ss_pred CchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHH
Confidence 22222 2368999988888888888775
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=158.78 Aligned_cols=245 Identities=20% Similarity=0.180 Sum_probs=174.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-Cc-hH--HHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FG-GA--TQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~-~a--~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
+.+..+|+.+|++++|+++|++|+|||.++++++.++.. +. .+ ..+...++ .+.++++|+++|++++.++..|.
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~~~CaSg~~ai~~A~ 106 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVDRQCASSLTTVSIGA 106 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhhhhhHHHHHHHHHHH
Confidence 578999999999999999999999999999999887543 22 23 23344444 46889999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC---------------CC----CCCC--------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT---------------DW----TDRG-------------------------------- 217 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~---------------~~----~dr~-------------------------------- 217 (401)
++|++|.++.+||++.|.+++.. ++ .+..
T Consensus 107 ~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~ 186 (394)
T PRK06445 107 MEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQ 186 (394)
T ss_pred HHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999999999765210 00 0000
Q ss_pred -----------------------------c-------------------------------cccccceeEEEEEeeccCC
Q 015758 218 -----------------------------S-------------------------------CILFGDAAGAVLVQACDSE 237 (401)
Q Consensus 218 -----------------------------~-------------------------------~~lfGDGAaAvll~~~~~~ 237 (401)
+ +...+|||+|+||++.+..
T Consensus 187 ~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A 266 (394)
T PRK06445 187 LAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAV 266 (394)
T ss_pred HHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHH
Confidence 0 0112566666666543210
Q ss_pred -CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcC
Q 015758 238 -DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAG 315 (401)
Q Consensus 238 -~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~ag 315 (401)
+.+.-.. .+...+.. + .-| .. .......+++++|+++|
T Consensus 267 ~~~~~~~~a~i~g~~~~--------------------~---~~~--------------~~---~~~~~~~a~~~al~~Ag 306 (394)
T PRK06445 267 KKYGLKPMAKIRSFGFA--------------------G---VPP--------------AI---MGKGPVPASKKALEKAG 306 (394)
T ss_pred HHCCCCceEEEEEEEEe--------------------c---cCC--------------ch---hcchHHHHHHHHHHHcC
Confidence 0010000 01000000 0 000 00 00134578999999999
Q ss_pred CCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcc--cccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhh
Q 015758 316 LTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL--ANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTW 393 (401)
Q Consensus 316 l~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l--~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~ 393 (401)
++++|||++-+|-......-...+.||+++++++.+- --+||...++-...+.+++.+-+.+.+.+.+....|.|..-
T Consensus 307 l~~~dId~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~~~~gg~g 386 (394)
T PRK06445 307 LSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVATLCVGGGQG 386 (394)
T ss_pred CCHHHcCEEEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCCCEEEEEEcccCChh
Confidence 9999999999999998888889999999988876432 36899999999999888888766667788888889999988
Q ss_pred eeeEEE
Q 015758 394 GSAILR 399 (401)
Q Consensus 394 ~a~llr 399 (401)
.+++|+
T Consensus 387 ~a~~~e 392 (394)
T PRK06445 387 GAVVLE 392 (394)
T ss_pred hEEEEE
Confidence 888886
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.7e-16 Score=158.47 Aligned_cols=241 Identities=19% Similarity=0.243 Sum_probs=162.0
Q ss_pred CHHHHHHHHHHHHHHhCCCC---cCCCCEEEEEecC---------------CCCC--------Cc--hHHHHHHHcCCCC
Q 015758 115 SLTGLAVEAASRALQMAEVN---PEDVDLVLMCTST---------------PEDL--------FG--GATQIPKALGCKN 166 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~---~~~Id~li~~t~~---------------~~~~--------~~--~a~~i~~~lGl~~ 166 (401)
....|+..|+++||+++|++ +++++.++.++.. ++.. .+ .+.+|+..+|++
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR- 157 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC-
Confidence 35679999999999999986 4556665543321 1111 11 357889999993
Q ss_pred CCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC-----------------------CCCC-CCCCcccc
Q 015758 167 NPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SR-----------------------FTDW-TDRGSCIL 221 (401)
Q Consensus 167 ~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~-----------------------~~~~-~dr~~~~l 221 (401)
.+++++..+|++++.||..|.++|++|+++.+||+++|.. +. ..++ ..+..+++
T Consensus 158 -G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~v 236 (410)
T PRK07103 158 -GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFI 236 (410)
T ss_pred -CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCee
Confidence 6889999999999999999999999999999999998641 10 0011 11234579
Q ss_pred ccceeEEEEEeeccC-CCCC--e----eEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHH
Q 015758 222 FGDAAGAVLVQACDS-EDDG--L----ISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKE 294 (401)
Q Consensus 222 fGDGAaAvll~~~~~-~~~g--l----~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~ 294 (401)
+||||+++||++.+. .+.| + .++...+++. +. ..|.
T Consensus 237 ~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~---~~--------------------~~p~-------------- 279 (410)
T PRK07103 237 YGEACGAVVLESAESARRRGARPYAKLLGWSMRLDAN---RG--------------------PDPS-------------- 279 (410)
T ss_pred EeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCC---CC--------------------CCCC--------------
Confidence 999999999997542 1122 2 2222222211 00 0010
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHH-H-cCCCchhh--hhcccccCccccChHHHHHHHH
Q 015758 295 VFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVAN-R-LDVPMERV--ISNLANYGNTSAASIPLALDEA 370 (401)
Q Consensus 295 v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~-~-lgl~~e~~--~~~l~~~Gn~~sasi~~~L~~~ 370 (401)
.....++++++|+++|++++|||++..|..+....|.++. . ++.....+ ..+...+||+.+|+-.+.|...
T Consensus 280 -----~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 354 (410)
T PRK07103 280 -----LEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGDETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIAT 354 (410)
T ss_pred -----HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEECCCcccccCchhhhHHHHHHH
Confidence 0223588999999999999999999999998876554332 1 23222222 2455688999999888877654
Q ss_pred ---HHcCCCC-----------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 371 ---VRSGKVK-----------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 371 ---l~~g~~~-----------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
++++.+. +-.+++..+||.|.+..+++|+
T Consensus 355 ~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 355 LLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred HHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 3333211 1256788999999999999986
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-16 Score=160.70 Aligned_cols=290 Identities=18% Similarity=0.238 Sum_probs=187.0
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhC--Cc-----hhh------------hhh-----hcCcceeEecCC-----CCCH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVD--TS-----DEW------------ISV-----RTGIRNRRVLSG-----KESL 116 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~--~~-----~~~------------i~~-----~~Gi~~R~~~~~-----~e~~ 116 (401)
+.|.|.|+|...|... +.+++++.+. .+ +.+ +.. ..|+..+.+..+ -...
T Consensus 4 ~~V~ItG~g~~~p~g~-~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 82 (424)
T PRK06333 4 KRIVVTGMGAVSPLGC-GVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMDRF 82 (424)
T ss_pred CCEEEEcceEECCCCC-CHHHHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHcCCHHHHhhcCHH
Confidence 3689999999999875 6788877542 11 010 000 001111111110 1245
Q ss_pred HHHHHHHHHHHHHhCCCCcCCC-C----EEEEEecCCCC----------------------C---Cc--hHHHHHHHcCC
Q 015758 117 TGLAVEAASRALQMAEVNPEDV-D----LVLMCTSTPED----------------------L---FG--GATQIPKALGC 164 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~I-d----~li~~t~~~~~----------------------~---~~--~a~~i~~~lGl 164 (401)
..|+..|++++|+++|++++++ + .++++++.+.. . .. .+.+|+..+|+
T Consensus 83 ~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 162 (424)
T PRK06333 83 ILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF 162 (424)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCC
Confidence 6889999999999999988776 3 46666653210 0 01 25789999999
Q ss_pred CCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-C----------C------------CCCC-CCccc
Q 015758 165 KNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-F----------T------------DWTD-RGSCI 220 (401)
Q Consensus 165 ~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-~----------~------------~~~d-r~~~~ 220 (401)
+.+.+.+.++|++++.||..|.++|++|.++.+||+++|.+.. + + ++.| ....+
T Consensus 163 --~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~G~ 240 (424)
T PRK06333 163 --KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDGF 240 (424)
T ss_pred --CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCCCe
Confidence 4889999999999999999999999999999999999997321 0 0 1111 12457
Q ss_pred cccceeEEEEEeeccC-CCCC--ee----EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchH
Q 015758 221 LFGDAAGAVLVQACDS-EDDG--LI----SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGK 293 (401)
Q Consensus 221 lfGDGAaAvll~~~~~-~~~g--l~----~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~ 293 (401)
+.||||+++||++.+. .+.| ++ ++...+|+. ++ ..|.. ++
T Consensus 241 ~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~---~~--------------------~~~~~---------~~- 287 (424)
T PRK06333 241 VMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAY---HM--------------------TAGPE---------DG- 287 (424)
T ss_pred EEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCC---CC--------------------CCCCC---------Cc-
Confidence 8999999999997542 1122 21 111111110 00 01100 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhh--hcccccCccccChHHHH
Q 015758 294 EVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVI--SNLANYGNTSAASIPLA 366 (401)
Q Consensus 294 ~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~ 366 (401)
....++++++|+++|++++|||++..|..+....| .+.+.++ ....+. .....+||+.+|+-.+.
T Consensus 288 -------~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~ 359 (424)
T PRK06333 288 -------EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVE 359 (424)
T ss_pred -------HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHH
Confidence 34558899999999999999999999998876543 4556676 222232 45679999987775554
Q ss_pred HHHH---HHcCCC-------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 367 LDEA---VRSGKV-------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 367 L~~~---l~~g~~-------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
+... ++++.+ .+-++++..+||.|.+..+++|+
T Consensus 360 ~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~ 420 (424)
T PRK06333 360 AIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFR 420 (424)
T ss_pred HHHHHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEe
Confidence 4332 444321 12356788899999999999986
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-16 Score=156.69 Aligned_cols=248 Identities=21% Similarity=0.165 Sum_probs=175.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
+.+..+|+.+|++++|+++|+.+++||.++++++.++.. ...+.+++..+|++.+.++++|+++|+|++.++..|.++
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~aCaSG~~Al~~A~~~ 103 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAER 103 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHH
Confidence 568899999999999999998889999999998876533 234667999999964589999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC--------C---------CC----------------------------------CCCc-
Q 015758 191 IRGGGFRNVLVIGGDALSRFT--------D---------WT----------------------------------DRGS- 218 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~--------~---------~~----------------------------------dr~~- 218 (401)
|++|.++.+||+++|.+|... . +. ++..
T Consensus 104 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag 183 (391)
T PRK07661 104 IMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEG 183 (391)
T ss_pred HHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999877321 0 00 0000
Q ss_pred -------------------------------------------------------------cccccceeEEEEEeeccCC
Q 015758 219 -------------------------------------------------------------CILFGDAAGAVLVQACDSE 237 (401)
Q Consensus 219 -------------------------------------------------------------~~lfGDGAaAvll~~~~~~ 237 (401)
+..++|||+|+||.+.+..
T Consensus 184 ~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~~~~DGAaavvl~s~~~A 263 (391)
T PRK07661 184 KFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKA 263 (391)
T ss_pred CCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccCCCCCceEEEEEecHHHH
Confidence 0012344444444432210
Q ss_pred -CCCeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcC
Q 015758 238 -DDGLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAG 315 (401)
Q Consensus 238 -~~gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~ag 315 (401)
+.|.-.. .+...+. .+ ..| ..+. .....+++++|+++|
T Consensus 264 ~~~g~~~~~~i~g~~~--------------------~~---~~~--------------~~~~---~~~~~a~~~al~~ag 303 (391)
T PRK07661 264 ESDGLKPLAKFRSFAV--------------------AG---VPP--------------EVMG---IGPIAAIPKALKLAG 303 (391)
T ss_pred HHCCCCceEEEEEEEE--------------------ec---CCC--------------cccc---hHHHHHHHHHHHHcC
Confidence 0000000 0000000 00 000 0000 133578899999999
Q ss_pred CCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhh
Q 015758 316 LTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTW 393 (401)
Q Consensus 316 l~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~ 393 (401)
++++|||++.+|-.....--...+.||+.+++++.+ .--+||...++-...+.+++.+-+-+.|.+.+...++.|..-
T Consensus 304 l~~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~~~c~~gg~g 383 (391)
T PRK07661 304 LELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMG 383 (391)
T ss_pred CCHHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChh
Confidence 999999999999988877777888999988777533 346899999998888888887655456677888888888888
Q ss_pred eeeEEEe
Q 015758 394 GSAILRW 400 (401)
Q Consensus 394 ~a~llr~ 400 (401)
.++++++
T Consensus 384 ~a~~~e~ 390 (391)
T PRK07661 384 AAGVFEL 390 (391)
T ss_pred hEEEEEe
Confidence 8888874
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.5e-16 Score=155.63 Aligned_cols=248 Identities=16% Similarity=0.153 Sum_probs=174.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-c-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-G-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
.+.+..+|+.+|++++|+++|++++|||.+++++.++.... + .+..++..+|++...++++|+.+|++++.++..|++
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~ 146 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 146 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHH
Confidence 46789999999999999999999999999999987665432 2 345677788996558899999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCC------------CCC---C---------------------------------------
Q 015758 190 HIRGGGFRNVLVIGGDALSRFT------------DWT---D--------------------------------------- 215 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~~------------~~~---d--------------------------------------- 215 (401)
+|++|.++.|||++.|.+|..- ++. +
T Consensus 147 ~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ 226 (452)
T PLN02287 147 AIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATA 226 (452)
T ss_pred HHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999876310 000 0
Q ss_pred ----CC-----------------------------------------------------ccccccceeEEEEEeeccCC-
Q 015758 216 ----RG-----------------------------------------------------SCILFGDAAGAVLVQACDSE- 237 (401)
Q Consensus 216 ----r~-----------------------------------------------------~~~lfGDGAaAvll~~~~~~- 237 (401)
+. .+..++|||+|+||.+++..
T Consensus 227 ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~ 306 (452)
T PLN02287 227 SGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAM 306 (452)
T ss_pred cCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHH
Confidence 00 00123466666666653310
Q ss_pred CCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcC
Q 015758 238 DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAG 315 (401)
Q Consensus 238 ~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~ag 315 (401)
+.+ +...-.... ..+ . +. ..+ ......+++++|+++|
T Consensus 307 ~~~~~~~a~~~~~~---------------------~~~----~------------~~-~~~---~~~~~~A~~~al~~Ag 345 (452)
T PLN02287 307 QKGLPILGVFRSFA---------------------AVG----V------------DP-AVM---GIGPAVAIPAAVKAAG 345 (452)
T ss_pred HCCCCeEEEEEEEe---------------------ecc----C------------CC-ccc---hHHHHHHHHHHHHHcC
Confidence 001 110000000 000 0 00 000 0123478999999999
Q ss_pred CCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCC--CEEEEEeeehhh
Q 015758 316 LTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPG--HTIAAAGFGAGL 391 (401)
Q Consensus 316 l~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~G--d~ill~~~G~G~ 391 (401)
++++|||++-+|-.....--...+.||+.+++++.+ .--+||...|+-...+.+++.+-+-+.| .+.+...+..|.
T Consensus 346 l~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG 425 (452)
T PLN02287 346 LELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTG 425 (452)
T ss_pred CCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccC
Confidence 999999999999877777667788999988877643 3368999888888888887775433444 677777788888
Q ss_pred hheeeEEEe
Q 015758 392 TWGSAILRW 400 (401)
Q Consensus 392 s~~a~llr~ 400 (401)
.-.++++++
T Consensus 426 ~g~a~~ie~ 434 (452)
T PLN02287 426 MGAAAVFER 434 (452)
T ss_pred ceeEEEEEe
Confidence 888888875
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.3e-16 Score=160.60 Aligned_cols=290 Identities=21% Similarity=0.270 Sum_probs=187.8
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCc-------hhh----hh-hhcC-c---------ceeEecCCCCCHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTS-------DEW----IS-VRTG-I---------RNRRVLSGKESLTGLAVEA 123 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~-------~~~----i~-~~~G-i---------~~R~~~~~~e~~~~la~~A 123 (401)
+.|.|.|+|...|.-. +.+++++.+-.- +.| +. +..| | ..+... .-.....+++.|
T Consensus 129 ~rVvITG~G~vtp~G~-~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r-~md~~~~~al~A 206 (540)
T PLN02787 129 RRVVVTGMGVVSPLGH-DPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSK-RMDKFMLYLLTA 206 (540)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHH-hCCHHHHHHHHH
Confidence 4799999999999974 777777754210 011 00 0000 0 000000 012346789999
Q ss_pred HHHHHHhCCCCcCC---CC----EEEEEecCCCC---------------------C---C-c-hHHHHHHHcCCCCCCee
Q 015758 124 ASRALQMAEVNPED---VD----LVLMCTSTPED---------------------L---F-G-GATQIPKALGCKNNPLA 170 (401)
Q Consensus 124 a~~aL~~agi~~~~---Id----~li~~t~~~~~---------------------~---~-~-~a~~i~~~lGl~~~~~~ 170 (401)
+++||+++|++++. ++ .|+++|..+.. . . . .+.+|+..+|+. .+.
T Consensus 207 a~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~--Gp~ 284 (540)
T PLN02787 207 GKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWM--GPN 284 (540)
T ss_pred HHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCC--CCc
Confidence 99999999997642 21 46666654210 0 0 1 256889999994 889
Q ss_pred EeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CCC---------------------CCCCC-CCccccccceeE
Q 015758 171 YDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SRF---------------------TDWTD-RGSCILFGDAAG 227 (401)
Q Consensus 171 ~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~~---------------------~~~~d-r~~~~lfGDGAa 227 (401)
+.|+++|++++.||..|.++|++|+++.+||.++|.. +.+ .++-| ....+++||||+
T Consensus 285 ~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GEGAa 364 (540)
T PLN02787 285 YSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGAG 364 (540)
T ss_pred cccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCcccccceE
Confidence 9999999999999999999999999999999999963 110 11112 224678999999
Q ss_pred EEEEeeccC-CCCC--ee----EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHH
Q 015758 228 AVLVQACDS-EDDG--LI----SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300 (401)
Q Consensus 228 Avll~~~~~-~~~g--l~----~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~ 300 (401)
++||++.+. .+.| ++ ++...+|+. |+. .|. .+|
T Consensus 365 ~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~---~~t--------------------~p~---------p~g-------- 404 (540)
T PLN02787 365 VLLLEELEHAKKRGANIYAEFLGGSFTCDAY---HMT--------------------EPH---------PEG-------- 404 (540)
T ss_pred EEEEeeHHHHHHCCCeeEEEEEEEEEecCCC---CCC--------------------CCC---------cCH--------
Confidence 999997542 1222 32 222222221 111 110 011
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCch-hhhhcccccCccccChHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPME-RVISNLANYGNTSAASIPLALDE---AV 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e-~~~~~l~~~Gn~~sasi~~~L~~---~l 371 (401)
..+.++++++|+++|++++|||++..|..+....| .+.+.++-.+. .+..+...+||+.+|+-.+.+.. ++
T Consensus 405 ~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal 484 (540)
T PLN02787 405 AGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAI 484 (540)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHH
Confidence 23458899999999999999999999999876554 35556663221 23356779999988876655444 34
Q ss_pred HcCCCC-------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 372 RSGKVK-------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 372 ~~g~~~-------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
++|.+. +-+.+|..+||.|....+++|+
T Consensus 485 ~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~ 537 (540)
T PLN02787 485 RTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFA 537 (540)
T ss_pred hcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEE
Confidence 443221 1245688899999999999986
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.4e-16 Score=153.79 Aligned_cols=288 Identities=19% Similarity=0.248 Sum_probs=185.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh-C-Cch-hhhhhhcC---cceeEecCCCCCHHHHHHHHHHHHHHhCCCCc--CC
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV-D-TSD-EWISVRTG---IRNRRVLSGKESLTGLAVEAASRALQMAEVNP--ED 137 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~-~-~~~-~~i~~~~G---i~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~--~~ 137 (401)
+.|.|.|+|...|-.. .+++++.+ . .+. ..+..... ...+.+.........++..|+++||+++|+++ ++
T Consensus 2 ~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Al~dagl~~~~~~ 79 (381)
T PRK05952 2 MKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGLIGNQPSSLEDLTKTVVTAALKDAGLTPPLTD 79 (381)
T ss_pred CeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCcccccccccceeeccccccccHHHHHHHHHHHHhcCCCCCCCC
Confidence 4689999999999987 77777654 2 110 11111101 11111100111234577789999999999975 34
Q ss_pred CCEEEEEecCCC--------------------C---------CC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHH
Q 015758 138 VDLVLMCTSTPE--------------------D---------LF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187 (401)
Q Consensus 138 Id~li~~t~~~~--------------------~---------~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A 187 (401)
+. ++++|+.+. + .. ..+.+++..+|++ .+.+.+..+|++++.||..|
T Consensus 80 ~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~--Gp~~ti~~aCasg~~Ai~~A 156 (381)
T PRK05952 80 CG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ--GPVLAPMAACATGLWAIAQG 156 (381)
T ss_pred EE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC--CccccccchhHHHHHHHHHH
Confidence 43 555654321 0 01 1267899999994 78999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecc-CCCC----------C-----CC-CCCCccccccceeEEEEEeeccC-CCCC--ee----E
Q 015758 188 ACHIRGGGFRNVLVIGGDA-LSRF----------T-----DW-TDRGSCILFGDAAGAVLVQACDS-EDDG--LI----S 243 (401)
Q Consensus 188 ~~~l~~g~~~~vLvv~~d~-~s~~----------~-----~~-~dr~~~~lfGDGAaAvll~~~~~-~~~g--l~----~ 243 (401)
.++|++|+++.+||.++|. .+.+ + ++ +.+...+++||||+++||++.+. .+.| ++ +
T Consensus 157 ~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g 236 (381)
T PRK05952 157 VELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILG 236 (381)
T ss_pred HHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCceEEEEEE
Confidence 9999999999999999996 3321 0 11 12235578999999999998542 1122 22 2
Q ss_pred EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCE
Q 015758 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDW 323 (401)
Q Consensus 244 ~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~ 323 (401)
+...+|+. ++ ..|. .++ ....++++++|+++|++++|||+
T Consensus 237 ~~~~~d~~---~~--------------------~~~~---------~~~--------~~~~~ai~~Al~~agi~p~dId~ 276 (381)
T PRK05952 237 FGLTCDAY---HM--------------------SAPE---------PDG--------KSAIAAIQQCLARSGLTPEDIDY 276 (381)
T ss_pred EEecCCCC---CC--------------------CCCC---------CCH--------HHHHHHHHHHHHHhCCCHHHeeE
Confidence 22222211 00 0110 011 34558899999999999999999
Q ss_pred EEecccCHHHHHH-----HHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHcCCCCC-----------------
Q 015758 324 LLLHQANQRIIDA-----VANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRSGKVKP----------------- 378 (401)
Q Consensus 324 ~i~Hq~~~~i~~~-----i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~g~~~~----------------- 378 (401)
+..|..+.+..|. +.+.++- .-.+..+...+||+.+|+-.+.+... ++++.+.|
T Consensus 277 i~~hgtgt~~~D~~E~~al~~~fg~-~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~ 355 (381)
T PRK05952 277 IHAHGTATRLNDQREANLIQALFPH-RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQA 355 (381)
T ss_pred EEccCCCCCCCcHHHHHHHHHHcCC-CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCc
Confidence 9999988776554 3444551 11122455799999998877766544 44443322
Q ss_pred ----CCEEEEEeeehhhhheeeEEE
Q 015758 379 ----GHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 379 ----Gd~ill~~~G~G~s~~a~llr 399 (401)
=++++..+||.|.+.++++|+
T Consensus 356 ~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 356 QQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred ccCCCCEEEEeeecCCCeeEEEEEe
Confidence 257899999999999999986
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.8e-16 Score=156.79 Aligned_cols=286 Identities=21% Similarity=0.191 Sum_probs=186.5
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhC--Cc-----hhhhhh----h-----cCcceeEecC-----CCCCHHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVD--TS-----DEWISV----R-----TGIRNRRVLS-----GKESLTGLAVEAA 124 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~--~~-----~~~i~~----~-----~Gi~~R~~~~-----~~e~~~~la~~Aa 124 (401)
+.|.|.|+|...|... +.+++++.+- .+ +.|... . ..+..+.... .-+....|+..|+
T Consensus 1 ~~VvItG~G~vsp~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (399)
T cd00832 1 RRAVVTGIGVVAPNGL-GVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAA 79 (399)
T ss_pred CCEEEEeeEEeCCCCC-CHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 3589999999999875 6777777541 11 111100 0 0011110000 1134678999999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCCC----------------------C---C--chHHHHHHHcCCCCCCeeEee
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPED----------------------L---F--GGATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~~----------------------~---~--~~a~~i~~~lGl~~~~~~~~i 173 (401)
++||+++|+++++++ .|+++++.+.. . + ..+.+|+..+|++ .+++.+
T Consensus 80 ~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~--Gp~~ti 157 (399)
T cd00832 80 DWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMR--GPSGVV 157 (399)
T ss_pred HHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCC--CCcccc
Confidence 999999999876543 35666654211 0 0 1257899999994 899999
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CC----------CCCC-CCccccccceeEEEEE
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FT----------DWTD-RGSCILFGDAAGAVLV 231 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~----------~~~d-r~~~~lfGDGAaAvll 231 (401)
..+|++++.||..|.++|++|+ +.+|+.++|.... .+ ++-| +...+++||||+++||
T Consensus 158 ~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~G~~~gEGa~~lvL 236 (399)
T cd00832 158 VAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAILVL 236 (399)
T ss_pred cchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCCCEeeeceEEEEEE
Confidence 9999999999999999999999 9999999987321 11 1112 2345789999999999
Q ss_pred eeccC-CCCC--eeE----EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 232 QACDS-EDDG--LIS----FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 232 ~~~~~-~~~g--l~~----~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
++.+. .+.| ++. +...+|+ .. .+. + ...+.
T Consensus 237 e~~~~A~~rg~~i~a~i~g~~~~~d~-----------------------~~--~~~----------~--------~~~~~ 273 (399)
T cd00832 237 EDAAAARERGARVYGEIAGYAATFDP-----------------------PP--GSG----------R--------PPGLA 273 (399)
T ss_pred eeHHHHHHCCCeEEEEEEeEEEcCCC-----------------------CC--CCC----------C--------HHHHH
Confidence 98542 1222 222 1111111 00 000 0 13456
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHcCCC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRSGKV 376 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~g~~ 376 (401)
++++++|+++|++++|||++..|..+....| .+.+.++-..-.+..+...+||+.+|+-.+.|... ++++.+
T Consensus 274 ~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~i 353 (399)
T cd00832 274 RAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVI 353 (399)
T ss_pred HHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCCCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCc
Confidence 8899999999999999999999998865544 45556663211223456789999998888777553 333321
Q ss_pred C------------------------CCCEEEEEeeehhhhheeeEE
Q 015758 377 K------------------------PGHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 377 ~------------------------~Gd~ill~~~G~G~s~~a~ll 398 (401)
. +-++++..+||.|.+-.+++|
T Consensus 354 pp~~n~~~~~p~~~l~~v~~~~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 354 PPTVNVTDVPPAYGLDLVTGRPRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeccCCCCcceEEEC
Confidence 1 136788999999999888775
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-15 Score=153.34 Aligned_cols=286 Identities=20% Similarity=0.234 Sum_probs=183.7
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhC--Cc-----hhhhhhhcCcceeEe-----------cCC-----CCCHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVD--TS-----DEWISVRTGIRNRRV-----------LSG-----KESLTGLAVEA 123 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~--~~-----~~~i~~~~Gi~~R~~-----------~~~-----~e~~~~la~~A 123 (401)
.|.|.|+|...|-.. +.+++++.+- .+ ++|.. ..++..+.. ..+ -.....|++.|
T Consensus 3 ~VvITG~g~vtp~G~-~~~~~~~~L~~g~s~i~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~a 80 (405)
T PRK09116 3 RVVVTGMGGVTALGE-DWQTIAARLKAGRNAVRRMPEWDR-YDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRA 80 (405)
T ss_pred CEEEEeeEEECCCCC-CHHHHHHHHHcCCCCEEeCCchhh-ccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHH
Confidence 689999999999875 6777776541 11 11110 001111100 000 02346789999
Q ss_pred HHHHHHhCCCCc-CCCC----EEEEEecCCC-----------------CC--------Cc--hHHHHHHHcCCCCCCeeE
Q 015758 124 ASRALQMAEVNP-EDVD----LVLMCTSTPE-----------------DL--------FG--GATQIPKALGCKNNPLAY 171 (401)
Q Consensus 124 a~~aL~~agi~~-~~Id----~li~~t~~~~-----------------~~--------~~--~a~~i~~~lGl~~~~~~~ 171 (401)
+++||+++|++. ..++ .++++++.+. .. ++ .+.+|+..+|++ .+.+
T Consensus 81 a~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~--Gp~~ 158 (405)
T PRK09116 81 SELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLK--GRVI 158 (405)
T ss_pred HHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCC--CCcc
Confidence 999999999843 2221 4566664321 00 11 367899999994 7999
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC---------------------CCCCC-CCccccccceeEEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF---------------------TDWTD-RGSCILFGDAAGAV 229 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~---------------------~~~~d-r~~~~lfGDGAaAv 229 (401)
.+..+|++++.||..|.++|++|+++.+||.++|..+.. .++.| +...+++||||+++
T Consensus 159 ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gEGa~~~ 238 (405)
T PRK09116 159 PTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEGAGTL 238 (405)
T ss_pred cccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeeccEEEE
Confidence 999999999999999999999999999999999975421 01112 12457899999999
Q ss_pred EEeeccC-CCCC--ee----EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHH
Q 015758 230 LVQACDS-EDDG--LI----SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302 (401)
Q Consensus 230 ll~~~~~-~~~g--l~----~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~ 302 (401)
||++.+. ...| ++ ++...+|+. ++ ..| + ...
T Consensus 239 vLe~~~~A~~rga~i~a~i~g~~~~~d~~---~~--------------------~~p-----------~--------~~~ 276 (405)
T PRK09116 239 VLEELEHAKARGATIYAEIVGFGTNSDGA---HV--------------------TQP-----------Q--------AET 276 (405)
T ss_pred EEccHHHHHhCCCceEEEEEEEEEcCCCC---cC--------------------CCC-----------C--------HHH
Confidence 9997432 1122 22 222211110 00 011 0 134
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHcC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRSG 374 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~g 374 (401)
+.++++++|+++|++++|||++.+|..+....| .+.+.++- .-.+..+...+||+.+|+-.+.+... ++++
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~-~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~ 355 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA-RMPISSLKSYFGHTLGACGALEAWMSIEMMNEG 355 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC-CCeeECcchhhcccHHHHHHHHHHHHHHHHHcC
Confidence 568899999999999999999999998765443 45566662 11223566799999777655544322 3333
Q ss_pred CC-------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 375 KV-------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~-------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+ .+.+++|..+||.|.+-++++|+
T Consensus 356 ~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 356 WFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred ccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 21 12356889999999999999985
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=8e-16 Score=155.04 Aligned_cols=291 Identities=19% Similarity=0.226 Sum_probs=187.2
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhC--Cc-----hhhhhh-----hcC----cceeEecCC-----CCCHHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVD--TS-----DEWISV-----RTG----IRNRRVLSG-----KESLTGLAVEAA 124 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~--~~-----~~~i~~-----~~G----i~~R~~~~~-----~e~~~~la~~Aa 124 (401)
+.|.|.|+|...|.-. +.+++++.+- .+ .+|... ..| +....+..+ -.....++..|+
T Consensus 4 ~~VvItG~g~~~p~g~-~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVGN-TVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 4689999999999984 7788877541 11 011000 000 000000000 023457899999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCCC---------------------C----C--chHHHHHHHcCCCCCCeeEee
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPED---------------------L----F--GGATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~~---------------------~----~--~~a~~i~~~lGl~~~~~~~~i 173 (401)
++||+++|+++++.+ .++++++.+.. . . ..+.+|+..+|++ .+.+.+
T Consensus 83 ~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~--Gp~~ti 160 (414)
T PRK08722 83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR--GPNIAI 160 (414)
T ss_pred HHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC--CCcccc
Confidence 999999999765433 35666653210 0 1 1378899999994 899999
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-C----------C-----------CCCC-CCccccccceeEEEE
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-F----------T-----------DWTD-RGSCILFGDAAGAVL 230 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-~----------~-----------~~~d-r~~~~lfGDGAaAvl 230 (401)
+.+|++++.||..|.++|++|+++.+||+++|.... + + ++-| +...++.|||++++|
T Consensus 161 ~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGaaalv 240 (414)
T PRK08722 161 STACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMV 240 (414)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceEEEEE
Confidence 999999999999999999999999999999997532 0 1 1111 224578999999999
Q ss_pred EeeccC-CCCC--ee----EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 231 VQACDS-EDDG--LI----SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 231 l~~~~~-~~~g--l~----~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
|++.+. .+.| ++ ++...+|+. ++ .-|.. ++ ...
T Consensus 241 Le~~~~A~~~g~~i~a~i~g~~~~~d~~---~~--------------------~~p~~---------~~--------~~~ 280 (414)
T PRK08722 241 LEEYEHAKARGAKIYAELVGFGMSGDAY---HM--------------------TSPSE---------DG--------SGG 280 (414)
T ss_pred EccHHHHHHCCCeEEEEEEEEEEcCCCC---CC--------------------CCCCc---------ch--------HHH
Confidence 997542 1222 22 111111110 10 01110 11 234
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCC-chhhh--hcccccCccccChHHHHHHHH---HH
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVP-MERVI--SNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~-~e~~~--~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
.++++++|+++|++++|||++..|..+....|. +.+.++-. ..+++ .+...+||+.+|+-.+.|... ++
T Consensus 281 ~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~ 360 (414)
T PRK08722 281 ALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLV 360 (414)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHh
Confidence 478899999999999999999999988765554 45566632 22332 456799999888876665332 34
Q ss_pred cCCCC-------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 373 SGKVK-------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 ~g~~~-------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
++.+. .-.+++..+||.|.+-++++|+
T Consensus 361 ~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 412 (414)
T PRK08722 361 DQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFK 412 (414)
T ss_pred cCccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEe
Confidence 33111 1256788899999999999986
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-15 Score=152.11 Aligned_cols=241 Identities=23% Similarity=0.225 Sum_probs=171.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
+.+..+|+.+|++++|+++|+++++||.++++++.+... +..+..++..+|++ ..+.++++.+|++++.++..|.++|
T Consensus 13 ~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~~c~sg~~al~~Aa~~I 91 (375)
T cd00829 13 DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEAAGASGSAAVRAAAAAI 91 (375)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeCccHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999988766543 34678999999995 7899999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCC------------CCCC--CC----------------------------------------
Q 015758 192 RGGGFRNVLVIGGDALSRFT------------DWTD--RG---------------------------------------- 217 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~~------------~~~d--r~---------------------------------------- 217 (401)
++|.++.|||+++|.++... .|.. +.
T Consensus 92 ~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~ 171 (375)
T cd00829 92 ASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAAR 171 (375)
T ss_pred HhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999876320 0100 00
Q ss_pred ----------------------------ccccccceeEEEEEeeccCCCC---C---eeEEEEeecCCCCCceeeeccCC
Q 015758 218 ----------------------------SCILFGDAAGAVLVQACDSEDD---G---LISFDVHSDGEGGRHLNACIKGN 263 (401)
Q Consensus 218 ----------------------------~~~lfGDGAaAvll~~~~~~~~---g---l~~~~~~s~g~~~~~l~~~~~~~ 263 (401)
.+..++|||+|+||++.+..+. . +.++...++.. +
T Consensus 172 np~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g~~~~~~~~---~-------- 240 (375)
T cd00829 172 NPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAASDTP---S-------- 240 (375)
T ss_pred CChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEEEEEecCCc---c--------
Confidence 0124699999999997542111 0 11111110000 0
Q ss_pred CcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCC
Q 015758 264 QTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDV 343 (401)
Q Consensus 264 ~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl 343 (401)
+... .. + ........+++++|+++|++++|||.+-+|-......-...+.||+
T Consensus 241 --------------~~~~-~~---~---------~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~~l~~~e~lGl 293 (375)
T cd00829 241 --------------LSER-DD---F---------LSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGF 293 (375)
T ss_pred --------------cccc-cc---c---------cccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHHHcCC
Confidence 0000 00 0 0013445789999999999999999999999999998899999999
Q ss_pred Cc--h----------------hhhhc--ccccCccccChHHHHHHHHHHcCC-------CCCCCEEEEEeeehhhh
Q 015758 344 PM--E----------------RVISN--LANYGNTSAASIPLALDEAVRSGK-------VKPGHTIAAAGFGAGLT 392 (401)
Q Consensus 344 ~~--e----------------~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~-------~~~Gd~ill~~~G~G~s 392 (401)
.+ + +++.+ .--+||...++-...+.+++++-+ ++..+..+..+.|...+
T Consensus 294 ~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~~~~l~~~~gg~~~ 369 (375)
T cd00829 294 CEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARVGLAHNIGGTGS 369 (375)
T ss_pred CCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcccccCCCccEEEEecCCCccc
Confidence 87 3 33322 235799999888887777776522 22345566666654433
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-15 Score=149.10 Aligned_cols=241 Identities=23% Similarity=0.217 Sum_probs=165.9
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC---chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF---GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~---~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
++++..+|+.+|+++||+++|++++|||.|++++ +++... ..+..+++.||++ ..++++++++|+++..++..|.
T Consensus 20 ~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~~casg~~al~~A~ 97 (386)
T PRK08313 20 QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT-GKPLIRVHTAGSVGGSTAVVAA 97 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC-CCceEEEeccCHHHHHHHHHHH
Confidence 3578999999999999999999999999999887 454321 1347899999994 6789999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC---------CCC---------------------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT---------DWT--------------------------------------------- 214 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~---------~~~--------------------------------------------- 214 (401)
++|++|.+++||||++|.++..- +|.
T Consensus 98 ~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~ 177 (386)
T PRK08313 98 SLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPY 177 (386)
T ss_pred HHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcH
Confidence 99999999999999999765310 010
Q ss_pred ----CC-C------------------ccccccceeEEEEEeeccCCC-CC------eeEEEEeecCCCCCceeeeccCCC
Q 015758 215 ----DR-G------------------SCILFGDAAGAVLVQACDSED-DG------LISFDVHSDGEGGRHLNACIKGNQ 264 (401)
Q Consensus 215 ----dr-~------------------~~~lfGDGAaAvll~~~~~~~-~g------l~~~~~~s~g~~~~~l~~~~~~~~ 264 (401)
++ . .+..++|||+|+||.+.+..+ .+ +.++...++. .
T Consensus 178 A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~-----~-------- 244 (386)
T PRK08313 178 AHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEP-----L-------- 244 (386)
T ss_pred HhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecC-----c--------
Confidence 00 0 123578999999999754111 11 1111111000 0
Q ss_pred cccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCC--cCCcCEEEecccCHHHHHHHHHHcC
Q 015758 265 TNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLT--MSSIDWLLLHQANQRIIDAVANRLD 342 (401)
Q Consensus 265 ~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~--~~dId~~i~Hq~~~~i~~~i~~~lg 342 (401)
.+... +. + . ......+.+++++++|++ ++|||.+-+|-......-...+.||
T Consensus 245 ------------~~~~~-~~---~--------~--~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~~~~~~~e~lG 298 (386)
T PRK08313 245 ------------AFAGR-DQ---V--------N--PQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSWFEPMWLENLG 298 (386)
T ss_pred ------------ccccc-cc---c--------c--cHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChHHHHHHHHHcC
Confidence 00000 00 0 0 123347889999999998 7999999999999888888999999
Q ss_pred CCch----------------h--hhh---cccccCccccChHHHHHHHHHHc--C-----CCCCCCEEEEEeeehhhhhe
Q 015758 343 VPME----------------R--VIS---NLANYGNTSAASIPLALDEAVRS--G-----KVKPGHTIAAAGFGAGLTWG 394 (401)
Q Consensus 343 l~~e----------------~--~~~---~l~~~Gn~~sasi~~~L~~~l~~--g-----~~~~Gd~ill~~~G~G~s~~ 394 (401)
+.++ + ++. .+ . ||...++-...+.|++++ | .++.-++.+..+.|.+....
T Consensus 299 l~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l-~-g~p~gatG~~~~~e~~~qlrG~ag~rQv~~a~~~l~~~~Gg~~~~~ 376 (386)
T PRK08313 299 FAPEGEGWKLTEAGETAIGGRLPVNPSGGVL-S-SNPIGASGMIRFAEAALQVMGKAGEHQVDGARKALGHAYGGGSQFF 376 (386)
T ss_pred CCCCCchHHHHHCCCcCCCCCccccCCCccc-c-cCCCcHHHHHHHHHHHHHhcccccCCcCCCccEEEEeccCCcceEE
Confidence 9876 2 222 13 3 887666778888887774 2 22333566667666433333
Q ss_pred e
Q 015758 395 S 395 (401)
Q Consensus 395 a 395 (401)
.
T Consensus 377 ~ 377 (386)
T PRK08313 377 S 377 (386)
T ss_pred E
Confidence 3
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-15 Score=150.93 Aligned_cols=265 Identities=18% Similarity=0.114 Sum_probs=170.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC--chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF--GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~--~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
+++..+|+.+|+++||+++|+++++||.||++++.++... ..+..++..||++ +.+.++++.+|++++.+|..|.++
T Consensus 20 ~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~~Casg~~al~~A~~~ 98 (399)
T PRK06059 20 GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYAACASGSQALQSARAQ 98 (399)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccchhHHHHHHHHHHHHH
Confidence 3577999999999999999999999999998877654332 3468899999994 578999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC------------CCCC--CC---------------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFT------------DWTD--RG--------------------------------------- 217 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~------------~~~d--r~--------------------------------------- 217 (401)
|++|.+++|||+++|.++.-. +|.. +.
T Consensus 99 I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~ 178 (399)
T PRK06059 99 ILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATVEDFAQVKVKNARHGLL 178 (399)
T ss_pred HHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcc
Confidence 999999999999999876300 0000 00
Q ss_pred ----------------------------ccccccceeEEEEEeeccCC-CC--Cee-EEEEeecCCCCCceeeeccCCCc
Q 015758 218 ----------------------------SCILFGDAAGAVLVQACDSE-DD--GLI-SFDVHSDGEGGRHLNACIKGNQT 265 (401)
Q Consensus 218 ----------------------------~~~lfGDGAaAvll~~~~~~-~~--gl~-~~~~~s~g~~~~~l~~~~~~~~~ 265 (401)
.+....|||+|+||.+++.. +- +.- ...+...+....... ....+.
T Consensus 179 Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~--~~~~~~ 256 (399)
T PRK06059 179 NPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYP--QHLPEL 256 (399)
T ss_pred CcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEeccccc--cccccc
Confidence 01345899999999975411 11 100 001111010000000 000000
Q ss_pred ccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCc
Q 015758 266 NDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPM 345 (401)
Q Consensus 266 ~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~ 345 (401)
. ++... ...............+++++++++|++++|||.+-+|-......-...+.|||.+
T Consensus 257 ~----------~~~~~---------~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~ 317 (399)
T PRK06059 257 P----------DIATD---------STAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCP 317 (399)
T ss_pred c----------ccccc---------ccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCC
Confidence 0 00000 0000000001223467899999999999999999999997666666679999986
Q ss_pred h------------------hhhhc--ccccCccccChHHHHHHHHHHcCC-------CCCCCEEEEEeeehhhhheeeEE
Q 015758 346 E------------------RVISN--LANYGNTSAASIPLALDEAVRSGK-------VKPGHTIAAAGFGAGLTWGSAIL 398 (401)
Q Consensus 346 e------------------~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~-------~~~Gd~ill~~~G~G~s~~a~ll 398 (401)
. .++.+ +--+||...++-...+.+++.+-+ ++...+.+....|.+..-++++|
T Consensus 318 ~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l 397 (399)
T PRK06059 318 KGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIV 397 (399)
T ss_pred CCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCcCCccCCCccEEEEeccCCcccceEEEe
Confidence 2 22211 236899999999888888877522 22334555555566556667666
Q ss_pred E
Q 015758 399 R 399 (401)
Q Consensus 399 r 399 (401)
+
T Consensus 398 ~ 398 (399)
T PRK06059 398 A 398 (399)
T ss_pred c
Confidence 4
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-15 Score=149.58 Aligned_cols=99 Identities=18% Similarity=0.122 Sum_probs=90.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 111 SGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 111 ~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
..+.++.+|+..+.+.+|+++|++|++||.||+++..+... ...+.+++-..|++.+.++++|+..|+|++.++.+|+
T Consensus 24 l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr~C~Sgl~ai~~aa 103 (417)
T PRK06025 24 LAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAA 103 (417)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeeccccchHHHHHHHHH
Confidence 35678999999999999999999999999999999866543 3468888999999988999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCC
Q 015758 189 CHIRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~ 209 (401)
+.|++|..+.+|+.+.|.+|+
T Consensus 104 ~~I~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 104 AQIMSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HHHHcCCCCEEEEeeeeccCC
Confidence 999999999999999999984
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-15 Score=152.14 Aligned_cols=246 Identities=19% Similarity=0.199 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcC-----CCCEEEEEecCCCC-----------------C--------Cc--hHHHHHHHcC
Q 015758 116 LTGLAVEAASRALQMAEVNPE-----DVDLVLMCTSTPED-----------------L--------FG--GATQIPKALG 163 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~~~-----~Id~li~~t~~~~~-----------------~--------~~--~a~~i~~~lG 163 (401)
...|+.+|+++||+++|+++. +...++++++.+.. . .+ .+.+|+..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 567899999999999998642 35667777753211 0 01 2568999999
Q ss_pred CCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------------------CCCCCC-CCcc
Q 015758 164 CKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------------------FTDWTD-RGSC 219 (401)
Q Consensus 164 l~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------------------~~~~~d-r~~~ 219 (401)
+ ..+.+.|.++|++++.||..|.++|++|.++.+||+++|.... ..++.| +...
T Consensus 173 l--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~~G 250 (437)
T PLN02836 173 F--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDG 250 (437)
T ss_pred C--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCCCC
Confidence 8 3899999999999999999999999999999999999886311 001111 1245
Q ss_pred ccccceeEEEEEeeccC-CCCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHH
Q 015758 220 ILFGDAAGAVLVQACDS-EDDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVF 296 (401)
Q Consensus 220 ~lfGDGAaAvll~~~~~-~~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~ 296 (401)
+++||||+++||++.+. .+.| ++.. +...+... .+.....|. .++
T Consensus 251 ~~~gEGaaalVLe~~~~A~~~g~~i~a~-I~g~~~~~------------------d~~~~~~p~---------~~~---- 298 (437)
T PLN02836 251 FVIGEGAGVLVLEELEHAKRRGAKIYAE-VRGYGMSG------------------DAHHITQPH---------EDG---- 298 (437)
T ss_pred eeeecCEEEEEEeeHHHHHHCCCceEEE-EEeeeecC------------------CCCCCcCCC---------cch----
Confidence 78999999999997542 1222 2211 11101000 010000110 011
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCc--hhhh--hcccccCccccChHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPM--ERVI--SNLANYGNTSAASIPLAL 367 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~--e~~~--~~l~~~Gn~~sasi~~~L 367 (401)
....++++++|+++|++++|||++..|..+....|. +.+.++-.. ..+. .+...+||+.+|+-.+.|
T Consensus 299 ----~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~l 374 (437)
T PLN02836 299 ----RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEA 374 (437)
T ss_pred ----HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHH
Confidence 234578899999999999999999999988765554 444554211 1222 455688999888776654
Q ss_pred HHH---HHcCCCC-------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 368 DEA---VRSGKVK-------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 368 ~~~---l~~g~~~-------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
... ++++.+. +-+.+|..+||.|.+.++++|+
T Consensus 375 i~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~ 434 (437)
T PLN02836 375 IFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFT 434 (437)
T ss_pred HHHHHHHhcCccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEe
Confidence 433 3333211 1244677799999999999987
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-15 Score=141.37 Aligned_cols=276 Identities=20% Similarity=0.256 Sum_probs=178.3
Q ss_pred ccCCeEEEEEEEEcCCCccChHHHHhhhCC--chhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEE
Q 015758 64 INRGCKLVGCGSAVPTLQISNDDLAKIVDT--SDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLV 141 (401)
Q Consensus 64 ~~~~v~I~gig~~lP~~~v~~~~l~~~~~~--~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~l 141 (401)
...+++|.+.++.+-+.. -+--|.+.|+. .|.|+ | +.+| +....+|+.+|+++||+++|++++|||++
T Consensus 10 f~~~p~i~~~~~v~G~~E-~~Gpl~~~FD~~~~d~~~----g--~~sw---EkAE~~L~~EA~~~AL~kAGI~~~DID~i 79 (334)
T PRK12404 10 FENKPVIISTGVVGGPFE-AKGPLAEDFDLLHEDLWL----G--QDSY---EKAERKLLEEACSRAIEKAKLRKEDIQFF 79 (334)
T ss_pred ecCCCEEEEEEEEeCCcc-cCCCChhhCCeeeccccc----C--Ccch---HHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 356789999999987654 33344444432 22222 1 2222 45678999999999999999999999999
Q ss_pred EEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC---CCCCCC----
Q 015758 142 LMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS---RFTDWT---- 214 (401)
Q Consensus 142 i~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s---~~~~~~---- 214 (401)
+.++.+ ++.. .+..+++.||++ .+++.++|+++..+|.+|..+|++|.+++||++++-.++ +-+++.
T Consensus 80 ~vGdL~-nQ~i-pssfvar~LGIP----~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~P~eyG 153 (334)
T PRK12404 80 LAGDLM-NQIT-PTSFAARTLGIP----YLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRYPTEYG 153 (334)
T ss_pred EEEecC-CCcC-cHHHHHHHhCCC----ccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccCccccc
Confidence 999887 3333 345999999973 489999999999999999999999999999999988765 222221
Q ss_pred -C-CCccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEch
Q 015758 215 -D-RGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNG 292 (401)
Q Consensus 215 -d-r~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g 292 (401)
. +.+...---||+|+||++.. ..+.+-.. +.| ..+|+--+++ ++|-.
T Consensus 154 ~Qrp~taqwTvTgaga~~l~~~~-~~~~i~~~---T~G-----------------------kv~D~g~~d~----~nMGa 202 (334)
T PRK12404 154 GQKPPTAQWTVTGAGAAILSKTG-DGPRVTSA---TIG-----------------------RVVDMGLTDP----FNMGG 202 (334)
T ss_pred CcCCCcccEEEEceEEEEEecCC-CCceEEEE---EEE-----------------------EEEecCCCCc----ccchh
Confidence 1 12233344689999998642 12223222 222 1111111110 22311
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecc---cCHHHHHHHHHHcCCCc-h-hhhh----cc-----cccCcc
Q 015758 293 KEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQ---ANQRIIDAVANRLDVPM-E-RVIS----NL-----ANYGNT 358 (401)
Q Consensus 293 ~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq---~~~~i~~~i~~~lgl~~-e-~~~~----~l-----~~~Gn~ 358 (401)
. ......+.|.+.|++.|.+++|.|.++.-- .+.+|+..+.++-|++. + +..+ .+ -.-|-.
T Consensus 203 -a----MAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgS 277 (334)
T PRK12404 203 -A----MAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGAS 277 (334)
T ss_pred -h----hhHHHHHHHHHHHHHhCCChhhccEEEEcchHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCc
Confidence 1 123455788899999999999999999754 56788888888877765 3 3322 01 123445
Q ss_pred ccChHHHHHHHHHHcCCCCCC--CEEEEEeeehhhh
Q 015758 359 SAASIPLALDEAVRSGKVKPG--HTIAAAGFGAGLT 392 (401)
Q Consensus 359 ~sasi~~~L~~~l~~g~~~~G--d~ill~~~G~G~s 392 (401)
||+.....+.-.+-+ +++.| .+||+++.|+=+|
T Consensus 278 GcgcsA~v~~g~~~~-~~~~g~~~rvL~v~TGALlS 312 (334)
T PRK12404 278 GPGCSATVTYGHLLN-RMKRGELKRILVVATGALLS 312 (334)
T ss_pred ccchHHHHHHHHHHH-HHhcCCceEEEEEEchhhcC
Confidence 555554444333331 34444 5799999997544
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=152.15 Aligned_cols=96 Identities=20% Similarity=0.131 Sum_probs=84.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHH-HHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGAT-QIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~-~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+...+|+.+|++++|+++|++|++||.||+++..++... ..+. .+++.+|+ .+.++++|+++|+|++.++..|.++
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~-~~~p~~~V~~~Casg~~al~~A~~~ 98 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL-QEAPAIGMNNLCGSGLRALALAMQL 98 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC-CCCcEEEecchhHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998876432 2333 36788888 4789999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 015758 191 IRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~ 209 (401)
|++|.++.+||+++|.+|.
T Consensus 99 I~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 99 IAGGDANCILAGGFEKMET 117 (393)
T ss_pred HHCCCCCEEEEEeeecccc
Confidence 9999999999999998763
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.5e-15 Score=151.28 Aligned_cols=290 Identities=21% Similarity=0.252 Sum_probs=183.7
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhh---------hcCcceeEecC-----CCCCHHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISV---------RTGIRNRRVLS-----GKESLTGLAVEAAS 125 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~---------~~Gi~~R~~~~-----~~e~~~~la~~Aa~ 125 (401)
.|.|.|+|...|--. +.+++++.+ +.+ +.+-.. ..++..+.+.. .-.....|+..|++
T Consensus 3 ~v~ItG~g~vsp~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa~ 81 (406)
T PRK08439 3 RVVVTGIGMINSLGL-NKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAR 81 (406)
T ss_pred CEEEEeeEEECCCcC-CHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 589999999999876 677777654 211 011000 00011100110 01235789999999
Q ss_pred HHHHhCCCCcCCCC----EEEEEecCCC--------------------------CCC-chHHHHHHHcCCCCCCeeEeeC
Q 015758 126 RALQMAEVNPEDVD----LVLMCTSTPE--------------------------DLF-GGATQIPKALGCKNNPLAYDIT 174 (401)
Q Consensus 126 ~aL~~agi~~~~Id----~li~~t~~~~--------------------------~~~-~~a~~i~~~lGl~~~~~~~~i~ 174 (401)
+||+++|+++++++ .+++++.... ... ..+.+|+..+|++ .+.+++.
T Consensus 82 ~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~--Gp~~~~~ 159 (406)
T PRK08439 82 EAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK--GPNLSSV 159 (406)
T ss_pred HHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCC--CCccccc
Confidence 99999999987775 3555543211 001 1367899999994 7889999
Q ss_pred ccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC----------C-----------CCCCC-CCccccccceeEEEEE
Q 015758 175 AACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SR----------F-----------TDWTD-RGSCILFGDAAGAVLV 231 (401)
Q Consensus 175 ~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~----------~-----------~~~~d-r~~~~lfGDGAaAvll 231 (401)
.+|++++.||..|.++|++|.++.+||+++|.. +. . .++-| ....+++||||+++||
T Consensus 160 ~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa~~lvL 239 (406)
T PRK08439 160 TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALVL 239 (406)
T ss_pred cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCceEEEEE
Confidence 999999999999999999999999999999963 21 0 11111 2245789999999999
Q ss_pred eeccC-CCCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHH
Q 015758 232 QACDS-EDDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIE 308 (401)
Q Consensus 232 ~~~~~-~~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~ 308 (401)
++.+. ...| ++.. +...+... ++....-|. .+...++++
T Consensus 240 e~~~~A~~rg~~i~a~-i~g~~~~~------------------d~~~~~~p~-------------------~~~~~~a~~ 281 (406)
T PRK08439 240 EEYESAKKRGAKIYAE-IIGFGESG------------------DANHITSPA-------------------PEGPLRAMK 281 (406)
T ss_pred ccHHHHHHCCCeEEEE-EEeEEccC------------------CCCCCCCCC-------------------HHHHHHHHH
Confidence 97542 1222 3221 11000000 000000110 023458899
Q ss_pred HHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchh--hhhcccccCccccChHHHHHHH---HHHcCCCC-
Q 015758 309 SALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMER--VISNLANYGNTSAASIPLALDE---AVRSGKVK- 377 (401)
Q Consensus 309 ~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~--~~~~l~~~Gn~~sasi~~~L~~---~l~~g~~~- 377 (401)
++|+++|+ +|||++..|..+.+..|. +.+.++-.... +..+...+||+.+|+-.+.+.- +++++.+.
T Consensus 282 ~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp 359 (406)
T PRK08439 282 AALEMAGN--PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPP 359 (406)
T ss_pred HHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCC
Confidence 99999998 799999999988765444 45556533222 2245678999999887664433 24444211
Q ss_pred -----------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 378 -----------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 378 -----------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+-+++|..+||.|.+.++++|+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~ 404 (406)
T PRK08439 360 TINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFK 404 (406)
T ss_pred CCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEe
Confidence 2256788999999999999986
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.1e-15 Score=147.20 Aligned_cols=249 Identities=18% Similarity=0.134 Sum_probs=174.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
.+.++.+|+.+|++++|+++|++|++||.+++++..+... ...+..+...+|++.+.+++.|+++|+|++.|+..|.+
T Consensus 22 ~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~~CaSG~~A~~~A~~ 101 (387)
T PRK07850 22 SGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAG 101 (387)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEecccccHHHHHHHHHH
Confidence 3568899999999999999999999999999998653222 12355777779996569999999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCC---CCC-----------CCC--------------------------------------
Q 015758 190 HIRGGGFRNVLVIGGDALSRFT---DWT-----------DRG-------------------------------------- 217 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~~---~~~-----------dr~-------------------------------------- 217 (401)
.|++|.++.+|+++.|.+|+.. .+. +..
T Consensus 102 ~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~ 181 (387)
T PRK07850 102 LIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWA 181 (387)
T ss_pred HHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987421 000 000
Q ss_pred ----------------------------------------------------------ccccccceeEEEEEeeccCC-C
Q 015758 218 ----------------------------------------------------------SCILFGDAAGAVLVQACDSE-D 238 (401)
Q Consensus 218 ----------------------------------------------------------~~~lfGDGAaAvll~~~~~~-~ 238 (401)
++...+|||+|+||.+.+.. +
T Consensus 182 ~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~sDGAaa~vl~see~A~~ 261 (387)
T PRK07850 182 EGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQISDGAAAVLWMDEDRARA 261 (387)
T ss_pred cCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCcCCceEEEEEecHHHHHH
Confidence 00012233344433332100 0
Q ss_pred CCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCC
Q 015758 239 DGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLT 317 (401)
Q Consensus 239 ~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~ 317 (401)
.++-. ..+. .+.....+ .. ........+++++|+++|++
T Consensus 262 l~~~p~~~i~------------------------------------g~~~~~~~-~~---~~~~~~~~a~~~al~~agl~ 301 (387)
T PRK07850 262 LGLRPRARIV------------------------------------AQALVGAE-PY---YHLDGPVQATAKVLEKAGMK 301 (387)
T ss_pred cCCCCcEEEE------------------------------------EEEEeccC-ch---hhcchHHHHHHHHHHHcCCC
Confidence 00000 0000 00000000 00 01123458899999999999
Q ss_pred cCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhhee
Q 015758 318 MSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGS 395 (401)
Q Consensus 318 ~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a 395 (401)
++|||.+-+|-......-...+.||++.++++.+ .--+||...++-...+.+++.+-+-+.|.+.+...++.|..-.+
T Consensus 302 ~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g~a 381 (387)
T PRK07850 302 IGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALSTG 381 (387)
T ss_pred HHHcCeeeecccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCceeE
Confidence 9999999999998877777789999988776543 23789999999999988888865445667778877888888888
Q ss_pred eEEEe
Q 015758 396 AILRW 400 (401)
Q Consensus 396 ~llr~ 400 (401)
+++++
T Consensus 382 ~~~e~ 386 (387)
T PRK07850 382 TIIER 386 (387)
T ss_pred EEEEe
Confidence 88875
|
|
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=138.15 Aligned_cols=108 Identities=31% Similarity=0.480 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhh---hcccccCccccChHHHHHH
Q 015758 292 GKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVI---SNLANYGNTSAASIPLALD 368 (401)
Q Consensus 292 g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~---~~l~~~Gn~~sasi~~~L~ 368 (401)
.+++...+.+.++++++++|++.|++..|+++|++|+++++|++.+++.|+++++++. .++++|||++|+++++.|+
T Consensus 31 s~~vP~~i~~~i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~ 110 (151)
T PF02797_consen 31 SKEVPDLISDNIPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLE 110 (151)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHH
T ss_pred hhHhHHHHHHHHHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHH
Confidence 4578888889999999999999999977888999999999999999999999999985 5899999999999999999
Q ss_pred HHHH----cCCCCC---CCEEEEEeeehhhhheeeEEE
Q 015758 369 EAVR----SGKVKP---GHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 369 ~~l~----~g~~~~---Gd~ill~~~G~G~s~~a~llr 399 (401)
++++ ++.... ++++++++||+|+|..+++||
T Consensus 111 ~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr 148 (151)
T PF02797_consen 111 RMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLR 148 (151)
T ss_dssp HHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEE
T ss_pred HHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEe
Confidence 9988 344332 489999999999999999998
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4e-15 Score=148.83 Aligned_cols=279 Identities=14% Similarity=0.054 Sum_probs=173.9
Q ss_pred CCCCHHHHHHHHHHHHHHh-CCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQM-AEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+.++.+|+.+|++++|++ +|++|++||.+|+++..+... ...+..++..+|++.+.+++.|+++|+|++.|+.+|.
T Consensus 22 ~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~~CaSG~~Av~~A~ 101 (400)
T PRK13359 22 SSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAA 101 (400)
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEeccchhHHHHHHHHH
Confidence 3567899999999999997 599999999999998765432 3457889999999867999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC--CCC------------CC--------------Cc-----------c----------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT--DWT------------DR--------------GS-----------C---------- 219 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~--~~~------------dr--------------~~-----------~---------- 219 (401)
++|++|..+.+|+++.|.+|+.. .+. ++ .. .
T Consensus 102 ~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~ 181 (400)
T PRK13359 102 RAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQ 181 (400)
T ss_pred HHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccCCHHHHHHHHHHHhCCCHHHH
Confidence 99999999999999999988521 000 00 00 0
Q ss_pred -----------------ccccc----------eeEEEEEeeccCCCC----CeeEEEEeecCCCCCceeeeccCCCcccc
Q 015758 220 -----------------ILFGD----------AAGAVLVQACDSEDD----GLISFDVHSDGEGGRHLNACIKGNQTNDA 268 (401)
Q Consensus 220 -----------------~lfGD----------GAaAvll~~~~~~~~----gl~~~~~~s~g~~~~~l~~~~~~~~~~~~ 268 (401)
..|-+ ....++|+.++..++ .+.......+.. ..++......
T Consensus 182 d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~l~p~f~~~--g~lT~~n~~~----- 254 (400)
T PRK13359 182 DAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAKLKGVVRPD--GTVTAGNASG----- 254 (400)
T ss_pred HHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhcCCCccCCC--CceecccccC-----
Confidence 00111 000011222110000 000000000000 0011111100
Q ss_pred cCCCCcccccCC------CC-CCcccEE---Ec--hHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH
Q 015758 269 LGSNGSVLAFPP------QH-YSYSSIY---MN--GKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA 336 (401)
Q Consensus 269 ~~~~G~~~~~p~------~~-~~~~~~~---m~--g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~ 336 (401)
+.+++..+-+.. .. ..+.++. .. ....+ ......+++++|+++|++++|||++.+|-......-.
T Consensus 255 ~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~---~~~~~~A~~~al~~AGl~~~DID~iei~dafa~~~l~ 331 (400)
T PRK13359 255 VNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVM---GIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLA 331 (400)
T ss_pred ccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCcc---chhHHHHHHHHHHHhCCCHHHcCcCccCcHhHHHHHH
Confidence 000000000000 00 0000000 00 00000 0123478899999999999999999999888877778
Q ss_pred HHHHcCCCc--hhhhhccc--ccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 337 VANRLDVPM--ERVISNLA--NYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 337 i~~~lgl~~--e~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
..+.||+.. .++..+-. -+||+..++-...+.+++++-+-+.|.+.+...++.|..-.+++++.
T Consensus 332 ~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 332 VLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred HHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEEEEcccCCceeEEEEEe
Confidence 889999944 45544444 48999999988888888876544567788888888888888888874
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-14 Score=146.84 Aligned_cols=290 Identities=18% Similarity=0.184 Sum_probs=186.3
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCC-------chhhhhhhcCcceeE---e-------cC-----CCCCHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDT-------SDEWISVRTGIRNRR---V-------LS-----GKESLTGLAVEA 123 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~-------~~~~i~~~~Gi~~R~---~-------~~-----~~e~~~~la~~A 123 (401)
+.|.|.|+|...|.-. +.+++++.+.. .+++.....++..+. + .. .-.....++..+
T Consensus 12 ~~VvItGig~~sp~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~~~~~~~~~~~d~~~~~~l~a 90 (418)
T PRK07910 12 PNVVVTGIAMTTALAT-DAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTRVELRRMSYLQRMSTVL 90 (418)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccccCCHHHHhhccHHHHHHHHH
Confidence 5799999999999865 77888775421 111111111111110 0 00 012356789999
Q ss_pred HHHHHHhCCC---CcCCCCEEEEEecCCCC--------------------------CC-chHHHHHHHcCCCCCCeeEee
Q 015758 124 ASRALQMAEV---NPEDVDLVLMCTSTPED--------------------------LF-GGATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 124 a~~aL~~agi---~~~~Id~li~~t~~~~~--------------------------~~-~~a~~i~~~lGl~~~~~~~~i 173 (401)
+++||+++|+ +++++.. +++++.+.. .. ..+.++...+|++ .+.+.+
T Consensus 91 a~~AledAg~~~~~~~r~Gv-~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~--G~~~ti 167 (418)
T PRK07910 91 GRRVWENAGSPEVDTNRLMV-SIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK--AGVITP 167 (418)
T ss_pred HHHHHHHcCCCCCCcccEEE-EEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC--CCcccc
Confidence 9999999996 4445544 445543210 01 1356788889984 678899
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC-C----------C-CC-----------CCC-CCccccccceeEEE
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS-R----------F-TD-----------WTD-RGSCILFGDAAGAV 229 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s-~----------~-~~-----------~~d-r~~~~lfGDGAaAv 229 (401)
.++|++++.||..|.++|++|+++.+++.++|... . . +. +-| +...+++|||++++
T Consensus 168 ~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gEGaa~v 247 (418)
T PRK07910 168 VSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGALM 247 (418)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeeceEEEE
Confidence 99999999999999999999999999999999742 1 0 11 111 22457999999999
Q ss_pred EEeeccC-CCCC--e----eEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHH
Q 015758 230 LVQACDS-EDDG--L----ISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302 (401)
Q Consensus 230 ll~~~~~-~~~g--l----~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~ 302 (401)
||++.+. .+.| + .++...+|+. ++ ..|. .++ ..
T Consensus 248 vLe~~~~A~~rg~~i~a~i~g~~~~~dg~---~~--------------------~~~~---------~~~--------~~ 287 (418)
T PRK07910 248 VIETEEHAKARGANILARIMGASITSDGF---HM--------------------VAPD---------PNG--------ER 287 (418)
T ss_pred EEeeHHHHHhCCCcEEEEEEEEEEecCCC---CC--------------------CCCC---------CCH--------HH
Confidence 9998542 1122 2 2222222221 10 0110 011 23
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHcC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRSG 374 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~g 374 (401)
..++++++|+++|++++|||++..|..+.+..| .+.+.+|-..-.+..+...+||+.+|+-.+.|... ++++
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~ 367 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDG 367 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCceeCccccccccHHHHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999998875544 45666773211233567799999888776654433 3333
Q ss_pred CC----------------------CC--CCEEEEEeeehhhhheeeEEE
Q 015758 375 KV----------------------KP--GHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~----------------------~~--Gd~ill~~~G~G~s~~a~llr 399 (401)
.+ ++ -.+++..+||.|.+-.+++++
T Consensus 368 ~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~ 416 (418)
T PRK07910 368 VIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFG 416 (418)
T ss_pred ccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEe
Confidence 21 11 246788999999999999987
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.9e-15 Score=148.50 Aligned_cols=204 Identities=25% Similarity=0.261 Sum_probs=140.9
Q ss_pred hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC---------------C-CCCCC
Q 015758 154 GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT---------------D-WTDRG 217 (401)
Q Consensus 154 ~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~---------------~-~~dr~ 217 (401)
.+.+|+..||++ .+.+.+..+|++++.||..|.++|++|.++.|||+++|..+... + +..+.
T Consensus 139 ~a~~ia~~lgl~--Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~~~ 216 (392)
T PRK09185 139 LADFLRAYLGLS--GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSANR 216 (392)
T ss_pred HHHHHHHHhCCC--CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcCCC
Confidence 378899999994 68999999999999999999999999999999999999654321 1 12223
Q ss_pred ccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHH
Q 015758 218 SCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFR 297 (401)
Q Consensus 218 ~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~ 297 (401)
..+++|||++++||++.+...-.+.++...+++. ++ ..|. .++
T Consensus 217 ~G~~~gEGaa~vVLe~~~~~~~~I~g~g~~~d~~---~~--------------------~~~~---------~~~----- 259 (392)
T PRK09185 217 DGINIGEAAAFFLLEREDDAAVALLGVGESSDAH---HM--------------------SAPH---------PEG----- 259 (392)
T ss_pred CccceeceEEEEEEEEcCCCcEEEEEEEEeCCCC---CC--------------------CCCC---------CCH-----
Confidence 4578999999999998631111122222222210 00 0010 001
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhhhcccccCccccChHHHHHHHHH-
Q 015758 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVISNLANYGNTSAASIPLALDEAV- 371 (401)
Q Consensus 298 ~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l- 371 (401)
....++++++|+++|++++|||++.+|..+.+..| .+.+.++-.. .+..+...+||+.+|+-.+.|...+
T Consensus 260 ---~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~s~K~~~Gh~~~AaG~~~l~~~~~ 335 (392)
T PRK09185 260 ---LGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCSSTKGLTGHTLGAAGAVEAAICWL 335 (392)
T ss_pred ---HHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ceeCCCcccccChhhcchHHHHHHHH
Confidence 23457899999999999999999999999876544 3455555211 1334567899999998777665543
Q ss_pred --HcCCCC------------------------CCCEEEEEeeehhhhheeeEEEe
Q 015758 372 --RSGKVK------------------------PGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 372 --~~g~~~------------------------~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+++.+. +-++++..+||.|.+..+++|+=
T Consensus 336 ~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 336 ALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred HHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 333211 13678999999999999999873
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.5e-15 Score=149.49 Aligned_cols=98 Identities=18% Similarity=0.181 Sum_probs=85.8
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+.+..+|+.+|++++|+++|++|++||.++++++.+... ...+..++..+|++...+++.|+++|++++.|+..|.++
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~aCaSG~~Ai~~Aa~~ 104 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAES 104 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehhhhHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998654222 224567889999965689999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 015758 191 IRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~ 209 (401)
|++|.++.+|+++.|.+|.
T Consensus 105 I~sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 105 IMAGTIDIGIAGGADSSSV 123 (428)
T ss_pred HHCCCCCEEEEecccccCC
Confidence 9999999999999998874
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-15 Score=151.00 Aligned_cols=97 Identities=29% Similarity=0.330 Sum_probs=85.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
+.+..+|+.+|++++|+++|+++++||.||+++.++.... ..+..++..+|++.+.++++++.+|+|++.++..|.++|
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~~CaSg~~al~~A~~~I 103 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANI 103 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccchhhHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999887653332 357789999999646899999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 015758 192 RGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~ 209 (401)
++|.+++||++++|.+|+
T Consensus 104 ~sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 104 ALGRADLVLAGGVEAMSH 121 (426)
T ss_pred HCCCCCEEEEEEEecccC
Confidence 999999999999997653
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-15 Score=150.22 Aligned_cols=248 Identities=18% Similarity=0.207 Sum_probs=171.0
Q ss_pred CCCCHHHHHHHHHHHHHHhC-CCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMA-EVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+.+..+|+.+|+++||+++ |++|+|||.+++++..+... +..+..++..+|++ +.++++++++|+++..++..|.
T Consensus 23 ~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~~caSG~~av~~Aa 101 (406)
T PRK07851 23 KDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAF 101 (406)
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeeeccchhHHHHHHHHH
Confidence 35688999999999999997 99999999999886543322 23467899999994 5889999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC-------------------------------CCCCCC--------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT-------------------------------DWTDRG-------------------- 217 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~-------------------------------~~~dr~-------------------- 217 (401)
++|++|.++.|||+++|.+|... .|.++.
T Consensus 102 ~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~amg~~a~~~~ 181 (406)
T PRK07851 102 HAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAENVA 181 (406)
T ss_pred HHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 99999999999999989755321 000000
Q ss_pred ----------------------------------------------------------------------------cccc
Q 015758 218 ----------------------------------------------------------------------------SCIL 221 (401)
Q Consensus 218 ----------------------------------------------------------------------------~~~l 221 (401)
.+..
T Consensus 182 ~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~ 261 (406)
T PRK07851 182 QLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLKPVFRPDGTVTAGNACP 261 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCCCccCCCCcEecCcCCc
Confidence 0001
Q ss_pred ccceeEEEEEeeccCC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHH
Q 015758 222 FGDAAGAVLVQACDSE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFA 299 (401)
Q Consensus 222 fGDGAaAvll~~~~~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~ 299 (401)
++|||+|+||++.+.. +.+.-. ..+... |.. ..+ .....
T Consensus 262 ~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~-----------------------~~~-~~~-------------~~~~~-- 302 (406)
T PRK07851 262 LNDGAAAVVIMSDTKARELGLTPLARIVST-----------------------GVS-GLS-------------PEIMG-- 302 (406)
T ss_pred cCCceeEEEEccHHHHHHcCCCccEEEEEE-----------------------EEc-cCC-------------CCccc--
Confidence 1233333333321100 000000 000000 000 000 00000
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCC
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVK 377 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~ 377 (401)
.....+++++|+++|++++|||++-+|-......-...+.||+.+++++.+ .--+||+..++-...+.+++.+-+-+
T Consensus 303 -~~~~~a~~~al~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~ 381 (406)
T PRK07851 303 -LGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH 381 (406)
T ss_pred -hhHHHHHHHHHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc
Confidence 123578999999999999999999998887776667778999987766533 34689999999998888888765445
Q ss_pred CCCEEEEEeeehhhhheeeEEEe
Q 015758 378 PGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 378 ~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
.|.+.|...++.|..-.++++++
T Consensus 382 ~~~~g~~~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 382 DKTFGLETMCVGGGQGMAMVLER 404 (406)
T ss_pred CCCeEEEEEccccChhhEEEEEe
Confidence 67788888899999989999885
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-15 Score=176.11 Aligned_cols=293 Identities=15% Similarity=0.207 Sum_probs=191.5
Q ss_pred ccccCCeEEEEEEEEcCCCccChHHHHhhhCC--------c-hhhhh-----------------------------hhcC
Q 015758 62 RLINRGCKLVGCGSAVPTLQISNDDLAKIVDT--------S-DEWIS-----------------------------VRTG 103 (401)
Q Consensus 62 ~~~~~~v~I~gig~~lP~~~v~~~~l~~~~~~--------~-~~~i~-----------------------------~~~G 103 (401)
|+..++|.|+|+|+.+|.. .+.+++++.+.. + ++|-. ..+|
T Consensus 3 ~~~~~~IAIvGmg~~~P~a-~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~ 81 (2582)
T TIGR02813 3 RLKDMPIAIVGMASIFANS-RYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFG 81 (2582)
T ss_pred CCCCCCEEEEeeeeeCCCC-CCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcC
Confidence 4456789999999999985 477888775421 1 12211 1112
Q ss_pred cceeEecCCCCCHHHHHHHHHHHHHHhCCCCc----CCCCEEEEEecCCC------------------------------
Q 015758 104 IRNRRVLSGKESLTGLAVEAASRALQMAEVNP----EDVDLVLMCTSTPE------------------------------ 149 (401)
Q Consensus 104 i~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~----~~Id~li~~t~~~~------------------------------ 149 (401)
|..+.... -+....|+.+++++||+++|+.+ ++++. +++++.+.
T Consensus 82 i~p~ea~~-mDpqqrl~L~~a~eALedAG~~~~~~~~r~GV-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (2582)
T TIGR02813 82 LPPNILEL-TDISQLLSLVVAKEVLNDAGLPDGYDRDKIGI-TLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSE 159 (2582)
T ss_pred CCHHHHHh-cCHHHHHHHHHHHHHHHhCCCCCCCCCCCEEE-EEEECCCcccchhhhhhhcchhhhhhhhccccchhhHH
Confidence 21111111 13456789999999999999853 34443 44432210
Q ss_pred ----------------CCCc-----hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC
Q 015758 150 ----------------DLFG-----GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS 208 (401)
Q Consensus 150 ----------------~~~~-----~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s 208 (401)
...+ .+.+|+..||++ .+.+.|+++|+|++.||++|.+.|++|+++.+|+.|++...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~--Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~ 237 (2582)
T TIGR02813 160 MLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLG--GMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDN 237 (2582)
T ss_pred HhhhhhcccccccCccccccccccHHHHHHHHHhCCC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeC
Confidence 0011 278999999994 89999999999999999999999999999999999988632
Q ss_pred C-----------CC------C-CCCCCccccccceeEEEEEeecc-CC--CCCeeE----EEEeecCCCCCceeeeccCC
Q 015758 209 R-----------FT------D-WTDRGSCILFGDAAGAVLVQACD-SE--DDGLIS----FDVHSDGEGGRHLNACIKGN 263 (401)
Q Consensus 209 ~-----------~~------~-~~dr~~~~lfGDGAaAvll~~~~-~~--~~gl~~----~~~~s~g~~~~~l~~~~~~~ 263 (401)
. .+ + |+.+...+++|+|++++||++-+ .. ++.|+. +...+||.. .+++
T Consensus 238 ~p~~~~~fs~~~~lS~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~-~~it------ 310 (2582)
T TIGR02813 238 SPFMYMSFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKF-KSIY------ 310 (2582)
T ss_pred CHHHHHHHHhccCcCCCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCC-CCCc------
Confidence 1 01 1 12233467999999999999743 22 233332 333333311 1111
Q ss_pred CcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHH
Q 015758 264 QTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVA 338 (401)
Q Consensus 264 ~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~ 338 (401)
.|. .....++|+++|+++|++++||+++..|..+....| .+.
T Consensus 311 --------------aP~-------------------~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~ 357 (2582)
T TIGR02813 311 --------------APR-------------------PEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLV 357 (2582)
T ss_pred --------------CCC-------------------HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHH
Confidence 111 022358899999999999999999999998876654 455
Q ss_pred HHcCCCc---hhhh--hcccccCccccChHHHHHHHH---HHcCCCC--------------------------------C
Q 015758 339 NRLDVPM---ERVI--SNLANYGNTSAASIPLALDEA---VRSGKVK--------------------------------P 378 (401)
Q Consensus 339 ~~lgl~~---e~~~--~~l~~~Gn~~sasi~~~L~~~---l~~g~~~--------------------------------~ 378 (401)
+.|+-.. ..+. ++..++||+.+|+-...|... ++++.+. .
T Consensus 358 ~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~ 437 (2582)
T TIGR02813 358 SVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQRED 437 (2582)
T ss_pred HHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCC
Confidence 6666432 1222 456799999988887776554 3333111 1
Q ss_pred C--CEEEEEeeehhhhheeeEEE
Q 015758 379 G--HTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 379 G--d~ill~~~G~G~s~~a~llr 399 (401)
+ .+.++.+||.|.+...++|+
T Consensus 438 ~~~r~a~vnsfGfGGtN~hvvle 460 (2582)
T TIGR02813 438 GTPRRAGISSFGFGGTNFHMVLE 460 (2582)
T ss_pred CCccEEEEeCccCCCeeEEEEEe
Confidence 1 46788999999999999986
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.2e-14 Score=141.41 Aligned_cols=284 Identities=17% Similarity=0.125 Sum_probs=181.7
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh--CCch-hh-------h-hhhcC-------cceeEecCCCCCHHHHHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV--DTSD-EW-------I-SVRTG-------IRNRRVLSGKESLTGLAVEAASRA 127 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~--~~~~-~~-------i-~~~~G-------i~~R~~~~~~e~~~~la~~Aa~~a 127 (401)
+.|.|.|+|...|--. +.|++++.+ +.+. .+ + ....| +..|.....-+....|+..|+++|
T Consensus 6 ~rVvITGiG~vsp~G~-~~e~~w~aL~~G~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~a~~Aa~~A 84 (398)
T PRK06519 6 NDVVITGIGLVSSLGE-GLDAHWNALSAGRPQPNVDTETFAPYPVHPLPEIDWSQQIPKRGDQRQMETWQRLGTYAAGLA 84 (398)
T ss_pred CCEEEEcceEECCCCC-CHHHHHHHHHcCCCCCCCCcccccCcCcccccccChhhcCCchhhhhccCHHHHHHHHHHHHH
Confidence 4689999999999876 667776654 1211 00 0 00000 111100001124678999999999
Q ss_pred HHhCCCCcCCCC----EEEEEecCCCC-----------------------------C----C----c--hHHHHHHHcCC
Q 015758 128 LQMAEVNPEDVD----LVLMCTSTPED-----------------------------L----F----G--GATQIPKALGC 164 (401)
Q Consensus 128 L~~agi~~~~Id----~li~~t~~~~~-----------------------------~----~----~--~a~~i~~~lGl 164 (401)
|+++|+++++.+ .++++|+.+.. . + + .+.+|+..+|+
T Consensus 85 l~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl 164 (398)
T PRK06519 85 LDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISIVHKV 164 (398)
T ss_pred HHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHHHhCC
Confidence 999999643321 24455543210 0 0 1 26789999999
Q ss_pred CCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CCC-----C-CCC----Ccccccc
Q 015758 165 KNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FTD-----W-TDR----GSCILFG 223 (401)
Q Consensus 165 ~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~~-----~-~dr----~~~~lfG 223 (401)
+ .+.+.+.++|++++.||..|.++|++|+++.+||.++|.... .+. + .|+ ...++.|
T Consensus 165 ~--Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~~~~r~G~v~G 242 (398)
T PRK06519 165 T--GSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGEDGGGFILG 242 (398)
T ss_pred C--CccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccCccCCCCeeee
Confidence 4 799999999999999999999999999999999999986321 111 1 122 3567899
Q ss_pred ceeEEEEEeeccCC-CCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHH
Q 015758 224 DAAGAVLVQACDSE-DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300 (401)
Q Consensus 224 DGAaAvll~~~~~~-~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~ 300 (401)
+||+++|||+.+.. ..| ++..-... + .+ + .+. ++
T Consensus 243 EGAa~lvLE~~~~A~~Rga~i~AeI~G~-~--~d------------------~----~~~----------~~-------- 279 (398)
T PRK06519 243 SGGAFLVLESREHAEARGARPYARISGV-E--SD------------------R----ARR----------AP-------- 279 (398)
T ss_pred ceEEEEEEeeHHHHHhCCCceEEEEEEE-e--ec------------------C----CCC----------Ch--------
Confidence 99999999985421 122 22111100 0 00 0 000 00
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhhhcccccCccccChHHHHHHH---HHH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVISNLANYGNTSAASIPLALDE---AVR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~---~l~ 372 (401)
..+.++|+++|+++|+ ++||||+..|..+.+..| .+.+.+++| +.++...+||+.+|+-.+.+.- +++
T Consensus 280 ~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p---vsS~Ks~~GH~l~AAGa~e~i~~~lal~ 355 (398)
T PRK06519 280 GDLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGP---VRGIGTLFGHTMEAQFPLGLALAALSVS 355 (398)
T ss_pred HHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCC---ccccchhhccchHHHHHHHHHHHHHHHh
Confidence 2345899999999999 799999999998876544 455667754 4567789999998887766543 345
Q ss_pred cCCCCCC-------------CEEEEEeeehhhhheeeEEE
Q 015758 373 SGKVKPG-------------HTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 ~g~~~~G-------------d~ill~~~G~G~s~~a~llr 399 (401)
+|.+.|- ...+.+++|.|.--|.++++
T Consensus 356 ~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (398)
T PRK06519 356 KGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVE 395 (398)
T ss_pred cCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEE
Confidence 5543221 33677888887766776664
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.1e-15 Score=148.26 Aligned_cols=244 Identities=18% Similarity=0.212 Sum_probs=165.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCC-cCCCCE----EEEEecCCCC-----------------C----C------chHHHHHHH
Q 015758 114 ESLTGLAVEAASRALQMAEVN-PEDVDL----VLMCTSTPED-----------------L----F------GGATQIPKA 161 (401)
Q Consensus 114 e~~~~la~~Aa~~aL~~agi~-~~~Id~----li~~t~~~~~-----------------~----~------~~a~~i~~~ 161 (401)
....+|+..|+++||+++|++ +++++. ++++++.+.. . + ..+.+|+..
T Consensus 75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 467899999999999999998 666543 4444443211 0 0 125788999
Q ss_pred cCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC-CC----------C------------CCCCC-C
Q 015758 162 LGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS-RF----------T------------DWTDR-G 217 (401)
Q Consensus 162 lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s-~~----------~------------~~~dr-~ 217 (401)
+|++ .+.+.|.++|++++.||..|.++|++|.++.+||+++|... .+ + ++-|+ .
T Consensus 155 ~~l~--Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 155 HKLK--GPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred hCCC--CcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 9994 78999999999999999999999999999999999999632 10 0 11111 2
Q ss_pred ccccccceeEEEEEeeccC-CCCC--ee----EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEE
Q 015758 218 SCILFGDAAGAVLVQACDS-EDDG--LI----SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYM 290 (401)
Q Consensus 218 ~~~lfGDGAaAvll~~~~~-~~~g--l~----~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m 290 (401)
..+++||||+++||++.+. .+.| ++ ++...+|+. ++ ..|..
T Consensus 233 ~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~---~~--------------------~~p~~--------- 280 (421)
T PTZ00050 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAH---HI--------------------TAPHP--------- 280 (421)
T ss_pred CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCC---CC--------------------CCCCC---------
Confidence 3468899999999998542 1122 22 121111110 00 01100
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH-cCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCc-hhhh--hcccccCccccC
Q 015758 291 NGKEVFRFAVRVVPQTIESALEK-AGLTMSSIDWLLLHQANQRIID-----AVANRLDVPM-ERVI--SNLANYGNTSAA 361 (401)
Q Consensus 291 ~g~~v~~~~~~~~~~~i~~aL~~-agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~-e~~~--~~l~~~Gn~~sa 361 (401)
++ ....++++++|++ +|++++|||++.+|..+....| .+.+.++-.. +.++ .+...+||+.+|
T Consensus 281 ~~--------~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~A 352 (421)
T PTZ00050 281 DG--------RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGA 352 (421)
T ss_pred Ch--------HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHH
Confidence 11 2345789999999 9999999999999998875543 4555565322 2232 456799999988
Q ss_pred hHHHHHHHH---HHcCCCC--------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 362 SIPLALDEA---VRSGKVK--------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 362 si~~~L~~~---l~~g~~~--------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+-.+.|... ++++.+. +=.+++..+||.|.+..+++|+
T Consensus 353 aG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 353 AGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred HHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 877766554 3433221 1156889999999999999986
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-14 Score=145.10 Aligned_cols=248 Identities=21% Similarity=0.201 Sum_probs=171.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCC-CCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPED-LFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~-~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
+.+..+|+.+|++++|+++|+++++||.+++++..... ....+..++..+|++.+.+++.|+.+|++++.++..|+++|
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I 101 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSI 101 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 56889999999999999999999999999988754311 11235568899999656788899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCC-----------------------C-CCCC-------------------------------
Q 015758 192 RGGGFRNVLVIGGDALSRFT-----------------------D-WTDR------------------------------- 216 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~~-----------------------~-~~dr------------------------------- 216 (401)
++|.++.||+++.|.+|+.. . +.++
T Consensus 102 ~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~s 181 (394)
T PLN02644 102 QLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQS 181 (394)
T ss_pred HcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99999999999988775210 0 0000
Q ss_pred --------------------------Cc-------------------------------------cccccceeEEEEEee
Q 015758 217 --------------------------GS-------------------------------------CILFGDAAGAVLVQA 233 (401)
Q Consensus 217 --------------------------~~-------------------------------------~~lfGDGAaAvll~~ 233 (401)
.. +...+|||+|+||++
T Consensus 182 ~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~s 261 (394)
T PLN02644 182 YERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVS 261 (394)
T ss_pred HHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEeccccCCCCcceEEEEecc
Confidence 00 001145555555544
Q ss_pred ccCC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHH
Q 015758 234 CDSE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESAL 311 (401)
Q Consensus 234 ~~~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL 311 (401)
.+.. +.+.-. ..+...+.. . +.+ ..+ ......+++++|
T Consensus 262 ~~~A~~~~~~~~a~I~g~~~~--------------------~---~~~--------------~~~---~~~~~~a~~~al 301 (394)
T PLN02644 262 GEKALELGLQVIAKIRGYADA--------------------A---QAP--------------ELF---TTAPALAIPKAL 301 (394)
T ss_pred HHHHHHCCCCeEEEEEEEEEc--------------------C---CCC--------------ccc---chhHHHHHHHHH
Confidence 3210 000000 000000000 0 000 000 011125899999
Q ss_pred HHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeeh
Q 015758 312 EKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGA 389 (401)
Q Consensus 312 ~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~ 389 (401)
+++|++++|||++-+|-......-...+.||+.+++++.+ .--+||+..++-...+.+++.+-+-+.|.+.+...++.
T Consensus 302 ~~Agi~~~Did~~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~ 381 (394)
T PLN02644 302 KHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNGKYGVAGICNG 381 (394)
T ss_pred HHcCCCHHHCCEEEeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999999999999999998888888889999988887643 33789999999988888888764445667777777888
Q ss_pred hhhheeeEEEe
Q 015758 390 GLTWGSAILRW 400 (401)
Q Consensus 390 G~s~~a~llr~ 400 (401)
|..-++++|++
T Consensus 382 gg~g~a~~~e~ 392 (394)
T PLN02644 382 GGGASAIVVEL 392 (394)
T ss_pred CCceeEEEEEe
Confidence 88888888875
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4e-15 Score=148.34 Aligned_cols=98 Identities=21% Similarity=0.197 Sum_probs=86.8
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+.++.+|+.+|++++|+++|++|++||.+++++..+... ...+.+++..+|++.+.+++.|+++|++++.|+..|.++
T Consensus 23 ~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~~~ 102 (392)
T PRK06633 23 STTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANS 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998754322 234677889999975699999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 015758 191 IRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~ 209 (401)
|++|.++.+|+++.|.+|+
T Consensus 103 I~sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 103 IMTGDNEIVIAGGQENMSL 121 (392)
T ss_pred HHcCCCCEEEEcccccCCC
Confidence 9999999999999998874
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=144.81 Aligned_cols=281 Identities=17% Similarity=0.116 Sum_probs=169.6
Q ss_pred CCCCHHHHHHHHHHHHHHh-CCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQM-AEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+.++.+|+.+|++++|++ +|++|++||.+++++..+... ...+..++..+|++.+.+++.|+++|+|++.|+..|.
T Consensus 21 ~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~a~ 100 (400)
T TIGR02430 21 SSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAA 100 (400)
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeechhhhHHHHHHHHH
Confidence 3668899999999999995 799999999999998754322 2357779999999756999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC---C-----CC------CCC-------c--ccccc----------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT---D-----WT------DRG-------S--CILFG---------------------- 223 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~---~-----~~------dr~-------~--~~lfG---------------------- 223 (401)
++|++|.++.+|+++.|.+|... . +. ++. . ...|+
T Consensus 101 ~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~~ae~~a~~ygisre~~ 180 (400)
T TIGR02430 101 RAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISREDQ 180 (400)
T ss_pred HHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccCcHHHHHHHHHHHhCcCHHHH
Confidence 99999999999999999987421 0 00 000 0 00010
Q ss_pred ceeE---------------------EEEE----------eeccCCCCC-----eeEEEEeecCCCC-Cceee-eccCCC-
Q 015758 224 DAAG---------------------AVLV----------QACDSEDDG-----LISFDVHSDGEGG-RHLNA-CIKGNQ- 264 (401)
Q Consensus 224 DGAa---------------------Avll----------~~~~~~~~g-----l~~~~~~s~g~~~-~~l~~-~~~~~~- 264 (401)
|--+ .+.+ ..+..-+.. +.......+..+. ...+. +..+..
T Consensus 181 d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p~g~lt~~~~s~~~DGAa 260 (400)
T TIGR02430 181 DAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAA 260 (400)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccCCCCEeccccCCcCCceE
Confidence 0000 1111 111000000 0000000000000 00000 011100
Q ss_pred ------cccccCCCCcccccCCC-CCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH
Q 015758 265 ------TNDALGSNGSVLAFPPQ-HYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV 337 (401)
Q Consensus 265 ------~~~~~~~~G~~~~~p~~-~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i 337 (401)
.+... ..|.. |.. -..+..... ...... .....+++++|+++|++++|||++-+|-.........
T Consensus 261 a~vl~s~e~A~-~~g~~---~~~~I~g~~~~~~-~~~~~~---~~~~~a~~~al~~Agl~~~DID~~ei~D~f~~~~l~~ 332 (400)
T TIGR02430 261 ALLLASEEAVQ-RHGLT---PRARILAAATAGV-EPRIMG---IGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAV 332 (400)
T ss_pred EEEEecHHHHH-HCCCC---ccEEEEEEEEecC-CCcccc---chHHHHHHHHHHHhCCCHHHCCCcccCcHHHHHHHHH
Confidence 00000 00000 000 000000000 000000 1234788999999999999999999998888777788
Q ss_pred HHHcCCCc--hhhhhccc--ccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 338 ANRLDVPM--ERVISNLA--NYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 338 ~~~lgl~~--e~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
.+.||+.+ +.+..+-. -+||+..++-...+.+++.+-+-+.|.+.+...+..|..-.++++++
T Consensus 333 ~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~g~a~~~e~ 399 (400)
T TIGR02430 333 LRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQGIALAIER 399 (400)
T ss_pred HHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccChhhEEEEEe
Confidence 89999955 45544433 58999988888887777776444567777777777777778888874
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-14 Score=144.35 Aligned_cols=249 Identities=17% Similarity=0.104 Sum_probs=169.5
Q ss_pred CCCCHHHHHHHHHHHHHHh-CCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQM-AEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+.++.+|+.+|++++|++ +|++|++||.+++++..+... ...+..++..+|++.+.+++.|+++|+|++.|+..|.
T Consensus 22 ~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~aCaSG~~Ai~~A~ 101 (401)
T PRK09050 22 SSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAA 101 (401)
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEecccccHHHHHHHHH
Confidence 3678899999999999995 799999999999998754322 2356779999999767999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC---C-----CC------CC--------------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT---D-----WT------DR-------------------------------------- 216 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~---~-----~~------dr-------------------------------------- 216 (401)
++|++|.++.+|+++.|.+|+.. . +. ++
T Consensus 102 ~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~~gisre~~ 181 (401)
T PRK09050 102 RAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNISRADQ 181 (401)
T ss_pred HHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccccHHHHHHHHHHHhCCCHHHH
Confidence 99999999999999999887421 0 00 00
Q ss_pred ----------------Cc-----------------------------------------------------cccccceeE
Q 015758 217 ----------------GS-----------------------------------------------------CILFGDAAG 227 (401)
Q Consensus 217 ----------------~~-----------------------------------------------------~~lfGDGAa 227 (401)
+. +..++|||+
T Consensus 182 D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~~g~lt~~n~s~~~DGAa 261 (401)
T PRK09050 182 DAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAA 261 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccCCCEEeCCCcCCCcCceE
Confidence 00 001223333
Q ss_pred EEEEeeccCC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHH
Q 015758 228 AVLVQACDSE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305 (401)
Q Consensus 228 Avll~~~~~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~ 305 (401)
|+||++.+.. +.+.-. ..+... +.. ..++ ... ......
T Consensus 262 a~vl~s~~~A~~lg~~p~a~I~g~-----------------------~~~-~~~~-------------~~~---~~~~~~ 301 (401)
T PRK09050 262 ALLLASEAAAKKHGLTPRARILGM-----------------------ATA-GVEP-------------RIM---GIGPAP 301 (401)
T ss_pred EEEEecHHHHHHCCCCccEEEEEE-----------------------EEe-ccCC-------------ccc---cchHHH
Confidence 3333332100 000000 000000 000 0000 000 012347
Q ss_pred HHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch--hhhhccc--ccCccccChHHHHHHHHHHcCCCCCCCE
Q 015758 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME--RVISNLA--NYGNTSAASIPLALDEAVRSGKVKPGHT 381 (401)
Q Consensus 306 ~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e--~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ 381 (401)
+++++|+++|++++|||++.+|-......-...+.||+.++ ++..+-. -+||+..++-...+.+++++-+-+.|.+
T Consensus 302 a~~~al~~Agl~~~DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~~~ 381 (401)
T PRK09050 302 ATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGGRY 381 (401)
T ss_pred HHHHHHHHcCCCHHHCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCCCe
Confidence 88999999999999999999999887777778899999653 4443433 4899999997777777766543356677
Q ss_pred EEEEeeehhhhheeeEEEe
Q 015758 382 IAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 382 ill~~~G~G~s~~a~llr~ 400 (401)
.+...++.|..-.+++++.
T Consensus 382 g~~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 382 ALCTMCIGVGQGIALAIER 400 (401)
T ss_pred EEEEEcccccceeEEEEEe
Confidence 7877788888878888874
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=143.63 Aligned_cols=240 Identities=18% Similarity=0.102 Sum_probs=166.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
.+.++.+|+..|.+++++ |++ ++||.+++++..+.. ...+..+...+|++.+.+++.|+++|++++.++..|.++|
T Consensus 21 ~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~-~~~~r~~~~~~Gl~~~~p~~tV~~~CaSG~~Ai~~a~~~I 96 (361)
T PRK06690 21 KDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG-GNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFI 96 (361)
T ss_pred CCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc-chHHHHHHHHcCCCCCCCceehhhhhhHHHHHHHHHHHHH
Confidence 356789999999999865 886 899999999875542 2235568899999657999999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCC-----C----C-CCC--------------------------------------C------
Q 015758 192 RGGGFRNVLVIGGDALSRFT-----D----W-TDR--------------------------------------G------ 217 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~~-----~----~-~dr--------------------------------------~------ 217 (401)
++|.++.+|++++|.+|... . + .+. .
T Consensus 97 ~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~ 176 (361)
T PRK06690 97 QGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEIL 176 (361)
T ss_pred HCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCcee
Confidence 99999999999999987420 0 1 000 0
Q ss_pred ------------c----------ccc--------------ccceeEEEEEeeccCC-CCCeeEE-EEeecCCCCCceeee
Q 015758 218 ------------S----------CIL--------------FGDAAGAVLVQACDSE-DDGLISF-DVHSDGEGGRHLNAC 259 (401)
Q Consensus 218 ------------~----------~~l--------------fGDGAaAvll~~~~~~-~~gl~~~-~~~s~g~~~~~l~~~ 259 (401)
. -.+ .+|||+|+||.+.+.. +.+.-.. .+...+.
T Consensus 177 ~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~-------- 248 (361)
T PRK06690 177 SFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAV-------- 248 (361)
T ss_pred cccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEE--------
Confidence 0 011 2577777777654310 1110000 0000000
Q ss_pred ccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHH
Q 015758 260 IKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVAN 339 (401)
Q Consensus 260 ~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~ 339 (401)
. +. .+. .+ ......+++++|+++|++++|||++.+|+++........+
T Consensus 249 -~-----------~~---~~~--------~~---------~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~~~~e 296 (361)
T PRK06690 249 -V-----------GV---DPN--------LP---------GTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAK 296 (361)
T ss_pred -e-----------cc---Ccc--------cc---------hhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHHHHHH
Confidence 0 00 000 00 1233478899999999999999999999999999999999
Q ss_pred HcCCCchhhhhc------ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEE
Q 015758 340 RLDVPMERVISN------LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 340 ~lgl~~e~~~~~------l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.||+++++++.+ ...+|+++...++..+.++.+. .+.+.+...++.|..-.+++++
T Consensus 297 ~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~----~~~~g~~~~c~~gG~g~a~~~e 358 (361)
T PRK06690 297 ELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE----DMKYGIATLGIGGGIGLALLFE 358 (361)
T ss_pred hcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh----CCCEEEEEEcccCcceeEEEEE
Confidence 999999888755 5677888888888777776543 3455555555555555666654
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=144.79 Aligned_cols=226 Identities=18% Similarity=0.186 Sum_probs=156.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCC---CCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPED---LFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~---~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+++..+|+.+|++++|+++|+++++||.|+++++.+.. ....+..+...+|++ ..++++|+++|+|++.+|..|.
T Consensus 18 ~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~~~CaSg~~Al~~A~ 96 (389)
T PRK07516 18 DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVENACATGSAAVYAAL 96 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeeccccHHHHHHHHHHH
Confidence 367889999999999999999999999999998764332 122233444566874 6889999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCC---C--------C-----------CC--------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRF---T--------D-----------WT-------------------------------- 214 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~---~--------~-----------~~-------------------------------- 214 (401)
++|++|.+++|||+++|.++.. . . +.
T Consensus 97 ~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A 176 (389)
T PRK07516 97 DAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANG 176 (389)
T ss_pred HHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 9999999999999999986521 0 0 00
Q ss_pred --CC-----C------------------------ccccccceeEEEEEeeccCCC-CCeeEEEEeecCCCCCceeeeccC
Q 015758 215 --DR-----G------------------------SCILFGDAAGAVLVQACDSED-DGLISFDVHSDGEGGRHLNACIKG 262 (401)
Q Consensus 215 --dr-----~------------------------~~~lfGDGAaAvll~~~~~~~-~gl~~~~~~s~g~~~~~l~~~~~~ 262 (401)
++ . .+..++|||+|+||.+++..+ .+- ...+...+...+..
T Consensus 177 ~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~-~v~i~g~~~~~~~~------ 249 (389)
T PRK07516 177 VANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQR-AVRFRARAHVNDFL------ 249 (389)
T ss_pred hcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCC-CEEEEEEEeccCcc------
Confidence 00 0 013468999999998754211 110 01111111000000
Q ss_pred CCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcC
Q 015758 263 NQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLD 342 (401)
Q Consensus 263 ~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lg 342 (401)
.+..... .. ......+++++|+++|++++|||.+-+|-......-...+.||
T Consensus 250 --------------~~~~~~~----~~----------~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~~~~~~e~lg 301 (389)
T PRK07516 250 --------------PLSRRDP----LA----------FEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIAELIEYEAMG 301 (389)
T ss_pred --------------cccCCCc----cc----------cHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHHHHHHHHHcC
Confidence 0000000 00 0233478899999999999999999999999888888889999
Q ss_pred CCch------------------hhhhc--ccccCccccChHHHHHHHHHHc
Q 015758 343 VPME------------------RVISN--LANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 343 l~~e------------------~~~~~--l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
+.+. ++..+ +--+||...|+-...+.+++.+
T Consensus 302 ~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~Q 352 (389)
T PRK07516 302 LAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQ 352 (389)
T ss_pred CCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHH
Confidence 8864 22221 2368999999999999888775
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.1e-15 Score=164.38 Aligned_cols=290 Identities=21% Similarity=0.278 Sum_probs=199.4
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCC---------ch------------------------------hhhhhhcCccee
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDT---------SD------------------------------EWISVRTGIRNR 107 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~---------~~------------------------------~~i~~~~Gi~~R 107 (401)
+|.|+|+++.+|+ .-+.+++++.+.. .+ ++...++||..|
T Consensus 5 ~IAIiGm~~rfPg-a~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPr 83 (1061)
T COG3321 5 PIAIIGMACRFPG-ADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPR 83 (1061)
T ss_pred cEEEEeccccCCC-CCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHH
Confidence 3899999999999 6688899886521 01 122346677666
Q ss_pred EecCCCCCHHHHHHHHHHHHHHhCCCCcCCCC----EEEEEecCCCCCC---------------c-----hHHHHHHHcC
Q 015758 108 RVLSGKESLTGLAVEAASRALQMAEVNPEDVD----LVLMCTSTPEDLF---------------G-----GATQIPKALG 163 (401)
Q Consensus 108 ~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id----~li~~t~~~~~~~---------------~-----~a~~i~~~lG 163 (401)
..... ++...|..+.+++|||++|++|+.+. .|+.+.+..++.. + .+.+|++.|+
T Consensus 84 EA~~m-DPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~ 162 (1061)
T COG3321 84 EAEAM-DPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLG 162 (1061)
T ss_pred HHHhc-CchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhc
Confidence 66544 37889999999999999999999887 4555555443321 0 3789999999
Q ss_pred CCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC---CC--------C-------CCCCCccccccce
Q 015758 164 CKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR---FT--------D-------WTDRGSCILFGDA 225 (401)
Q Consensus 164 l~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~---~~--------~-------~~dr~~~~lfGDG 225 (401)
+ +.+.+.|+++|++++.|+++|.+.|++|+++.+|+.++...-. ++ . +......++.|+|
T Consensus 163 l--~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG 240 (1061)
T COG3321 163 L--SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEG 240 (1061)
T ss_pred C--CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeee
Confidence 9 4899999999999999999999999999999999999877531 11 1 1112234789999
Q ss_pred eEEEEEeecc-CC--CCCeeEE----EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHH
Q 015758 226 AGAVLVQACD-SE--DDGLISF----DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRF 298 (401)
Q Consensus 226 AaAvll~~~~-~~--~~gl~~~----~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~ 298 (401)
+++++|.+-. .. ++.|+.. .+.+||... .++ .|.
T Consensus 241 ~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~-glt--------------------aP~------------------ 281 (1061)
T COG3321 241 AGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSN-GLT--------------------APN------------------ 281 (1061)
T ss_pred EEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcC-CCC--------------------CCC------------------
Confidence 9999999843 22 3334332 222222111 111 111
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchhhh----hcccccCccccChHHHHHHH
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMERVI----SNLANYGNTSAASIPLALDE 369 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~~~----~~l~~~Gn~~sasi~~~L~~ 369 (401)
...-.++++++|+++|+++++|+++-.|..+..+-|.++ +.++-..++-+ +...++||+.+|+-...|..
T Consensus 282 -~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK 360 (1061)
T COG3321 282 -LEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIK 360 (1061)
T ss_pred -HHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHH
Confidence 134458999999999999999999999999987766543 44443222222 45679999988877666655
Q ss_pred HHH---cCCC------------------------------CC--CCEEEEEeeehhhhheeeEEEe
Q 015758 370 AVR---SGKV------------------------------KP--GHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 370 ~l~---~g~~------------------------------~~--Gd~ill~~~G~G~s~~a~llr~ 400 (401)
.+- .+.+ +. -.+.-+.+||.|.|-+=+++++
T Consensus 361 ~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe 426 (1061)
T COG3321 361 TALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEE 426 (1061)
T ss_pred HHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEee
Confidence 433 2211 11 1345678899999888888864
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.2e-14 Score=143.62 Aligned_cols=97 Identities=19% Similarity=0.150 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
+.+..+|+.+|.+++|+++|++|++||.+++++..++.. ...+.+++..+|++.+.+++.|+++|++++.|+..|.+.
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~~CaSG~~Ai~~A~~~ 102 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARA 102 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeechhhhHHHHHHHHHHH
Confidence 678999999999999999999999999999998755432 234667889999975799999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 015758 191 IRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~ 209 (401)
|++|.++.+|+++.|.+|+
T Consensus 103 I~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 103 ITCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HHCCCCCEEEEEEecCCCC
Confidence 9999999999999998874
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-14 Score=144.53 Aligned_cols=236 Identities=17% Similarity=0.170 Sum_probs=155.4
Q ss_pred EecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCc---h-HHHHHHHcCCCCCCeeEeeCccChHHHHH
Q 015758 108 RVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFG---G-ATQIPKALGCKNNPLAYDITAACSGFLLG 183 (401)
Q Consensus 108 ~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~---~-a~~i~~~lGl~~~~~~~~i~~~C~~~~~a 183 (401)
++...+++..+|+.+|++++|+++|+++++||.+|+++++++.... . ........++. +.++++++++|++++.+
T Consensus 18 ~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~Casg~~a 96 (403)
T PRK06289 18 NWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW-GVPASRHEAACASGSVA 96 (403)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-CCceeecccccHHHHHH
Confidence 3444578999999999999999999999999999999887653321 0 11111233442 45789999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccCCCCC--------------C-------CC----------------------------
Q 015758 184 LVSAACHIRGGGFRNVLVIGGDALSRFT--------------D-------WT---------------------------- 214 (401)
Q Consensus 184 L~~A~~~l~~g~~~~vLvv~~d~~s~~~--------------~-------~~---------------------------- 214 (401)
|..|+.+|++|.+++|||+++|.++... + +.
T Consensus 97 l~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~ 176 (403)
T PRK06289 97 TLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAE 176 (403)
T ss_pred HHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999999999865210 0 00
Q ss_pred --------C-----CC-------------------------ccccccceeEEEEEeeccCC-CCCe--eEEEEeecCCCC
Q 015758 215 --------D-----RG-------------------------SCILFGDAAGAVLVQACDSE-DDGL--ISFDVHSDGEGG 253 (401)
Q Consensus 215 --------d-----r~-------------------------~~~lfGDGAaAvll~~~~~~-~~gl--~~~~~~s~g~~~ 253 (401)
+ +. .+...+|||+|+||.+++.. +.+. -...+...+...
T Consensus 177 ~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~ 256 (403)
T PRK06289 177 INFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRT 256 (403)
T ss_pred HHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEec
Confidence 0 00 00134699999999875421 1010 001111111100
Q ss_pred CceeeeccCCCcccccCCCCcccccCC-CCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHH
Q 015758 254 RHLNACIKGNQTNDALGSNGSVLAFPP-QHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQR 332 (401)
Q Consensus 254 ~~l~~~~~~~~~~~~~~~~G~~~~~p~-~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~ 332 (401)
.+.. .. +... ..... ..| .....+.+++++++|++++|||.+.+|-....
T Consensus 257 ~~~~--~~---------------~~~~~~~~~~--~~~----------~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~ 307 (403)
T PRK06289 257 APLG--LE---------------QKLDRSAGDP--YVL----------PHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP 307 (403)
T ss_pred cccc--cc---------------cccccccccc--ccc----------HHHHHHHHHHHHHcCCCHHHCeEEeeeccchH
Confidence 0000 00 0000 00000 001 12346889999999999999999999999998
Q ss_pred HHHHHHHHcCCCch------------------hhhhc--ccccCccccChHHHHHHHHHHc
Q 015758 333 IIDAVANRLDVPME------------------RVISN--LANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 333 i~~~i~~~lgl~~e------------------~~~~~--l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
..-...|.||+.+. +++.+ .--+||...++-...+.+++.+
T Consensus 308 ~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~Q 368 (403)
T PRK06289 308 SEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQ 368 (403)
T ss_pred HHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHH
Confidence 88889999998863 23322 2267999999999999888875
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.2e-16 Score=122.23 Aligned_cols=80 Identities=43% Similarity=0.728 Sum_probs=68.4
Q ss_pred EeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccceeEEEEEeeccCCCCCeeEEEEeecC
Q 015758 171 YDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDG 250 (401)
Q Consensus 171 ~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g 250 (401)
|||+++|+|++.||++|..+|++|..++||||++|..++++++.++.+.++|||||+|+||++.+....+++.+.+++||
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~~~~~~~il~~~~~tdG 80 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRDEEGGFGILDSHLRTDG 80 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEESSSSCEEEEEEEEE-G
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccccccCcceeecchheEEEEEecCCCCCeEEEEEEEcCC
Confidence 79999999999999999999999999999999999999988888777778999999999999975445678888888765
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.1e-14 Score=143.42 Aligned_cols=238 Identities=24% Similarity=0.191 Sum_probs=157.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
+++..+|+.+|+++||+++|++++|||.|++++.. +..+ ...+++.||++ ..+.+++..+|+++..+|..|.++|+
T Consensus 25 ~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~--~~~~-~~~la~~lGl~-~~~~~~~~~g~~s~~~al~~A~~~I~ 100 (384)
T PRK06158 25 GLSAMELLAQAAHRALADAGLTMADVDGLFTASPD--DALW-GLSVAEYLGIR-PRFVDGTMIGGSSFLAHLLPAALALE 100 (384)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC--CCCc-HHHHHHHcCCC-CeeeccccCccHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999988642 2222 35799999995 57788889999999999999999999
Q ss_pred cCCCCeEEEE-EeccCCCC------C---CCC-------------------------------------------CC---
Q 015758 193 GGGFRNVLVI-GGDALSRF------T---DWT-------------------------------------------DR--- 216 (401)
Q Consensus 193 ~g~~~~vLvv-~~d~~s~~------~---~~~-------------------------------------------dr--- 216 (401)
+|.+++|||+ +.+..+.. . +|. ++
T Consensus 101 sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~ 180 (384)
T PRK06158 101 AGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAF 180 (384)
T ss_pred cCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhh
Confidence 9999999998 44443310 0 010 00
Q ss_pred ----------------------CccccccceeEEEEEeeccCCC-CCeeEEEEeecCCCCCceeeeccCCCcccccCCCC
Q 015758 217 ----------------------GSCILFGDAAGAVLVQACDSED-DGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNG 273 (401)
Q Consensus 217 ----------------------~~~~lfGDGAaAvll~~~~~~~-~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G 273 (401)
..+..++|||+|+||.+.+..+ .+.-...+...+...+.. .
T Consensus 181 ~~~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~v~i~g~~~~~~~~----------------~ 244 (384)
T PRK06158 181 MRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPVYVLGAAAATWHR----------------Q 244 (384)
T ss_pred hCCCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCCCcEEEEEEEEecCCc----------------c
Confidence 0114679999999999754211 010001111101000000 0
Q ss_pred cccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch-------
Q 015758 274 SVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME------- 346 (401)
Q Consensus 274 ~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e------- 346 (401)
.... . ... .....++++++++++|++++|||++-+|-.....--...+.||+.+.
T Consensus 245 ----~~~~-~----------~~~---~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~ 306 (384)
T PRK06158 245 ----ISSM-P----------DLT---VTAAAESGPRAFAMAGLTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFV 306 (384)
T ss_pred ----cccc-c----------chh---hhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHH
Confidence 0000 0 000 12234788999999999999999999999998888888899998754
Q ss_pred ---------hhhhc----ccccCccccChHHHHHHHHHHcCC-------CCCCCEEEEEeeeh
Q 015758 347 ---------RVISN----LANYGNTSAASIPLALDEAVRSGK-------VKPGHTIAAAGFGA 389 (401)
Q Consensus 347 ---------~~~~~----l~~~Gn~~sasi~~~L~~~l~~g~-------~~~Gd~ill~~~G~ 389 (401)
+++-| +--+||. .++-...+.|+.++-+ ++.-++.+..++|.
T Consensus 307 ~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag~rQv~~a~~gl~~~~Gg 368 (384)
T PRK06158 307 EGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAGERQVAGAEVALAHGNGG 368 (384)
T ss_pred HCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCCCCcCCCCCEEEEECCCC
Confidence 12212 2257888 5566777777766421 22334566666664
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-14 Score=141.97 Aligned_cols=248 Identities=19% Similarity=0.149 Sum_probs=171.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCC-CCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPED-LFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~-~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
+.+..+|+.+|++++|+++|++|+|||.+++++..+.. ....+..++..+|++.+.+.+.++++|++++.++..|.++|
T Consensus 23 ~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I 102 (388)
T PRK06366 23 KIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREI 102 (388)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeechhhHHHHHHHHHHHHH
Confidence 46889999999999999999999999999998764332 12346778999999645799999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCC-------CCCC-------C----C----C--------------------------------
Q 015758 192 RGGGFRNVLVIGGDALSRF-------TDWT-------D----R----G-------------------------------- 217 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~-------~~~~-------d----r----~-------------------------------- 217 (401)
++|.++.||+++.|.++.. .++. + + .
T Consensus 103 ~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~A~~~~~~yGitrE~~a~v 182 (388)
T PRK06366 103 MLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADEY 182 (388)
T ss_pred hcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999998986621 0000 0 0 0
Q ss_pred -------------c-cc-----------------------------c--------------ccceeEEEEEeeccCC-CC
Q 015758 218 -------------S-CI-----------------------------L--------------FGDAAGAVLVQACDSE-DD 239 (401)
Q Consensus 218 -------------~-~~-----------------------------l--------------fGDGAaAvll~~~~~~-~~ 239 (401)
. .+ + ..|||+|+||.+++.. +.
T Consensus 183 Av~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l 262 (388)
T PRK06366 183 SVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEY 262 (388)
T ss_pred HHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHc
Confidence 0 00 0 1344444444432200 00
Q ss_pred CeeEE-EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 015758 240 GLISF-DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTM 318 (401)
Q Consensus 240 gl~~~-~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~ 318 (401)
+.-.. .+. .+.....+..... .....+++++|+++|+++
T Consensus 263 ~~~pv~~I~------------------------------------g~~~~~~~~~~~~----~~~~~A~~~al~~Agl~~ 302 (388)
T PRK06366 263 GLKPIARIT------------------------------------GYESASLDPLDFV----EAPIPATRKLLEKQNKSI 302 (388)
T ss_pred CCCcCEEEE------------------------------------EEEEEecCHHHhc----ccHHHHHHHHHHHcCCCH
Confidence 00000 000 0000000001111 112478899999999999
Q ss_pred CCcCEEEecccCHHHHHHHHHHcCCCchhhhhcc--cccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheee
Q 015758 319 SSIDWLLLHQANQRIIDAVANRLDVPMERVISNL--ANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSA 396 (401)
Q Consensus 319 ~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l--~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~ 396 (401)
+|||.+-+|-......-...+.||++.++++.+- --+||...|+-...+.+++.+-+-+.+.+.+...++.|..-.++
T Consensus 303 ~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~~~g~~~~c~~gg~g~a~ 382 (388)
T PRK06366 303 DYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMKTGLATLCHGGGGAHTL 382 (388)
T ss_pred HHcceeeccchhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCCCeEEEEEecccChhhEE
Confidence 9999999999999888889999999988776443 36899988888888877777543345567777777777777888
Q ss_pred EEEe
Q 015758 397 ILRW 400 (401)
Q Consensus 397 llr~ 400 (401)
++++
T Consensus 383 ~~e~ 386 (388)
T PRK06366 383 TLEM 386 (388)
T ss_pred EEEe
Confidence 8875
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.9e-14 Score=140.11 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=83.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
.+.+..+|+.+|++++|+++|+++++||.+++++..+... ...+..+.-..|++.+.+++.|+.+|+|++.|+..|.+
T Consensus 22 ~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~~CaSG~~Ai~~A~~ 101 (390)
T PRK06504 22 AGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQ 101 (390)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEechhhHHHHHHHHHHH
Confidence 3678999999999999999999999999999998764222 22344444445786678999999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCC
Q 015758 190 HIRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~ 209 (401)
+|++|.++.+|+++.|.+|+
T Consensus 102 ~I~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 102 AVMSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HHHCCCCCEEEEeeeeecCC
Confidence 99999999999999999874
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-14 Score=143.87 Aligned_cols=283 Identities=17% Similarity=0.217 Sum_probs=180.1
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCcceeEe----------cC-----CCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGIRNRRV----------LS-----GKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi~~R~~----------~~-----~~e~~~~la~~Aa 124 (401)
.|.|.|+|...|--. +.+++++.+ +.+ +++. ..++..+.. .. .-.....++..|+
T Consensus 3 rVvITG~G~vsp~G~-~~~~~w~~l~~G~sgi~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~a~~aa 79 (406)
T PRK07967 3 RVVITGLGIVSSIGN-NQQEVLASLREGRSGITFSPEFA--EMGMRSQVWGNVKLDPTGLIDRKVMRFMGDASAYAYLAM 79 (406)
T ss_pred cEEEEcceEECCCCC-CHHHHHHHHHcCCCceeECCccc--ccCCCCceEEEcCCChhhcCCHHHhhcCCHHHHHHHHHH
Confidence 589999999999875 677777654 111 1110 011111111 00 0123567899999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCCC-----------------------C---C--chHHHHHHHcCCCCCCeeEe
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPED-----------------------L---F--GGATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~~-----------------------~---~--~~a~~i~~~lGl~~~~~~~~ 172 (401)
++||+++|+++++++ .++++++.+.. . . ..+.+|+..+|++ .+.+.
T Consensus 80 ~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~--Gp~~t 157 (406)
T PRK07967 80 EQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK--GVNYS 157 (406)
T ss_pred HHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCC--CCccc
Confidence 999999999764432 24445532110 0 0 1367899999994 78999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------C------------CCCC-CCccccccceeEEE
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF----------T------------DWTD-RGSCILFGDAAGAV 229 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~----------~------------~~~d-r~~~~lfGDGAaAv 229 (401)
++.+|++++.||..|.++|++|+++.+||.++|..+.. + ++-| ....++.||||+++
T Consensus 158 vs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGaa~l 237 (406)
T PRK07967 158 ISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVV 237 (406)
T ss_pred cccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceEEEE
Confidence 99999999999999999999999999999999875421 0 1111 12457899999999
Q ss_pred EEeeccC-C--CCCeeE----EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHH
Q 015758 230 LVQACDS-E--DDGLIS----FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302 (401)
Q Consensus 230 ll~~~~~-~--~~gl~~----~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~ 302 (401)
|||+.+. . +..++. +...+|+. ++ .-| ++ +.
T Consensus 238 vLe~~~~A~~rga~i~a~i~G~g~~~d~~---~~--------------------~~p-----------~~--------~~ 275 (406)
T PRK07967 238 VVEELEHALARGAKIYAEIVGYGATSDGY---DM--------------------VAP-----------SG--------EG 275 (406)
T ss_pred EEeeHHHHHhCCCcEEEEEEEEEECCCCC---CC--------------------CCC-----------CH--------HH
Confidence 9997542 1 222322 21111110 10 011 11 34
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhhhcccccCccccChHHHHHHH---HHHcC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVISNLANYGNTSAASIPLALDE---AVRSG 374 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~---~l~~g 374 (401)
..++++++|+..+ . |||++..|..+.+..| .+.+.+|-..-.+..+...+||+.+|+-.+.+.. +++++
T Consensus 276 ~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~ 352 (406)
T PRK07967 276 AVRCMQMALATVD--T-PIDYINTHGTSTPVGDVKELGAIREVFGDKSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHG 352 (406)
T ss_pred HHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCHHHHHHHHHHhCCCCCeeECcccccccCccccchHHHHHHHHHHhcC
Confidence 4578888998544 4 9999999998876554 4556676321123356679999988877665422 34433
Q ss_pred CCC-------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 375 KVK-------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~~-------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+. +-++++..+||.|.+..+++|+
T Consensus 353 ~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~ 402 (406)
T PRK07967 353 FIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFR 402 (406)
T ss_pred cCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEE
Confidence 211 1256889999999999999986
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-14 Score=140.48 Aligned_cols=252 Identities=16% Similarity=0.110 Sum_probs=170.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
+.+..+|+.+|+++||+++|+++++||.+++++..++... ...++..+|++ +.++++++.+|++++.+|..|.++|+
T Consensus 19 ~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~-~~~~~~v~~~caSg~~ai~~A~~~I~ 95 (391)
T PRK08256 19 SWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMT-GIPIVNVNNNCSTGSTALFLARQAVR 95 (391)
T ss_pred CCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCC-CCCCcccccccHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999998877654322 23467789994 56889999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCC------------C-------------C-CCC-------------------------------
Q 015758 193 GGGFRNVLVIGGDALSRF------------T-------------D-WTD------------------------------- 215 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~~------------~-------------~-~~d------------------------------- 215 (401)
+|.++.|||+++|.++.. . . +..
T Consensus 96 sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~ 175 (391)
T PRK08256 96 SGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKAR 175 (391)
T ss_pred CCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 999999999999987521 0 0 000
Q ss_pred ------CC-------------------------ccccccceeEEEEEeeccCC-CCCee-EEEEeecCCCCCceeeeccC
Q 015758 216 ------RG-------------------------SCILFGDAAGAVLVQACDSE-DDGLI-SFDVHSDGEGGRHLNACIKG 262 (401)
Q Consensus 216 ------r~-------------------------~~~lfGDGAaAvll~~~~~~-~~gl~-~~~~~s~g~~~~~l~~~~~~ 262 (401)
+. .+...+|||+|+||.+.+.. +.++- ...+...+....
T Consensus 176 ~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~-------- 247 (391)
T PRK08256 176 RHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTD-------- 247 (391)
T ss_pred HhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEecc--------
Confidence 00 01245899999999975421 11110 011111000000
Q ss_pred CCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcC
Q 015758 263 NQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLD 342 (401)
Q Consensus 263 ~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lg 342 (401)
... .+... +..... .......+++++++++|++++|||.+.+|.......-...|.||
T Consensus 248 --~~~---------~~~~~---------~~~~~~--~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~~~l~~le~lg 305 (391)
T PRK08256 248 --TPS---------TFDGR---------SMIDLV--GYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSANELLTYEALG 305 (391)
T ss_pred --ccc---------ccccc---------cccccc--ccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcHHHHHHHHHcC
Confidence 000 00000 000000 01223478899999999999999999999999999889999999
Q ss_pred CCch------------------hhhhcc--cccCccccChHHHHHHHHHHcCC-------CCCCCEEEEEeeehhhhhee
Q 015758 343 VPME------------------RVISNL--ANYGNTSAASIPLALDEAVRSGK-------VKPGHTIAAAGFGAGLTWGS 395 (401)
Q Consensus 343 l~~e------------------~~~~~l--~~~Gn~~sasi~~~L~~~l~~g~-------~~~Gd~ill~~~G~G~s~~a 395 (401)
+.++ .++.+- --+||...|+-...+.|++.+-+ ++.....++.+.|.|.+.-.
T Consensus 306 ~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~~~~l~~~~G~~~~~~~ 385 (391)
T PRK08256 306 LCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGARLALQHNLGLGGACVV 385 (391)
T ss_pred CCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCccceEEEeccccceeEEE
Confidence 9876 443322 26799999988888888887522 23345677777785544433
Q ss_pred eE
Q 015758 396 AI 397 (401)
Q Consensus 396 ~l 397 (401)
.+
T Consensus 386 ~v 387 (391)
T PRK08256 386 TL 387 (391)
T ss_pred EE
Confidence 33
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.63 E-value=3e-14 Score=143.87 Aligned_cols=98 Identities=20% Similarity=0.194 Sum_probs=84.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+.+..+|+.+|++++|+++|++|++||.+++++..+.... ..+..++-..|++...+++.|+++|+|++.|+.+|.++
T Consensus 27 ~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~~~CaSG~~A~~~a~~~ 106 (430)
T TIGR02446 27 HGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAES 106 (430)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhhhhhhHHHHHHHHHHHH
Confidence 36689999999999999999999999999999987643221 23555555579965789999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 015758 191 IRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~ 209 (401)
|++|.++.+|+++.|.+|+
T Consensus 107 I~sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 107 IMAGAIDIGIAGGADSSSV 125 (430)
T ss_pred HHCCCCCEEEEeeeEcccC
Confidence 9999999999999999973
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-13 Score=137.47 Aligned_cols=225 Identities=19% Similarity=0.147 Sum_probs=153.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--Cc-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FG-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
+++..+|+.+|++++|+++|++++|||.+++++ +++.. .+ .+..+++.+|+. +.+.++|.++|+++..+|..|.+
T Consensus 26 ~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~-~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~~gasG~~al~~A~~ 103 (392)
T PRK06065 26 LETPQELAWEAASKALDEAGLELKDIDCVVIGS-APDAFDGVHMKGEYLSHGSGGI-RKPVSRVYVGGATGVMTAIAGWY 103 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cCCcccccccHHHHHHHHcCCC-CCCeEEEecCchhHHHHHHHHHH
Confidence 568899999999999999999999999999875 33322 12 577899999985 57889999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCC----------C-C--CC------------------------------------------
Q 015758 190 HIRGGGFRNVLVIGGDALSRF----------T-D--WT------------------------------------------ 214 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~----------~-~--~~------------------------------------------ 214 (401)
+|++|.+++|||+++|+++.. . + |.
T Consensus 104 ~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~ 183 (392)
T PRK06065 104 HVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALN 183 (392)
T ss_pred HHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhcc
Confidence 999999999999999985311 0 0 10
Q ss_pred CCC-------------------------ccccccceeEEEEEeeccCC-CCCeeEEEEeecCCCCCceeeeccCCCcccc
Q 015758 215 DRG-------------------------SCILFGDAAGAVLVQACDSE-DDGLISFDVHSDGEGGRHLNACIKGNQTNDA 268 (401)
Q Consensus 215 dr~-------------------------~~~lfGDGAaAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~ 268 (401)
++. .+...+|||+|+||.+.+.. +.+.-...+...+...+.. .
T Consensus 184 NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v~I~g~~~~~~~~-----------~ 252 (392)
T PRK06065 184 NPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTPVWVEGVGWTLDNT-----------E 252 (392)
T ss_pred CchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCcc-----------c
Confidence 000 01356899999999975411 1110001111111000000 0
Q ss_pred cCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCc--CCcCEEEecccCHHHHHHHHHHcCCCch
Q 015758 269 LGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTM--SSIDWLLLHQANQRIIDAVANRLDVPME 346 (401)
Q Consensus 269 ~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~--~dId~~i~Hq~~~~i~~~i~~~lgl~~e 346 (401)
+... .+ . .......+.+++++++|++. +|||.+-+|-....+.-...+.||+-+.
T Consensus 253 ---------~~~~--~~--~----------~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~ 309 (392)
T PRK06065 253 ---------WPNR--DL--A----------YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKR 309 (392)
T ss_pred ---------cccc--cc--c----------ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCC
Confidence 0000 00 0 01223368889999999985 9999999999988777777788886542
Q ss_pred ----------------hhhhc----ccccCccccChHHHHHHHHHHc
Q 015758 347 ----------------RVISN----LANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 347 ----------------~~~~~----l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
+++.| +--+||...++-...+.+++++
T Consensus 310 G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~Q 356 (392)
T PRK06065 310 GEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQ 356 (392)
T ss_pred CcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHH
Confidence 11111 2258999999989888888775
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.7e-14 Score=140.32 Aligned_cols=247 Identities=19% Similarity=0.139 Sum_probs=168.7
Q ss_pred CCCHHHHHHHHHHHHHHh-CCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQM-AEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
+....+|+.++++++|++ +|++|++||.+++++..+... ...+.+++..+|++.+.+++.|+++|+|++.++..|.+
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~~caSG~~Ai~~A~~ 103 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAAR 103 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeechhHHHHHHHHHHHH
Confidence 667899999999999996 799999999999997653221 22466788899997568999999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCC------------C-------------------C-------------------CC----
Q 015758 190 HIRGGGFRNVLVIGGDALSRFT------------D-------------------W-------------------TD---- 215 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~~------------~-------------------~-------------------~d---- 215 (401)
+|++|.++.+|+++.|.+|... + | ..
T Consensus 104 ~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g 183 (387)
T PRK08947 104 AIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHQRAWAATQEG 183 (387)
T ss_pred HHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999887320 0 0 00
Q ss_pred ----------------------CCc-----------------------------cccccceeEEEEEeeccCC-CCCeeE
Q 015758 216 ----------------------RGS-----------------------------CILFGDAAGAVLVQACDSE-DDGLIS 243 (401)
Q Consensus 216 ----------------------r~~-----------------------------~~lfGDGAaAvll~~~~~~-~~gl~~ 243 (401)
+.. +..++|||+|+||.+.+.. +.+.-.
T Consensus 184 ~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p 263 (387)
T PRK08947 184 RFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKP 263 (387)
T ss_pred CCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceEEEEEccHHHHHHCCCCc
Confidence 000 1134677777777764310 111000
Q ss_pred -EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcC
Q 015758 244 -FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSID 322 (401)
Q Consensus 244 -~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId 322 (401)
..+...+.. +. .+ . .+ + .....+++++|+++|++++|||
T Consensus 264 ~~~I~g~~~~--------------------~~---~~-~-------~~-~--------~~~~~a~~~al~~Agl~~~DId 303 (387)
T PRK08947 264 RARIRSMAVA--------------------GC---DP-S-------IM-G--------YGPVPATQKALKRAGLSISDID 303 (387)
T ss_pred cEEEEEEEEc--------------------Cc---Cc-c-------cc-c--------ccHHHHHHHHHHHcCCCHHHCC
Confidence 011100000 00 00 0 00 0 0113667899999999999999
Q ss_pred EEEecccCHHHHHHHHHHcCC-Cc--hhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeE
Q 015758 323 WLLLHQANQRIIDAVANRLDV-PM--ERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAI 397 (401)
Q Consensus 323 ~~i~Hq~~~~i~~~i~~~lgl-~~--e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~l 397 (401)
++-+|-......-...+.||+ ++ ++++.+ +--+||...|+-...+.+++++-+-+.+.+.+...+|.|....+++
T Consensus 304 ~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~~~~g~G~g~a~~ 383 (387)
T PRK08947 304 VFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQGIATV 383 (387)
T ss_pred EEEecccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEEEeecccceeEEE
Confidence 999999999888889999998 43 455432 3368999888887777777765333455667777777665544455
Q ss_pred EE
Q 015758 398 LR 399 (401)
Q Consensus 398 lr 399 (401)
++
T Consensus 384 ~e 385 (387)
T PRK08947 384 FE 385 (387)
T ss_pred EE
Confidence 43
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-13 Score=137.61 Aligned_cols=249 Identities=19% Similarity=0.145 Sum_probs=170.0
Q ss_pred CCCCHHHHHHHHHHHHHHh-CCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQM-AEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+.++.+|+.+|++++|++ +|++|++||.+++++...... ...+.++....|++...+++.|+++|+|++.++..|.
T Consensus 21 ~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~~Aa 100 (385)
T TIGR02445 21 RNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAA 100 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhhhhHHHHHHHHHHH
Confidence 3668899999999999997 599999999999998753211 2245666667898766899999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC-----C----C----C-----------------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT-----D----W----T----------------------------------------- 214 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~-----~----~----~----------------------------------------- 214 (401)
+.|++|..+.+|+++.|.+|... + + .
T Consensus 101 ~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~ 180 (385)
T TIGR02445 101 RAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHARAHAATQE 180 (385)
T ss_pred HHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999887320 0 0 0
Q ss_pred ----C------------------CC-----------------------------ccccccceeEEEEEeeccCC-CCCee
Q 015758 215 ----D------------------RG-----------------------------SCILFGDAAGAVLVQACDSE-DDGLI 242 (401)
Q Consensus 215 ----d------------------r~-----------------------------~~~lfGDGAaAvll~~~~~~-~~gl~ 242 (401)
+ +. .+..++|||+|+||.+.+.. +.+.-
T Consensus 181 g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~ 260 (385)
T TIGR02445 181 GKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLK 260 (385)
T ss_pred CCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceEEEEEecHHHHHHCCCC
Confidence 0 00 00123566666666653210 11100
Q ss_pred E-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCc
Q 015758 243 S-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSI 321 (401)
Q Consensus 243 ~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dI 321 (401)
. ..+...+. .+. .| . +.+ .....+++++|+++|++++||
T Consensus 261 ~~a~I~g~~~--------------------~~~---~~-~--------~~~--------~~~~~a~~~al~~AGi~p~DI 300 (385)
T TIGR02445 261 PRARIRSMAV--------------------AGC---DP-S--------IMG--------YGPVPATQKALKRAGLSISDI 300 (385)
T ss_pred eeEEEEEEEE--------------------cCC---CC-c--------ccc--------hhHHHHHHHHHHHcCCCHHHc
Confidence 0 00100000 000 00 0 000 012367789999999999999
Q ss_pred CEEEecccCHHHHHHHHHHcCC-Cc--hhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheee
Q 015758 322 DWLLLHQANQRIIDAVANRLDV-PM--ERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSA 396 (401)
Q Consensus 322 d~~i~Hq~~~~i~~~i~~~lgl-~~--e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~ 396 (401)
|++-+|-......-...+.||+ ++ ++++.+ .--+||...|+-...+.++++.-+-+.+.+.+...+|.|..-.++
T Consensus 301 d~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~~~Gl~~~~~g~g~g~a~ 380 (385)
T TIGR02445 301 DVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDATFGLATMCIGLGQGIAT 380 (385)
T ss_pred CEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCeEEEEEecccChhheE
Confidence 9999999998888888999998 43 455433 236799988877776666665422245667788888888888888
Q ss_pred EEEe
Q 015758 397 ILRW 400 (401)
Q Consensus 397 llr~ 400 (401)
++++
T Consensus 381 ~~e~ 384 (385)
T TIGR02445 381 VFER 384 (385)
T ss_pred EEEe
Confidence 8875
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.1e-14 Score=137.08 Aligned_cols=241 Identities=17% Similarity=0.159 Sum_probs=161.0
Q ss_pred CHHHHHHHHHHHHHHhCCC--CcCCCCEEEEEecCCCC----------------------C---Cc--hHHHHHHHcCCC
Q 015758 115 SLTGLAVEAASRALQMAEV--NPEDVDLVLMCTSTPED----------------------L---FG--GATQIPKALGCK 165 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi--~~~~Id~li~~t~~~~~----------------------~---~~--~a~~i~~~lGl~ 165 (401)
....++..|++++++++|+ ++++++.++ +++.+.. . .+ .+.+|+..+|++
T Consensus 3 ~~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~ 81 (342)
T PRK14691 3 RWWRYKWITFHPSLTHADNTEKQERTATII-GAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK 81 (342)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcccEEEEE-ecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC
Confidence 3567899999999999996 556665554 4432210 0 01 267899999994
Q ss_pred CCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-C----------C------------CCCC-CCcccc
Q 015758 166 NNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-F----------T------------DWTD-RGSCIL 221 (401)
Q Consensus 166 ~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-~----------~------------~~~d-r~~~~l 221 (401)
.+.+.+..+|++++.||..|.++|+.|+.+.+||.++|.... . + ++-| +...++
T Consensus 82 --Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v 159 (342)
T PRK14691 82 --GPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFV 159 (342)
T ss_pred --CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCCcc
Confidence 899999999999999999999999999999999999997321 0 1 1111 224678
Q ss_pred ccceeEEEEEeeccC-CCCC--e----eEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHH
Q 015758 222 FGDAAGAVLVQACDS-EDDG--L----ISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKE 294 (401)
Q Consensus 222 fGDGAaAvll~~~~~-~~~g--l----~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~ 294 (401)
+||||+++||++.+. .+.| + .++...+++. ++ ..| . .++
T Consensus 160 ~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~---~~--------------------~~p-~--------p~~-- 205 (342)
T PRK14691 160 MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAY---HM--------------------TSG-A--------EDG-- 205 (342)
T ss_pred ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCC---CC--------------------CCC-C--------CCH--
Confidence 999999999997542 1222 2 1221111110 00 001 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhh--hhcccccCccccChHHHHH
Q 015758 295 VFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERV--ISNLANYGNTSAASIPLAL 367 (401)
Q Consensus 295 v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~--~~~l~~~Gn~~sasi~~~L 367 (401)
....++++++|+++|++++|||++..|..+....|. +.+.+|-. ..+ ..+...+||+.+|+-.+.+
T Consensus 206 ------~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~ 278 (342)
T PRK14691 206 ------DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLET 278 (342)
T ss_pred ------HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHH
Confidence 344578999999999999999999999988766554 55566632 122 2466799998766644333
Q ss_pred HH---HHHcCCCC-------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 368 DE---AVRSGKVK-------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 368 ~~---~l~~g~~~-------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
.. .++++.+. +-.++|..+||.|.+.++++|+
T Consensus 279 ~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~ 338 (342)
T PRK14691 279 IFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLK 338 (342)
T ss_pred HHHHHHHhCCccCCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEe
Confidence 22 23333211 1256789999999999999986
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-13 Score=137.20 Aligned_cols=248 Identities=19% Similarity=0.168 Sum_probs=167.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-c-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-G-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
+.+..+|+.+|++++|+++|+++++||.+++++....... + .+..+....|++...+.+.++++|++++.++..|.+.
T Consensus 23 ~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~~acaSg~~Av~~Aa~~ 102 (382)
T PRK07801 23 GVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQA 102 (382)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeecchhhhHHHHHHHHHHH
Confidence 3688999999999999999999999999998864211111 1 2333334577754578889999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC------------------C---CCCCC--------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFT------------------D---WTDRG-------------------------------- 217 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~------------------~---~~dr~-------------------------------- 217 (401)
|++|.++.|||++.|.++... . |.++.
T Consensus 103 I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~ 182 (382)
T PRK07801 103 VMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALES 182 (382)
T ss_pred HHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 999999999999998553210 0 10000
Q ss_pred ---------c-------------------------------------------cccccceeEEEEEeeccCC-CCCe-eE
Q 015758 218 ---------S-------------------------------------------CILFGDAAGAVLVQACDSE-DDGL-IS 243 (401)
Q Consensus 218 ---------~-------------------------------------------~~lfGDGAaAvll~~~~~~-~~gl-~~ 243 (401)
. +...+|||+|+||.+.+.. +.+. ..
T Consensus 183 ~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~ 262 (382)
T PRK07801 183 HRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPR 262 (382)
T ss_pred HHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCcc
Confidence 0 0012477777777754310 0010 00
Q ss_pred EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCE
Q 015758 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDW 323 (401)
Q Consensus 244 ~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~ 323 (401)
..+...+ ..... .. +......++++++++++|++++|||.
T Consensus 263 ~~i~~~~-------------------------------------~~~~~-~~--~~~~~~~~a~~~a~~~agi~~~did~ 302 (382)
T PRK07801 263 ARIHHLS-------------------------------------VRGDD-PV--FMLTAPIPATRYALEKTGLSIDDIDV 302 (382)
T ss_pred EEEEEEE-------------------------------------EecCC-hH--hhccChHHHHHHHHHHcCCCHHHcCE
Confidence 0000000 00000 00 00011136789999999999999999
Q ss_pred EEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 324 LLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 324 ~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+-+|-......-...+.||+.+++++.+ .--+||...|+-...+.+++++-+-+.+.+.+...+|.|.+..+++++.
T Consensus 303 ~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 303 VEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred eeecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccceeEEEEEe
Confidence 9999999888888899999998887643 3378999999998888888775332345566777787777777777763
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-12 Score=130.64 Aligned_cols=244 Identities=19% Similarity=0.161 Sum_probs=161.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCc-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFG-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
+.+..+|+.+|++++|+++|++++|||.+++++...+.... ....+++.+|++ ..+.+.|+++|++++.++..|...|
T Consensus 24 ~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~~~c~sg~~ai~~A~~~I 102 (398)
T PRK06157 24 DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVENFCATGSEAFRGAVYAV 102 (398)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEecccHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999988764432111 246788899996 5788899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC--C---C------CCC------------------------------C---------------
Q 015758 192 RGGGFRNVLVIGGDALSR--F---T------DWT------------------------------D--------------- 215 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~--~---~------~~~------------------------------d--------------- 215 (401)
++|.++.+|++++|.++. + . .+. |
T Consensus 103 ~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~ 182 (398)
T PRK06157 103 ASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGA 182 (398)
T ss_pred HCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHHHHcccccHHHHHHHHHHh
Confidence 999999999999998753 0 0 000 0
Q ss_pred --C-----C--------------------ccccccceeEEEEEeeccC-CCCCe-eEEEEeecCCCCCceeeeccCCCcc
Q 015758 216 --R-----G--------------------SCILFGDAAGAVLVQACDS-EDDGL-ISFDVHSDGEGGRHLNACIKGNQTN 266 (401)
Q Consensus 216 --r-----~--------------------~~~lfGDGAaAvll~~~~~-~~~gl-~~~~~~s~g~~~~~l~~~~~~~~~~ 266 (401)
+ . .+...+|||+|+||.+++. ++-+. -...+..-+.....
T Consensus 183 ~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~----------- 251 (398)
T PRK06157 183 RNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSN----------- 251 (398)
T ss_pred cCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEeccc-----------
Confidence 0 0 0123589999999987541 11110 01111110000000
Q ss_pred cccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCC--cCCcCEEEecccCHHHHHHHHHHcCCC
Q 015758 267 DALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLT--MSSIDWLLLHQANQRIIDAVANRLDVP 344 (401)
Q Consensus 267 ~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~--~~dId~~i~Hq~~~~i~~~i~~~lgl~ 344 (401)
+.....+.... ..| .....+.+++++++|++ ++|||.+-+|-......-...+.||+.
T Consensus 252 ------~~~~~~~~~~~----~~~----------~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~~~l~~~e~lGl~ 311 (398)
T PRK06157 252 ------GWELQYNGWDG----SYF----------PTTRIAARKAYREAGITDPREELSMAEVHDCFSITELVTMEDLGLS 311 (398)
T ss_pred ------ccccccccccc----ccc----------HHHHHHHHHHHHHcCCCCchhcCCEEEEecCChHHHHHHHHHcCCC
Confidence 00000000000 000 11236788999999998 799999999999988888888999987
Q ss_pred ch------------------hhhhc--ccccCccccChHHHHHHHHHHcCC-------CCCCCEEEEEeee
Q 015758 345 ME------------------RVISN--LANYGNTSAASIPLALDEAVRSGK-------VKPGHTIAAAGFG 388 (401)
Q Consensus 345 ~e------------------~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~-------~~~Gd~ill~~~G 388 (401)
+. +++.+ .--+||...++-...+.+++++-+ ++.-++.+..+.|
T Consensus 312 ~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~rQv~~a~~~l~~~~g 382 (398)
T PRK06157 312 ERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRAGERQLKNPRLALTHNLG 382 (398)
T ss_pred CCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcccccCccCCCccEEEEeccC
Confidence 62 22222 226899998888888888877522 3233445555555
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-12 Score=131.41 Aligned_cols=239 Identities=17% Similarity=0.114 Sum_probs=154.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-Cc-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FG-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
+.+..+|+.+|+++||+++|++++|||.+++++...... .. ....++..+|++ ..+++.+..+|+++..++..|.+.
T Consensus 34 ~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~~~~aSg~~ai~~A~~~ 112 (430)
T PRK06365 34 YMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIEGGGATGGLAFQAGYEE 112 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEeCCcHHHHHHHHHHHHH
Confidence 456789999999999999999999999988765322111 11 234568999996 588999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC--------------CCCCC----------------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFT--------------DWTDR---------------------------------------- 216 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~--------------~~~dr---------------------------------------- 216 (401)
|++|.++.|||+++|.++... .|...
T Consensus 113 I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~ 192 (430)
T PRK06365 113 IASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIH 192 (430)
T ss_pred HHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999765310 01000
Q ss_pred C---------------------------ccccccceeEEEEEeeccCC-CCC---e--eEEEEeecCCCCCceeeeccCC
Q 015758 217 G---------------------------SCILFGDAAGAVLVQACDSE-DDG---L--ISFDVHSDGEGGRHLNACIKGN 263 (401)
Q Consensus 217 ~---------------------------~~~lfGDGAaAvll~~~~~~-~~g---l--~~~~~~s~g~~~~~l~~~~~~~ 263 (401)
+ .+..++|||+|+||.+++.. +-+ + ......+.+. .. .
T Consensus 193 NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv~i~g~g~~~~~~---~~------~ 263 (430)
T PRK06365 193 NPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPVLIKAIGTGSDTL---RL------A 263 (430)
T ss_pred CcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCCeEEEEEEEecccc---cc------c
Confidence 0 01246899999999976421 111 1 1111111110 00 0
Q ss_pred CcccccCCCCcc----cccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCC--cCCcCEEEecccCHHHHHHH
Q 015758 264 QTNDALGSNGSV----LAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLT--MSSIDWLLLHQANQRIIDAV 337 (401)
Q Consensus 264 ~~~~~~~~~G~~----~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~--~~dId~~i~Hq~~~~i~~~i 337 (401)
+ ...+.+ .+.+...+.+ ...+ .. .......+.+++++++|++ ++|||.+-+|-......-..
T Consensus 264 ~-----~~~~~~~~~~~~~~~~~~~~---~~~~--~~--~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~ 331 (430)
T PRK06365 264 D-----RPFGEVPLLPNESPDDYKDL---RYPG--VH--SFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQT 331 (430)
T ss_pred c-----cccccccccccccccccccc---cccc--cc--ccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHH
Confidence 0 000000 0000000000 0000 00 0123457889999999998 89999999999988777788
Q ss_pred HHHcCCCch------------------hhhhc--ccccCccccChHHHHHHHHHHc
Q 015758 338 ANRLDVPME------------------RVISN--LANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 338 ~~~lgl~~e------------------~~~~~--l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
.+.||+.+. +++.+ +--+||...++-...+.+++.+
T Consensus 332 lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~Q 387 (430)
T PRK06365 332 YEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQ 387 (430)
T ss_pred HHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHH
Confidence 899998762 22222 2268999999988888888773
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.3e-13 Score=125.07 Aligned_cols=284 Identities=22% Similarity=0.222 Sum_probs=174.8
Q ss_pred hcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChH
Q 015758 101 RTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSG 179 (401)
Q Consensus 101 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~ 179 (401)
+|-|...+-.....+..+|+..|++.+|++++++++|++-+|+++..+-..- .++.+.+---|++...++.+++.-|++
T Consensus 15 RTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNkvCaS 94 (396)
T KOG1390|consen 15 RTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVNKVCAS 94 (396)
T ss_pred cccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeehhhhhh
Confidence 5555555554456789999999999999999999999999999987654332 468888888899888999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCC-C-------------C------------C---C-----c-------
Q 015758 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDW-T-------------D------------R---G-----S------- 218 (401)
Q Consensus 180 ~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~-~-------------d------------r---~-----~------- 218 (401)
++.++.+|++.|+.|..+.++..+.|.+|....+ . | . + +
T Consensus 95 gmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~a~~~~It 174 (396)
T KOG1390|consen 95 GMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKKYQIT 174 (396)
T ss_pred hHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhccCCcchhHhhhHHHhCCc
Confidence 9999999999999999999999999999843200 0 0 0 0 0
Q ss_pred --------------------cccccceeEE---------EEEeeccCCCCC-------eeEEEEeecCCCCCceeeeccC
Q 015758 219 --------------------CILFGDAAGA---------VLVQACDSEDDG-------LISFDVHSDGEGGRHLNACIKG 262 (401)
Q Consensus 219 --------------------~~lfGDGAaA---------vll~~~~~~~~g-------l~~~~~~s~g~~~~~l~~~~~~ 262 (401)
.-.|+.=-.. +++..++.-..+ .+...+..+|. .++. .+
T Consensus 175 Re~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~gg---TVTa--aN 249 (396)
T KOG1390|consen 175 REEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGG---TVTA--AN 249 (396)
T ss_pred HhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceeecCCC---eecc--cc
Confidence 0123333333 333332211111 11111111221 1111 11
Q ss_pred CCcccccCCCCcccccCCCCC-CcccEEEc---------h--HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccC
Q 015758 263 NQTNDALGSNGSVLAFPPQHY-SYSSIYMN---------G--KEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQAN 330 (401)
Q Consensus 263 ~~~~~~~~~~G~~~~~p~~~~-~~~~~~m~---------g--~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~ 330 (401)
.. .+.++...+-+-..+. ...-+... + ...|.. .-..+|.++|+++|+..+|||+|-+..+.
T Consensus 250 AS---~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~i---aP~laipk~lk~aG~~~sdVd~~EiNEAF 323 (396)
T KOG1390|consen 250 AS---TLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTI---APALAIPKALKKAGLEQSDVDYWEINEAF 323 (396)
T ss_pred cc---ccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhccc---chHHHHHHHHHHcCcchhhhhHHhhhhhh
Confidence 10 1111111110000000 00000000 0 001110 11257788999999999999999999999
Q ss_pred HHHHHHHHHHcCCCchhhhhcc--cccCcc---ccChHHHHHHHHHHcCCCCCCCEEEEE-eeehhhhheeeEEE
Q 015758 331 QRIIDAVANRLDVPMERVISNL--ANYGNT---SAASIPLALDEAVRSGKVKPGHTIAAA-GFGAGLTWGSAILR 399 (401)
Q Consensus 331 ~~i~~~i~~~lgl~~e~~~~~l--~~~Gn~---~sasi~~~L~~~l~~g~~~~Gd~ill~-~~G~G~s~~a~llr 399 (401)
.-..-...+.||++++++..+- -..||. +.+.+...|.+.+++ +.|++.+.. --|.|.. .+++++
T Consensus 324 s~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGGga-sa~vie 394 (396)
T KOG1390|consen 324 SVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGGGA-SAMVIE 394 (396)
T ss_pred hHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh---hCCceeEEEEecCCCce-eeEEEe
Confidence 9999999999999999997543 267886 666788888888875 234443332 2343333 455554
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-11 Score=123.72 Aligned_cols=98 Identities=17% Similarity=0.116 Sum_probs=82.8
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+.+..+|+.+|++++|+++|+++++||.+++++..+... +..+..+.-..|++...+++.|+++|++++.++..|.++
T Consensus 27 ~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~~CaSG~~ai~~A~~~ 106 (427)
T PRK09268 27 ADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQACGTGLEAAILVANK 106 (427)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeeechhhHHHHHHHHHHHH
Confidence 3568899999999999999999999999999998654211 224556555566654589999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 015758 191 IRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~ 209 (401)
|++|.++.+|+++.|.+|+
T Consensus 107 I~sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 107 IALGQIDSGIAGGVDTTSD 125 (427)
T ss_pred HHCCCCCEEEEeeEEccCC
Confidence 9999999999999998773
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-11 Score=123.68 Aligned_cols=238 Identities=18% Similarity=0.138 Sum_probs=156.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
+.+..+|+.+|+++||+++||+++|||.++..+..+. . ....++..||++ ..+...+..+|+++..++..|...|+
T Consensus 22 ~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~--~-~~~~~~~~lGl~-~~~~~~v~~gg~s~~~a~~~A~~~I~ 97 (388)
T PRK08142 22 DKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPG--L-GPASMVDYLGLK-LRHVDSTETGGSSYLAHVGHAAQAIA 97 (388)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCC--c-cHHHHHHhCCCC-CeeeccccCCcHHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999775322211 1 124589999994 46777888999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCC-------------C---CCC------------------------------------------
Q 015758 193 GGGFRNVLVIGGDALSRF-------------T---DWT------------------------------------------ 214 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~~-------------~---~~~------------------------------------------ 214 (401)
+|.++.|||++.|+.+.. . +|.
T Consensus 98 sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~ 177 (388)
T PRK08142 98 AGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQH 177 (388)
T ss_pred cCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhcc
Confidence 999999999999974310 0 011
Q ss_pred CCC-------------------------ccccccceeEEEEEeeccCC-CCCeeEEEEeecCCCCCceeeeccCCCcccc
Q 015758 215 DRG-------------------------SCILFGDAAGAVLVQACDSE-DDGLISFDVHSDGEGGRHLNACIKGNQTNDA 268 (401)
Q Consensus 215 dr~-------------------------~~~lfGDGAaAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~ 268 (401)
++. .+...+|||+|+||.+.+.. +.+.....+..-+...+..
T Consensus 178 NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~v~I~g~~~~~~~~------------ 245 (388)
T PRK08142 178 NPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVLGAGEAIKGQ------------ 245 (388)
T ss_pred CChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCCCCEEEEEEEEecCCc------------
Confidence 000 01356999999999976421 1110001111111000000
Q ss_pred cCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch--
Q 015758 269 LGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME-- 346 (401)
Q Consensus 269 ~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e-- 346 (401)
. .. ... + . ......+++++++++|++++|||.+-+|-......-...+.||+.+.
T Consensus 246 ~--------~~--~~~---~------~----~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~~~~~~E~lGl~~~Ge 302 (388)
T PRK08142 246 M--------GG--KVD---L------T----YSGAAWSGPAAFAEAGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGE 302 (388)
T ss_pred c--------cc--Ccc---c------c----cHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHHHHHHHHHcCCCCCCc
Confidence 0 00 000 0 0 01224788899999999999999999999988887778899998542
Q ss_pred ---------------hhhhc----ccccCccccChHHHHHHHHHHcCCCCC--------CCEEEEEeeeh
Q 015758 347 ---------------RVISN----LANYGNTSAASIPLALDEAVRSGKVKP--------GHTIAAAGFGA 389 (401)
Q Consensus 347 ---------------~~~~~----l~~~Gn~~sasi~~~L~~~l~~g~~~~--------Gd~ill~~~G~ 389 (401)
+++.| +.-.||...++-...+.|+.++-+=+. -++.|..++|.
T Consensus 303 ~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~~rQV~~a~~gl~~~~Gg 372 (388)
T PRK08142 303 GGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPAVQVPNCDLALAHGTGG 372 (388)
T ss_pred hHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCCCCCCCCCcEEEEeCCCC
Confidence 12212 124689998888888888877522122 25566666664
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-11 Score=124.16 Aligned_cols=97 Identities=21% Similarity=0.147 Sum_probs=81.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCC--CCEEEEEecCCCCC---CchHHHHHHHcCCC------CCCeeEeeCccChHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPED--VDLVLMCTSTPEDL---FGGATQIPKALGCK------NNPLAYDITAACSGF 180 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~--Id~li~~t~~~~~~---~~~a~~i~~~lGl~------~~~~~~~i~~~C~~~ 180 (401)
.+.+..+|+.+|++++|+++|++++| ||.+++++..+... ...+..++..+|++ ...+++.|+.+|+|+
T Consensus 44 ~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG 123 (438)
T PTZ00455 44 ENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASG 123 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHH
Confidence 35688999999999999999999999 99999987643321 12356667565554 468899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCC
Q 015758 181 LLGLVSAACHIRGGGFRNVLVIGGDALS 208 (401)
Q Consensus 181 ~~aL~~A~~~l~~g~~~~vLvv~~d~~s 208 (401)
+.++..|.++|++|.++.|||+++|.++
T Consensus 124 ~~Ai~~A~~~I~sG~~dvvlv~G~E~ms 151 (438)
T PTZ00455 124 GLAVQSAWEALLAGTSDIALVVGVEVQT 151 (438)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEeecc
Confidence 9999999999999999999999999765
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.2e-12 Score=125.96 Aligned_cols=244 Identities=24% Similarity=0.299 Sum_probs=161.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCCc-CCCC---EEEEEecCCC-----------------C-----C-----C-chHHHHHHH
Q 015758 114 ESLTGLAVEAASRALQMAEVNP-EDVD---LVLMCTSTPE-----------------D-----L-----F-GGATQIPKA 161 (401)
Q Consensus 114 e~~~~la~~Aa~~aL~~agi~~-~~Id---~li~~t~~~~-----------------~-----~-----~-~~a~~i~~~ 161 (401)
+....++..|+++|++++|++. .+.+ .++.++..+. . . . ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 3678999999999999999983 3343 2334444321 0 0 1 126788999
Q ss_pred cCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEecc-CC--------------CC-------CCCCCC-Cc
Q 015758 162 LGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDA-LS--------------RF-------TDWTDR-GS 218 (401)
Q Consensus 162 lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~-~s--------------~~-------~~~~dr-~~ 218 (401)
+|++ .+.+.+..+|+++.+++..|.++|+.|..+.+++.++|. .+ .. -++.|+ ..
T Consensus 149 ~g~~--G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~Rd 226 (412)
T COG0304 149 FGLK--GPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRD 226 (412)
T ss_pred hCCC--CCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCC
Confidence 9994 789999999999999999999999999999999999977 22 10 111122 34
Q ss_pred cccccceeEEEEEeeccCC-CCC--ee----EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEc
Q 015758 219 CILFGDAAGAVLVQACDSE-DDG--LI----SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMN 291 (401)
Q Consensus 219 ~~lfGDGAaAvll~~~~~~-~~g--l~----~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~ 291 (401)
.+++|+|++++|||.-+.. ..| ++ ++...+|+ .|.. -|.. +
T Consensus 227 Gfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da---~h~t--------------------~P~p---------~ 274 (412)
T COG0304 227 GFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDA---YHIT--------------------APAP---------D 274 (412)
T ss_pred CEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccc---cccC--------------------CCCC---------C
Confidence 6899999999999986521 122 32 22222222 1211 1110 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchh--hhhcccccCccccChHH
Q 015758 292 GKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMER--VISNLANYGNTSAASIP 364 (401)
Q Consensus 292 g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~--~~~~l~~~Gn~~sasi~ 364 (401)
| ....++++.+|+++|++++||||+..|..+....|. +.+.++--..+ +.++...+||+-.|+-.
T Consensus 275 g--------~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGa 346 (412)
T COG0304 275 G--------EGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGA 346 (412)
T ss_pred C--------chHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHH
Confidence 1 223488999999999999999999999998876664 44455633333 23567789999665544
Q ss_pred HHHHH---HHHcCCC-------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 365 LALDE---AVRSGKV-------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 365 ~~L~~---~l~~g~~-------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
+-+.- .++++.+ +..+.+|.-+||-|.+-++++++
T Consensus 347 veai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~ 409 (412)
T COG0304 347 VEAIISLLALRDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFK 409 (412)
T ss_pred HHHHHHHHHHhcCCcCCCCCcCCCCcccccccccCCcccccceeEEEecccccCCcceEEEEe
Confidence 32221 2222211 11355678899999999998886
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-11 Score=126.31 Aligned_cols=245 Identities=19% Similarity=0.148 Sum_probs=165.7
Q ss_pred CHHHHHHHHHHHHHHhCCCC--cCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 115 SLTGLAVEAASRALQMAEVN--PEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~--~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
+..+|+.+|+++||+++|++ +++||.+++++............++.+||+. ..+......||++...++..|+..|+
T Consensus 26 s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~-p~~~~~~~~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 26 EPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGAD-PARTVYSPVGGNSPQRLVNEAALRIA 104 (498)
T ss_pred CHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCC-CcceeEecCCCHHHHHHHHHHHHHHH
Confidence 78999999999999999999 9999999987653222222457899999995 35555666889999999999999999
Q ss_pred cCCCCeEEEEEeccCCCC---------------------------C----CCC---------------------------
Q 015758 193 GGGFRNVLVIGGDALSRF---------------------------T----DWT--------------------------- 214 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~~---------------------------~----~~~--------------------------- 214 (401)
+|.++.|||+++|.++.. . +|.
T Consensus 105 sG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t~ 184 (498)
T PRK08257 105 AGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRSP 184 (498)
T ss_pred CCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcCH
Confidence 999999999999975411 0 000
Q ss_pred --------------------CC------------------Cc-----------cc-cccceeEEEEEeeccCC-CCCe--
Q 015758 215 --------------------DR------------------GS-----------CI-LFGDAAGAVLVQACDSE-DDGL-- 241 (401)
Q Consensus 215 --------------------dr------------------~~-----------~~-lfGDGAaAvll~~~~~~-~~gl-- 241 (401)
++ .+ +. ...|||+|+||.+.+.. +-++
T Consensus 185 e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~ 264 (498)
T PRK08257 185 EEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPE 264 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCC
Confidence 00 00 01 26899999999875421 1110
Q ss_pred -eEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCC
Q 015758 242 -ISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSS 320 (401)
Q Consensus 242 -~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~d 320 (401)
....+...+...+.. .+... .. +.. ......+.+++++++|++++|
T Consensus 265 ~~~V~i~g~a~~~~~~--------------------~~~~r-~~----------~~~--~~~~~~aa~~a~~~AGi~~~D 311 (498)
T PRK08257 265 DRWVYLHGGADAHDPY--------------------DILER-PD----------LHR--SPAIRAAGRRALALAGLGIDD 311 (498)
T ss_pred CceEEEEEEEEeeCcc--------------------ccccc-cc----------ccc--ChHHHHHHHHHHHHhCCCHHH
Confidence 001111101000000 00000 00 000 123346888999999999999
Q ss_pred cCEEEecccCHHHHHHHHHHcCCCch-hhhhc----ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhh
Q 015758 321 IDWLLLHQANQRIIDAVANRLDVPME-RVISN----LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTW 393 (401)
Q Consensus 321 Id~~i~Hq~~~~i~~~i~~~lgl~~e-~~~~~----l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~ 393 (401)
||.+-+|-..........+.|||.++ +...| +.-+||.+.++-...+.++.++-+-+++.+.|+.+.|.-++.
T Consensus 312 id~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~GG~~~~ 389 (498)
T PRK08257 312 IDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTANGGYLTK 389 (498)
T ss_pred CCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECCCChhhc
Confidence 99999999998888889999999876 22222 346899999998888888887644346788888887754443
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-11 Score=120.32 Aligned_cols=223 Identities=20% Similarity=0.139 Sum_probs=146.3
Q ss_pred CCCHHHHHHHHHHHHHHhCC-CCc-CCCCEEEEEecC-CCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAE-VNP-EDVDLVLMCTST-PEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~ag-i~~-~~Id~li~~t~~-~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
+.+..+|+.+|+++||+++| +++ +|||.+++++.. .+...-....++..+|+. ..+.+.+ |+++..++..|..
T Consensus 22 ~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v---~~sg~~a~~~A~~ 97 (385)
T PRK06066 22 EVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV---AGDGLQGLAHAVM 97 (385)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE---eCcHHHHHHHHHH
Confidence 56889999999999999999 997 799999875421 110111234577889984 3455555 8899999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCC------------CCC-------------------------------------------
Q 015758 190 HIRGGGFRNVLVIGGDALSRFT------------DWT------------------------------------------- 214 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~~------------~~~------------------------------------------- 214 (401)
.|++|.++.|||++.|+++... +|.
T Consensus 98 aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~ 177 (385)
T PRK06066 98 HINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLS 177 (385)
T ss_pred HHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999999998654200 010
Q ss_pred CC-------------------------CccccccceeEEEEEeeccCC-CCCeeEEEEeecCCCCCceeeeccCCCcccc
Q 015758 215 DR-------------------------GSCILFGDAAGAVLVQACDSE-DDGLISFDVHSDGEGGRHLNACIKGNQTNDA 268 (401)
Q Consensus 215 dr-------------------------~~~~lfGDGAaAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~ 268 (401)
++ ..+...+|||+|+||.+++.. +.+.-...+...+...++.
T Consensus 178 NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv~I~g~g~~~~~~------------ 245 (385)
T PRK06066 178 NPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPVWIKGIGWSTESS------------ 245 (385)
T ss_pred CChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCCc------------
Confidence 00 012457899999999975421 1110011111111000000
Q ss_pred cCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCC--cCCcCEEEecccCHHHHHHHHHHcCCCc-
Q 015758 269 LGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLT--MSSIDWLLLHQANQRIIDAVANRLDVPM- 345 (401)
Q Consensus 269 ~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~--~~dId~~i~Hq~~~~i~~~i~~~lgl~~- 345 (401)
+ ..+. . + .. ......+.+++++++|++ ++|||.+-+|-......-...+.||+.+
T Consensus 246 ----~----~~~~--~-----~-----~~--~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~~l~~~e~lG~~~~ 303 (385)
T PRK06066 246 ----N----LETA--E-----L-----GK--ANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYKELQHIEALRLSEE 303 (385)
T ss_pred ----c----cccc--c-----c-----cc--cHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHHHHHHHHHcCCCCC
Confidence 0 0000 0 0 00 122336889999999998 7999999999998888888889999876
Q ss_pred -hh--------------hhhc----ccccCccccChHHHHHHHHHHc
Q 015758 346 -ER--------------VISN----LANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 346 -e~--------------~~~~----l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
|. ++-| +--+||...++-...+.++.++
T Consensus 304 Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~Q 350 (385)
T PRK06066 304 PEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEY 350 (385)
T ss_pred CchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHH
Confidence 32 1212 1257999999888888888775
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-10 Score=116.63 Aligned_cols=88 Identities=24% Similarity=0.165 Sum_probs=73.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
+.+..+|+.+|+++||+++||+++|||.+++.+. . ..+ ...+++.||+++..+...+..+|+++..+|..|...|+
T Consensus 21 ~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~-~~~-~~~l~~~lGl~~~~~~~~v~~gg~sg~~~~~~A~~~I~ 96 (386)
T PRK07855 21 GRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM--D-TNP-EIAVARALGIGELKFFSRIHYGGGAACATVQQAAMAVA 96 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--c-ccc-HHHHHHHCCCCCCcceeeecCCcHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999986432 1 111 25688999995324556788999999999999999999
Q ss_pred cCCCCeEEEEEe
Q 015758 193 GGGFRNVLVIGG 204 (401)
Q Consensus 193 ~g~~~~vLvv~~ 204 (401)
+|.++.|||++.
T Consensus 97 sG~~d~vLv~g~ 108 (386)
T PRK07855 97 TGVADVVVCYRA 108 (386)
T ss_pred CCCCCEEEEEee
Confidence 999999999987
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.2e-11 Score=115.49 Aligned_cols=100 Identities=31% Similarity=0.295 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 111 SGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 111 ~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
..+.+..+|+.++++++|++++++|++||.|++++..+.... ..+.+++...|++.+.+++.|+++|+|++.|+.+|..
T Consensus 21 l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~~CaSG~~Av~~a~~ 100 (264)
T PF00108_consen 21 LADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVNRACASGLQAVHLAAM 100 (264)
T ss_dssp TTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE-GGGHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeehhhhhHHHHHHHHhhh
Confidence 357789999999999999999999999999999998775543 3577888889998788999999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCC
Q 015758 190 HIRGGGFRNVLVIGGDALSRF 210 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~ 210 (401)
.|++|.++.+|++|+|.+|+.
T Consensus 101 ~I~sG~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 101 AIASGEADVVLAGGVESMSRV 121 (264)
T ss_dssp HHHTTS-SEEEEEEEEETTTS
T ss_pred hhcCCCccEEEEecccccccc
Confidence 999999999999999999864
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.2e-10 Score=103.81 Aligned_cols=273 Identities=18% Similarity=0.238 Sum_probs=150.9
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCC--chhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEE
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDT--SDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVL 142 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~--~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li 142 (401)
..+++|++.++.+-+.. -+--|.+.|+. .|.++ | +..| +.....|..+|++.+|+++++.++|||+++
T Consensus 8 ~~~p~I~~~asvvGpkE-g~GPL~~~FD~~~~D~~~----G--e~sw---EkAE~~m~~~A~~~al~Ka~l~~~dId~~~ 77 (329)
T PF07451_consen 8 ENPPYIISTASVVGPKE-GEGPLGDYFDKIYEDDYF----G--EKSW---EKAESKMQKEAVELALKKAGLKKEDIDYLF 77 (329)
T ss_dssp ECEEEEEEEEEEE-HHH-HCSTTGGGSSEE-SSTTT----T--SSSH---HHHHHHHHHHHHHHHHHHTT--GGG-SEEE
T ss_pred CCCCEEEEEEEEECCcc-ccCCChhhCCcccccccc----C--cccH---HHHHHHHHHHHHHHHHHHcCCCHHHCeEEE
Confidence 45688999998885543 11222333321 11111 1 1112 223578899999999999999999999999
Q ss_pred EEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC---CCCCCC-----
Q 015758 143 MCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS---RFTDWT----- 214 (401)
Q Consensus 143 ~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s---~~~~~~----- 214 (401)
-+--.-. .-.+++.++.|++ |.+.+-.+|+++..+|.+|+.++..|-.++||+.++-.+. +-+++.
T Consensus 78 aGDLlnQ--~i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P~EyG~ 151 (329)
T PF07451_consen 78 AGDLLNQ--IISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFPTEYGG 151 (329)
T ss_dssp EEETTCC--CCHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT---GGGT-
T ss_pred ehhhhhh--hHHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCchhccC
Confidence 7522111 1257899999998 4788999999999999999999999999999999887765 212221
Q ss_pred C-CCccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchH
Q 015758 215 D-RGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGK 293 (401)
Q Consensus 215 d-r~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~ 293 (401)
. +.+...---||+|+||++.. .+. .+.-.+.| ..+|+-.++. ++| |.
T Consensus 152 Qrp~tAqwTVTGaGa~il~~~~---~~p-~It~~T~G-----------------------kVvD~G~~D~----~nM-Ga 199 (329)
T PF07451_consen 152 QRPPTAQWTVTGAGAAILSKEG---SGP-RITHATIG-----------------------KVVDMGIKDP----NNM-GA 199 (329)
T ss_dssp ---TT--EE--EEEEEEEESS-----SE-EEEEEE---------------------------B-SS---T----T-H-HH
T ss_pred CCCCcccEEEeceEEEEEecCC---CCc-EEEEEEEE-----------------------EEEEcCCCCc----ccc-hh
Confidence 1 12333445699999999753 222 12222222 2222211111 122 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecc---cCHHHHHHHHHHcCCCchhhhh-----cc----c--ccCccc
Q 015758 294 EVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQ---ANQRIIDAVANRLDVPMERVIS-----NL----A--NYGNTS 359 (401)
Q Consensus 294 ~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq---~~~~i~~~i~~~lgl~~e~~~~-----~l----~--~~Gn~~ 359 (401)
.......+.|.+.|++.|.+++|.|.++.-- .+..++..+.++-|++.++.+. .+ + .-|-.|
T Consensus 200 ----AMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSG 275 (329)
T PF07451_consen 200 ----AMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSG 275 (329)
T ss_dssp ----HHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EES
T ss_pred ----hHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCC
Confidence 1224455788899999999999999999755 4578889999999998876531 01 1 124444
Q ss_pred cChHHHHHH----HHHHcCCCCCCCEEEEEeeehhhh
Q 015758 360 AASIPLALD----EAVRSGKVKPGHTIAAAGFGAGLT 392 (401)
Q Consensus 360 sasi~~~L~----~~l~~g~~~~Gd~ill~~~G~G~s 392 (401)
|+.....+. ..+++|++ .+||+++.|+=+|
T Consensus 276 cgCSA~V~~g~ll~~l~~g~~---krvL~vaTGALlS 309 (329)
T PF07451_consen 276 CGCSAVVLCGYLLPKLRKGEL---KRVLFVATGALLS 309 (329)
T ss_dssp HHHHHHHHHHCHHHHHHTTS----SEEEEEEEEE---
T ss_pred cchHHHHHHHHHHHHHHcCCc---eEEEEEEchhhcC
Confidence 444443332 23344554 4799999997544
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.4e-11 Score=112.83 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=160.8
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCc--------hh--hhh-hhcCccee-----EecCCC----CCHHHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTS--------DE--WIS-VRTGIRNR-----RVLSGK----ESLTGLAVEAAS 125 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~--------~~--~i~-~~~Gi~~R-----~~~~~~----e~~~~la~~Aa~ 125 (401)
+.|.|.|+|...|=..-.+..+.+++... ++ .+. ..-|--.| ++...+ .+...+++.|++
T Consensus 24 rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa~ 103 (440)
T KOG1394|consen 24 RRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAAE 103 (440)
T ss_pred eeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHHH
Confidence 34789999999998875555555554211 00 010 00011111 011111 246789999999
Q ss_pred HHHHhCCCCcC---CCC----EEEEEecCCC---------------------CCCc------hHHHHHHHcCCCCCCeeE
Q 015758 126 RALQMAEVNPE---DVD----LVLMCTSTPE---------------------DLFG------GATQIPKALGCKNNPLAY 171 (401)
Q Consensus 126 ~aL~~agi~~~---~Id----~li~~t~~~~---------------------~~~~------~a~~i~~~lGl~~~~~~~ 171 (401)
+||+++++.+. +.| .+.+++..++ +..| .+.+|+.++|+. .+..
T Consensus 104 eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~--Gpnh 181 (440)
T KOG1394|consen 104 EALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLR--GPNH 181 (440)
T ss_pred HHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCc--CCch
Confidence 99999998765 222 3444554321 1112 278999999994 7899
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC------C----------CC------CC-CCccccccceeEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF------T----------DW------TD-RGSCILFGDAAGA 228 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~------~----------~~------~d-r~~~~lfGDGAaA 228 (401)
.++++|+++.+++-.|.++|+.|..+..|..++|.+-.- . ++ -| ....+++|+|++.
T Consensus 182 svSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagv 261 (440)
T KOG1394|consen 182 SVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGV 261 (440)
T ss_pred hhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeeccceeE
Confidence 999999999999999999999999999999999975321 1 11 11 1245899999999
Q ss_pred EEEeeccCC-CCC------eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 229 VLVQACDSE-DDG------LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 229 vll~~~~~~-~~g------l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
++||.=+.. ..| ++++.+.+|. .|++. |+. +| .
T Consensus 262 lvlEelEHA~~RgA~I~AE~lGygls~Da---~HiT~--------------------P~~---------dG--------~ 301 (440)
T KOG1394|consen 262 LVLEELEHAKKRGAPIYAEVLGYGLSSDA---YHITS--------------------PDP---------DG--------A 301 (440)
T ss_pred EehHhHHHHHHcCCceeHHhhcCcccccc---cccCC--------------------CCC---------Cc--------c
Confidence 999864321 111 2223232221 12221 111 12 2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCch--hhhhcccccCccccC
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPME--RVISNLANYGNTSAA 361 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e--~~~~~l~~~Gn~~sa 361 (401)
....+++++|+.+|+.++||||+-.|..+..+-|. +.+.|+--.. ++.++..-.||+-.|
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGA 368 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGA 368 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhccCCcccccccccchhhhhccc
Confidence 34578999999999999999999999988776654 4445543332 455677788888433
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.8e-10 Score=102.79 Aligned_cols=100 Identities=13% Similarity=0.143 Sum_probs=84.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHH-HHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 111 SGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIP-KALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 111 ~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~-~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
..|..+-+|...+.+..+|+.+++|+.|+-|+++++.....-...++++ -.-|+|...+...++..|+|++.++...+.
T Consensus 56 fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~ 135 (435)
T KOG1389|consen 56 FKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAA 135 (435)
T ss_pred cccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHH
Confidence 4577888999999999999999999999999999986543333445554 456888777777889999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCC
Q 015758 190 HIRGGGFRNVLVIGGDALSRF 210 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~~ 210 (401)
.|++|.++..|-.+.|.++..
T Consensus 136 ~Ir~G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 136 KIRAGFYDIGLAAGVESMTTN 156 (435)
T ss_pred HHhcCceeeecccchhhhccc
Confidence 999999999999999998754
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.7e-10 Score=101.18 Aligned_cols=98 Identities=30% Similarity=0.275 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCC--CCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTP--EDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~--~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~ 189 (401)
.+.+..+|..-|++.+|+.+++.++.+|.+|+++... .+....+..+.-+.|.|.+.+++.|+.=|.+++.++..+++
T Consensus 24 Kg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNgaQ 103 (396)
T KOG1391|consen 24 KGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGAQ 103 (396)
T ss_pred cCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHhhHH
Confidence 4668899999999999999999999999999987532 22333466677777888889999999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCC
Q 015758 190 HIRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~d~~s~ 209 (401)
-|.-|+.+.+|..+.|.+|.
T Consensus 104 ~I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 104 EICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred HhhcCcceEEEecCcccccc
Confidence 99999999999999999883
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.1e-09 Score=103.94 Aligned_cols=228 Identities=15% Similarity=0.052 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCc---hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHc
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFG---GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~---~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~ 193 (401)
.+|+.+|+++||+++|++++|||.++.++. +.... ....+...+|+....+...+. +++..++..|...|++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~~~~~~~~v~---~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAVPPINESHVE---MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCCCCCceEEec---CcHHHHHHHHHHHHhc
Confidence 899999999999999999999998864432 22111 123355667873223333344 3577899999999999
Q ss_pred CCCCeEEEEEeccCCC-C----C----C--CC------------------------------------------CCC---
Q 015758 194 GGFRNVLVIGGDALSR-F----T----D--WT------------------------------------------DRG--- 217 (401)
Q Consensus 194 g~~~~vLvv~~d~~s~-~----~----~--~~------------------------------------------dr~--- 217 (401)
|.++.|||++.|+++. . . + |. ++.
T Consensus 100 G~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~ 179 (352)
T PRK07937 100 GEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEP 179 (352)
T ss_pred CCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhc
Confidence 9999999999997542 0 0 0 10 000
Q ss_pred --------------------ccccccceeEEEEEeeccCC-CCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCccc
Q 015758 218 --------------------SCILFGDAAGAVLVQACDSE-DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVL 276 (401)
Q Consensus 218 --------------------~~~lfGDGAaAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~ 276 (401)
.+...+|||+|+||.+.+.. +-+.-...+...+...+. .
T Consensus 180 rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~pv~I~g~~~~~~~--------~------------ 239 (352)
T PRK07937 180 SISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERPAWITGIEHRIES--------P------------ 239 (352)
T ss_pred cCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCcEEEEEEEEeeCC--------c------------
Confidence 01346899999999875421 111001111111100000 0
Q ss_pred ccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHH-cCCCcCCcCEEEecccCHHHHHHHHHHcCCCc-hhhhh---c
Q 015758 277 AFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEK-AGLTMSSIDWLLLHQANQRIIDAVANRLDVPM-ERVIS---N 351 (401)
Q Consensus 277 ~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~-agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~-e~~~~---~ 351 (401)
.+... +.. -...+++++++ +|++++|||.+-+|-......-...+.||+.. ..++. .
T Consensus 240 ~~~~~------------d~~------~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~ 301 (352)
T PRK07937 240 SLGAR------------DLT------RSPSTALAAEAATGGDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGA 301 (352)
T ss_pred ccccc------------ccc------cHHHHHHHHHHhcCCCHHHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccc
Confidence 00000 000 01233445555 59999999999999999888888999999954 34442 2
Q ss_pred ccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeeh
Q 015758 352 LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGA 389 (401)
Q Consensus 352 l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~ 389 (401)
+ . ||...++-...+.|+..+-+-+..++.|..+.|.
T Consensus 302 l-~-ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~Gg 337 (352)
T PRK07937 302 L-A-ANPMFAAGLERIGEAARHIWDGSARRALAHATSG 337 (352)
T ss_pred h-h-cCchhHHHHHHHHHHHHHHhccCCCEEEEecccc
Confidence 4 3 8888778888888888763333457777777664
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.2e-10 Score=103.92 Aligned_cols=118 Identities=31% Similarity=0.391 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCcCCC-----CEEEEEecCCCC------------------------CCc-hHHHHHHHcCC
Q 015758 115 SLTGLAVEAASRALQMAEVNPEDV-----DLVLMCTSTPED------------------------LFG-GATQIPKALGC 164 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~~~~I-----d~li~~t~~~~~------------------------~~~-~a~~i~~~lGl 164 (401)
....|+..++++||+++|++++++ =.|+++++.++. ... .+.+|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 467899999999999999988543 235556665421 011 26799999999
Q ss_pred CCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEec-cCCCC----------CCC------CC-CCcccccccee
Q 015758 165 KNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGD-ALSRF----------TDW------TD-RGSCILFGDAA 226 (401)
Q Consensus 165 ~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d-~~s~~----------~~~------~d-r~~~~lfGDGA 226 (401)
+ .+.+.+..+|++++.||..|.++|++|+++.+||+++| ..+.. +.. .+ ....+++||||
T Consensus 166 ~--G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gEGa 243 (254)
T PF00109_consen 166 R--GPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGEGA 243 (254)
T ss_dssp ---SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-EE
T ss_pred C--CccccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEECce
Confidence 4 78999999999999999999999999999999999999 44421 111 11 12458999999
Q ss_pred EEEEEeec
Q 015758 227 GAVLVQAC 234 (401)
Q Consensus 227 aAvll~~~ 234 (401)
+++||++.
T Consensus 244 ~~~vLe~~ 251 (254)
T PF00109_consen 244 GALVLERL 251 (254)
T ss_dssp EEEEEEEH
T ss_pred EEEEEEEh
Confidence 99999974
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.2e-08 Score=106.88 Aligned_cols=291 Identities=21% Similarity=0.322 Sum_probs=182.6
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh-C-------Cchhhhhh--------------------hcCcceeEecCCCCCH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV-D-------TSDEWISV--------------------RTGIRNRRVLSGKESL 116 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~-~-------~~~~~i~~--------------------~~Gi~~R~~~~~~e~~ 116 (401)
...|.|.|+.--+|+-. +.+++.+.+ + .+-.|-.. .+|+..+..-. -++.
T Consensus 10 ~edIvIsG~sgklPes~-nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~~-MDPq 87 (2376)
T KOG1202|consen 10 QEDIVISGMSGKLPESD-NVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANT-MDPQ 87 (2376)
T ss_pred CCcEEEeccCCCCCCcc-cHHHHhhhhhcccccccCCcccccccccCCchhhcchhhhhhhcccccCcCcccccc-cCHH
Confidence 45689999999999865 455555432 1 11133222 33333332222 2468
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCC----EEEEEecCC----------CCC-----Cch-----HHHHHHHcCCCCCCeeEe
Q 015758 117 TGLAVEAASRALQMAEVNPEDVD----LVLMCTSTP----------EDL-----FGG-----ATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id----~li~~t~~~----------~~~-----~~~-----a~~i~~~lGl~~~~~~~~ 172 (401)
..|..++.++|+-++||+|.++. .+..+.+.+ +.. .+. +++|...+-+ ..+.|.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~s 165 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSFS 165 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCchh
Confidence 99999999999999999998863 233332221 111 111 4555566666 378888
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC------CCCC---CCCC---------ccccccceeEEEEEeec
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR------FTDW---TDRG---------SCILFGDAAGAVLVQAC 234 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~------~~~~---~dr~---------~~~lfGDGAaAvll~~~ 234 (401)
+..+|++.+.+|..|.+-++.|++++++|.++...-+ |.+. ++.+ +..--.||.+|++|++.
T Consensus 166 ~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk 245 (2376)
T KOG1202|consen 166 VDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRK 245 (2376)
T ss_pred hhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehh
Confidence 8999999999999999999999999999999887532 2111 2222 23456799999999985
Q ss_pred cCCCCCeeE----EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHH
Q 015758 235 DSEDDGLIS----FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESA 310 (401)
Q Consensus 235 ~~~~~gl~~----~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~a 310 (401)
.. ...++. ....+||- ...| +.||.. +.-.+.|++.
T Consensus 246 ~~-ArRvYAtilnartNTDGf------------------KEqG--vTfP~G-------------------~~Q~qLi~e~ 285 (2376)
T KOG1202|consen 246 SL-ARRVYATILNARTNTDGF------------------KEQG--VTFPSG-------------------DMQEQLIRET 285 (2376)
T ss_pred HH-HHHHHHHhhccccCCCch------------------hhcC--ccCCCc-------------------HHHHHHHHHH
Confidence 42 122221 11112221 0112 135532 2223789999
Q ss_pred HHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCch---hhhhcccccCccccChHHHHHHHHH---Hc------
Q 015758 311 LEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPME---RVISNLANYGNTSAASIPLALDEAV---RS------ 373 (401)
Q Consensus 311 L~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e---~~~~~l~~~Gn~~sasi~~~L~~~l---~~------ 373 (401)
.+++|++++++-|+-.|..+.++-|. +.+.+=-+.. -+=++..+.||.-.||-..+|...+ ++
T Consensus 286 Yse~Gl~P~sv~YvEAHGtGTkVGDpQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~N 365 (2376)
T KOG1202|consen 286 YSEAGLNPESVVYVEAHGTGTKVGDPQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPN 365 (2376)
T ss_pred HHhcCCCcccEEEEEeccCCCCCCChHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCc
Confidence 99999999999999999998776542 3333321111 1114556888887777666655543 22
Q ss_pred ---------------CCCC--------CCCEEEEEeeehhhhheeeEEE
Q 015758 374 ---------------GKVK--------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 374 ---------------g~~~--------~Gd~ill~~~G~G~s~~a~llr 399 (401)
|+++ +|..|-+-+||-|.+-.-.+||
T Consensus 366 LHy~tPNp~ip~L~dGrLkVVd~~lp~~GGivGiNSFGFGGsN~HviLk 414 (2376)
T KOG1202|consen 366 LHYNTPNPEIPALVDGRLKVVDRPLPWRGGIVGINSFGFGGSNAHVILK 414 (2376)
T ss_pred cccCCCCCCcchhccceeEEecCCCCccCceeeeeccccCCCceeEEec
Confidence 2332 5778889999999988877776
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.5e-09 Score=95.10 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=77.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
+-+-.||+.+|..++|+++++.-++|+.-+++-..++.. ...+...++|+. ..+.|.++++|+++..+|.+|.+.|+
T Consensus 26 ~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst--cgqraiyevgmt-gipi~nvnnncatgssalflakqiie 102 (408)
T KOG1406|consen 26 DWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST--CGQRAIYEVGMT-GIPIYNVNNNCATGSSALFLAKQIIE 102 (408)
T ss_pred CCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc--cchHHHHhcccc-CcceeeccCccccCchHHHHHHHHHh
Confidence 456789999999999999999988887655543333321 234556689994 68999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 015758 193 GGGFRNVLVIGGDALSR 209 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~ 209 (401)
+|..+.||..+.|++++
T Consensus 103 sgn~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 103 SGNSDCVLALGFEKMER 119 (408)
T ss_pred cCCcceEEeechhhhCC
Confidence 99999999999999874
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.8e-08 Score=90.48 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=84.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCc-hHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFG-GATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~-~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
|.-+.+|+.+|.+.+|++..++.+.||+||++|...+.-.+ .+...+-.-|.+...++.+++.+|-+.-.|+.+...+|
T Consensus 63 dlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvtmacissn~amttgmgli 142 (465)
T KOG1392|consen 63 DLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLI 142 (465)
T ss_pred hhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceeeeehhccchhhhccceeE
Confidence 44578999999999999999999999999999987654433 46666667788888899999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 015758 192 RGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~ 209 (401)
.+|.++.++..+.|.+|.
T Consensus 143 atg~~dvivaggvelmsd 160 (465)
T KOG1392|consen 143 ATGNADVIVAGGVELMSD 160 (465)
T ss_pred eeCCcCEEEEcceeeccc
Confidence 999999999999999884
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.4e-06 Score=87.32 Aligned_cols=110 Identities=24% Similarity=0.159 Sum_probs=82.6
Q ss_pred hcCcceeE-ecCCCCCHHHHHHHHHHHHHHhC--CCCcCCCCEEEEEecCCCC--CCchHHHHHHHcCCCCCCeeEeeCc
Q 015758 101 RTGIRNRR-VLSGKESLTGLAVEAASRALQMA--EVNPEDVDLVLMCTSTPED--LFGGATQIPKALGCKNNPLAYDITA 175 (401)
Q Consensus 101 ~~Gi~~R~-~~~~~e~~~~la~~Aa~~aL~~a--gi~~~~Id~li~~t~~~~~--~~~~a~~i~~~lGl~~~~~~~~i~~ 175 (401)
+|.+.++. ....+....++.....+..+++. ++++.+||.+++++..+.. ....+.+++..+|++.+.+.+.|+.
T Consensus 11 rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~ 90 (392)
T COG0183 11 RTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNR 90 (392)
T ss_pred cCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEec
Confidence 34444443 22223445555555555555432 5677778888998765542 3356889999999976699999999
Q ss_pred cChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC
Q 015758 176 ACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF 210 (401)
Q Consensus 176 ~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~ 210 (401)
+|+|++.++..|++.|++|.++.+|+++.|.+|..
T Consensus 91 ~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 91 ACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred cchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCC
Confidence 99999999999999999999999999999999864
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.14 E-value=6.2e-06 Score=68.79 Aligned_cols=96 Identities=25% Similarity=0.183 Sum_probs=76.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcc--cccCccccChHHHHHHHHHHcCCCCCCCE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL--ANYGNTSAASIPLALDEAVRSGKVKPGHT 381 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l--~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ 381 (401)
..+++++|+++|++++|||.+-+|.+.....-...+.||+++++++.+- --+||...+|-...+.+++.+-+-+.|++
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~~~~~ 104 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQLRRRGGRY 104 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHHHHhchhh
Confidence 3788899999999999999999999999999999999999999987543 26899999998888877777644456888
Q ss_pred EEEEeeehhhhheeeEEE
Q 015758 382 IAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 382 ill~~~G~G~s~~a~llr 399 (401)
.+....+.|..-.+++++
T Consensus 105 gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 105 GLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp EEEEEEETTTEEEEEEEE
T ss_pred hhHHhcccceeeEEEEEE
Confidence 888888888887888876
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00075 Score=64.34 Aligned_cols=111 Identities=23% Similarity=0.347 Sum_probs=68.1
Q ss_pred EEchHHHHHHHHHHHHHHHHHHHHHc---------CCCcCCcCEEEecccCHHHHHHHHHHc------------------
Q 015758 289 YMNGKEVFRFAVRVVPQTIESALEKA---------GLTMSSIDWLLLHQANQRIIDAVANRL------------------ 341 (401)
Q Consensus 289 ~m~g~~v~~~~~~~~~~~i~~aL~~a---------gl~~~dId~~i~Hq~~~~i~~~i~~~l------------------ 341 (401)
.+||+--....++.+..+.+...++. +...+|+|++++|.|..++.+.-..+|
T Consensus 29 ~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~klv~Ka~~rl~~~D~~~~~~~~~~~~~~ 108 (282)
T PF08540_consen 29 VVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYCKLVQKAFARLLYNDFLRNPSSEEFEEID 108 (282)
T ss_dssp EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSHHHHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred EEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCchHHHHHHHHHHHHhhhhhccccccccccc
Confidence 45776555555666666666666553 778899999999999988876532221
Q ss_pred -------CCCch----------------------hhhh---cccccCccccChHHHHHHHHH--HcCCCCCCCEEEEEee
Q 015758 342 -------DVPME----------------------RVIS---NLANYGNTSAASIPLALDEAV--RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 342 -------gl~~e----------------------~~~~---~l~~~Gn~~sasi~~~L~~~l--~~g~~~~Gd~ill~~~ 387 (401)
+++.+ |+.. .-.+.||+++||+.+.|..++ .+...-.|++|+++++
T Consensus 109 ~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSY 188 (282)
T PF08540_consen 109 AELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSY 188 (282)
T ss_dssp CCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEE
T ss_pred hhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEe
Confidence 01110 1111 124889999999999999999 3344447999999999
Q ss_pred ehhhhheeeEEE
Q 015758 388 GAGLTWGSAILR 399 (401)
Q Consensus 388 G~G~s~~a~llr 399 (401)
|+|......-++
T Consensus 189 GSG~~s~~fs~~ 200 (282)
T PF08540_consen 189 GSGLASEFFSGR 200 (282)
T ss_dssp ETTTEEEEEEEE
T ss_pred cCCcceeEEEEE
Confidence 999876655444
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A .... |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.017 Score=53.01 Aligned_cols=112 Identities=22% Similarity=0.132 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCC---------------CCc----------hHHHHHHHcCCCCCCe
Q 015758 115 SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPED---------------LFG----------GATQIPKALGCKNNPL 169 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~---------------~~~----------~a~~i~~~lGl~~~~~ 169 (401)
....|++.++.+++++. +++|.+|++|..++. ..| .+.++.-..|. ..+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 68999999999999653 578899999987641 111 14666777776 478
Q ss_pred eEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC--CCCCCCccccccceeEEEEEeecc
Q 015758 170 AYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT--DWTDRGSCILFGDAAGAVLVQACD 235 (401)
Q Consensus 170 ~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~--~~~dr~~~~lfGDGAaAvll~~~~ 235 (401)
...|..+-.+|..||.-|..++..| .+.||||..|...... .+.+. .....--|.|++|++.+
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~--~~~~~~~A~al~L~~~~ 171 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE--RDPPFPYALALVLSPGD 171 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc--cCCCcCEEEEEEecCCC
Confidence 8889999999999999999999999 8999999999865321 11111 11223467788887643
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0033 Score=52.12 Aligned_cols=72 Identities=29% Similarity=0.336 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCc--hhhh--hcccccCccccChHHHHHHHHH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPM--ERVI--SNLANYGNTSAASIPLALDEAV 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~--e~~~--~~l~~~Gn~~sasi~~~L~~~l 371 (401)
..+.++++++|+++|++++|||++..|..+....|..+ +.++-.. ..+. .....+||+.+++-.+.|...+
T Consensus 25 ~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~ 104 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKAL 104 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHH
Confidence 35568899999999999999999999999988776543 4454332 1222 4557999999999988877654
Q ss_pred H
Q 015758 372 R 372 (401)
Q Consensus 372 ~ 372 (401)
.
T Consensus 105 l 105 (119)
T PF02801_consen 105 L 105 (119)
T ss_dssp H
T ss_pred H
Confidence 3
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.0099 Score=46.50 Aligned_cols=73 Identities=21% Similarity=0.244 Sum_probs=44.3
Q ss_pred HHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHcCCCCeEEEEE
Q 015758 128 LQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRGGGFRNVLVIG 203 (401)
Q Consensus 128 L~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~ 203 (401)
|+++|++++|||+++...... .....+.+.+|++++....++ +.+|++-..+|..+..-=+-.+.+++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~~~----~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASK----KILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSH----HHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCCH----HHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 789999999999999764332 245668999999754433334 256666666665554421222457888887
Q ss_pred e
Q 015758 204 G 204 (401)
Q Consensus 204 ~ 204 (401)
.
T Consensus 77 ~ 77 (90)
T PF08541_consen 77 F 77 (90)
T ss_dssp E
T ss_pred E
Confidence 4
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.094 Score=48.42 Aligned_cols=88 Identities=20% Similarity=0.183 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEecc----cCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQ----ANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR 372 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq----~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~ 372 (401)
+.+.+...++++++|+++|++++||+++++-. ..+.+--.+.++||++++--.. -.+.+||+.-...|..+.+
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~---~i~~~GC~gg~~~L~~A~~ 174 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRT---PIFGMGCAGGAAGLRRAKD 174 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEE---EEES-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEE---EEeccchhhHHHHHHHHHH
Confidence 44566777899999999999999999999633 3345556899999998754332 2345566655555533322
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
=-+-.||.+||++..
T Consensus 175 ~~~~~p~a~VLvv~v 189 (226)
T PF00195_consen 175 IARANPGARVLVVCV 189 (226)
T ss_dssp HHHHSTT-EEEEEEE
T ss_pred HHhCCccceEEEEEE
Confidence 112258899988765
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.13 Score=49.14 Aligned_cols=88 Identities=18% Similarity=0.194 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEec----ccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLH----QANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR 372 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~H----q~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~ 372 (401)
+.+...+..+++++|+++|++++|||.++.. .+.+.+-..+.+++|+..+-... +.+-+||++-.++++-+-.
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~---nLsGMGCsAgliai~lA~~ 157 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSY---NLSGMGCSAGLIAIDLAKD 157 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeee---cccCCcchhhHHHHHHHHH
Confidence 3344567789999999999999999998854 45578888999999998765533 4456666666666554322
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
=-+..|+.++++++.
T Consensus 158 lL~~~p~~~ALVVst 172 (290)
T PF08392_consen 158 LLQAHPNSYALVVST 172 (290)
T ss_pred HHHhCCCcEEEEEEE
Confidence 223456888887764
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.18 Score=52.10 Aligned_cols=87 Identities=13% Similarity=0.138 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEecc----cCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQ----ANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR 372 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq----~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~ 372 (401)
+.+...+.++++++|+++|++++|||.++... +.+.+--.+.++||+.++-.. + +.+-++|+.-.++|+-+-.
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~a--f-dL~gmGCsggl~aL~lA~~ 246 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS--F-NLGGMGCSAGVIAVDLAKD 246 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeE--E-ecccchhhHHHHHHHHHHH
Confidence 44556777999999999999999999998732 234556678899999764322 2 4444667777776655422
Q ss_pred cCCCCCCCEEEEEe
Q 015758 373 SGKVKPGHTIAAAG 386 (401)
Q Consensus 373 ~g~~~~Gd~ill~~ 386 (401)
--+..++.++|+++
T Consensus 247 ll~~~~~~~aLVVs 260 (502)
T PLN02377 247 MLQVHRNTYAVVVS 260 (502)
T ss_pred HHHcCCCCEEEEEE
Confidence 11122455666554
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.25 Score=51.16 Aligned_cols=88 Identities=17% Similarity=0.169 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEec----ccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHH
Q 015758 296 FRFAVRVVPQTIESALEKAGLTMSSIDWLLLH----QANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAV 371 (401)
Q Consensus 296 ~~~~~~~~~~~i~~aL~~agl~~~dId~~i~H----q~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l 371 (401)
-+.+...+..+++++|+++|++++|||.++.. ++.+..--.+.+++|+..+-.. -+.+.++|+.-.++|+-+-
T Consensus 173 ~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~a---fdLsgmGCSggl~aLdlA~ 249 (511)
T PLN02192 173 RKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILS---YNLGGMGCSAGLISIDLAK 249 (511)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceE---EEcccchhhhHHHHHHHHH
Confidence 34455677899999999999999999998864 3345566678999998743221 2556677888887776553
Q ss_pred HcCCCCCCCEEEEEe
Q 015758 372 RSGKVKPGHTIAAAG 386 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~ 386 (401)
.-=+..++.++|+++
T Consensus 250 ~lL~a~~~~~aLVVs 264 (511)
T PLN02192 250 HLLQVHPNSYALVIS 264 (511)
T ss_pred HHHHcCCCCeEEEEE
Confidence 311234567777666
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.24 Score=49.51 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHc-----CCCCCCeeEee----CccChHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKAL-----GCKNNPLAYDI----TAACSGFLLGLVSA 187 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~l-----Gl~~~~~~~~i----~~~C~~~~~aL~~A 187 (401)
.+...++.+++|+++|+.++|||+++....... .-..+.++| |++.+.....+ +++|++...+|..+
T Consensus 271 ~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~----~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 271 VVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEY----FREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDEL 346 (378)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEeeCcccHH----HHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHH
Confidence 345578899999999999999999996433221 345677776 88644433344 35777777788766
Q ss_pred HHHHHcCCCCeEEEEEecc
Q 015758 188 ACHIRGGGFRNVLVIGGDA 206 (401)
Q Consensus 188 ~~~l~~g~~~~vLvv~~d~ 206 (401)
...=+-.+.++|++.+.+.
T Consensus 347 ~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 347 LNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHcCCCCCCCEEEEEEecc
Confidence 3311112357888877665
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.3 Score=49.17 Aligned_cols=88 Identities=10% Similarity=-0.040 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEecc----cCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQ----ANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR 372 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq----~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~ 372 (401)
+.+.+...++.+++|+++|++++|||+++... ..+.+--.+.++||++.+-.. -...|++|++...+|..+..
T Consensus 100 ~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~---~~~~~~gC~g~~~aL~~A~~ 176 (393)
T PLN03172 100 VEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKR---FMMYQQGCFAGGTVLRLAKD 176 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceE---EeeeCCchHHHHHHHHHHHH
Confidence 34556667899999999999999999987433 234445568899999765211 12346777777777765533
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
--+-.++.++|+++.
T Consensus 177 ~~~~~~~~~vLVV~~ 191 (393)
T PLN03172 177 LAENNAGSRVLVVCS 191 (393)
T ss_pred HHHcCCCCeEEEEEE
Confidence 112235677776654
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.3 Score=50.24 Aligned_cols=85 Identities=14% Similarity=0.210 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecc----cCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQ----ANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq----~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
+.....++++++|+++|++++|||.+|..- +.+.+--.+.+++|++.+-.. -+.+-++|+.-.++|+-+-.=-
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~---fdL~gmGCSggl~aL~lA~~ll 224 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKS---LNLGGMGCSAGVIAIDAAKSLL 224 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceE---EEeccchhhhHHHHHHHHHHHH
Confidence 445667899999999999999999987533 345566678999999754322 2556678888888876653211
Q ss_pred CCCCCCEEEEEe
Q 015758 375 KVKPGHTIAAAG 386 (401)
Q Consensus 375 ~~~~Gd~ill~~ 386 (401)
+..++.++|+++
T Consensus 225 ~~~~~~~aLVVs 236 (478)
T PLN02932 225 QVHRNTYALVVS 236 (478)
T ss_pred HcCCCCeEEEEE
Confidence 122455666554
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.19 Score=49.67 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeE-----eeC-ccChHHHHHHHHHH
Q 015758 115 SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAY-----DIT-AACSGFLLGLVSAA 188 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~-----~i~-~~C~~~~~aL~~A~ 188 (401)
.....+.++++++|+++|++++|||++++...... ....+.+.||++.+.... ++. .++++...+|..+.
T Consensus 205 ~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~----~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 205 AYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGK----FYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChH----HHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH
Confidence 34566778999999999999999999997533222 355689999996433322 332 57888888887665
Q ss_pred HHHHcCCCCeEEEEE
Q 015758 189 CHIRGGGFRNVLVIG 203 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~ 203 (401)
..++.| +++|+++
T Consensus 281 ~~~~~G--d~vll~~ 293 (345)
T TIGR00748 281 DIAEPG--DRILAVS 293 (345)
T ss_pred HhcCCC--CEEEEEE
Confidence 544433 5677665
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.44 Score=47.91 Aligned_cols=88 Identities=10% Similarity=-0.040 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEeccc----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQA----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR 372 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~ 372 (401)
+.+.+...++++++|+++|++++|||+++.... .+.+--.+.++||++.+-.. ....+++|+....+|..+-.
T Consensus 100 ~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~---~~~~~~gC~g~~~aL~~A~~ 176 (391)
T PLN03173 100 VEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKR---FMMYQQGCFAGGTVLRLAKD 176 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCcccee---eehhcCccHHHHHHHHHHHH
Confidence 344566678999999999999999999875432 23444468899998764211 12346678777777766533
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
=-+-.++.++|+++.
T Consensus 177 ~~~~~~~~~vLVV~~ 191 (391)
T PLN03173 177 LAENNKGARVLVVCS 191 (391)
T ss_pred HHHhCCCCeEEEEEE
Confidence 112245677887653
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.39 Score=48.27 Aligned_cols=87 Identities=14% Similarity=0.061 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHc
Q 015758 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 298 ~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
.+.+...++.+++|+++|++++|||++++...+ +.+--.+.++||+++.-.. .--.|++|+....+|..+..=
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r---~~d~~~gC~g~~~aL~~A~~~ 176 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKR---VMMYQTGCFGGASVLRVAKDL 176 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCccee---eeeeCCccHHHHHHHHHHHHH
Confidence 345566789999999999999999999875433 3444468899999764211 123456777777777655331
Q ss_pred CCCCCCCEEEEEee
Q 015758 374 GKVKPGHTIAAAGF 387 (401)
Q Consensus 374 g~~~~Gd~ill~~~ 387 (401)
-+-.++.+||+++.
T Consensus 177 i~~~~~~~VLVV~~ 190 (389)
T PLN03168 177 AENNKGARVLAVAS 190 (389)
T ss_pred HHhCCCCEEEEEEE
Confidence 11235677776654
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=92.38 E-value=0.47 Score=46.43 Aligned_cols=83 Identities=14% Similarity=0.057 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc-----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA-----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~-----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
+...++++++|+++|++++|||.++.... ....-..+.++||++.+.....+ .+ +|++...+|..+..-=+
T Consensus 63 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v---~~-~C~~~~~al~~A~~~i~ 138 (338)
T PRK09258 63 DGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDV---SN-ACLGFLNGMLDAANMIE 138 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeeh---hh-hhHHHHHHHHHHHHHHH
Confidence 44568899999999999999999987443 23444568899999864332223 22 56666666555433111
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
....+++|+++.
T Consensus 139 ~g~~~~~Lvv~~ 150 (338)
T PRK09258 139 LGQIDYALVVSG 150 (338)
T ss_pred cCCCCEEEEEEe
Confidence 123466666554
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.5 Score=49.05 Aligned_cols=88 Identities=16% Similarity=0.173 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEeccc----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQA----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR 372 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~ 372 (401)
+.+...+-.+++++|+++|++++|||.+|..-. .+.+--.+.+++|+..+-.. -+.+-++|+.-.++|+-+-.
T Consensus 186 ~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~a---fdLsgmGCSggl~aL~lA~~ 262 (521)
T PLN02854 186 AEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKS---YNLGGMGCSAGLISIDLAND 262 (521)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceE---EecccchhhhHHHHHHHHHH
Confidence 334456678899999999999999999997422 23445568899998754221 25565777777777765522
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
==+..++.++|+++.
T Consensus 263 lL~~~~~~~aLVVst 277 (521)
T PLN02854 263 LLKANPNSYAVVVST 277 (521)
T ss_pred HHHhCCCCeEEEEEE
Confidence 111235667776653
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.72 Score=46.54 Aligned_cols=86 Identities=10% Similarity=-0.020 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEeccc----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHc
Q 015758 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQA----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 298 ~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
.+.+...++.+++|+++|++++|||+++.-.. .+.+--.+.++||+++.-.. .--.|++|+....+|..+..=
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r---~~d~~~gC~G~~~aL~~A~~l 181 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNR---LMMYQQGCFAGGTVLRVAKDL 181 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHH---HHhhcChhHHHHHHHHHHHHH
Confidence 44556668999999999999999998764322 23444568899999875211 123456777777777655331
Q ss_pred CCCCCCCEEEEEe
Q 015758 374 GKVKPGHTIAAAG 386 (401)
Q Consensus 374 g~~~~Gd~ill~~ 386 (401)
-+-.++.++|+++
T Consensus 182 ~~~~~~~~vLVV~ 194 (401)
T PLN03170 182 AENNRGARVLVVC 194 (401)
T ss_pred HHcCCCCeEEEEE
Confidence 1123466777664
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.23 Score=48.47 Aligned_cols=78 Identities=14% Similarity=0.221 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHHcC
Q 015758 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIRGG 194 (401)
Q Consensus 119 la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~~g 194 (401)
...++.+++|+++|++++|||++++..... .....++++||++.+.....+. .+|++...+|..+ ++.|
T Consensus 227 ~~~~~i~~~L~~~g~~~~did~~~~hq~~~----~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~g 299 (326)
T CHL00203 227 QVPAVIIKCLNALNISIDEVDWFILHQANK----RILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQNN 299 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHhC
Confidence 355678999999999999999998754322 1456789999997544433342 3455555555443 4444
Q ss_pred ---CCCeEEEEE
Q 015758 195 ---GFRNVLVIG 203 (401)
Q Consensus 195 ---~~~~vLvv~ 203 (401)
+.+++|+++
T Consensus 300 ~~~~Gd~vll~~ 311 (326)
T CHL00203 300 KIQPGQIIVLSG 311 (326)
T ss_pred CCCCCCEEEEEE
Confidence 346777766
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.62 Score=47.60 Aligned_cols=83 Identities=13% Similarity=0.197 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCC
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVK 377 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~ 377 (401)
.+-.+++++|+++|++++|||.++..... +..--.+.+++|++++-.. -+.+.+||+.-..+|+.+-.=-+..
T Consensus 137 ~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~---~dL~gmGCsggv~aL~lA~~ll~a~ 213 (466)
T PLN00415 137 VIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKT---YNLSGMGCSAGAISVDLATNLLKAN 213 (466)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceE---EEeccccchHHHHHHHHHHHHHHhC
Confidence 45578889999999999999998865433 3444568889999844322 2556677777777776553321234
Q ss_pred CCCEEEEEee
Q 015758 378 PGHTIAAAGF 387 (401)
Q Consensus 378 ~Gd~ill~~~ 387 (401)
++.++|+++.
T Consensus 214 ~~~~aLVVs~ 223 (466)
T PLN00415 214 PNTYAVIVST 223 (466)
T ss_pred CCCEEEEEEE
Confidence 6677776653
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.48 Score=46.21 Aligned_cols=79 Identities=16% Similarity=0.218 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~~ 193 (401)
....++.+++|+++|++++|||+++...... ..-..++++||++.+.....+. .+|++....|.. +++.
T Consensus 230 ~~~~~~i~~~L~~~gl~~~did~~~~H~~~~----~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~---~~~~ 302 (329)
T PRK07204 230 KYLMKFIDKLLMDAGYTLADIDLIVPHQASG----PAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE---AIKQ 302 (329)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---HHHc
Confidence 3456888999999999999999999654322 1356889999997544332332 234444444443 4444
Q ss_pred C---CCCeEEEEE
Q 015758 194 G---GFRNVLVIG 203 (401)
Q Consensus 194 g---~~~~vLvv~ 203 (401)
| +.+++|+++
T Consensus 303 g~~~~Gd~vll~~ 315 (329)
T PRK07204 303 KKVQRGNKILLLG 315 (329)
T ss_pred CCCCCCCEEEEEE
Confidence 4 346777665
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.8 Score=45.37 Aligned_cols=83 Identities=25% Similarity=0.372 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
..+...++++++|+++|++++|||.++..... +..-..+.++||++++... + ++...+|++...+|.-+ +
T Consensus 85 ~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~--~-dv~~~~C~~~~~al~~A~~~~ 161 (361)
T cd00831 85 ARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKR--Y-NLGGMGCSAGAIALDLAKDLL 161 (361)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccch--h-ccccccchhHHHHHHHHHHHH
Confidence 34556689999999999999999999874332 2233468889999764322 1 23323566666665544 3
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
+.+ +.+++|+++.
T Consensus 162 ~~~---~~~~aLvv~~ 174 (361)
T cd00831 162 EAN---PGARVLVVST 174 (361)
T ss_pred HHC---CCCEEEEEEe
Confidence 333 3467776654
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.71 Score=46.73 Aligned_cols=89 Identities=22% Similarity=0.266 Sum_probs=58.2
Q ss_pred HHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeC---------ccChHHHHHHHHHHHH
Q 015758 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDIT---------AACSGFLLGLVSAACH 190 (401)
Q Consensus 121 ~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~---------~~C~~~~~aL~~A~~~ 190 (401)
..|++++|+++|++++|||++.+. +.+ .......+.+|++.. .+.++ .|++|....+.+..++
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~-----eaFa~~~l~~~~~lg~~~~--~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL 390 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEIN-----EAFAVVAEKFIRDLDLDRD--KVNVNGGAIALGHPIGATGSILIGTVLDEL 390 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEc-----hHHHHHHHHHHHHcCCChh--hccccCCHHhcCCchhHHHHHHHHHHHHHH
Confidence 579999999999999999999853 222 234466778887432 22222 3677777777777777
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCCccccccceeEEEEEee
Q 015758 191 IRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQA 233 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAaAvll~~ 233 (401)
.+.| .++.|+.. ...|--+.|+|||+
T Consensus 391 ~~~g-~~~Gl~~~----------------c~~GG~g~A~lle~ 416 (417)
T PRK06025 391 ERRG-LKRGLVTM----------------CAAGGMAPAIIIER 416 (417)
T ss_pred HHhC-CCeEEEEE----------------EeeccceeEEEEEe
Confidence 7766 45554432 13455566777764
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.93 Score=45.72 Aligned_cols=85 Identities=12% Similarity=0.015 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeccc----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQA----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
..+...++.+++|+++|++++|||.+++... .+..--.+.++||++..-.. ....++ +|+..+.+|..+..=-
T Consensus 108 a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~--~~~~~~-gC~g~~~aL~~A~~li 184 (399)
T PLN03171 108 VPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRR--TMLHLN-GCFAGAAALRLAKDLA 184 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccce--eeccCC-ccHHHHHHHHHHHHHH
Confidence 4456668999999999999999999987222 23333468889998764211 113444 8888888876653310
Q ss_pred CCCCCCEEEEEe
Q 015758 375 KVKPGHTIAAAG 386 (401)
Q Consensus 375 ~~~~Gd~ill~~ 386 (401)
+-.+..++|+++
T Consensus 185 ~~~~~~~vLVv~ 196 (399)
T PLN03171 185 ENNRGARVLVVA 196 (399)
T ss_pred HhCCCCeEEEEE
Confidence 112345666554
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.37 Score=48.20 Aligned_cols=79 Identities=19% Similarity=0.270 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~~ 193 (401)
+...++++++|+++|++++|||+++...... ..-..++++||++.+....++. .++++...+|..+ ++.
T Consensus 280 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~----~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~~~ 352 (379)
T PLN02326 280 RCVPQVIESALQKAGLTAESIDWLLLHQANQ----RIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---VRS 352 (379)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---HHc
Confidence 3345678899999999999999998644322 1345689999997544444442 3455555555444 444
Q ss_pred C---CCCeEEEEE
Q 015758 194 G---GFRNVLVIG 203 (401)
Q Consensus 194 g---~~~~vLvv~ 203 (401)
| +.+++|+++
T Consensus 353 g~~~~Gd~vll~~ 365 (379)
T PLN02326 353 GKVKKGDVIATAG 365 (379)
T ss_pred CCCCCCCEEEEEE
Confidence 3 346777766
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.42 Score=46.35 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~~ 193 (401)
+...++.+++|+++|++++|||++++..... ..-..+++.||++.+.....+. .++++.+.+|..+ +++
T Consensus 219 ~~~~~~~~~~l~~~g~~~~di~~~~~h~~~~----~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~---~~~ 291 (318)
T TIGR00747 219 RKMGDVVEETLEANGLDPEDIDWFVPHQANL----RIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL---LRT 291 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---HHc
Confidence 3456788999999999999999999643322 2466889999996433333332 3445555555443 333
Q ss_pred C---CCCeEEEEEe
Q 015758 194 G---GFRNVLVIGG 204 (401)
Q Consensus 194 g---~~~~vLvv~~ 204 (401)
| +.+++|+++.
T Consensus 292 ~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 292 GRIKPGDLLLLVAF 305 (318)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 3467777763
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.37 Score=46.95 Aligned_cols=81 Identities=14% Similarity=0.155 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIR 192 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~ 192 (401)
.+...++.+++|+++|++++|||++++....+ ..-..+.++||++++.....+. .++++...+|.. +++
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~~~----~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~---~~~ 298 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQANA----RIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSL---ANL 298 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHH---HHH
Confidence 44556788999999999999999998743222 2456788999996543332332 344444455543 333
Q ss_pred cC---CCCeEEEEEe
Q 015758 193 GG---GFRNVLVIGG 204 (401)
Q Consensus 193 ~g---~~~~vLvv~~ 204 (401)
.+ +.+++|+++.
T Consensus 299 ~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 299 EQPLREGERLLFAAA 313 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 33 3467887774
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.47 E-value=0.73 Score=44.74 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHHcC-
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIRGG- 194 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~~g- 194 (401)
..++.+++|+++|++++|||++++....+ .....++++||++.+.....+. .+|++....|.. +++.|
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~~~~----~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~---~~~~g~ 299 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQANL----RIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDL---ALEQGK 299 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHH---HHHcCC
Confidence 45678999999999999999999754221 2356889999996443333332 345555555543 34544
Q ss_pred --CCCeEEEEEe
Q 015758 195 --GFRNVLVIGG 204 (401)
Q Consensus 195 --~~~~vLvv~~ 204 (401)
+.+++|+++.
T Consensus 300 ~~~Gd~vll~~~ 311 (325)
T PRK12879 300 IKPGDTLLLYGF 311 (325)
T ss_pred CCCCCEEEEEEE
Confidence 3457777763
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=90.39 E-value=0.86 Score=45.84 Aligned_cols=86 Identities=12% Similarity=0.028 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeccc----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQA----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
..+...++.+++|+++|++++|||.++.... .+..--.+.++||++.+-.. . ---+.+|+....+|..+..--
T Consensus 106 ~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~--~-~d~~~gC~g~~~aL~~A~~~~ 182 (391)
T PLN03169 106 VTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQR--V-MLYFLGCSGGVAGLRVAKDIA 182 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCccee--e-ecccChhHHHHHHHHHHHHHH
Confidence 3455668899999999999999999876543 23333468889999864311 0 112357777777775553311
Q ss_pred CCCCCCEEEEEee
Q 015758 375 KVKPGHTIAAAGF 387 (401)
Q Consensus 375 ~~~~Gd~ill~~~ 387 (401)
+-.+..++|+++.
T Consensus 183 ~~~~~~~vLvv~~ 195 (391)
T PLN03169 183 ENNPGSRVLLTTS 195 (391)
T ss_pred HhCCCCeEEEEEE
Confidence 1123566776553
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=89.29 E-value=1.2 Score=43.76 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHcC
Q 015758 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRGG 194 (401)
Q Consensus 119 la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~g 194 (401)
...++.+++|+++|++++|||+++.....+ ..-..++++||++.+.. +.+ +.++++....|..+ +++|
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~~~~----~~~~~~~~~Lgl~~~~~-~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILHMKR----SAHIALLEGLGLTEEQA-IYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCcCH----HHHHHHHHHcCCCHHHe-EeHHhccchhhhhHHHHHHHH---HHcC
Confidence 456889999999999999999988644321 13457899999964332 223 23444555555433 4443
Q ss_pred ---CCCeEEEEEe
Q 015758 195 ---GFRNVLVIGG 204 (401)
Q Consensus 195 ---~~~~vLvv~~ 204 (401)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 3467777763
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=89.27 E-value=0.88 Score=43.94 Aligned_cols=81 Identities=22% Similarity=0.301 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIR 192 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~ 192 (401)
.+...++.+++|+++|++++|||+++....... .-..+.+.||++.+.....+. .++++....|.. +++
T Consensus 222 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~~----~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~---~~~ 294 (320)
T cd00830 222 VRLMPESIEEALEKAGLTPDDIDWFVPHQANLR----IIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDE---AIE 294 (320)
T ss_pred HHhhHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHH---HHH
Confidence 345568899999999999999999987543221 356789999996443322332 233344444433 344
Q ss_pred cC---CCCeEEEEEe
Q 015758 193 GG---GFRNVLVIGG 204 (401)
Q Consensus 193 ~g---~~~~vLvv~~ 204 (401)
.| +.+++|+++.
T Consensus 295 ~~~~~~G~~vll~~~ 309 (320)
T cd00830 295 EGKLKKGDLVLLLGF 309 (320)
T ss_pred cCCCCCCCEEEEEEE
Confidence 44 3578887764
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.18 E-value=1.3 Score=44.85 Aligned_cols=80 Identities=21% Similarity=0.247 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++..+.. ..+-..+...+|++..+-..++ |..|+|-..++..+ ++
T Consensus 28 eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V----~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 28 ELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQL----DRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeeh----hhhhhHHHHHHHHHHHHHH
Confidence 345588999999999999999999865432 3344567788898753322233 23444544544444 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. -|.+|+.++
T Consensus 104 sG~---~d~vLv~G~ 115 (404)
T PRK06205 104 TGA---ADVVIAGGA 115 (404)
T ss_pred cCC---CCEEEEeee
Confidence 443 356666543
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=88.75 E-value=1.5 Score=43.94 Aligned_cols=80 Identities=21% Similarity=0.248 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++..+.. ......+...+|++......++ |.+|++-..+|..+ ++
T Consensus 24 ~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v----~~~c~s~~~al~~A~~~I~ 99 (386)
T cd00751 24 DLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV----NRVCGSGLQAVALAAQSIA 99 (386)
T ss_pred HHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh----ccccHHHHHHHHHHHHHHH
Confidence 344588999999999999999999875331 3333457788998753222222 33455555555444 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. -|.+|+.++
T Consensus 100 sG~---~~~vLv~g~ 111 (386)
T cd00751 100 AGE---ADVVVAGGV 111 (386)
T ss_pred CCC---CCeEEEeee
Confidence 443 266776553
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.55 E-value=0.97 Score=44.58 Aligned_cols=81 Identities=19% Similarity=0.202 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeE-----ee-CccChHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAY-----DI-TAACSGFLLGLVSAACH 190 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~-----~i-~~~C~~~~~aL~~A~~~ 190 (401)
.+...++.+++|+++|++++|||++++..... ..-..++++||++.+.... ++ +.++++...+|..+..-
T Consensus 208 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~----~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~ 283 (347)
T PRK04262 208 FKHIISAAKGLMEKLGLKPSDYDYAVFHQPNG----KFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV 283 (347)
T ss_pred HHHHHHHHHHHHHHhCcCHHHhceeecCCCch----HHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh
Confidence 35677899999999999999999998653222 1356788999996443321 22 24556666666555432
Q ss_pred HHcCCCCeEEEEE
Q 015758 191 IRGGGFRNVLVIG 203 (401)
Q Consensus 191 l~~g~~~~vLvv~ 203 (401)
+ .+.+++|+++
T Consensus 284 ~--~~Gd~vll~~ 294 (347)
T PRK04262 284 A--KPGDRILVVS 294 (347)
T ss_pred C--CCCCEEEEEe
Confidence 2 2335666654
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=88.41 E-value=1.4 Score=43.52 Aligned_cols=89 Identities=19% Similarity=0.009 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEE-EecCCCCCCchHHHHHHHcCCCC-CCeeEe----eC-ccChHHHHHHHHHHHH
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLM-CTSTPEDLFGGATQIPKALGCKN-NPLAYD----IT-AACSGFLLGLVSAACH 190 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~-~t~~~~~~~~~a~~i~~~lGl~~-~~~~~~----i~-~~C~~~~~aL~~A~~~ 190 (401)
+=..++.+++|+++|++|++||+|+. +|.++.....-+..+.+.+|-.. ..+... +. .+.+++...+..+...
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~ 313 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAA 313 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence 34568999999999999999999875 33333221112334455555311 112222 22 3445555666666677
Q ss_pred HHcC--CCCeEEEEEecc
Q 015758 191 IRGG--GFRNVLVIGGDA 206 (401)
Q Consensus 191 l~~g--~~~~vLvv~~d~ 206 (401)
++.| +..++||.+++-
T Consensus 314 ~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 314 SRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HHcCcCCCCcEEEEecCC
Confidence 7776 457888888543
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.40 E-value=1.4 Score=44.31 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHH---HHH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDE---AVR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~---~l~ 372 (401)
+...++++++|+++|++++|||.++..+.. ...-+.+...+|++...-..++.. .|+|-..++.. .++
T Consensus 28 eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~----~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 28 ELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNK----VCASGLRAVTLADQIIR 103 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhh----hhhHHHHHHHHHHHHHH
Confidence 345688999999999999999999886542 223344677889875443234433 34444444433 345
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. .|.+|+.++
T Consensus 104 sG~---~d~vLvvG~ 115 (393)
T PRK08235 104 AGD---ASVIVAGGM 115 (393)
T ss_pred CCC---CCEEEEEee
Confidence 543 366776654
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=88.25 E-value=1.1 Score=44.75 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHH-cCCCC--CCeeEee----CccChHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKA-LGCKN--NPLAYDI----TAACSGFLLGLVSAAC 189 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~-lGl~~--~~~~~~i----~~~C~~~~~aL~~A~~ 189 (401)
.+...++.+++|+++|++++|||+++....... .-..+.++ ||+.. +.....+ +.+|++...+|..+..
T Consensus 270 ~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~----~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~~ 345 (372)
T PRK07515 270 CPMVAEHIVEHLAENGLTPADVKRFWLHQANIN----MNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHSD 345 (372)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHhc
Confidence 344678999999999999999999986432221 22234555 66531 1112223 3577777778876644
Q ss_pred HHHcCCCCeEEEEEe
Q 015758 190 HIRGGGFRNVLVIGG 204 (401)
Q Consensus 190 ~l~~g~~~~vLvv~~ 204 (401)
.++ +.+++|+++.
T Consensus 346 ~~~--~Gd~vll~~~ 358 (372)
T PRK07515 346 DLA--AGDLGVICSF 358 (372)
T ss_pred cCC--CCCEEEEEEe
Confidence 333 3467777663
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=88.24 E-value=2 Score=41.73 Aligned_cols=78 Identities=24% Similarity=0.323 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-HHHH-HHHHHHcCCCchhhhhcccccCccccChHHHHHHHHH-HcCCCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-QRII-DAVANRLDVPMERVISNLANYGNTSAASIPLALDEAV-RSGKVK 377 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-~~i~-~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l-~~g~~~ 377 (401)
+...++++++|+++|++++|||+++..... +.+. ..+.+.||+|. +.-||-|++..--+.+...+ +.|
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipssfvar~LGIP~------~gV~gACSTg~eAL~lAa~~VaSG--- 126 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTSFAARTLGIPY------LGLFGACSTSMEGLALAALIVNSG--- 126 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHHHHHHHhCCCc------cceeecCHHHHHHHHHHHHHHHcC---
Confidence 356689999999999999999999986543 2222 26778899764 55566666666666555443 333
Q ss_pred CCCEEEEEee
Q 015758 378 PGHTIAAAGF 387 (401)
Q Consensus 378 ~Gd~ill~~~ 387 (401)
..|++|.+..
T Consensus 127 ~Ad~VLavts 136 (334)
T PRK12404 127 GAKYVLTGAS 136 (334)
T ss_pred CCCEEEEEeC
Confidence 2467766554
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.19 E-value=1.5 Score=44.16 Aligned_cols=80 Identities=28% Similarity=0.287 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.+++.+.. ...-..+...+|++.+....++ |..|++-..++..+ ++
T Consensus 28 ~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V----~~~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 28 ELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTL----NKVCGSGLKALHLAAQAIR 103 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEe----cccchhHHHHHHHHHHHHH
Confidence 345588999999999999999999884421 2234557788998863322234 23555555555544 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. .|.+|+.++
T Consensus 104 sG~---~d~vLv~G~ 115 (393)
T PRK05656 104 CGD---AEVIIAGGQ 115 (393)
T ss_pred cCC---CCEEEEEEE
Confidence 443 366777554
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=88.19 E-value=2.5 Score=39.09 Aligned_cols=82 Identities=20% Similarity=0.167 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
+...++++++|+++|++++|||.+++.+.. ...-..+...+|++. ....++ +.+|++...+|+.+...=+
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~-~~~~~i----~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISG-GPAYSV----NQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCC-CCccee----ccHhHHHHHHHHHHHHHHH
Confidence 455688899999999999999999987643 233456888899862 111223 2455566666655543211
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
...-+++++.+.
T Consensus 84 ~g~~~~~lv~~~ 95 (254)
T cd00327 84 NGKADIVLAGGS 95 (254)
T ss_pred CCCCCEEEEEec
Confidence 112367776654
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.16 E-value=1.7 Score=43.71 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc-----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA-----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~-----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++.-+. +..+-..+...+|++...-..++.. +|+|-..++..+ ++
T Consensus 28 ~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~----~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 28 QLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNV----VCASGMLAVESAAREIM 103 (388)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeec----hhhHHHHHHHHHHHHHh
Confidence 45568999999999999999999987421 2233455778899986433334432 344434444444 44
Q ss_pred cCCCCCCCEEEEEe
Q 015758 373 SGKVKPGHTIAAAG 386 (401)
Q Consensus 373 ~g~~~~Gd~ill~~ 386 (401)
+|. .|.++..+
T Consensus 104 sG~---~d~vla~G 114 (388)
T PRK06366 104 LGE---RDLVIAGG 114 (388)
T ss_pred cCC---CCEEEEEe
Confidence 442 25666544
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=88.09 E-value=2.2 Score=42.30 Aligned_cols=125 Identities=18% Similarity=0.179 Sum_probs=64.5
Q ss_pred eeeecccCCCccccCccCCCcccccCCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHH
Q 015758 41 LCSSTIAGSEKSVSSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120 (401)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la 120 (401)
-|+...+|+..-...++.+..++...+++|.|++...+..... .| +....
T Consensus 200 d~~~~~DGAaA~vl~s~~~A~~l~~~pv~I~g~~~~~~~~~~~----------------------~~-----d~~~~--- 249 (352)
T PRK07937 200 DIAPITDGAAAVVLAAGDRARELRERPAWITGIEHRIESPSLG----------------------AR-----DLTRS--- 249 (352)
T ss_pred cCCCCCCcceEEEEecHHHHHHcCCCcEEEEEEEEeeCCcccc----------------------cc-----ccccH---
Confidence 5666666665523333333334445668888888765332100 00 11112
Q ss_pred HHHHHHHHHh-CCCCcCCCCEEEEEecCCCCCCc-hHHHHHHHcCCCCCCeeEeeC--------ccChHHHHHHHHHHHH
Q 015758 121 VEAASRALQM-AEVNPEDVDLVLMCTSTPEDLFG-GATQIPKALGCKNNPLAYDIT--------AACSGFLLGLVSAACH 190 (401)
Q Consensus 121 ~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~~~~-~a~~i~~~lGl~~~~~~~~i~--------~~C~~~~~aL~~A~~~ 190 (401)
.++++++++ +|++|+|||.+=+. +.|+ ......+.||+.. ...++.+ .+| +++.-+.-+...
T Consensus 250 -~~~~~a~~~aAgi~~~diD~~Ei~-----D~F~~~~l~~~e~lGl~g-~~pvN~~GG~l~ghp~ga-tG~~~~~e~~~Q 321 (352)
T PRK07937 250 -PSTALAAEAATGGDAGGVDVAELH-----APFTHQELILREALGLGD-KTKVNPSGGALAANPMFA-AGLERIGEAARH 321 (352)
T ss_pred -HHHHHHHHHhcCCCHHHCCEEEEe-----CCChHHHHHHHHHcCCCC-CCCcCCCccchhcCchhH-HHHHHHHHHHHH
Confidence 223344444 69999999999653 3333 3445567888732 2223322 233 344444445555
Q ss_pred HHcCCCCeEEEEE
Q 015758 191 IRGGGFRNVLVIG 203 (401)
Q Consensus 191 l~~g~~~~vLvv~ 203 (401)
|+.+..+++|+.+
T Consensus 322 L~g~~a~~~l~~~ 334 (352)
T PRK07937 322 IWDGSARRALAHA 334 (352)
T ss_pred HhccCCCEEEEec
Confidence 5655567777654
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=87.97 E-value=1.3 Score=42.76 Aligned_cols=79 Identities=23% Similarity=0.243 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHHcC
Q 015758 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIRGG 194 (401)
Q Consensus 119 la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~~g 194 (401)
...++.+++|+++|++++|||+++.....+ ..-..+.+.||++.+.....+. .+|++.+..|. .+++.|
T Consensus 220 ~~~~~i~~~l~~~g~~~~di~~~~~h~~~~----~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~~~~g 292 (319)
T PRK09352 220 ELAKVAREALEAAGLTPEDIDWLVPHQANL----RIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EAVRDG 292 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HHHHcC
Confidence 345688999999999999999999753322 2356788999996433322232 23444444443 344443
Q ss_pred ---CCCeEEEEEe
Q 015758 195 ---GFRNVLVIGG 204 (401)
Q Consensus 195 ---~~~~vLvv~~ 204 (401)
+.+++|+++.
T Consensus 293 ~~~~Gd~vll~s~ 305 (319)
T PRK09352 293 RIKRGDLVLLEGF 305 (319)
T ss_pred CCCCCCEEEEEEE
Confidence 3467777764
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=87.85 E-value=1.8 Score=43.43 Aligned_cols=80 Identities=23% Similarity=0.207 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++..+.. ...-..+...+|++.+....++. .+|++-..+|..+ ++
T Consensus 23 ~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~----~~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 23 DLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN----RQCASGLQAVILAAQLIR 98 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec----chhhHHHHHHHHHHHHHH
Confidence 345588999999999999999999875421 22234577888987533222332 3455555555444 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. -+.+|+.++
T Consensus 99 sG~---~~~vLv~g~ 110 (386)
T TIGR01930 99 AGE---ADVVVAGGV 110 (386)
T ss_pred CCC---CCEEEEEEe
Confidence 443 256776553
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.84 E-value=1.8 Score=43.62 Aligned_cols=81 Identities=22% Similarity=0.272 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC------HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN------QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~------~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
+...++++++|+++|++++|||.++.-+.. ..+-+.+...+|++.+.-..++ |..|+|-..++..+ +
T Consensus 29 dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V----~~aCaSg~~Al~~A~~~I 104 (392)
T PRK07108 29 TLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTV----NRFCSSGLQTIALAAQRV 104 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeee----cchhhHHHHHHHHHHHHH
Confidence 445588999999999999999998885442 2355667778898754322233 34455555555555 3
Q ss_pred HcCCCCCCCEEEEEeee
Q 015758 372 RSGKVKPGHTIAAAGFG 388 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~G 388 (401)
++|. .|.++..|+-
T Consensus 105 ~sG~---~d~vlagGvE 118 (392)
T PRK07108 105 IAGE---GDVFVAGGVE 118 (392)
T ss_pred HCCC---CCEEEEEEEe
Confidence 3332 3667766653
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=87.84 E-value=2.1 Score=41.12 Aligned_cols=72 Identities=15% Similarity=0.100 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCH----HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQ----RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAV 371 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~----~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l 371 (401)
+.+.....++.+++|+..++.++|||.+++-.... .+--.+.++||++++--...+ +-+||+.-.-.|.++.
T Consensus 74 e~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv---~glGCaaga~glara~ 149 (356)
T COG3424 74 EEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPV---WGLGCAAGAAGLARAR 149 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeee---ecchhhhhhhHHHHHH
Confidence 55667788999999999999999999999866543 344578999999986443223 2344554444444443
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.45 E-value=1.8 Score=44.21 Aligned_cols=80 Identities=23% Similarity=0.297 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCH-----HHH-HHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQ-----RII-DAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~-----~i~-~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
+...++++++|+++|++++|||.++..+.+. .+. ..+...+|++. +...++.. +++|-..++.++ +
T Consensus 39 eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~v~~----~~aSg~~ai~~A~~~I 113 (430)
T PRK06365 39 ERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKRIEG----GGATGGLAFQAGYEEI 113 (430)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEEEeC----CcHHHHHHHHHHHHHH
Confidence 3455888999999999999999988765431 122 23578899976 33234433 344444444443 4
Q ss_pred HcCCCCCCCEEEEEeee
Q 015758 372 RSGKVKPGHTIAAAGFG 388 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~G 388 (401)
++|. -|.||+.++-
T Consensus 114 ~sG~---~~~vLv~G~e 127 (430)
T PRK06365 114 ASGR---MDCVAVYGFE 127 (430)
T ss_pred HcCC---CCEEEEEEee
Confidence 4442 2677776664
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=87.27 E-value=1.7 Score=43.71 Aligned_cols=83 Identities=23% Similarity=0.262 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGH 380 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd 380 (401)
+.+.++++++|+++|++.+|||.++........-..+.+.+|+..-+...++..-|.++++.+-. -..++++|. -|
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~~v~~gg~sg~~~~~~-A~~~I~sG~---~d 101 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGELKFFSRIHYGGGAACATVQQ-AAMAVATGV---AD 101 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCCCcceeeecCCcHHHHHHHHH-HHHHHHCCC---CC
Confidence 44568888999999999999998875222111113477889996533333444445555433222 234455553 27
Q ss_pred EEEEEee
Q 015758 381 TIAAAGF 387 (401)
Q Consensus 381 ~ill~~~ 387 (401)
.+|+++.
T Consensus 102 ~vLv~g~ 108 (386)
T PRK07855 102 VVVCYRA 108 (386)
T ss_pred EEEEEee
Confidence 7887665
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=87.00 E-value=2.1 Score=41.31 Aligned_cols=79 Identities=22% Similarity=0.234 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc-----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA-----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~-----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++.-.. .......+.+.+|++ ......+. .+|++...+|..+ ++
T Consensus 50 ~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~----~~C~s~~~al~~A~~~i~ 124 (324)
T cd00827 50 TMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK----QACYGGTAALQLAANLVE 124 (324)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh----hhhHHHHHHHHHHHHHHH
Confidence 34558889999999999999999986332 223556688899987 22112222 3455555555444 33
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+| ..+++++++.
T Consensus 125 ~g---~~~~vlvv~~ 136 (324)
T cd00827 125 SG---PWRYALVVAS 136 (324)
T ss_pred cC---CCCEEEEEEE
Confidence 33 2367776654
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=86.85 E-value=2.4 Score=43.49 Aligned_cols=80 Identities=16% Similarity=0.169 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC------HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHH---HHH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN------QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALD---EAV 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~------~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~---~~l 371 (401)
+...++++++|+++|++++|||.++.-+.. ......+...+|++......++.. .|+|-..++. ..+
T Consensus 73 eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~----~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 73 DLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNR----QCSSGLQAVADVAAAI 148 (452)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEec----cCchHHHHHHHHHHHH
Confidence 345688999999999999999998864331 123345667789876433234533 3334333333 344
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
++|. .|.+|+.|+
T Consensus 149 ~sG~---~dvvLv~Gv 161 (452)
T PLN02287 149 KAGF---YDIGIGAGV 161 (452)
T ss_pred HcCC---CCeEEEEeE
Confidence 4553 467777554
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.68 E-value=1.8 Score=43.34 Aligned_cols=79 Identities=22% Similarity=0.174 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCH-----HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHc
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQ-----RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRS 373 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~-----~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~ 373 (401)
...++++++|+++|++++|||.++..+... ..-..+.+.+|++.. ...++ |..|++-..+|..+ +++
T Consensus 24 La~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~-~~~~v----~~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 24 LAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGK-VPLRV----EAMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCC-CeeEE----eccCHHHHHHHHHHHHHHHC
Confidence 345888999999999999999998765432 122457788998762 22233 34555555555544 444
Q ss_pred CCCCCCCEEEEEeee
Q 015758 374 GKVKPGHTIAAAGFG 388 (401)
Q Consensus 374 g~~~~Gd~ill~~~G 388 (401)
|. -|.+|++++.
T Consensus 99 G~---~~~vLvvg~e 110 (385)
T PRK12578 99 GL---VDMAIAVGVD 110 (385)
T ss_pred CC---CCEEEEEEEe
Confidence 42 3677777654
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.65 E-value=2.4 Score=42.85 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc------CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA------NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~------~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
+...++++++|+++|++++|||.+++-+. +..+.+.+...+|+|.+.-..++.+ .|+|-..++..+ +
T Consensus 28 eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~----~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 28 DLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNR----LCASGLAAVIDAARAI 103 (401)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeec----hhhhHHHHHHHHHHHH
Confidence 44568899999999999999999988554 2334455777889886544345544 333333333333 4
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
+.|. .|.++..|+
T Consensus 104 ~sG~---~dvvlagG~ 116 (401)
T PRK08131 104 TCGE---GDLYLAGGV 116 (401)
T ss_pred HCCC---CCEEEEEEe
Confidence 4443 356666554
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=86.57 E-value=1.8 Score=42.85 Aligned_cols=66 Identities=12% Similarity=0.145 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA 370 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~ 370 (401)
+...++.+++|+++|++++|||.+++...+ +..--.+.++||++++-.. + ++ +.+|++...+|..+
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~--~-di-~~~C~g~~~aL~~A 132 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIA--F-DL-GQACAGYLYGLFVA 132 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceE--E-eh-hhhhHHHHHHHHHH
Confidence 345588999999999999999999876655 3445568889998753221 2 33 44677777766444
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=86.48 E-value=3.5 Score=39.87 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCch-HHHHHHHcCCCCCCeeE----eeC-ccChHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAY----DIT-AACSGFLLGLVSAACH 190 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~-a~~i~~~lGl~~~~~~~----~i~-~~C~~~~~aL~~A~~~ 190 (401)
.+...++++++|+++|+.++|||+++............ ...+....+.+ ..+.. .+. .++++.+..|..+...
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDK-SPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCC-CceeECCCcccccchhHhHHHHHHHHHHH
Confidence 45566899999999999999999998765433222221 22222333321 11211 233 5677788888888777
Q ss_pred HHcC
Q 015758 191 IRGG 194 (401)
Q Consensus 191 l~~g 194 (401)
++.+
T Consensus 283 ~~~~ 286 (332)
T cd00825 283 LEHG 286 (332)
T ss_pred HhcC
Confidence 7665
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.15 E-value=2.9 Score=42.11 Aligned_cols=81 Identities=22% Similarity=0.202 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc-----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA-----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~-----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.+++-+. +..+.......+|+|.+.-..++. ..|+|-..++..+ ++
T Consensus 33 eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~----~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 33 QLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN----KMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc----ccchHHHHHHHHHHHHHH
Confidence 44568899999999999999999887532 223333444456776543333442 3444544444444 44
Q ss_pred cCCCCCCCEEEEEeee
Q 015758 373 SGKVKPGHTIAAAGFG 388 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~G 388 (401)
+|. .|.+++.++-
T Consensus 109 sG~---~d~vLv~G~E 121 (397)
T PRK06954 109 AGS---VDVIVAGGME 121 (397)
T ss_pred CCC---CCEEEEEeee
Confidence 443 3667766553
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.15 E-value=2.3 Score=43.28 Aligned_cols=80 Identities=23% Similarity=0.210 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++..+.. ..+-..+...+|++.+....++.. .|+|-..++..+ ++
T Consensus 29 ~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~----~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 29 DLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR----NCASGMQALDSAAANIA 104 (426)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc----hhhHHHHHHHHHHHHHH
Confidence 345588999999999999999998875432 122345778899975443333432 244545555444 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. .|.+|+.++
T Consensus 105 sG~---~d~vLv~G~ 116 (426)
T PRK08170 105 LGR---ADLVLAGGV 116 (426)
T ss_pred CCC---CCEEEEEEE
Confidence 443 366776554
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=85.91 E-value=1.1 Score=43.87 Aligned_cols=82 Identities=22% Similarity=0.246 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHH
Q 015758 115 SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACH 190 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~ 190 (401)
....+..++.+++|++++++++|||+++.... ....-..++++||++.+....++. ++-++--.+|..+
T Consensus 220 ~av~~~~~~~~~~L~~~~l~~~dId~~vpHQa----n~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~--- 292 (323)
T COG0332 220 FAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA----NLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEA--- 292 (323)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEccccc----cHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHH---
Confidence 36788889999999999999999999995321 112356789999997655555663 3334444444443
Q ss_pred HHcCC---CCeEEEEE
Q 015758 191 IRGGG---FRNVLVIG 203 (401)
Q Consensus 191 l~~g~---~~~vLvv~ 203 (401)
++.|+ .+++|+.+
T Consensus 293 ~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 293 LREGRIKPGDLVLLEA 308 (323)
T ss_pred hhhCCCCCCCEEEEEe
Confidence 34443 35566554
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.86 E-value=2.7 Score=42.23 Aligned_cols=80 Identities=24% Similarity=0.303 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc-----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA-----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~-----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++..+. +......+...+|++......++. .+|++-..++..+ ++
T Consensus 28 ~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~----~~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 28 ELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN----KVCGSGLKAVALAAQAIR 103 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec----ccchHHHHHHHHHHHHHH
Confidence 34558899999999999999999887431 222233355567776533222232 2555555555544 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. -|.+|+.++
T Consensus 104 sG~---~d~vLv~G~ 115 (393)
T PRK05790 104 AGD---ADIVVAGGQ 115 (393)
T ss_pred cCC---CCEEEEEee
Confidence 443 267776554
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=85.84 E-value=2.7 Score=42.50 Aligned_cols=82 Identities=17% Similarity=0.139 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCH------HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQ------RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~------~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
...++++++|+++|++++|||.++..+... .+.+.....+|++.+.-..++ |..|+|-..++..+...=+
T Consensus 31 La~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~V----n~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 31 LAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQI----NRFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEE----cchhhhHHHHHHHHHHHHH
Confidence 445788999999999999999999866542 345556677898753322344 4456666666655533211
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
.-..|.+|+.|+
T Consensus 107 sG~~d~vLv~G~ 118 (402)
T PRK08242 107 SGWDDLVIAGGV 118 (402)
T ss_pred cCCCCEEEEEEE
Confidence 112366776664
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=85.53 E-value=2.9 Score=42.12 Aligned_cols=82 Identities=15% Similarity=0.242 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc-----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA-----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~-----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
+...++++++|+++|++++|||.++.-+. +..+...+...+|++...-..++...|.++... ...-..++++|.
T Consensus 27 ~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~~caSg~~a-v~~Aa~~I~sG~ 105 (394)
T PLN02644 27 ELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKA-VMLAAQSIQLGI 105 (394)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEeccchHHHHH-HHHHHHHHHcCC
Confidence 45568999999999999999999987331 233344577889996543223453333333222 222234455553
Q ss_pred CCCCCEEEEEe
Q 015758 376 VKPGHTIAAAG 386 (401)
Q Consensus 376 ~~~Gd~ill~~ 386 (401)
.|.+|..+
T Consensus 106 ---~d~vlv~G 113 (394)
T PLN02644 106 ---NDVVVAGG 113 (394)
T ss_pred ---CCEEEEEe
Confidence 35666544
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=85.26 E-value=2.8 Score=42.22 Aligned_cols=80 Identities=18% Similarity=0.187 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCH------HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQ------RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~------~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
+...++++++|+++|++++|||.++..+... ..-..+...+|++.+.-..++. ..|+|-..++..+ +
T Consensus 29 eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~----~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 29 DLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN----RLCGSGLQAIVSAAQAI 104 (394)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec----ccchHHHHHHHHHHHHH
Confidence 3445889999999999999999998864321 2334455677887543323342 3444544544444 4
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
++|. -|.+|+.++
T Consensus 105 ~sG~---~d~vLvvG~ 117 (394)
T PRK09051 105 LLGD---ADVAIGGGA 117 (394)
T ss_pred HcCC---CCEEEEEee
Confidence 4443 367777655
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=84.94 E-value=2.7 Score=43.65 Aligned_cols=79 Identities=22% Similarity=0.263 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHH-HHHHHcCCCCC-CeeEeeCcc--------ChHHHHHHHHHHH
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGAT-QIPKALGCKNN-PLAYDITAA--------CSGFLLGLVSAAC 189 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~-~i~~~lGl~~~-~~~~~i~~~--------C~~~~~aL~~A~~ 189 (401)
...|++++++++|++++|||++=+..+ |+... ...+.||+.++ ...++++.| .++++..+..+..
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydc-----F~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~ 368 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSC-----FPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVE 368 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccC-----CHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHH
Confidence 346999999999999999999976443 33333 34578998533 123444322 2335666666777
Q ss_pred HHHcCCCCeEEEEE
Q 015758 190 HIRGGGFRNVLVIG 203 (401)
Q Consensus 190 ~l~~g~~~~vLvv~ 203 (401)
.|+....++.|+.+
T Consensus 369 QLRg~~~~~gLv~~ 382 (498)
T PRK08257 369 RLRANPGRRGLVTA 382 (498)
T ss_pred HHhhcCCCEEEEEC
Confidence 77755566676655
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.88 E-value=2.8 Score=42.14 Aligned_cols=83 Identities=16% Similarity=0.204 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
+...++++++|+++|++++|||.+++-+.. ..+.+.+...+|++.+.-..++.+.+-.|..++-.+. ..+++|.
T Consensus 29 ~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~-~~I~sG~ 107 (392)
T PRK06633 29 MLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAA-NSIMTGD 107 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHH-HHHHcCC
Confidence 345688999999999999999999986542 3455667788999865433456444444443333332 3344442
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
.|.++..|+
T Consensus 108 ---~dvvla~G~ 116 (392)
T PRK06633 108 ---NEIVIAGGQ 116 (392)
T ss_pred ---CCEEEEccc
Confidence 355555443
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=84.70 E-value=2.8 Score=41.98 Aligned_cols=78 Identities=22% Similarity=0.229 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCHHH-HHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRI-IDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPG 379 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i-~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~G 379 (401)
+...++++++|+++|++++|||.++..+..... ...+.+.||++... . ..-+.++++...+|..+.. .++.|
T Consensus 30 eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~-~----~~~~~g~~s~~~al~~A~~--~I~sG 102 (384)
T PRK06158 30 ELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRF-V----DGTMIGGSSFLAHLLPAAL--ALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCee-e----ccccCccHHHHHHHHHHHH--HHHcC
Confidence 345588899999999999999998875432111 13478889986522 1 1224556666665655543 23333
Q ss_pred --CEEEEE
Q 015758 380 --HTIAAA 385 (401)
Q Consensus 380 --d~ill~ 385 (401)
|.+|++
T Consensus 103 ~~d~vLV~ 110 (384)
T PRK06158 103 LCDVALIC 110 (384)
T ss_pred CCCEEEEe
Confidence 666654
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=84.51 E-value=3 Score=42.01 Aligned_cols=80 Identities=21% Similarity=0.204 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++.-+.. ......+.+.+|++. +...++.. ++++-..++..+ ++
T Consensus 29 ~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~-~~~~~v~~----~c~sg~~ai~~A~~~I~ 103 (398)
T PRK06157 29 DLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPN-IPVTRVEN----FCATGSEAFRGAVYAVA 103 (398)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCC-CCEEEEec----ccHHHHHHHHHHHHHHH
Confidence 445689999999999999999988764421 112245777899974 32233433 333433444433 44
Q ss_pred cCCCCCCCEEEEEeee
Q 015758 373 SGKVKPGHTIAAAGFG 388 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~G 388 (401)
+|. .|.+++.++.
T Consensus 104 sG~---~d~vlv~G~e 116 (398)
T PRK06157 104 SGA---YDIALALGVE 116 (398)
T ss_pred CCC---CCEEEEEEEe
Confidence 442 3677777764
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=84.26 E-value=3.5 Score=40.10 Aligned_cols=76 Identities=26% Similarity=0.368 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-HH-HHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-QR-IIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-~~-i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~g~ 375 (401)
+...++++++|+++|++++|||.++..... .. .-..+++.||+|. +.-++ .|++...+|..+ +++|
T Consensus 52 eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP~------fdV~~--ACSTf~~AL~lAa~lI~SG- 122 (327)
T TIGR02845 52 KLMEDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIPF------LGLYG--ACSTSMETLALGAMLVDGG- 122 (327)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCCE------EEEec--cCHHHHHHHHHHHHHHhCC-
Confidence 345688999999999999999999875421 11 1234667888743 33333 344444444443 4443
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
..+++|+++.
T Consensus 123 --~ad~VLVV~S 132 (327)
T TIGR02845 123 --FADRVLAATS 132 (327)
T ss_pred --CCCEEEEEEe
Confidence 2477777763
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.98 E-value=2.9 Score=41.99 Aligned_cols=80 Identities=19% Similarity=0.246 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEec-ccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHcCCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLH-QANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRSGKV 376 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~H-q~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~g~~ 376 (401)
+.+.+++.++|+++|++++|||.++.. .........+.+.+|+.. +...+. +.++++...++.++ +++|.
T Consensus 27 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~-~~~~~v----~~gg~s~~~a~~~A~~~I~sG~- 100 (388)
T PRK08142 27 QLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKL-RHVDST----ETGGSSYLAHVGHAAQAIAAGK- 100 (388)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCC-eeeccc----cCCcHHHHHHHHHHHHHHHcCC-
Confidence 455688889999999999999987752 111111124888999964 222233 23444444444444 44443
Q ss_pred CCCCEEEEEeee
Q 015758 377 KPGHTIAAAGFG 388 (401)
Q Consensus 377 ~~Gd~ill~~~G 388 (401)
-|.+|++++.
T Consensus 101 --~d~vLvvg~e 110 (388)
T PRK08142 101 --CSVALITLAG 110 (388)
T ss_pred --CCEEEEEeee
Confidence 2677776654
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=83.22 E-value=5.6 Score=33.15 Aligned_cols=74 Identities=28% Similarity=0.299 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEee---------CccChHHHHHHHHHHH
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDI---------TAACSGFLLGLVSAAC 189 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i---------~~~C~~~~~aL~~A~~ 189 (401)
...|++++|+++|++++|||.+=+. +.| ...-...+.||+.. ..+++ -.||+|...-++++.+
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~-----EaFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~ 96 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEIN-----EAFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQ 96 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE-------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhcc-----chhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHH
Confidence 4689999999999999999998653 233 23456677788842 22222 2477887777777777
Q ss_pred HHHcCCCCeEEE
Q 015758 190 HIRGGGFRNVLV 201 (401)
Q Consensus 190 ~l~~g~~~~vLv 201 (401)
+-+.+ .++.|+
T Consensus 97 L~~~~-~~~gla 107 (123)
T PF02803_consen 97 LRRRG-GRYGLA 107 (123)
T ss_dssp HHHHT-TSEEEE
T ss_pred HHHhc-hhhhhH
Confidence 76654 455544
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.07 E-value=3.7 Score=41.15 Aligned_cols=43 Identities=28% Similarity=0.216 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCc-hHHHHHHHcCCC
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFG-GATQIPKALGCK 165 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~-~a~~i~~~lGl~ 165 (401)
.-...|++++++++|++|+|||++-+. +.++ ..-...+.||+.
T Consensus 260 ~~~~~a~~~a~~~agl~~~did~~e~~-----d~f~~~~~~~~e~lg~~ 303 (389)
T PRK07516 260 EGPRRAWQRALAQAGVTLDDLSFVETH-----DCFTIAELIEYEAMGLA 303 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEe-----cCCCHHHHHHHHHcCCC
Confidence 334579999999999999999998653 2222 234455667763
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=82.95 E-value=2 Score=43.47 Aligned_cols=46 Identities=33% Similarity=0.385 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEE-EEecCCCCCCchHHHHHHHcC
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVL-MCTSTPEDLFGGATQIPKALG 163 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li-~~t~~~~~~~~~a~~i~~~lG 163 (401)
+=+.+|.+.||+++|++|+|||+|- ++|+|+.....-...|.+.+|
T Consensus 276 ~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 276 EGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred chHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 3456999999999999999999996 467777543333556666677
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=82.90 E-value=4.6 Score=39.47 Aligned_cols=79 Identities=33% Similarity=0.418 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-HHH-HHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH-HHcCCCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-QRI-IDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA-VRSGKVK 377 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-~~i-~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~-l~~g~~~ 377 (401)
+...++++++|+++|++++|||.++..... ..+ -..+.+.||+| .+.-++.+++...-+.+... +++|
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIP------a~dV~gACST~~~AL~lAa~lI~SG--- 128 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIP------FLGLYGACSTMMESLALGSMLIDGG--- 128 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCc------EEEEeccCHHHHHHHHHHHHHHhcC---
Confidence 345689999999999999999999875432 122 22456778874 23344544433333333322 3333
Q ss_pred CCCEEEEEeee
Q 015758 378 PGHTIAAAGFG 388 (401)
Q Consensus 378 ~Gd~ill~~~G 388 (401)
..+++|+++.-
T Consensus 129 ~ad~VLVV~Ss 139 (337)
T PRK08304 129 FADRVLAATSS 139 (337)
T ss_pred CCCEEEEEEcc
Confidence 24777776643
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.12 E-value=5.4 Score=40.07 Aligned_cols=84 Identities=11% Similarity=0.128 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC------HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN------QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~------~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
+...++++++|+++|++++|||.+++-+.. ..+-+.+...+|++.+.-..++.+..-+|..++..+. ..+++|
T Consensus 28 eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~~CaSG~~A~~~A~-~~I~sG 106 (387)
T PRK07850 28 ELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVA-GLIAAG 106 (387)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEecccccHHHHHHHHH-HHHHCC
Confidence 445688999999999999999999885542 1233455556888864322355333333333333332 234444
Q ss_pred CCCCCCEEEEEeee
Q 015758 375 KVKPGHTIAAAGFG 388 (401)
Q Consensus 375 ~~~~Gd~ill~~~G 388 (401)
. .|.++..|+-
T Consensus 107 ~---~dvvla~G~E 117 (387)
T PRK07850 107 A---IDVGIACGVE 117 (387)
T ss_pred C---CCEEEEEeEe
Confidence 2 3666666653
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.43 E-value=5.6 Score=40.14 Aligned_cols=80 Identities=23% Similarity=0.192 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHc-CCCcCCcCEEEecccC------HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---
Q 015758 301 RVVPQTIESALEKA-GLTMSSIDWLLLHQAN------QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA--- 370 (401)
Q Consensus 301 ~~~~~~i~~aL~~a-gl~~~dId~~i~Hq~~------~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~--- 370 (401)
+...++++++|+++ |++++|||.+++-+.. ...-+.....+|++...-..++ |..|+|-..++..+
T Consensus 33 eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V----~~aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 33 DLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTV----NRFCASGLQAVAMAADR 108 (399)
T ss_pred HHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeee----cchhhHHHHHHHHHHHH
Confidence 34558899999997 9999999998875322 1222334455688743212233 23455555555444
Q ss_pred HHcCCCCCCCEEEEEee
Q 015758 371 VRSGKVKPGHTIAAAGF 387 (401)
Q Consensus 371 l~~g~~~~Gd~ill~~~ 387 (401)
+++|. .|.+|+.++
T Consensus 109 I~sG~---~d~vLv~G~ 122 (399)
T PRK09052 109 IRVGE---ADVMIAAGV 122 (399)
T ss_pred HHCCC---CCEEEEEEE
Confidence 44443 366777655
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=81.36 E-value=4.5 Score=40.13 Aligned_cols=79 Identities=22% Similarity=0.259 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCH-----HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHH---HHH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQ-----RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDE---AVR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~-----~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~---~l~ 372 (401)
+...++++++|+++|++++|||.+++..... ..-..+...+|++ .....++.. +|++....+.. .++
T Consensus 18 eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~----~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 18 ELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA----AGASGSAAVRAAAAAIA 92 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC----ccHHHHHHHHHHHHHHH
Confidence 3455888999999999999999988744322 3445688899997 222223332 34444444433 344
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
+|. -|.+++.+.
T Consensus 93 sG~---~~~vlv~g~ 104 (375)
T cd00829 93 SGL---ADVVLVVGA 104 (375)
T ss_pred hCC---CCEEEEEEE
Confidence 442 367776654
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.01 E-value=5 Score=40.27 Aligned_cols=84 Identities=21% Similarity=0.254 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-H-----HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-Q-----RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-~-----~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
+...++++++|+++|++++|||.++..+.. . ..-..+.+.||+..... ..+...+-++... +..-..++++|
T Consensus 26 eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~-~~v~~~casg~~a-l~~A~~~I~sG 103 (386)
T PRK08313 26 GLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPL-IRVHTAGSVGGST-AVVAASLVQSG 103 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCce-EEEeccCHHHHHH-HHHHHHHHHCC
Confidence 345588889999999999999998875311 0 01135778899864322 2232222223222 22223345544
Q ss_pred CCCCCCEEEEEeeeh
Q 015758 375 KVKPGHTIAAAGFGA 389 (401)
Q Consensus 375 ~~~~Gd~ill~~~G~ 389 (401)
. -|.+|++++..
T Consensus 104 ~---~~~vLVvg~e~ 115 (386)
T PRK08313 104 V---YRRVLAVAWEK 115 (386)
T ss_pred C---CCEEEEEEEEE
Confidence 2 37888887653
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=80.79 E-value=1.1 Score=36.93 Aligned_cols=78 Identities=26% Similarity=0.273 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEE-ecCCCCCCchHHHHHHHcCCCC---CCeeEee----C-ccChHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMC-TSTPEDLFGGATQIPKALGCKN---NPLAYDI----T-AACSGFLLGLVSA 187 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~-t~~~~~~~~~a~~i~~~lGl~~---~~~~~~i----~-~~C~~~~~aL~~A 187 (401)
.+-..++.+++|+++|++|+|||+|... +.++.....-+.-+.+.++-.. ..+.-.+ . ...++++..|..+
T Consensus 24 ~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 24 GAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHH
Confidence 3344788999999999999999999753 3333211112445566565421 1333333 2 4677888888888
Q ss_pred HHHHHcC
Q 015758 188 ACHIRGG 194 (401)
Q Consensus 188 ~~~l~~g 194 (401)
...++.+
T Consensus 104 ~l~l~~~ 110 (119)
T PF02801_consen 104 LLALEHG 110 (119)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 8877765
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=80.49 E-value=5.5 Score=40.11 Aligned_cols=80 Identities=19% Similarity=0.100 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc------CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA------NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~------~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
+...++++++|+++|++++|||.++..+. +...-..+.+.+|+..-... ++ |.+|++-..+|..+ +
T Consensus 25 ~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~-~v----~~~Casg~~al~~A~~~I 99 (399)
T PRK06059 25 EYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVS-SS----YAACASGSQALQSARAQI 99 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCcee-cc----cchhHHHHHHHHHHHHHH
Confidence 34558889999999999999999885321 11222567888998542221 22 33455544555444 4
Q ss_pred HcCCCCCCCEEEEEeee
Q 015758 372 RSGKVKPGHTIAAAGFG 388 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~G 388 (401)
++|. -|.+|+++.-
T Consensus 100 ~sG~---~~~vLvvg~e 113 (399)
T PRK06059 100 LAGL---CDVALVVGAD 113 (399)
T ss_pred HCCC---CCEEEEEEEc
Confidence 4442 3667766543
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=80.27 E-value=5.8 Score=40.41 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
+...++++++|+++|+++++||.+++-+.. ..+.+.+...+|++..+-..++.+.+-+|..++..+. ..+++|.
T Consensus 31 eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~aCaSG~~Ai~~Aa-~~I~sG~ 109 (428)
T PRK08963 31 DLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVA-ESIMAGT 109 (428)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehhhhHHHHHHHHHHH-HHHHCCC
Confidence 345688999999999999999999875432 3344457778898854433455443333333333332 3344443
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
.|.++..|+
T Consensus 110 ---~dvvLvgG~ 118 (428)
T PRK08963 110 ---IDIGIAGGA 118 (428)
T ss_pred ---CCEEEEecc
Confidence 355555443
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=80.11 E-value=3.6 Score=43.20 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEE-EEecCCCCCCchHHHHHHHcCCCCCCeeEee----C-ccChHHHHHHHHHHHHHHc
Q 015758 120 AVEAASRALQMAEVNPEDVDLVL-MCTSTPEDLFGGATQIPKALGCKNNPLAYDI----T-AACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li-~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~-~~C~~~~~aL~~A~~~l~~ 193 (401)
..++.++||+++|++|+|||+|- ++|.|+.....-...|.+.+|-....+.-.+ . .-.+++...+..+...|+.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~ 486 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRT 486 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhc
Confidence 45899999999999999999985 4666664322235566777774222222222 2 2344455555555666666
Q ss_pred C
Q 015758 194 G 194 (401)
Q Consensus 194 g 194 (401)
|
T Consensus 487 g 487 (540)
T PLN02787 487 G 487 (540)
T ss_pred C
Confidence 5
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 401 | ||||
| 2ebd_A | 309 | Crystal Structure Of 3-oxoacyl-[acyl-carrier-protei | 5e-69 | ||
| 4dfe_A | 333 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 3e-66 | ||
| 1hn9_A | 317 | Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii | 8e-66 | ||
| 1mzs_A | 317 | Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii | 1e-64 | ||
| 3il9_A | 340 | Structure Of E. Coli Fabh Length = 340 | 1e-64 | ||
| 3il3_A | 323 | Structure Of Haemophilus Influenzae Fabh Length = 3 | 7e-63 | ||
| 1zow_A | 313 | Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl | 9e-63 | ||
| 1ebl_A | 317 | The 1.8 A Crystal Structure And Active Site Archite | 7e-62 | ||
| 1hnh_A | 317 | Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii | 1e-61 | ||
| 1ub7_A | 322 | The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier | 6e-58 | ||
| 3il5_A | 343 | Structure Of E. Faecalis Fabh In Complex With 2-({4 | 3e-54 | ||
| 3il4_A | 320 | Structure Of E. Faecalis Fabh In Complex With Acety | 6e-54 | ||
| 3il6_A | 321 | Structure Of E. Faecalis Fabh In Complex With 2-({4 | 3e-51 | ||
| 2x3e_A | 331 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 5e-50 | ||
| 1mzj_A | 339 | Crystal Structure Of The Priming Beta-Ketosynthase | 1e-47 | ||
| 3h76_A | 359 | Crystal Structure Of Pqsd, A Key Enzyme In Pseudomo | 1e-44 | ||
| 4ewp_A | 350 | Crystal Structure Of Fabh From Micrococcus Luteus L | 5e-44 | ||
| 3h78_A | 359 | Crystal Structure Of Pseudomonas Aeruginosa Pqsd C1 | 1e-43 | ||
| 3h77_A | 359 | Crystal Structure Of Pseudomonas Aeruginosa Pqsd In | 3e-43 | ||
| 1hzp_A | 335 | Crystal Structure Of The Myobacterium Tuberculosis | 4e-42 | ||
| 1m1m_A | 355 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 4e-42 | ||
| 2qny_A | 335 | Crystal Structure Of The Complex Between The A246f | 2e-41 | ||
| 1u6s_A | 335 | Crystal Structure Of The Complex Between Mycobacter | 5e-41 | ||
| 2ahb_A | 356 | X-Ray Crystal Structure Of R46a,R161a Mutant Of Myc | 2e-40 | ||
| 2aj9_A | 356 | X-Ray Crystal Structure Of W42a,R161a Double Mutant | 1e-39 | ||
| 3gwa_A | 365 | 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-C | 5e-36 | ||
| 4efi_A | 354 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 7e-34 | ||
| 3led_A | 392 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-11 | ||
| 3s21_A | 345 | Crystal Structure Of Cerulenin Bound Xanthomonas Ca | 2e-08 | ||
| 3row_A | 344 | Crystal Structure Of Xanthomonas Campestri Olea Len | 2e-08 | ||
| 3fk5_A | 338 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-07 | ||
| 1u0m_A | 382 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 6e-04 |
| >pdb|2EBD|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl-carrier-protein] Synthase Iii From Aquifex Aeolicus Vf5 Length = 309 | Back alignment and structure |
|
| >pdb|4DFE|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Iii From Burkholderia Xenovorans Length = 333 | Back alignment and structure |
|
| >pdb|1HN9|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii Length = 317 | Back alignment and structure |
|
| >pdb|1MZS|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii With Bound Dichlorobenzyloxy-Indole-Carboxylic Acid Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3IL9|A Chain A, Structure Of E. Coli Fabh Length = 340 | Back alignment and structure |
|
| >pdb|3IL3|A Chain A, Structure Of Haemophilus Influenzae Fabh Length = 323 | Back alignment and structure |
|
| >pdb|1ZOW|A Chain A, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier Protein Synthase Iii Length = 313 | Back alignment and structure |
|
| >pdb|1EBL|A Chain A, The 1.8 A Crystal Structure And Active Site Architecture Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii (Fabh) From Escherichia Coli Length = 317 | Back alignment and structure |
|
| >pdb|1HNH|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii + Degraded Form Of Acetyl-Coa Length = 317 | Back alignment and structure |
|
| >pdb|1UB7|A Chain A, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier Protein] Synthase Iii (Fabh)from Thermus Thermophilus. Length = 322 | Back alignment and structure |
|
| >pdb|3IL5|A Chain A, Structure Of E. Faecalis Fabh In Complex With 2-({4-Bromo-3- [(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid Length = 343 | Back alignment and structure |
|
| >pdb|3IL4|A Chain A, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa Length = 320 | Back alignment and structure |
|
| >pdb|3IL6|A Chain A, Structure Of E. Faecalis Fabh In Complex With 2-({4-[(3r, 5s)-3,5-Dimethylpiperidin-1-Yl]-3-Phenoxybenzoyl}amino) Benzoic Acid Length = 321 | Back alignment and structure |
|
| >pdb|2X3E|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Iii, Fabh From Pseudomonas Aeruginosa Pao1 Length = 331 | Back alignment and structure |
|
| >pdb|1MZJ|A Chain A, Crystal Structure Of The Priming Beta-Ketosynthase From The R1128 Polyketide Biosynthetic Pathway Length = 339 | Back alignment and structure |
|
| >pdb|3H76|A Chain A, Crystal Structure Of Pqsd, A Key Enzyme In Pseudomonas Aeruginosa Quinolone Signal Biosynthesis Pathway Length = 359 | Back alignment and structure |
|
| >pdb|4EWP|A Chain A, Crystal Structure Of Fabh From Micrococcus Luteus Length = 350 | Back alignment and structure |
|
| >pdb|3H78|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd C112a Mutant In Complex With Anthranilic Acid Length = 359 | Back alignment and structure |
|
| >pdb|3H77|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A Covalent Complex With Anthranilate Length = 359 | Back alignment and structure |
|
| >pdb|1HZP|A Chain A, Crystal Structure Of The Myobacterium Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii Length = 335 | Back alignment and structure |
|
| >pdb|1M1M|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii (Mtfabh) Length = 355 | Back alignment and structure |
|
| >pdb|2QNY|A Chain A, Crystal Structure Of The Complex Between The A246f Mutant Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii (Fabh) And Ss-(2-Hydroxyethyl) O-Decyl Ester Carbono(Dithioperoxoic) Acid Length = 335 | Back alignment and structure |
|
| >pdb|1U6S|A Chain A, Crystal Structure Of The Complex Between Mycobacterium Tuberculosis Beta-ketoacyl-acyl Carrier Protein Synthase Iii And Lauroyl Coenzyme A Length = 335 | Back alignment and structure |
|
| >pdb|2AHB|A Chain A, X-Ray Crystal Structure Of R46a,R161a Mutant Of Mycobacterium Tuberculosis Fabh Length = 356 | Back alignment and structure |
|
| >pdb|2AJ9|A Chain A, X-Ray Crystal Structure Of W42a,R161a Double Mutant Of Mycobacterium Tuberculosis Beta-Ketoacyl-Acp Synthase Iii Length = 356 | Back alignment and structure |
|
| >pdb|3GWA|A Chain A, 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii Length = 365 | Back alignment and structure |
|
| >pdb|4EFI|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase From Burkholderia Xenovorans Lb400 Length = 354 | Back alignment and structure |
|
| >pdb|3LED|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Iii From Rhodopseudomonas Palustris Cga009 Length = 392 | Back alignment and structure |
|
| >pdb|3S21|A Chain A, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri Olea (Co- Crystal) Length = 345 | Back alignment and structure |
|
| >pdb|3ROW|A Chain A, Crystal Structure Of Xanthomonas Campestri Olea Length = 344 | Back alignment and structure |
|
| >pdb|3FK5|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Iii, Fabh (Xoo4209) From Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 338 | Back alignment and structure |
|
| >pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 | Back alignment and structure |
|---|
Score = 510 bits (1316), Expect = 0.0
Identities = 99/356 (27%), Positives = 163/356 (45%), Gaps = 2/356 (0%)
Query: 47 AGSEKSVSSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIV-DTSDEWISVRTGIR 105
E S P + +P ++ND LA++ D E I +TGIR
Sbjct: 10 GTLEAQTQGPGSMTPAAHPPRAAIADIAGHLPEQVLTNDVLAQLYPDWPAEKILAKTGIR 69
Query: 106 NRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGC 164
RR+ + +E+ LA EAA + V + VD V++CT P+ + A + LG
Sbjct: 70 ERRIAAPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGI 129
Query: 165 KNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224
+ A D+ CSG++ GL A + G R VL++ D S++ D+ LFGD
Sbjct: 130 PTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLHPLDKSVRTLFGD 189
Query: 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYS 284
A A V A E + + F +DG G +L + + S +
Sbjct: 190 GASATAVIAEHGELERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRT 249
Query: 285 YSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVP 344
+YMNG EV F++ VP+ + L AG +ID +LHQAN+ ++DA+ ++ +P
Sbjct: 250 DEHLYMNGAEVMAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANRFMLDALRKKMKIP 309
Query: 345 MERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
+ + + GNT ++++PLAL+ +G + G + GFG G +W ++ +
Sbjct: 310 EHKFPVLMEHCGNTVSSTLPLALETMRANGTLARGMRLMLLGFGVGYSWAGCLVNF 365
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 | Back alignment and structure |
|---|
Score = 506 bits (1305), Expect = 0.0
Identities = 102/350 (29%), Positives = 155/350 (44%), Gaps = 10/350 (2%)
Query: 54 SSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSD-EWISVRTGIRNRRVLSG 112
S S L +G ++ G S VP+ Q+ ND + D S + G+ RR
Sbjct: 3 SPDFSAGRELRTQGARIAGVVSCVPSKQVDNDYFVERFDASAVRDVVKMIGVNRRRWADA 62
Query: 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAY 171
+ S L +A + L + +D ++ + TP A + L + LA
Sbjct: 63 QTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLAL 122
Query: 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLV 231
DI CSG+ L I+ G + VL+ GD +S+ D TDR + +LFGDA +
Sbjct: 123 DINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMIDPTDRSTSLLFGDAGTMTAL 182
Query: 232 QACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMN 291
+ S D F + +DG+G R+L G + DA ++M+
Sbjct: 183 ET--SNGDAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGK--SPEC----LFMD 234
Query: 292 GKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN 351
G E+F F + VP+ + L+ AG S D L HQAN ++ +A + +P ERV N
Sbjct: 235 GGEIFNFTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLFMLKHLAKKAGLPAERVPVN 294
Query: 352 LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
+ YGNTS ASIPL + ++ + + GFG G +W SA L G
Sbjct: 295 IGEYGNTSCASIPLLITTELKDRLKEETLQLGMFGFGVGYSWASAALAVG 344
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 | Back alignment and structure |
|---|
Score = 487 bits (1256), Expect = e-174
Identities = 130/341 (38%), Positives = 201/341 (58%), Gaps = 23/341 (6%)
Query: 66 RGCKLVGCGSAVPTLQISNDDLA-----KIVDTSDEWISVRTGIRNRRVLSGKESLTGLA 120
+++G GS +P +++N DLA + ++TSDEWI RTGI R + + LA
Sbjct: 10 IYSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETSDEWIVARTGIHARYFAEPDVTTSDLA 69
Query: 121 VEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSG 179
A+ RA++ A+++P+ +DL+++ TSTP+ +F A + LG +N+ A+D+ A CSG
Sbjct: 70 FIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSG 129
Query: 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDD 239
F + +A IR G R LVIG + SR D+ DR +C+LFGD AGAV++QA S++
Sbjct: 130 FAYAVATADSFIRSGQHRTALVIGAETFSRILDFKDRTTCVLFGDGAGAVILQA--SDEP 187
Query: 240 GLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFA 299
G+++ +H+DG L N + + ++M+G+ VF+ A
Sbjct: 188 GVLASALHADGSHSNILC-----------TPGNVNGGVVSGSAF----LHMDGQAVFKLA 232
Query: 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTS 359
V V+ + ALEKA L+ IDWL+ HQAN RI+ + +L +P ER+I + +GNTS
Sbjct: 233 VNVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVTVGEHGNTS 292
Query: 360 AASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
AASIPLALD AVR G++K G + G G G TWG++++R+
Sbjct: 293 AASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASVIRY 333
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 | Back alignment and structure |
|---|
Score = 480 bits (1237), Expect = e-171
Identities = 135/333 (40%), Positives = 196/333 (58%), Gaps = 20/333 (6%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
K++G GS +P +N DL K+VDTSDEWI RTGIR R + + E+++ + EAA+RA+
Sbjct: 4 KIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAI 63
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187
+MA + + + L+++ T++ F A QI LG K P A+D+ AAC+GF L A
Sbjct: 64 EMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP-AFDVAAACAGFTYALSVA 122
Query: 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVH 247
+++ G + LV+G D L+R D TDRG+ I+FGD AGA ++ A SE+ G+IS +H
Sbjct: 123 DQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAA--SEEPGIISTHLH 180
Query: 248 SDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307
+DG G L P++ + + M G EVF+ AV + +
Sbjct: 181 ADGSYGELLTL--------PNADRVN------PENSIH--LTMAGNEVFKVAVTELAHIV 224
Query: 308 ESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLAL 367
+ L L S +DWL+ HQAN RII A A +L + M+ V+ L +GNTSAAS+P AL
Sbjct: 225 DETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCAL 284
Query: 368 DEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
DEAVR G++KPG + FG G TWGSA++R+
Sbjct: 285 DEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 317
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 | Back alignment and structure |
|---|
Score = 479 bits (1236), Expect = e-171
Identities = 134/339 (39%), Positives = 185/339 (54%), Gaps = 19/339 (5%)
Query: 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAA 124
R + G GS +P +SND LA +DTSD WIS RTG+R R + LA+ AA
Sbjct: 3 PRAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQRHIAGD-LGSGDLALRAA 61
Query: 125 SRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLG 183
S AL A E VD V++ TST + A ++ LG A+D++AA +GF+ G
Sbjct: 62 SAALASA--GLERVDAVVLATSTGDFCCPATAPRVAARLGLVGAL-AFDLSAAATGFVYG 118
Query: 184 LVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDD-GLI 242
L S I G + L++G D S D DR + LFGD AGAV+++A D+E++ L+
Sbjct: 119 LASVGSLISAGLADSALLVGVDTFSHTLDPADRSTRALFGDGAGAVVLRAGDAEEEGALL 178
Query: 243 SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302
+FD+ SDG L A+ +Y M+GK VF AV
Sbjct: 179 AFDLGSDGHQFDLLMT--------PAVSRAERSSG-QASNY----FRMDGKAVFGQAVTQ 225
Query: 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAAS 362
+ ++ L++ G S + L+ HQAN RI+ AVA++LD+P+ERV+SN+A GNT AAS
Sbjct: 226 MSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAAS 285
Query: 363 IPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
IPLAL +R G ++ G + GFGAGLTWGS LRW
Sbjct: 286 IPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWP 324
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 | Back alignment and structure |
|---|
Score = 476 bits (1227), Expect = e-169
Identities = 124/333 (37%), Positives = 191/333 (57%), Gaps = 21/333 (6%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
+++ GS +P+ +N DL K+VDTSDEWI R+GIR RR+ + E++ + EAA A+
Sbjct: 11 RILSTGSYLPSHIRTNADLEKMVDTSDEWIVTRSGIRERRIAAEDETVATMGFEAAKNAI 70
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187
+ A++NP+D++L+++ T++ + A Q+ L + ++D+ AAC+GF+ L A
Sbjct: 71 EAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAI-SFDLAAACTGFVYALSVA 129
Query: 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVH 247
IR G + LVIG D SR D TDR + +LFGD AGAV+++A SE +G+IS +H
Sbjct: 130 DQFIRAGKVKKALVIGSDLNSRKLDETDRSTVVLFGDGAGAVILEA--SEQEGIISTHLH 187
Query: 248 SDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307
+ + L + + Y I M G E F+ AVR + +
Sbjct: 188 ASADKNNAL--VLAQPERGI-----------EKSGY----IEMQGNETFKLAVRELSNVV 230
Query: 308 ESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLAL 367
E L L +DWL+ HQAN RII A A +L++ M +V+ L Y N SAA++P+AL
Sbjct: 231 EETLLANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVAL 290
Query: 368 DEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
DEA+R G+++ G + FG G TWGSA++R+
Sbjct: 291 DEAIRDGRIQRGQLLLLEAFGGGWTWGSALVRF 323
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 | Back alignment and structure |
|---|
Score = 467 bits (1204), Expect = e-166
Identities = 121/339 (35%), Positives = 176/339 (51%), Gaps = 17/339 (5%)
Query: 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAA 124
R +++G GS P ++SN ++ +D+++EWI RTGIR+RR+ E++ + V A+
Sbjct: 9 RRFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDETIQVMGVAAS 68
Query: 125 SRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLG 183
RAL+ A V+P ++DLV++ T T + I LG N +D++AAC+GF
Sbjct: 69 RRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG-GFDLSAACAGFCHA 127
Query: 184 LVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLIS 243
L AA + GG R+VLV+ + ++ D DR LFGD AGA +V S+ G+
Sbjct: 128 LSIAADAVESGGSRHVLVVATERMTDVIDLADRSLSFLFGDGAGAAVVGP--SDVPGIGP 185
Query: 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303
DG G L+ + + + M+GK VFR+AV V
Sbjct: 186 VVRGIDGTGLGSLHM--------SSSWDQYVEDPSVGRPA----LVMDGKRVFRWAVADV 233
Query: 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS-NLANYGNTSAAS 362
ALE AGLT+ + + HQAN RIID + +RL VP V+S + + GNTS+AS
Sbjct: 234 VPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSAS 293
Query: 363 IPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
+ LALD VRSG V G GFGAGL++ L
Sbjct: 294 VALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLLP 332
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 | Back alignment and structure |
|---|
Score = 463 bits (1194), Expect = e-165
Identities = 126/336 (37%), Positives = 194/336 (57%), Gaps = 26/336 (7%)
Query: 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASR 126
+ G G+ P I N + +DTSDEWIS TGI+ R + + LA EA+ +
Sbjct: 2 NVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHWADDDQDTSDLAYEASVK 61
Query: 127 ALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLV 185
A+ A + PED+D++++ T+T + F A + + LG + D AACSGF+ ++
Sbjct: 62 AIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVA-SMDQLAACSGFMYSMI 120
Query: 186 SAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFD 245
+A +++ G + N+LV+G D LS+ TD TDR + +LFGD AGAV++ SE G+IS++
Sbjct: 121 TAKQYVQSGDYHNILVVGADKLSKITDLTDRSTAVLFGDGAGAVIIGEV-SEGRGIISYE 179
Query: 246 VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQ 305
+ SDG GG+HL + + MNG+EVF+FAVR++
Sbjct: 180 MGSDGTGGKHLYL---------------------DKDTGK--LKMNGREVFKFAVRIMGD 216
Query: 306 TIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPL 365
+EKA LT ID + HQAN RI+++ RL + +++ ++ YGNTSAASIPL
Sbjct: 217 ASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPL 276
Query: 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
++D+ +++GK+K TI GFG GLTWG+ ++WG
Sbjct: 277 SIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKWG 312
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 | Back alignment and structure |
|---|
Score = 458 bits (1181), Expect = e-162
Identities = 112/338 (33%), Positives = 174/338 (51%), Gaps = 17/338 (5%)
Query: 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAAS 125
R L+ G+ P ++ND++ + +D+SDEWI RTGI+ RR + ES +A EA
Sbjct: 11 RSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACR 70
Query: 126 RALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGL 184
RAL A ++ D+D V++ T+T A + +LG K +D++A +GF L
Sbjct: 71 RALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGIL-GFDLSAGAAGFGYAL 129
Query: 185 VSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISF 244
+AA IRGGG +LV+G + LS D DRG+C +F D A AV+V + G+
Sbjct: 130 GAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGE--TPFQGIGPT 187
Query: 245 DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304
SDGE + D + P+ + + + G VFR+A +
Sbjct: 188 VAGSDGEQADAIRQ--------DIDWITFAQNPSGPRPF----VRLEGPAVFRWAAFKMG 235
Query: 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN-LANYGNTSAASI 363
A++ AG+ ID + HQAN RI + + L + + V++N + + GNTSAASI
Sbjct: 236 DVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASI 295
Query: 364 PLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
PLA+ E + +G KPG G+GAGL++ + ++R
Sbjct: 296 PLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRMP 333
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 | Back alignment and structure |
|---|
Score = 456 bits (1175), Expect = e-161
Identities = 135/334 (40%), Positives = 182/334 (54%), Gaps = 17/334 (5%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
++ G+ VP ++N D +DTSDEWI RTGI+ RRV + E + LA +A L
Sbjct: 3 GILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEYTSDLAFKAVEDLL 62
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187
+ E VD V++ T+TP+ LF A + G K AYD+ A C G++ L A
Sbjct: 63 RRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKA--FAYDLLAGCPGWIYALAQA 120
Query: 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVH 247
+ G + VL +G +ALS+ DW DR + +LFGD GA +V E G SF +
Sbjct: 121 HALVEAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVR-EGYGFRSFVLG 179
Query: 248 SDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307
+DG G + L + P + +YMNG+EVF+FAVRV+
Sbjct: 180 ADGTGAKELYH--------ACVAP-----RLPDGTSMKNRLYMNGREVFKFAVRVMNTAT 226
Query: 308 ESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLAL 367
A+EKAGLT I + HQAN RIIDA RL +P ERV N+ YGNTS ASIPLAL
Sbjct: 227 LEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLAL 286
Query: 368 DEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
EAV +G+++ G + FGAGLTW +A+L WG
Sbjct: 287 KEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTWG 320
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 | Back alignment and structure |
|---|
Score = 448 bits (1155), Expect = e-158
Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 13/351 (3%)
Query: 54 SSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGK 113
L G G ++P Q+SN DL ++TSDE+I RTG+R R + +
Sbjct: 12 QMGRGSENLYFQGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPE 71
Query: 114 ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYD 172
++++ L V AA +A++ A + PED+DL+L+ T +P+ A I LG ++ P D
Sbjct: 72 QAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIP-VLD 130
Query: 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRG--SCILFGDAAGAVL 230
I A SG L GL A I G R+VLV+ G+ LS+ D +DRG IL GD AGAV+
Sbjct: 131 IRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVV 190
Query: 231 VQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYM 290
V A +S +DGL+ + +DG L + + M
Sbjct: 191 VSAGESLEDGLLDLRLGADGNYFDLLM-TAAPGSASPTFLDENVLRE--GGGE----FLM 243
Query: 291 NGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS 350
G+ +F A + + + L LT+ ID ++ HQ N RI+DAV +L +P +
Sbjct: 244 RGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAV 303
Query: 351 NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
+ GN ++AS P+ L ++PG + +G+G TWG+A+ R
Sbjct: 304 TVDRLGNMASASTPVTLAMFW--PDIQPGQRVLVLTYGSGATWGAALYRKP 352
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 | Back alignment and structure |
|---|
Score = 443 bits (1143), Expect = e-157
Identities = 137/333 (41%), Positives = 200/333 (60%), Gaps = 28/333 (8%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
K++G G +P ++N DL KIVDTSDEWI+ RTGI+ RR+ E++T +A +AA AL
Sbjct: 4 KIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIAKE-ETITYMATQAAKEAL 62
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSA 187
+ A ++PE++DL+++ T TP+ F A + L K A+DI+AACSGF+ L A
Sbjct: 63 REANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVY-AFDISAACSGFIYALDIA 121
Query: 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVH 247
I+ G +NVLVIG + LS DW DR +C+LFGD AGAV+V + + +++ ++
Sbjct: 122 DSFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSE-DKSDILATRMY 180
Query: 248 SDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307
++G L+A D G I M G+E+F+ AVR + +
Sbjct: 181 AEGSLEELLHA--------DNCGY----------------IRMKGRELFKVAVRSMEEVC 216
Query: 308 ESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLAL 367
LEKAG+ + ++ HQAN RII+A+A +L++P E+V N+ YGNTSAASIP+AL
Sbjct: 217 REVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIAL 276
Query: 368 DEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
EA++ GKVK G I G GLTWG+ +LR+
Sbjct: 277 HEAIKEGKVKRGDLILMTAMGGGLTWGAVLLRY 309
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 | Back alignment and structure |
|---|
Score = 441 bits (1136), Expect = e-156
Identities = 115/338 (34%), Positives = 180/338 (53%), Gaps = 22/338 (6%)
Query: 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAA 124
++ VP ++N L++++DTS WI RTGI RR+++ E+ + L + A
Sbjct: 2 KNYARISCTSRYVPENCVTNHQLSEMMDTSAAWIHSRTGISERRIVTQ-ENTSDLCHQVA 60
Query: 125 SRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLG 183
+ L+ + ++D +L+ T TP+ A Q+ A+G A+DI+AACSGF+
Sbjct: 61 KQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAF-AFDISAACSGFVYA 119
Query: 184 LVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLIS 243
L A + G ++ LVIGG+ S+ DWTDR + +LFGD A VL++A +E ++
Sbjct: 120 LSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEA--AETPHFLN 177
Query: 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303
+ +DG+ L + + Q + M G+ +F FA++ V
Sbjct: 178 EKLQADGQRWTALTS--------GYTINESPFYQGHKQASKT--LQMEGRSIFDFAIKDV 227
Query: 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASI 363
Q I S + ++D+LLLHQAN RIID +A + + E+ ++N+ YGNTSAASI
Sbjct: 228 SQNILSLVTD-----ETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASI 282
Query: 364 PLALDEAVRSGKVKPG--HTIAAAGFGAGLTWGSAILR 399
P+ LDEAV +G + G + GFG GLTWGS +L
Sbjct: 283 PILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLT 320
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 | Back alignment and structure |
|---|
Score = 413 bits (1064), Expect = e-144
Identities = 60/366 (16%), Positives = 137/366 (37%), Gaps = 46/366 (12%)
Query: 58 SRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVR-------TGIRNRRVL 110
R ++ + + G +++ ++ + + + + + ++ GI RR+
Sbjct: 3 PRGSHMLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLW 62
Query: 111 SGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPL 169
+ A +AA +AL A + E + L++ + + + L A+ + LG ++ +
Sbjct: 63 DQDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCM 122
Query: 170 AYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWT--------------- 214
+D+ AC F+ G+ AA + G LV+ G+ + + T
Sbjct: 123 TFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFR 182
Query: 215 DRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGS 274
+ + + G A A+++ + D + C
Sbjct: 183 NELAALTLGCGAAAMVMARSELVPDAP-RYKGGVTRSATEWNKLCRGNLDR--------- 232
Query: 275 VLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRII 334
+ + + + +++ +T +A + G + +D ++HQ ++
Sbjct: 233 -------------MVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHT 279
Query: 335 DAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWG 394
A + +V++ +GN AS+P+ L + G++K G IA G G+GL
Sbjct: 280 AAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCS 339
Query: 395 SAILRW 400
A + W
Sbjct: 340 MAEVVW 345
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 | Back alignment and structure |
|---|
Score = 390 bits (1005), Expect = e-135
Identities = 68/349 (19%), Positives = 127/349 (36%), Gaps = 24/349 (6%)
Query: 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSG--KESLTGLAVE 122
+ G + +P L + D + D S GI + V S +++ +A
Sbjct: 3 WENLFVSGVAAWLPPLSTAQDA--VMAGLLDPARSKLRGIESVTVASDAEEDAPPRMAAR 60
Query: 123 AASRALQMAEVNPEDVDLVLMCTSTPE--DLFGGATQIPKALGCKNNPLAYDITAACSGF 180
AA AL +V+P DV LVL + + DL+ A+ + ++ P A+ + C+G
Sbjct: 61 AARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVP-AFGLAQRCNGG 119
Query: 181 LLGLVSAACHIRGG---GFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
+ + A ++ G G +L G D + ++GD A A+++ D
Sbjct: 120 MGAIELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNSVDVTMYGDGAAALVLSTRD-G 178
Query: 238 DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIY----MNGK 293
++S D D + V P ++ +
Sbjct: 179 FARVLSTATGVDNSLEILARG--------DEPFAPHPVEPSPVADLGTRTVRGAELADLP 230
Query: 294 EVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLA 353
++ + ++ ALE AG + I ++ + + + + L +P ER
Sbjct: 231 DLTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTGHELHDLLGLPDERTSWAYG 290
Query: 354 N-YGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
G+ A L V + V+PG + G GAG T +A++
Sbjct: 291 RTTGHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCTAAVVEIL 339
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 | Back alignment and structure |
|---|
Score = 380 bits (977), Expect = e-130
Identities = 77/382 (20%), Positives = 140/382 (36%), Gaps = 66/382 (17%)
Query: 69 KLVGCGSAVPTLQISNDDLA------------------------KIVDTSDEWISVRTGI 104
+ G P +SN +L + +S E+I +GI
Sbjct: 26 VIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGI 85
Query: 105 RNRRVLSGKESLTG--------------------LAVEAASRALQMAEVNPEDVDLVLMC 144
++R V++ + +AV AA +A++ E + VL
Sbjct: 86 KSRYVVAKPGIVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCA 145
Query: 145 TSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIG 203
S + + A ++ ALG A+D+ ACS GL +AA + GG VL++
Sbjct: 146 CSNMQRAYPAMAIEVQNALGLGG--FAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVN 203
Query: 204 GDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDD--GLISFDVHSDGEGGRHLNACIK 261
+ S ++ DR S +FGD A A +V+ D ++ + + NA
Sbjct: 204 PEICSGHLNFRDRDSHFIFGDVATAAIVERADDAQGGWSILGTKLKTQFSNNIRNNAGFL 263
Query: 262 GNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSI 321
+ G++VF+ V +V + I + G+ +
Sbjct: 264 NRAWPEGRDK--------ADKL----FVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGL 311
Query: 322 DWLLLHQANQRIIDAVANRL---DVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKP 378
+ LHQAN + + + ++ D + + L +Y NTS+A +A + +
Sbjct: 312 KRMWLHQANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKHQ--DDMAQ 369
Query: 379 GHTIAAAGFGAGLTWGSAILRW 400
G FGAG + G+ ++
Sbjct: 370 GDLGLICSFGAGYSAGTVFVQK 391
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 | Back alignment and structure |
|---|
Score = 250 bits (639), Expect = 7e-80
Identities = 50/343 (14%), Positives = 106/343 (30%), Gaps = 43/343 (12%)
Query: 71 VGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQM 130
VP + LA+ + G V + + + AA +
Sbjct: 6 DKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITD 65
Query: 131 AEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189
+ + + +V++ T + D A QI LG + +++ AC + A
Sbjct: 66 E--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 123
Query: 190 HIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSD 249
++ VLVI D + + G A A+++ + + +++ + +
Sbjct: 124 YLATRPNEKVLVIATDTARYGLNSGGEPT---QGAGAVAMVI----AHNPSILALNEDAV 176
Query: 250 GEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIES 309
T D + P + Y ++G +R Q+
Sbjct: 177 A-------------YTEDVYDF------WRPTGHKY--PLVDGALSKDAYIRSFQQSWNE 215
Query: 310 ALEKAGLTMSSIDWLLLHQANQRII------------DAVANRLDVPMERVISNLANYGN 357
++ G +++ L H ++ + RL E + GN
Sbjct: 216 YAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGN 275
Query: 358 TSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
S+ L+L + + ++ G TI +G+G
Sbjct: 276 IYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATL 318
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 3e-78
Identities = 66/367 (17%), Positives = 121/367 (32%), Gaps = 58/367 (15%)
Query: 70 LVGCGSAVPTLQISNDDLAKIV---DTSDEWISV------RTGIRNRRVLSGKESLTG-- 118
L +VP I+ ++ ++ T + + TG+R R ++ E
Sbjct: 12 LCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHP 71
Query: 119 ---------------LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALG 163
RAL AE+ D+D+++ + T + + +G
Sbjct: 72 GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMG 131
Query: 164 CKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCI-- 220
+ I C+ + A N L++ + S TD G
Sbjct: 132 FDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQPTDLGVGSLL 191
Query: 221 ---LFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLA 277
LFGD A +V+ G + +G I T D + +
Sbjct: 192 CNGLFGDGIAAAVVRG-----RGGTGVRLERNGS------YLIPK--TEDWIMYDVKATG 238
Query: 278 FPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV 337
F + + + + ++ + G S +D+ ++H RI+D +
Sbjct: 239 F----------HFLLDKRVPATMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDL 288
Query: 338 ANRLDVPMERVISN---LANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWG 394
+ L+V + L YGN ++A + AL G V+ G AGFG G+T
Sbjct: 289 STFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAE 348
Query: 395 SAILRWG 401
++ W
Sbjct: 349 MSLGCWQ 355
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 3e-77
Identities = 73/400 (18%), Positives = 126/400 (31%), Gaps = 58/400 (14%)
Query: 42 CSSTIAGSEKSVSSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSD------ 95
+ AG V ++ P + G + P ++ D A V
Sbjct: 8 GAPRRAGQRHEVGLAQ-LPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQR 66
Query: 96 ---EWISVRTGIRNR-----------------------RVLSGKESLTGLAVEAASRALQ 129
+ ++ I R R+ E LAV+ + RAL
Sbjct: 67 ERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALA 126
Query: 130 MAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAA 188
++ L+++ TST G I K LG + + C+ + L +A
Sbjct: 127 GLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTAT 186
Query: 189 CHIRGGGFRNVLVIGGDALSRF----TDWTDRGSCILFGDAAGAVLVQACDSEDDGLISF 244
++R LV+ + S D D LFGD A+++ A + L
Sbjct: 187 NYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGA-SQVQEKLEPG 245
Query: 245 DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304
V + L + T D + + + + + V
Sbjct: 246 KVVVRSSFSQLL------DNTEDGIVLGVNHNGI---------TCELSENLPGYIFSGVA 290
Query: 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN---LANYGNTSAA 361
+ L GL +S ID +H +II+ L + E + LA +GN +
Sbjct: 291 PVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSV 350
Query: 362 SIPLALDEAVRSGKVKPGH-TIAAAGFGAGLTWGSAILRW 400
S+ L+ V+ + T A FG G+T +
Sbjct: 351 SLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDI 390
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 | Back alignment and structure |
|---|
Score = 211 bits (538), Expect = 7e-65
Identities = 62/329 (18%), Positives = 118/329 (35%), Gaps = 34/329 (10%)
Query: 89 KIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTP 148
+I+ + S + + R E + LA EAA +A++ ++ ++ C+ +
Sbjct: 75 EILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG 134
Query: 149 EDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL 207
D+ G ++ LG I AC L A VLV+ +
Sbjct: 135 IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEIT 194
Query: 208 SRF------TDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIK 261
D+ FGD AGAV+V A E + +
Sbjct: 195 VLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIY--EIAAAMQETVA---- 248
Query: 262 GNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSI 321
++ A+G + + + ++ + +++E AL G+ +
Sbjct: 249 --ESQGAVGGHLRAFGW---------TFYFLNQLPAIIADNLGRSLERALAPLGVREWND 297
Query: 322 DWLLLHQANQRIIDAVANRLDVPMERVISN---LANYGNTSAASIPLALDEAVRSGKVKP 378
+ + H N IIDA+ +L + +++ + YGN +A++ +DE + V+
Sbjct: 298 VFWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEG 357
Query: 379 GHTIA-------AAGFGAGLTWGSAILRW 400
T GFG GL+ + +LR
Sbjct: 358 RSTTGDGLQWGVLLGFGPGLSIETVVLRS 386
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 1e-62
Identities = 59/336 (17%), Positives = 109/336 (32%), Gaps = 44/336 (13%)
Query: 71 VGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQM 130
VP I LA+ + + G V + + A AA L
Sbjct: 11 DKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAILTK 70
Query: 131 AEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189
+ E +D+V++ T + D A + + +G + +++I A G GL A
Sbjct: 71 E--DKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKN 128
Query: 190 HIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSD 249
H+ + VLV+ D + + G A A+LV S + +++ +
Sbjct: 129 HVALHPDKKVLVVAADIAKYGLNSGGEPTQ---GAGAVAMLV----SSEPRILALKEDN- 180
Query: 250 GEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIES 309
T D + P + Y ++G ++ Q +
Sbjct: 181 ------------VMLTQDIYDF------WRPTGHPY--PMVDGPLSNETYIQSFAQVWDE 220
Query: 310 ALEKAGLTMSSIDWLLLHQANQRII------------DAVANRLDVPMERVISNLANYGN 357
++ GL + D L H ++ +A R+ E I GN
Sbjct: 221 HKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEESIIYSRRVGN 280
Query: 358 TSAASIPLALDEAV-RSGKVKPGHTIAAAGFGAGLT 392
S+ L L + + + G+ I +G+G
Sbjct: 281 LYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAV 316
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 4e-57
Identities = 61/336 (18%), Positives = 116/336 (34%), Gaps = 37/336 (11%)
Query: 82 ISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLV 141
++ + L K D R + + LA EAA +A+Q + + +
Sbjct: 94 LTEEILKKNPDVCAFVEVPSLDARQAML---AMEVPRLAKEAAEKAIQEWGQSKSGITHL 150
Query: 142 LMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVL 200
+ C++T DL G ++ K LG + + C L A VL
Sbjct: 151 IFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVL 210
Query: 201 VIGGDALSRF------TDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGR 254
VI + + T LFGD A A++V A F++ +
Sbjct: 211 VICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQ--T 268
Query: 255 HLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKA 314
+ + A+G + + V + + A +
Sbjct: 269 VVPN------SEGAIGGKVREVGL---------TFQLKGAVPDLISANIENCMVEAFSQF 313
Query: 315 GLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN---LANYGNTSAASIPLALDEAV 371
++ + + ++H + I+D V +L++ ++I ++ YGN S+A + LD+
Sbjct: 314 KISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTR 373
Query: 372 RSGKVKPGHT-------IAAAGFGAGLTWGSAILRW 400
++ T GFG GLT + +L+
Sbjct: 374 KASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKS 409
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 | Back alignment and structure |
|---|
Score = 169 bits (429), Expect = 1e-48
Identities = 65/380 (17%), Positives = 109/380 (28%), Gaps = 46/380 (12%)
Query: 37 FRRVLCSSTIAGSEKSVSSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDE 96
+ S+ I +S + G +G + A + +
Sbjct: 63 IDGIAASTGI----ESRGWMLPLEAAVAPGGGGDLGAAREALVRDGFTEQDANRAIAALK 118
Query: 97 WISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGAT 156
+ ++ R + + AA ALQ+A ++ DVD ++ ST L G
Sbjct: 119 AVPASQTVQERTAPAWEAVQA-YGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDV 177
Query: 157 QIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTD 215
+ L + + + T AC L AA + R VLV+ +ALS D
Sbjct: 178 ALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQPAD 237
Query: 216 RG-----SCILFGDAAGAVLVQACDSEDDGLISFDVHS----DGEGGRHLNACIKGNQTN 266
+LF D A A +V + L +
Sbjct: 238 DTLESLIVRLLFADTAVAAVVTGRPRPESVLRLDAAWHHTLPGTRD------LHRLETRA 291
Query: 267 DALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSS--IDWL 324
D ++ + R V E + SS D L
Sbjct: 292 DGTH------------------FVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWHPDVL 333
Query: 325 LLHQANQRIIDAVANRLDVPME----RVISNLANYGNTSAASIPLALDEAVRSGKVKPGH 380
L H R+++ + + + GN A++ L A +G+ K G
Sbjct: 334 LAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRGGAAVFDILRRAHDAGQ-KTGS 392
Query: 381 TIAAAGFGAGLTWGSAILRW 400
GLT + W
Sbjct: 393 RAVLYAAAPGLTATALEGEW 412
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 5e-45
Identities = 56/332 (16%), Positives = 110/332 (33%), Gaps = 42/332 (12%)
Query: 90 IVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPE 149
I+ + + N R + + L EAA +A++ + +++C
Sbjct: 72 ILKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGV 131
Query: 150 DLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS 208
D+ G Q+ K L + + C L A VL++ + +
Sbjct: 132 DMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTT 191
Query: 209 RFTDWTDRGS------CILFGDAAGAVLVQACDSEDDGLISFDVHSDGE----GGRHLNA 258
+ GD A AV+V A F++ S +
Sbjct: 192 TCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHG--- 248
Query: 259 CIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTM 318
I+G+ L + K V + + A ++
Sbjct: 249 AIEGHLLESGLS------------------FHLYKTVPTLISNNIKTCLSDAFTPLNISD 290
Query: 319 SSIDWLLLHQANQRIIDAVANRLDVPMERVISN---LANYGNTSAASIPLALDE----AV 371
+ + + H I+D V ++ + E++ L +YGN S+A++ +DE ++
Sbjct: 291 WNSLFWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL 350
Query: 372 RSGKVKPGHTIA---AAGFGAGLTWGSAILRW 400
+G+ G + GFG G+T + +LR
Sbjct: 351 ENGQATTGEGLEWGVLFGFGPGITVETVVLRS 382
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 5e-42
Identities = 68/416 (16%), Positives = 122/416 (29%), Gaps = 88/416 (21%)
Query: 55 SSESRAPRLINRGC---------KLVGCGSAVPTLQISNDDLAKIVDTSD---------E 96
S PR + + G G P + D + +
Sbjct: 10 HSSGLVPRGSHMAASTVAGELGLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVL 69
Query: 97 WISVRTGIRNR---------------------RVLSGKESLTGLAVEAASRALQMAEVNP 135
I+ TGI R LAVEA+ +A+ A + P
Sbjct: 70 AINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVP 129
Query: 136 EDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITA-ACSGFLLGLVSAACHIRGG 194
+ ++ T T G + K LG + + CSG L L +AA G
Sbjct: 130 AQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH 189
Query: 195 GFRN----VLVIGGDALSRFTDWTDRG---------SCILFGDAAGAVLVQACDSEDDG- 240
R +LV+ + + LF D A AV++ E G
Sbjct: 190 TARGKPARILVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGK 249
Query: 241 -----LISFD--VHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGK 293
L+ ++ V D E + + S + + K
Sbjct: 250 PAIYDLLGWENRVIPDSEH------DLGFDVDPMGWKVVLS-----------PRVPVLAK 292
Query: 294 EVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN-- 351
+ + +++ L + + DW +H I+ + + + E + ++
Sbjct: 293 ASLQPTYADLLSSLQDQLPSSYQKPADFDW-AMHPGGATILSGAESAMGLTPEHMRASYD 351
Query: 352 -LANYGNTSAASIPLALDEAVRSGKVKPGHT------IAAAGFGAGLTWGSAILRW 400
N+GN+S+A+I L+ + FG G+ +L+
Sbjct: 352 RYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGINVEMCMLKR 407
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 6e-41
Identities = 47/401 (11%), Positives = 111/401 (27%), Gaps = 71/401 (17%)
Query: 46 IAGSEKSVSSSESRAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIR 105
S +E+ + ++ G +V P+ + +L K ++ G
Sbjct: 5 HHHSSGVDLGTENLYFQSMDVG--IVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQA 62
Query: 106 NRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALG- 163
+ +E + L + ++ ++ + + + + T T D T + +
Sbjct: 63 KMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEE 122
Query: 164 -CKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILF 222
+ D T AC G + +A I + + + +
Sbjct: 123 SGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVV--AGDIAVYATGNARPTG 180
Query: 223 GDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQH 282
G A A+L+ + + F+ G +H K + ++ +G
Sbjct: 181 GVGAVALLIG-----PNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDG--------K 227
Query: 283 YSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRL- 341
S + + + + T++ +++ H +++ R+
Sbjct: 228 LSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARML 287
Query: 342 -----------------------DVPMERVISNL-------------------------A 353
DV +E +
Sbjct: 288 LNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSN 347
Query: 354 NYGNTSAASIPLALDEAV--RSGKVKPGHTIAAAGFGAGLT 392
GN +S+ +L + S + G I +G+GL
Sbjct: 348 QNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLA 388
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Length = 450 | Back alignment and structure |
|---|
Score = 126 bits (316), Expect = 2e-32
Identities = 52/382 (13%), Positives = 106/382 (27%), Gaps = 87/382 (22%)
Query: 71 VGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQM 130
+ P + + L S ++ G + E + ++ A + L+
Sbjct: 7 LAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEK 66
Query: 131 AEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNP--LAYDITAACSGFLLGLVSA 187
+++P+ + + + + T D T + + N D T AC G L++
Sbjct: 67 YKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNC 126
Query: 188 ACHIRGGGFRNVLVIGGDA-LSRFTDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDV 246
+ + + + + + R + G AA A+L+ D I F+
Sbjct: 127 VNWVESNSWDGRYGLVICTDSAVYAEGPARPTG---GAAAIAMLI-----GPDAPIVFES 178
Query: 247 HSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306
G H V F + + ++GK + +
Sbjct: 179 KLRGSHMAH-------------------VYDFYKPNLASEYPVVDGKLSQTCYLMALDSC 219
Query: 307 IESALEK------AGLTMSSIDWLLLHQANQRIIDAVANRL------------------- 341
+ K +++ D+ + H +++ RL
Sbjct: 220 YKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEK 279
Query: 342 --------------DVPMERVISNLA----------------NYGNTSAASIPLALDEAV 371
+E+V LA GN AS+ A V
Sbjct: 280 FTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLV 339
Query: 372 -RSGKVKPGHTIAAAGFGAGLT 392
G + +G+G T
Sbjct: 340 HNKHSDLAGKRVVMFSYGSGST 361
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 6e-26
Identities = 60/304 (19%), Positives = 106/304 (34%), Gaps = 43/304 (14%)
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AAC 177
LA EAA +A+ D+ +++ T++ + G ++ LG + + + C
Sbjct: 99 LAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGC 158
Query: 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALS---RFTDWTDRGSCI---LFGDAAGAVLV 231
L A VLV+ + D + + LFGD A AV+V
Sbjct: 159 FAGCAALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIV 218
Query: 232 QACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMN 291
D++D F++ I ++ AL ++ +
Sbjct: 219 -GADADDVERPLFEIV-------SAAQTIIPE-SDHALNM----------RFTERRLDGV 259
Query: 292 -GKEVFRFAVRVVPQTIESA----LEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME 346
G++V V + + L G + + +H + I+D V L +
Sbjct: 260 LGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMDQVDAALGLEPG 319
Query: 347 -----RVISNLANYGNTSAASIPLALDEAVRSGKVKPGH-----TIAAAGFGAGLTWGSA 396
R + L++YGN S A++ ALDE R K FG G+T +
Sbjct: 320 KLAASRRV--LSDYGNMSGATVIFALDELRRQRKEAAAAGEWPELGVMMAFGPGMTVDAM 377
Query: 397 ILRW 400
+L
Sbjct: 378 LLHA 381
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 2e-22
Identities = 68/393 (17%), Positives = 126/393 (32%), Gaps = 72/393 (18%)
Query: 56 SESRAPRLINRGCKLVGCGSAVPTLQISNDDL----AKIVDTSDEW------ISVRTGIR 105
S SR N ++G G +VP IS L + E I ++ I+
Sbjct: 2 SLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIK 61
Query: 106 NR-----------------------RVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVL 142
R K+ + LA +A RAL+ + D+ ++
Sbjct: 62 TRHLVRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIV 121
Query: 143 MCTSTPEDLFGGATQIPKALGCKNNPLAYDITA-ACSGFLLGLVSAACHIRGGGFRNVLV 201
TST + ++ LG + + C L L +AA + +LV
Sbjct: 122 SVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILV 181
Query: 202 IGGDALSRFTDWTDRGSCI----LFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLN 257
+ + S TD G + +F D + A ++ + + ++V R
Sbjct: 182 VCTEVCSLHFSNTDGGDQMVASSIFADGSAAYIIGC-NPRIEETPLYEVMCSIN--RSFP 238
Query: 258 A---CIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKA 314
+ + + + + +++ L+KA
Sbjct: 239 NTENAMVWDLEKEGWNLGLD------------------ASIPIVIGSGIEAFVDTLLDKA 280
Query: 315 GLTMS-----SIDWLLLHQANQRIIDAVANRLDVPMERVISN---LANYGNTSAASIPLA 366
L S L+H + I+ + N L + ++ + YGN S+AS+
Sbjct: 281 KLQTSTAISAKDCEFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFV 340
Query: 367 LDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 399
+D A +S + FG GL + L+
Sbjct: 341 MDHARKSK--SLPTYSISLAFGPGLAFEGCFLK 371
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Length = 347 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 4e-06
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 14/89 (15%)
Query: 119 LAVEAASRALQMAEVNPEDVDLV----LMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT 174
L +A AL + ED+D+ L+ + + +IP +
Sbjct: 58 LMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNVTANYVARHLKIP----------FLCLF 107
Query: 175 AACSGFLLGLVSAACHIRGGGFRNVLVIG 203
ACS + + ++ I GG + L
Sbjct: 108 GACSTSMESIAISSALIDGGFAKRALAAT 136
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 48/354 (13%), Positives = 102/354 (28%), Gaps = 136/354 (38%)
Query: 85 DDL--AKIVDTSDEWISVRTGI--RNRRV---LSGKESLTGLAVEAASRALQMAEVNPED 137
++ AK + + +S + + R ++V LS + T ++++ S L EV
Sbjct: 251 LNVQNAKAWNAFN--LSCKILLTTRFKQVTDFLSAATT-THISLDHHSMTLTPDEV---- 303
Query: 138 VDLVLMCTST-PEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGF 196
L+L P+DL P+ + NP L +++ + +
Sbjct: 304 KSLLLKYLDCRPQDL-------PREV-LTTNPRR-----------LSIIAESIRDGLATW 344
Query: 197 RNVLVIGGDALSRFTDWTDRGSCI----------LFGDAA---------GAVLV---QAC 234
N + D L+ + S + +F + +L
Sbjct: 345 DNWKHVNCDKLTTIIE-----SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399
Query: 235 DSEDDGLI-----------------SFDVHS---------DGEGGRHLNACIKGNQTNDA 268
D ++ + + S + E H + +
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH-RSIVDHYNIPKT 458
Query: 269 LGSNGSVLAFPPQH---YSYS-------------------SIYMNGKEVFRFAVRVVPQT 306
S+ P + Y YS ++++ FRF
Sbjct: 459 FDSDD----LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD----FRF-------- 502
Query: 307 IESALEKAGLTMSSIDWLL--LHQAN---QRIIDAVANRLDVPMERVISNLANY 355
+E + ++ +L L Q I D D ER+++ + ++
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDN-----DPKYERLVNAILDF 551
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 221 LFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPP 280
LFGD + AV+V + F + S QT F P
Sbjct: 801 LFGDGSAAVIVGSDPDISIERPLFQLVSAA-------------QT------------FIP 835
Query: 281 QHYSYSSIYMNGKEV---FRFAVRV---VPQTIESALEKAGLTMSSIDW----LLLHQAN 330
S +I N +EV F V + + +E L +A + DW + H
Sbjct: 836 N--SAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGG 893
Query: 331 QRIIDAVANRLDVPMERVISN---LANYGNTSAASIPLALDE----AVRSGKVKPGHTI- 382
I+DAV +L++ +++ + L+ YGN S+A + LDE +++ + G +
Sbjct: 894 PAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLD 953
Query: 383 --AAAGFGAGLTWGSAILR 399
GFG GLT + +L
Sbjct: 954 WGVLFGFGPGLTIETVVLH 972
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 401 | |||
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 100.0 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 100.0 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 100.0 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 100.0 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 100.0 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 100.0 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 100.0 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 100.0 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 100.0 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 100.0 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 100.0 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 100.0 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 100.0 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 100.0 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 100.0 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 100.0 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 100.0 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 100.0 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 100.0 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 100.0 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 100.0 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 100.0 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 100.0 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 100.0 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 100.0 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 100.0 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 100.0 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 100.0 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 100.0 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 100.0 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 100.0 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 100.0 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.97 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.94 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.93 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.93 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.93 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.92 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.92 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.92 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.92 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.92 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.92 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.91 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.91 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.91 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.9 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.9 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.9 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.9 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.89 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.89 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.89 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.89 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.89 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.89 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.88 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.88 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.88 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.87 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.87 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.86 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.86 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 99.85 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.85 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.84 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.72 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.65 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.6 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.59 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.52 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.51 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 94.95 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 93.37 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 93.32 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 93.06 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 92.97 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 92.97 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 92.71 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 92.68 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 92.65 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 92.55 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 92.28 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 92.14 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 92.05 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 91.86 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 91.55 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 90.91 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 90.12 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 90.1 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 89.76 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 89.6 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 89.53 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 89.44 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 89.09 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 88.89 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 88.4 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 87.74 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 87.72 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 87.68 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 87.47 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 87.34 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 87.33 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 86.77 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 86.28 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 86.25 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 85.72 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 85.66 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 85.54 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 84.99 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 83.68 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 82.75 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 82.47 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 80.19 |
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-66 Score=509.78 Aligned_cols=332 Identities=35% Similarity=0.535 Sum_probs=291.3
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEec
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTS 146 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 146 (401)
+.+|.|+|+|+|+++|+|+|+++.++.++|||.+++||++||++.++|+..+|+++|+++||+++|++|+|||+||++|+
T Consensus 13 ~srI~g~g~ylP~~~v~n~el~~~~~~~~e~I~~rtGI~~R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~ 92 (350)
T 4ewp_A 13 ASRIVAVGAYRPANLVPNEDLIGPIDSSDEWIRQRTGIVTRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTV 92 (350)
T ss_dssp EEEEEEEEEECCSCEEEHHHHTTTTTCCHHHHHHHHCCSEEECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECS
T ss_pred CCEEEEEEEEcCCCeEcHHHHHHHhCCCHHHHHhccCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccce
Q 015758 147 TPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDA 225 (401)
Q Consensus 147 ~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDG 225 (401)
++++.. +.+.+|+++||++ ++.+||++++|+||+.||.+|.++|++|+.++||||++|.+|++++|.++.++.+||||
T Consensus 93 t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~~d~~~~~~~~lfgDG 171 (350)
T 4ewp_A 93 TFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDVVDPTDRSISFLLGDG 171 (350)
T ss_dssp CCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCCTTCTTTGGGBCEE
T ss_pred cCCCCCCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceecccccccccccccccc
Confidence 998764 6799999999995 67899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCccc---ccCCCCcccccC-CCCCCcccEEEchHHHHHHHHH
Q 015758 226 AGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTND---ALGSNGSVLAFP-PQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 226 AaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~---~~~~~G~~~~~p-~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
|+|++|++.+ +.++..+.+.+||.....+..+........ .....+....+. .....+.+++|+|+++|+++++
T Consensus 172 A~A~vl~~~~--~~~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~ 249 (350)
T 4ewp_A 172 AGAVIVAASD--EPGISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVW 249 (350)
T ss_dssp EEEEEEEEES--SCCBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHH
T ss_pred hheeeeeccc--CCCccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHH
Confidence 9999999875 456777778888876665554322110000 000000000011 1122334689999999999999
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhh-hcccccCccccChHHHHHHHHHHcCCCCCCC
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVI-SNLANYGNTSAASIPLALDEAVRSGKVKPGH 380 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~-~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd 380 (401)
.++++++++|+++|++++|||+|++||+|.++++.++++||+|++++. .++++||||++||+|++|+++++++++++||
T Consensus 250 ~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd 329 (350)
T 4ewp_A 250 SMAKVAREALDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLLEENPELSGG 329 (350)
T ss_dssp THHHHHHHHHHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTS
T ss_pred hhhHHHHHHHHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHHHhCCCCCcC
Confidence 999999999999999999999999999999999999999999999976 5899999999999999999999999999999
Q ss_pred EEEEEeeehhhhheeeEEEeC
Q 015758 381 TIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 381 ~ill~~~G~G~s~~a~llr~~ 401 (401)
+|++++||+|+||+++++||.
T Consensus 330 ~vll~~fG~G~t~~~~vlr~P 350 (350)
T 4ewp_A 330 LALQIGFGAGLVYGAQVVRLP 350 (350)
T ss_dssp EEEEEEEETTTEEEEEEEECC
T ss_pred EEEEEEEchhhEeEEEEEEeC
Confidence 999999999999999999994
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-63 Score=492.36 Aligned_cols=340 Identities=29% Similarity=0.469 Sum_probs=292.7
Q ss_pred cccccCCeEEEEEEEEcCCCccChHHHHhhh-CCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCC
Q 015758 61 PRLINRGCKLVGCGSAVPTLQISNDDLAKIV-DTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVD 139 (401)
Q Consensus 61 ~~~~~~~v~I~gig~~lP~~~v~~~~l~~~~-~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id 139 (401)
|...-++++|.++|+|+|+++++|+|+.+.+ +.+++||.+++||++||++.++++..+|+.+|+++||+++|++|++||
T Consensus 24 ~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id 103 (365)
T 3gwa_A 24 PAAHPPRAAIADIAGHLPEQVLTNDVLAQLYPDWPAEKILAKTGIRERRIAAPRETAADLAYEAARKLFAQGAVGADQVD 103 (365)
T ss_dssp -----CEEEEEEEEEECCSEEEEHHHHHHHCTTCCHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCC
T ss_pred ccceeccEEEEEEEEeCCCcEEcHHHHHHHccCCCHHHHHHhcCccEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 3444578999999999999999999999988 788999999999999999998999999999999999999999999999
Q ss_pred EEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCc
Q 015758 140 LVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGS 218 (401)
Q Consensus 140 ~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~ 218 (401)
+||++|+++++.. ..+.+|+.+||+++++++++++++|+|++.||.+|.++|++|.+++|||+++|.+|..++|.|+.+
T Consensus 104 ~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~dr~~ 183 (365)
T 3gwa_A 104 FVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLHPLDKSV 183 (365)
T ss_dssp EEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSCTTCHHH
T ss_pred EEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccCCcccccc
Confidence 9999999987754 568999999999657999999999999999999999999999999999999999999999998888
Q ss_pred cccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHH
Q 015758 219 CILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRF 298 (401)
Q Consensus 219 ~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~ 298 (401)
+.+|||||+|+||++++....+++.+.+.+++.+.+.+..+......+......+...+.........+++|+|+++|++
T Consensus 184 ~~lfGDGAaA~vl~~~~~~~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~ 263 (365)
T 3gwa_A 184 RTLFGDGASATAVIAEHGELERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAF 263 (365)
T ss_dssp HTTBCCEEEEEEEEEECSSSCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHH
T ss_pred cccccceeEEEEEEecCCCCCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHH
Confidence 88999999999999876433578888888988766655544322110000000000000000000023589999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCC
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKP 378 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~ 378 (401)
+.+.++++++++|+++|++++|||+|++||+|.++++.++++||+|+||+..++++||||++||+|++|++++++|++++
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~~~~g~~~~ 343 (365)
T 3gwa_A 264 SLAEVPRAADRLLALAGEPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETMRANGTLAR 343 (365)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeeehhhhheeeEEEe
Q 015758 379 GHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 379 Gd~ill~~~G~G~s~~a~llr~ 400 (401)
||+|++++||+|+||+++++||
T Consensus 344 Gd~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 344 GMRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp TCEEEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEEEEehhheeEEEEEEC
Confidence 9999999999999999999999
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-63 Score=481.85 Aligned_cols=316 Identities=38% Similarity=0.688 Sum_probs=289.9
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEE
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMC 144 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 144 (401)
.|+.+|.|+|+|+|+++++|+|+++.++.+++||.+++||++||++.++++..+|+.+|+++||+++|++|++||+||++
T Consensus 7 ~~~~~~~~~g~ylP~~~v~n~~l~~~~~~~~~~i~~~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~ 86 (323)
T 3il3_A 7 HMNSRILSTGSYLPSHIRTNADLEKMVDTSDEWIVTRSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVA 86 (323)
T ss_dssp -CEECCCEEEEECCSCEEEHHHHHTTSSCCHHHHHHHTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEE
T ss_pred cccCceeEEEEECCCceEcHHHHHHHhCCCHHHHHHhcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 47889999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCcccccc
Q 015758 145 TSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFG 223 (401)
Q Consensus 145 t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfG 223 (401)
|+++++.. +.+.+|+.+||++ ++++++++++|+|++.||..|.++|++|.+++|||+++|.+|+.++|.|+.++.+||
T Consensus 87 t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfG 165 (323)
T 3il3_A 87 TTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKLDETDRSTVVLFG 165 (323)
T ss_dssp CSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSCCTTCTTTTTTBC
T ss_pred eCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccccCccccccccccc
Confidence 99997654 5799999999995 799999999999999999999999999999999999999999999999988889999
Q ss_pred ceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 224 DAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 224 DGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
|||+|+||++.+ +.+++.+.+.++|...+.+..+- +. .|... ..+++|+|+++|+++.+.+
T Consensus 166 DGA~A~vl~~~~--~~~i~~~~~~s~g~~~~~~~~~g------------~~---~~~~~--~~~~~~~g~~v~~~~~~~~ 226 (323)
T 3il3_A 166 DGAGAVILEASE--QEGIISTHLHASADKNNALVLAQ------------PE---RGIEK--SGYIEMQGNETFKLAVREL 226 (323)
T ss_dssp EEEEEEEEEEES--SCCEEEEEEEECCCCSCSEECCC------------CC---TTCSS--CSCCEECHHHHHHHHHHHH
T ss_pred cceEEEEEEEcC--CCCeEEEEEEEcCCCcceEEECC------------CC---CCCCC--CCcEEEcCHHHHHHHHHHH
Confidence 999999999865 46788888888887665543320 10 01111 1357899999999999999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIA 383 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~il 383 (401)
+++++++|+++|++++|||+|++||+|.++++.++++||+|+||+..++++||||++||+|++|++++++|++++||+|+
T Consensus 227 ~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vl 306 (323)
T 3il3_A 227 SNVVEETLLANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLL 306 (323)
T ss_dssp HHHHHHHHHTTTCCTTTCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeehhhhheeeEEEe
Q 015758 384 AAGFGAGLTWGSAILRW 400 (401)
Q Consensus 384 l~~~G~G~s~~a~llr~ 400 (401)
+++||+|++|+++++||
T Consensus 307 l~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 307 LEAFGGGWTWGSALVRF 323 (323)
T ss_dssp EEEEETTTEEEEEEEEC
T ss_pred EEEEehhheeEEEEEEC
Confidence 99999999999999999
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-61 Score=473.81 Aligned_cols=319 Identities=41% Similarity=0.729 Sum_probs=288.9
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhh-----hCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCC
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKI-----VDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVD 139 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~-----~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id 139 (401)
.|+++|.|+|+|+|+++++|+++++. ++.+++||.+++||++|+++.++++..+|+.+|+++||+++|++|++||
T Consensus 9 ~m~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~~~~i~~rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id 88 (333)
T 4dfe_A 9 TIYSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETSDEWIVARTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSID 88 (333)
T ss_dssp CCEEEEEEEEEECCSEEEEHHHHHHHHC---CCCCHHHHHHHHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC
T ss_pred ccceEEEEEEEECCCcEEcHHHHHHHhccccCCCCHHHhHHhcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 46899999999999999999999998 6778899999999999999988999999999999999999999999999
Q ss_pred EEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCc
Q 015758 140 LVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGS 218 (401)
Q Consensus 140 ~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~ 218 (401)
+||++|+++++.. ..+.+|+.+||+++++++++++++|+|++.||.+|.++|++|++++|||+++|.+|+.++|.|+.+
T Consensus 89 ~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~d~~~ 168 (333)
T 4dfe_A 89 LIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRILDFKDRTT 168 (333)
T ss_dssp EEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCCTTCTTT
T ss_pred EEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccccCcccccc
Confidence 9999999987764 579999999999667999999999999999999999999999999999999999999999999888
Q ss_pred cccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHH
Q 015758 219 CILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRF 298 (401)
Q Consensus 219 ~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~ 298 (401)
+.+|||||+|+||++.+ +.+++.+.+.++|...+.+..+..+.. + +.. ...+++|+|+++|++
T Consensus 169 ~~lfGDGA~A~vl~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~--------~---~~~----~~~~~~~~g~~v~~~ 231 (333)
T 4dfe_A 169 CVLFGDGAGAVILQASD--EPGVLASALHADGSHSNILCTPGNVNG--------G---VVS----GSAFLHMDGQAVFKL 231 (333)
T ss_dssp TTTBCEEEEEEEEEEES--SCSEEEEEEEECGGGGGGEEBCEEEET--------T---EEE----ECCSCEECHHHHHHH
T ss_pred eeeeccccEEEEEEEcC--CCCeEEEEEEEccCCcCeEEECCCCCC--------c---ccc----cCcceeeccHHHHHH
Confidence 88999999999999865 357888888888765554443211000 0 001 012478999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCC
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKP 378 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~ 378 (401)
+.+.++++++++|+++|++++|||||++||+|.++++.++++||+++||+..++++||||++||+|++|+++++++++++
T Consensus 232 ~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~~~~g~~~~ 311 (333)
T 4dfe_A 232 AVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVAVRDGRIKR 311 (333)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCSCT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeeehhhhheeeEEEe
Q 015758 379 GHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 379 Gd~ill~~~G~G~s~~a~llr~ 400 (401)
||+|++++||+|+||+++++||
T Consensus 312 Gd~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 312 GQNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp TCEEEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEEEEchhheeEEEEEEC
Confidence 9999999999999999999999
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-62 Score=482.06 Aligned_cols=327 Identities=30% Similarity=0.463 Sum_probs=287.6
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhCCch-hhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVDTSD-EWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~~~~-~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
+++|.++|+|+|+++++|+|+.+.++..+ +||.+++||++||++.++++..+|+.+|+++||+++|++|++||+||++|
T Consensus 16 ~v~I~~ig~~lP~~~v~n~~l~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t 95 (354)
T 4efi_A 16 GARIAGVVSCVPSKQVDNDYFVERFDASAVRDVVKMIGVNRRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVS 95 (354)
T ss_dssp SEEEEEEEEEECSCEEEGGGGTTTSCHHHHHHHHHHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhCCCcHHHHHHhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 68999999999999999999999887655 89999999999999988999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|+.+||++.++++++++++|+|++.||..|.++|++|.+++|||+++|.+|+.++|.|+.++.+|||
T Consensus 96 ~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfGD 175 (354)
T 4efi_A 96 QTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMIDPTDRSTSLLFGD 175 (354)
T ss_dssp SSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGCCTTCHHHHTTBCC
T ss_pred CCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCCcccccccccccc
Confidence 9987665 579999999999657999999999999999999999999999999999999999999999999888889999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++++. .+++.+.+.++|...+.+..+..... +... ....+... ....+++|+|+++|+++.+.++
T Consensus 176 GA~A~vl~~~~~--~~~~~~~~~s~g~~~~~~~~~~~g~~-p~~~---~~~~~~~~--~~~~~~~~~g~~v~~~~~~~~~ 247 (354)
T 4efi_A 176 AGTMTALETSNG--DAAAHFIIGADGKGARNLIVPSGGFK-PYDA---AADERMAG--KSPECLFMDGGEIFNFTLNAVP 247 (354)
T ss_dssp EEEEEEEEECCS--CCEEEEEEEECGGGGGGEECCSSSSS-CCCG---GGCGGGTT--CCTTSCEECHHHHHHHHHHHHH
T ss_pred ceeEEEEeecCC--CCceEEEEEEcCCCcceEEecCCCCC-CCcc---cccccccc--ccccceEEccHHHHHHHHHHHH
Confidence 999999998653 34667888888865555544322110 0000 00000000 0123588999999999999999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++++|+++|++++|||+|++||+|.++++.++++||+|+||+..++++||||++||+|++|+++++++++++||+|++
T Consensus 248 ~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll 327 (354)
T 4efi_A 248 KLVSRTLDIAGRDKDSYDAFLFHQANLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDRLKEETLQLGM 327 (354)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeehhhhheeeEEEeC
Q 015758 385 AGFGAGLTWGSAILRWG 401 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~~ 401 (401)
++||+|++|+++++||+
T Consensus 328 ~~fG~G~t~~~~ll~~~ 344 (354)
T 4efi_A 328 FGFGVGYSWASAALAVG 344 (354)
T ss_dssp EEEETTTEEEEEEEEEC
T ss_pred EEEchhhhheeeEEEEC
Confidence 99999999999999995
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-61 Score=467.95 Aligned_cols=315 Identities=36% Similarity=0.641 Sum_probs=281.5
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
++++|.++|+|+|+++++|+|+.+.++.+++||.+++||++||++.+++ ..+|+.+|+++||+++|++|++||+||++|
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t 81 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMMDTSAAWIHSRTGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVAT 81 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTTSCHHHHHHHHSCSEEECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHhCCChhhhhhhcCceEEEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 5789999999999999999999999999999999999999999998777 999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
++|++.. ..+.+|+++||++ ++++++++++|+|++.||.+|.++|++|.+++|||+++|.+|++++|.|+.++.+|||
T Consensus 82 ~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~dr~~~~lfGD 160 (321)
T 3il6_A 82 VTPDFNMPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGD 160 (321)
T ss_dssp SSCSCSSSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGGSCTTCTTTGGGBCC
T ss_pred CCCCcCCCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccCCccccccceeecc
Confidence 9987765 5799999999996 5999999999999999999999999999999999999999999999999988899999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCC-CCcccEEEchHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQH-YSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~-~~~~~~~m~g~~v~~~~~~~~ 303 (401)
||+|+||++.+. .+++.+.+.+++...+.+..+..+ ....+.... ....+++|+|+++|+++.+.+
T Consensus 161 GA~A~vl~~~~~--~~i~~~~~~s~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 227 (321)
T 3il6_A 161 GAAGVLIEAAET--PHFLNEKLQADGQRWTALTSGYTI-----------NESPFYQGHKQASKTLQMEGRSIFDFAIKDV 227 (321)
T ss_dssp EEEEEEEEEESS--CCEEEEEEEECGGGGGGEECCCCC-----------CCSTTCCCCCCCCCSCEECHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCC--CCEEEEEEEEcCCCCCeEEeCCCC-----------CCCCCCccccccccceeechHHHHHHHHHHH
Confidence 999999998763 358888888888665555443211 110011110 012358999999999999999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCC--CE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPG--HT 381 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~G--d~ 381 (401)
+++++++|+ ++|||+|++||+|.++++.++++||+|+||+..++++||||++||+|++|++++++|++++| |+
T Consensus 228 ~~~i~~~l~-----~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~ 302 (321)
T 3il6_A 228 SQNILSLVT-----DETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQR 302 (321)
T ss_dssp HHHHHTTCC-----GGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCGGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCE
T ss_pred HHHHHHHcC-----cccCCEEEEcCCCHHHHHHHHHHcCcCHHHhhhhHhhcccHHHHHHHHHHHHHHHhCCCCCCCCCE
Confidence 999999888 89999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred EEEEeeehhhhheeeEEEe
Q 015758 382 IAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 382 ill~~~G~G~s~~a~llr~ 400 (401)
+++++||+|+||+++++|.
T Consensus 303 vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 303 VVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp EEEEEEETTTEEEEEEEEC
T ss_pred EEEEEEehhheeEEEEEEC
Confidence 9999999999999999984
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-61 Score=472.64 Aligned_cols=322 Identities=34% Similarity=0.512 Sum_probs=287.1
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEE
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMC 144 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 144 (401)
.++++|.++|+|+|+++++|+++.+.++.+++||.+++||++||++.++++..+|+.+|+++||+++|++|++||+||++
T Consensus 23 ~~~~~I~~~g~~~P~~~v~~~~l~~~~~~~~~~i~~~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~ 102 (359)
T 3h78_A 23 QGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVN 102 (359)
T ss_dssp -CCCEEEEEEEECCSEEEEHHHHTTTSSCCHHHHHHHHCCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred CCCcEEEEEEEECCCceEcHHHHHHHhCCCHHHHHHhcCceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEE
Confidence 45799999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCC--CCcccc
Q 015758 145 TSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTD--RGSCIL 221 (401)
Q Consensus 145 t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~d--r~~~~l 221 (401)
|+++++.. ..+.+++.+||++ ++++++++++|+|++.||.+|.++|++|.+++|||+++|.+|+.++|.| +.++.+
T Consensus 103 t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~~~d~~~~t~~l 181 (359)
T 3h78_A 103 TLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSIL 181 (359)
T ss_dssp CSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCCCSTTTHHHHTT
T ss_pred eCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCCcccccccccce
Confidence 99987654 5699999999995 7899999999999999999999999999999999999999999999988 667789
Q ss_pred ccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCC----C-CCcccEEEchHHHH
Q 015758 222 FGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQ----H-YSYSSIYMNGKEVF 296 (401)
Q Consensus 222 fGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~----~-~~~~~~~m~g~~v~ 296 (401)
|||||+|+||++.+....+++.+.+.+++...+.+..+.. |.. ..+.. . ....+++|+|+++|
T Consensus 182 fGDGAaA~vl~~~~~~~~~i~~~~~~s~g~~~~~~~~~~~-----------g~~-~~~~~~~~~~~~~~~~~~m~g~~v~ 249 (359)
T 3h78_A 182 LGDGAGAVVVSAGESLEDGLLDLRLGADGNYFDLLMTAAP-----------GSA-SPTFLDENVLREGGGEFLMRGRPMF 249 (359)
T ss_dssp BCEEEEEEEEECCSCSSSEEEEEEEEECGGGGGGEEBCCS-----------STT-SSSTTCHHHHHTTTTSCEECHHHHH
T ss_pred ecceeEEEEEEecCCCCCceEEEEEEEccCccceEEeCCC-----------CCc-cCCccccccccccCCceEeccHHHH
Confidence 9999999999986532457888888888865554443210 100 01100 0 11135889999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCC
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKV 376 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~ 376 (401)
+++.+.++++++++|+++|++++|||+|++||+|.++++.++++||+|+||+..++++||||++||+|++|++++++ +
T Consensus 250 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~--l 327 (359)
T 3h78_A 250 EHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPD--I 327 (359)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGG--S
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHh--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987 9
Q ss_pred CCCCEEEEEeeehhhhheeeEEEeC
Q 015758 377 KPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 377 ~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
++||+|++++||+|++|+++++||.
T Consensus 328 ~~Gd~vll~~fG~G~t~~~~ll~~~ 352 (359)
T 3h78_A 328 QPGQRVLVLTYGSGATWGAALYRKP 352 (359)
T ss_dssp CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCEEEEEEEchhhhheeeeEEeh
Confidence 9999999999999999999999994
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-59 Score=467.07 Aligned_cols=319 Identities=24% Similarity=0.368 Sum_probs=273.9
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhh------------------------hCCchhhhhhhcCcceeEecCCCC-------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKI------------------------VDTSDEWISVRTGIRNRRVLSGKE------- 114 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~------------------------~~~~~~~i~~~~Gi~~R~~~~~~e------- 114 (401)
++++|.|+|+|+|+++|+|+|+.+. ++++++||.+++||++||++.+++
T Consensus 23 ~~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~R~~a~~~~~~~~~~~ 102 (392)
T 3led_A 23 RPAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKSRYVVAKPGIVDPDVM 102 (392)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCEEEESCCGGGGCTTTC
T ss_pred CceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCceEEEecCccccccccc
Confidence 4689999999999999999999753 346789999999999999986532
Q ss_pred -------------CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHH
Q 015758 115 -------------SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGF 180 (401)
Q Consensus 115 -------------~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~ 180 (401)
+..+|+++|+++||+++|++|++||+||++|+++++.. +.+.+|+.+||+ ++++||++++|+|+
T Consensus 103 ~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl--~~~~~dv~~aC~g~ 180 (392)
T 3led_A 103 RPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL--GGFAFDMNVACSSA 180 (392)
T ss_dssp SCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC--CSEEEEEECGGGHH
T ss_pred ccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC--CCeEEEECCccHHH
Confidence 36899999999999999999999999999999997765 468999999999 38999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccceeEEEEEeeccCC--CCCeeEEEEeecCCCCCceee
Q 015758 181 LLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE--DDGLISFDVHSDGEGGRHLNA 258 (401)
Q Consensus 181 ~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAaAvll~~~~~~--~~gl~~~~~~s~g~~~~~l~~ 258 (401)
+.||.+|.++|++|.+++|||+++|.+|++++|.|+.++.+|||||+|+||++.+.. ..+++...+.+++. +.+..
T Consensus 181 ~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~d~~dr~t~~lFGDGA~A~vl~~~~~~~~~~~i~~~~~~s~~~--~~~~~ 258 (392)
T 3led_A 181 TFGLKTAADFVGGGSVDAVLMVNPEICSGHLNFRDRDSHFIFGDVATAAIVERADDAQGGWSILGTKLKTQFS--NNIRN 258 (392)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEGGGCCSSEEEEEEEEEECCC--SSEEB
T ss_pred HHHHHHHHHHHHCCCCCEEEEEeehhcCCcCCcCcccCCcccccccEEEEEEecCCCCCCCeEEEEEEEEccc--ccccc
Confidence 999999999999999999999999999999999999888999999999999986532 23577777777653 22321
Q ss_pred eccCCCcccccCCCCcccccCCC-CCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH
Q 015758 259 CIKGNQTNDALGSNGSVLAFPPQ-HYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV 337 (401)
Q Consensus 259 ~~~~~~~~~~~~~~G~~~~~p~~-~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i 337 (401)
+.+ +.....+.. .....+++|+|+++|+++++.++++++++|+++|++++|||||++||+|.++++.+
T Consensus 259 ~~g-----------~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan~~i~~~~ 327 (392)
T 3led_A 259 NAG-----------FLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQANINMNEII 327 (392)
T ss_dssp CCS-----------GGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECSSCHHHHHHH
T ss_pred CCC-----------cccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCCHHHHHHH
Confidence 110 000000000 01123588999999999999999999999999999999999999999999999999
Q ss_pred HHHc-C--CCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 338 ANRL-D--VPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 338 ~~~l-g--l~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
+++| | ++.+|++.++++||||++||+|++|+++ .+++++||++++++||+|+||++++|||-
T Consensus 328 ~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~--~~~~~~Gd~vll~gfG~G~t~~~~ll~~~ 392 (392)
T 3led_A 328 GRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKH--QDDMAQGDLGLICSFGAGYSAGTVFVQKR 392 (392)
T ss_dssp HHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHC--CTTCCTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHH--hCCCCCCCEEEEEEEChhhEeEEEEEEEC
Confidence 9996 5 6789998999999999999999999986 67999999999999999999999999993
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-59 Score=456.29 Aligned_cols=310 Identities=19% Similarity=0.308 Sum_probs=269.3
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh-------CCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCC
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV-------DTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDV 138 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~-------~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~I 138 (401)
++++|.|+|+|+|+++++|+|+++.+ +.+++||.+++||++||++.++++..+|+.+|+++||+++|++|++|
T Consensus 11 ~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~~~i~~~tGi~~R~~~~~~~~~~~La~~Aa~~al~~ag~~~~~I 90 (345)
T 3s21_A 11 QNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLWDQDVQASDAATQAARKALIDANIGIEKI 90 (345)
T ss_dssp SSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCCCHHHHTTCCSEEEECSSCCCHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred cceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCHHHHHHhhCceeEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 46999999999999999999999875 46789999999999999998899999999999999999999999999
Q ss_pred CEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCC---
Q 015758 139 DLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWT--- 214 (401)
Q Consensus 139 d~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~--- 214 (401)
|+||++|+++++.. ..+.+|+++||+++++++++++++|+|++.||..|.++|++|.+++|||+++|.+|..+++.
T Consensus 91 d~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~~~ 170 (345)
T 3s21_A 91 GLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTLER 170 (345)
T ss_dssp CEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcccccc
Confidence 99999999987765 57999999999965799999999999999999999999999999999999999998765542
Q ss_pred ---CCCc---------cccccceeEEEEEeeccCC--CCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCC
Q 015758 215 ---DRGS---------CILFGDAAGAVLVQACDSE--DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPP 280 (401)
Q Consensus 215 ---dr~~---------~~lfGDGAaAvll~~~~~~--~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~ 280 (401)
++.+ ..+|||||+|+||++.+.. ..++++....+++...+ .+. .+.
T Consensus 171 ~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~~~~i~~~~~~~~~~~~~-------------~~~-------~~~ 230 (345)
T 3s21_A 171 MTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPDAPRYKGGVTRSATEWNK-------------LCR-------GNL 230 (345)
T ss_dssp HTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTTSCEEEEEEEEECGGGTT-------------C------------
T ss_pred ccCCccchhhhhhhccceeeccceeEEEEecCCCCCCCcceeeeccccCcchhh-------------hcc-------ccC
Confidence 3322 4689999999999986532 23455555554432111 000 000
Q ss_pred CCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCcccc
Q 015758 281 QHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSA 360 (401)
Q Consensus 281 ~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~s 360 (401)
..++|+|+++|+++.+.++++++++|+++|++++|||+|++||+|.++++.++++||+|+||++.++++||||++
T Consensus 231 -----~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~s 305 (345)
T 3s21_A 231 -----DRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGP 305 (345)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGG
T ss_pred -----cceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCcCHHHceeeHhhcCchHH
Confidence 136799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 361 ASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 361 asi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
||+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 306 asi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 306 ASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp GHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEEC
Confidence 9999999999999999999999999999999999999999
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-56 Score=434.74 Aligned_cols=319 Identities=42% Similarity=0.623 Sum_probs=282.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++++|+++++.++.+++||.+++||++||++.+ ++..+|+.+|+++||+++|+ ++||.|+++|
T Consensus 4 m~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~-~~~~~la~~Aa~~al~~ag~--~~id~vi~~t 80 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQRHIAGD-LGSGDLALRAASAALASAGL--ERVDAVVLAT 80 (331)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTTCCHHHHHHHHCCCEEECCTT-CCHHHHHHHHHHHHHHHHTC--SCCSEEEEEC
T ss_pred ceeEEEEEEEECCCcEecHHHHHHHhCCCHHHHHHhhCceEEEecCC-CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEe
Confidence 57899999999999999999999999989999999999999999865 79999999999999999999 8999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|+.+||++ +.++++++++|+|++.||..|.++|++|.+++|||+++|.++++++|.|+.++++|||
T Consensus 81 ~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~d~~~~~~~Gd 159 (331)
T 2x3e_A 81 STGDFCCPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSHTLDPADRSTRALFGD 159 (331)
T ss_dssp SSCSEEESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSCTTCHHHHHHBCC
T ss_pred CCCCCCCChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccccCCCccccccceeecc
Confidence 9887643 4689999999995 4899999999999999999999999999999999999999998888888777889999
Q ss_pred eeEEEEEeeccC-CCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDS-EDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 225 GAaAvll~~~~~-~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
||+|+||++.+. .+.+++...+.++|...+++..+... .. +|.......+++|+|+++|+++.+.+
T Consensus 160 GA~A~vL~~~~~a~~~~i~~~~~~~dg~~~~~~~~p~~~-----------~~--~p~~~~~~~~~~~~g~~v~~~~~~~~ 226 (331)
T 2x3e_A 160 GAGAVVLRAGDAEEEGALLAFDLGSDGHQFDLLMTPAVS-----------RA--ERSSGQASNYFRMDGKAVFGQAVTQM 226 (331)
T ss_dssp EEEEEEEEEECTTSTTBEEEEEEEECGGGTTSEEEECCC-----------HH--HHHHTCCCCCCEECHHHHHHHHHHHH
T ss_pred ccEEEEEEecCCCCCCceEEEEEEEcCCCCCeEEecCCC-----------CC--CCCccCcCceEEecCHHHHHHHHHHH
Confidence 999999997642 23567777777777655555544211 10 01000012357899999999999999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIA 383 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~il 383 (401)
+++++++|+++|++++|||+|++||+|.++++.+.++||++++|+..++.+|||+++||+|++|+++++++++++||+++
T Consensus 227 ~~~i~~aL~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vl 306 (331)
T 2x3e_A 227 SDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMV 306 (331)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred EEeeehhhhheeeEEEeC
Q 015758 384 AAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 384 l~~~G~G~s~~a~llr~~ 401 (401)
+++||+|++|+++++||.
T Consensus 307 l~~~G~G~~~~~~~l~~~ 324 (331)
T 2x3e_A 307 LTGFGAGLTWGSVALRWP 324 (331)
T ss_dssp EEEEETTTEEEEEEEECC
T ss_pred EEEEeHHhhheeeEEEEC
Confidence 999999999999999993
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-56 Score=438.60 Aligned_cols=314 Identities=21% Similarity=0.241 Sum_probs=265.2
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCC--CHHHHHHHHHHHHHHhCCCCcCCCCEEEE
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKE--SLTGLAVEAASRALQMAEVNPEDVDLVLM 143 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e--~~~~la~~Aa~~aL~~agi~~~~Id~li~ 143 (401)
++++|.|+|+|+|+++++|+++.+.++.+ ++.+++||++||++.++| +..+|+.+|+++||+++|++|++||+||+
T Consensus 4 ~~v~I~g~g~ylP~~~~~~~~~~~~~~~~--~~~~~tGi~~r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~ 81 (357)
T 3s3l_A 4 ENLFVSGVAAWLPPLSTAQDAVMAGLLDP--ARSKLRGIESVTVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLH 81 (357)
T ss_dssp SSCEEEEEEEECCCEEEHHHHHHTTSSCH--HHHHHHCCCEEECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCCCCHHHHHHhcCCcH--HHHHHcCceEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 46899999999999888888887665443 345899999999987666 99999999999999999999999999999
Q ss_pred EecC---CCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCC--eEEEEEeccCCC-CCC-CCCC
Q 015758 144 CTST---PEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFR--NVLVIGGDALSR-FTD-WTDR 216 (401)
Q Consensus 144 ~t~~---~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~--~vLvv~~d~~s~-~~~-~~dr 216 (401)
+|++ ++. +..+.+|+.+||++ ++++|+|+++|+|++.||.+|.++|++|.++ +|||+++|.+|. .++ |.++
T Consensus 82 ~t~~~~~~d~-~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~~~~~~~~ 159 (357)
T 3s3l_A 82 SSLWFQGIDL-WPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNSV 159 (357)
T ss_dssp ECSSCCSSSS-SCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTTCCTTTSS
T ss_pred EeccCCCccc-ccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeccccccccccccc
Confidence 9984 443 35689999999994 7999999999999999999999999999999 999999999994 554 7665
Q ss_pred CccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHH
Q 015758 217 GSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVF 296 (401)
Q Consensus 217 ~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~ 296 (401)
++.+|||||+|+||++.+. ..+++.+.+.++|...+ +. ...+. .+|+.......+.|+++++|
T Consensus 160 -~~~lfGDGA~A~vl~~~~~-~~~i~~~~~~s~g~~~~-~~------------~~~~~--~~~~~~~~~~~~~~~g~~~~ 222 (357)
T 3s3l_A 160 -DVTMYGDGAAALVLSTRDG-FARVLSTATGVDNSLEI-LA------------RGDEP--FAPHPVEPSPVADLGTRTVR 222 (357)
T ss_dssp -SSCCBCCEEEEEEEESSCC-SEEEEEEEEEECGGGGG-GG------------TTTCC--CCSSCCSSCCCCCHHHHHHH
T ss_pred -CCcccccccEEEEEecCCC-CCeEEEEEEEEccChhh-hc------------ccCCC--CCCCccCcCCccccccchhh
Confidence 5789999999999998652 34688888888875321 11 00011 12221111224667787777
Q ss_pred H-----------HHHHHHHHHHHHHHHHcCCCcCCcCEEEe-cccCHHHHHHHHHHcCCCchhhhhcc-cccCccccChH
Q 015758 297 R-----------FAVRVVPQTIESALEKAGLTMSSIDWLLL-HQANQRIIDAVANRLDVPMERVISNL-ANYGNTSAASI 363 (401)
Q Consensus 297 ~-----------~~~~~~~~~i~~aL~~agl~~~dId~~i~-Hq~~~~i~~~i~~~lgl~~e~~~~~l-~~~Gn~~sasi 363 (401)
. ++.+.++++++++|+++|++++|||||++ ||+|.+ ++.++++||+|+||+..++ .+||||++||+
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~~~~~~GNt~aAsi 301 (357)
T 3s3l_A 223 GAELADLPDLTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWAYGRTTGHVGAGDQ 301 (357)
T ss_dssp HHHHHCCTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHHHHHHHCBCTTCHH
T ss_pred hhcccchhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHHhccccccchHhHH
Confidence 5 78899999999999999999999999995 999999 9999999999999998655 68999999999
Q ss_pred HHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 364 PLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 364 ~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
|++|++++++|++++||+|++++||+|+||++++|||.
T Consensus 302 pl~L~~~~~~g~l~~Gd~vll~~fG~G~t~~a~ll~~~ 339 (357)
T 3s3l_A 302 YAGLAHLVENALVQPGDRVLLFGGGAGYTCTAAVVEIL 339 (357)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCBTTTEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeeEEec
Confidence 99999999999999999999999999999999999994
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-55 Score=425.76 Aligned_cols=316 Identities=42% Similarity=0.706 Sum_probs=282.1
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++++|+++++.++.+++|+.+++||++|+++.++++..+|+.+|+++||+++|++|++||.|+++|
T Consensus 1 ~~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~ 80 (317)
T 1hnj_A 1 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVAT 80 (317)
T ss_dssp CEEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred CCcEEEEEEEeCCCceecHHHHHHHhCCCHHHHHHHhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 46899999999999999999999998888999999999999999988899999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|+..||++ +.++++++++|+|++.||..|.++|++|.++++||+++|.++..++|.|+.+.++|||
T Consensus 81 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~~~~d~~~~~~~Gd 159 (317)
T 1hnj_A 81 TSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGD 159 (317)
T ss_dssp SCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHSCTTCHHHHTTBCC
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCCchhcccceeecc
Confidence 9887654 4789999999995 4899999999999999999999999999999999999999998888887766789999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+. .+++...+.++|...+.+..+. +.. ++.. ...+++|+|+++|+++.+.++
T Consensus 160 GA~A~vL~~~~~--~~i~~~~~~~~g~~~~~~~~~~------------~~~--~~~~--~~~~~~~~g~~~~~~~~~~~~ 221 (317)
T 1hnj_A 160 GAGAAVLAASEE--PGIISTHLHADGSYGELLTLPN------------ADR--VNPE--NSIHLTMAGNEVFKVAVTELA 221 (317)
T ss_dssp EEEEEEEEEESS--CSEEEEEEEECGGGGGGEECCC------------CCS--SCTT--SCCSCEECHHHHHHHHHHHHH
T ss_pred ccEEEEEEecCC--CceeeEEEEEcCCCCCeEEECC------------CCC--CCCC--CCceEEecCHHHHHHHHHHHH
Confidence 999999998652 4677776666765434443221 000 0111 223578999999999999999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++++|+++|++++|||+|++||++.++++.+.+.||++++++..++.+|||+++||+|++|+++++++++++||++++
T Consensus 222 ~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll 301 (317)
T 1hnj_A 222 HIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLL 301 (317)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred EeeehhhhheeeEEEe
Q 015758 385 AGFGAGLTWGSAILRW 400 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~ 400 (401)
++||+|++|+++++||
T Consensus 302 ~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 302 EAFGGGFTWGSALVRF 317 (317)
T ss_dssp EEEETTTEEEEEEEEC
T ss_pred EEEchhheeEEEEEEC
Confidence 9999999999999998
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-55 Score=428.65 Aligned_cols=321 Identities=37% Similarity=0.553 Sum_probs=282.8
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
++++|.|+|+|+|+++++|+++++.++..++||.+++||++||++.++++..+|+.+|+++||+++|+++++||.|+++|
T Consensus 10 ~~~~I~gig~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt 89 (339)
T 1mzj_A 10 RFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVST 89 (339)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHHHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred CceEEEEEEEeCCCccccHHHHHHHhCCCHHHHHHhcCceEEEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 46899999999999999999999999888999999999999999988899999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|+.+||++ +.++++++++|+|++.||..|.++|++|.++++||+++|.++..++|.|+.++++|||
T Consensus 90 ~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~~~~d~~~~~~~Gd 168 (339)
T 1mzj_A 90 MTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTDVIDLADRSLSFLFGD 168 (339)
T ss_dssp SCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGGGSCSSCTTTTTTBCE
T ss_pred cCCCCCCChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccccccCccccccceEecc
Confidence 9888754 5789999999995 4899999999999999999999999999999999999999998888888877889999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+ ..+++...+.++|...+.+..+ . . .+.... .... ...+++|+|+++|+++.+.++
T Consensus 169 GA~A~vL~~~~--~~~i~~~~~~~~g~~~~~~~~~-g-~-~p~~~~------~~~~---~~~~~~~~g~~v~~~~~~~~~ 234 (339)
T 1mzj_A 169 GAGAAVVGPSD--VPGIGPVVRGIDGTGLGSLHMS-S-S-WDQYVE------DPSV---GRPALVMDGKRVFRWAVADVV 234 (339)
T ss_dssp EEEEEEEEEES--SCCBCCCEEEECGGGGGGEEES-C-C-HHHHTT------CSSS---CSCCEEECHHHHHHHHHHHHH
T ss_pred CceEEEEEecC--CCCeEEEEEEEcCCCCCeEEec-C-C-CCCccc------cccc---ccceEEeeCHHHHHHHHHHHH
Confidence 99999999864 2466666666776544444332 0 0 000000 0000 123588999999999999999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch-hhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME-RVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIA 383 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e-~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~il 383 (401)
++++++|+++|++++|||+|++||.|.++++.+.+.||++++ ++..++.+|||+++||+|++|+++++++++++||+++
T Consensus 235 ~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vl 314 (339)
T 1mzj_A 235 PAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSGAVPGGGPAL 314 (339)
T ss_dssp HHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 999999999999999999999999999999999999999999 9888889999999999999999999999999999999
Q ss_pred EEeeehhhhheeeEEEeC
Q 015758 384 AAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 384 l~~~G~G~s~~a~llr~~ 401 (401)
+++||+|++|+++++||.
T Consensus 315 l~~~G~G~t~~~~~l~~~ 332 (339)
T 1mzj_A 315 MIGFGAGLSYAGQALLLP 332 (339)
T ss_dssp EEEEETTTEEEEEEEECC
T ss_pred EEEEchhheeEEEEEEeC
Confidence 999999999999999994
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-55 Score=439.12 Aligned_cols=316 Identities=21% Similarity=0.302 Sum_probs=262.3
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh---CCchhh---------hhhhcCcceeEecCCCC-------------------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV---DTSDEW---------ISVRTGIRNRRVLSGKE------------------- 114 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~---~~~~~~---------i~~~~Gi~~R~~~~~~e------------------- 114 (401)
.+++|.|+|+|+|+++++|+|+.+.+ ...++| |.+++||++||++.+++
T Consensus 15 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~~r 94 (393)
T 3ov2_A 15 GPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSYKEASFDDR 94 (393)
T ss_dssp SCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSSSSCCHHHH
T ss_pred CCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccCCCCCHHHH
Confidence 46999999999999999999999874 444544 88999999999987654
Q ss_pred ------CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCe-eEeeCccChHHHHHHHHH
Q 015758 115 ------SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPL-AYDITAACSGFLLGLVSA 187 (401)
Q Consensus 115 ------~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~-~~~i~~~C~~~~~aL~~A 187 (401)
+..+|+++|+++||+++|++++|||+||++|+++...++.+.+|+++||+++... +++++++|+|++.||.+|
T Consensus 95 ~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A 174 (393)
T 3ov2_A 95 QDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIA 174 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHH
Confidence 4899999999999999999999999999999999544567999999999965443 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeccCC-CCCCCCCC-----CccccccceeEEEEEeeccCCCCCee--EEEEeecCCCCCceeee
Q 015758 188 ACHIRGGGFRNVLVIGGDALS-RFTDWTDR-----GSCILFGDAAGAVLVQACDSEDDGLI--SFDVHSDGEGGRHLNAC 259 (401)
Q Consensus 188 ~~~l~~g~~~~vLvv~~d~~s-~~~~~~dr-----~~~~lfGDGAaAvll~~~~~~~~gl~--~~~~~s~g~~~~~l~~~ 259 (401)
.++|++|.+++||||++|.+| ++.+|.|+ .++.+|||||+|+||++++. .++. .+.+.+++. ...
T Consensus 175 ~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~--~~~~~~~~~~~~~~~----~~~- 247 (393)
T 3ov2_A 175 KDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPL--EGIEKPIYEIAAAMQ----ETV- 247 (393)
T ss_dssp HHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC--TTTCCCSEEEEEEEE----EEC-
T ss_pred HHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCC--CcccCceeEEEecCc----EEe-
Confidence 999999999999999999997 67788776 36789999999999998653 2211 133333221 000
Q ss_pred ccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCc-CCcCEEEecccCHHHHHHHH
Q 015758 260 IKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTM-SSIDWLLLHQANQRIIDAVA 338 (401)
Q Consensus 260 ~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~-~dId~~i~Hq~~~~i~~~i~ 338 (401)
+..+ ... +. .+.. ....+.|+ +++|+++.+.++++++++|+++|++. +|| +|++||+|.++++.++
T Consensus 248 -p~~~--~~~---~~--~~~~---~g~~~~~~-~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~~~v~ 314 (393)
T 3ov2_A 248 -AESQ--GAV---GG--HLRA---FGWTFYFL-NQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAIIDAIE 314 (393)
T ss_dssp -TTCT--TSE---EE--EEET---TEEEEEEC-TTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHHHHHH
T ss_pred -cCCc--ccC---ce--eeeC---CceEEEEC-cHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHHHHHH
Confidence 1100 000 00 0000 01135674 89999999999999999999999997 888 9999999999999999
Q ss_pred HHcCCCchhhhh---cccccCccccChHHHHHHHHHHc----CCCCCC---CEEEEEeeehhhhheeeEEEeC
Q 015758 339 NRLDVPMERVIS---NLANYGNTSAASIPLALDEAVRS----GKVKPG---HTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 339 ~~lgl~~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~----g~~~~G---d~ill~~~G~G~s~~a~llr~~ 401 (401)
++||+++||+.. ++++||||++||+|++|++++++ |++++| |++++++||+|+||+++++||.
T Consensus 315 ~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 315 AKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSM 387 (393)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEc
Confidence 999999999975 59999999999999999999986 999999 9999999999999999999983
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-54 Score=415.54 Aligned_cols=311 Identities=40% Similarity=0.712 Sum_probs=280.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++++|+++.+.++..++|+.+++||++|++..++++..+|+.+|+++||+++|+++++||.|+++|
T Consensus 1 m~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~ 80 (313)
T 1zow_A 1 MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVAT 80 (313)
T ss_dssp CCEEEEEEEEECCSCEEEGGGGGGTSSCCHHHHHHHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred CceEEEEEEEECCCccccHHHHHHhcCCCHHHHHHhhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999998888999999999999999988999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|+.+||++ +.++++++++|+|++.||..|.++|++|.+++|||+++|.++..++|.|+..+++|||
T Consensus 81 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~d~~~~~~~gd 159 (313)
T 1zow_A 81 ATGDMPFPTVANMLQERLGTG-KVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITDLTDRSTAVLFGD 159 (313)
T ss_dssp SSCSCSSSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTCCTTCHHHHTTBCE
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccccCcccccceeeecc
Confidence 9887654 4689999999995 4899999999999999999999999999999999999999998888888777789999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+. ..+++.+.+.++|...+.+..+. | . ..++|+|++++++..+.++
T Consensus 160 Ga~A~vl~~~~~-~~~i~~~~~~~~g~~~~~~~~~~------------------~---~--~~~~~~g~~~~~~~~~~~~ 215 (313)
T 1zow_A 160 GAGAVIIGEVSE-GRGIISYEMGSDGTGGKHLYLDK------------------D---T--GKLKMNGREVFKFAVRIMG 215 (313)
T ss_dssp EEEEEEEEECST-TCEEEEEEEEECGGGGGGEEECT------------------T---T--CCEEECHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCC-CCceeEEEEEEcCCCcCeEEecC------------------C---C--CeeEeccHHHHHHHHHHHH
Confidence 999999998653 34676666666664333332211 1 0 1377899999999999999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++++|+++|++++|||+|++||.+.++++.+.+.||++++++..++.+|||+++|++|++|+++++++++++||++++
T Consensus 216 ~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~ 295 (313)
T 1zow_A 216 DASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQELKNGKLKDDDTIVL 295 (313)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred EeeehhhhheeeEEEeC
Q 015758 385 AGFGAGLTWGSAILRWG 401 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~~ 401 (401)
++||+|++|+++++||+
T Consensus 296 ~~~G~G~t~~~~~l~~~ 312 (313)
T 1zow_A 296 VGFGGGLTWGAMTIKWG 312 (313)
T ss_dssp EEEETTTEEEEEEEECC
T ss_pred EEEchhhhheEEEEEeC
Confidence 99999999999999995
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=414.15 Aligned_cols=318 Identities=42% Similarity=0.708 Sum_probs=282.8
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecC
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTST 147 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~ 147 (401)
++|.++|+|+|+++++|+++++.++..++|+.+++||++||++.++++..+|+.+|+++||+++|+++++||.|+++|++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~ 81 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNT 81 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSS
T ss_pred cEEEEEEEECCCceecHHHHHHHhCCCHHHHHHhcCceEEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCC
Confidence 58999999999999999999999888999999999999999998889999999999999999999999999999999998
Q ss_pred CCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCcccccccee
Q 015758 148 PEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 226 (401)
Q Consensus 148 ~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGA 226 (401)
+++.. ..+.+|+.+||+ +.++++++++|+|++.||..|.++|++|.++++||+++|.++++++|.|+.++++|||||
T Consensus 82 ~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~~~~d~~~~~~~GdGA 159 (322)
T 1ub7_A 82 PDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGG 159 (322)
T ss_dssp CSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTSCTTCHHHHTTBCCEE
T ss_pred CCCCCCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhccccChhhcccceeecccc
Confidence 87643 478999999999 489999999999999999999999999999999999999999888888776778999999
Q ss_pred EEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHH
Q 015758 227 GAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306 (401)
Q Consensus 227 aAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~ 306 (401)
+|+||++.+. ..+++...+.++|...+.+..+.. |.. +|...+...+++|+|+++|+++.+.++++
T Consensus 160 ~A~vL~~~~~-~~~i~~~~~~~~g~~~~~~~~~~~-----------~~~--~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 225 (322)
T 1ub7_A 160 GAAVVGKVRE-GYGFRSFVLGADGTGAKELYHACV-----------APR--LPDGTSMKNRLYMNGREVFKFAVRVMNTA 225 (322)
T ss_dssp EEEEEECCCT-TCEEEEEEEEECGGGCTTEEEESS-----------CSB--CTTSCBCCSSCEECHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCC-CCceeEEEEEEecCCCCeEEeCCC-----------CCC--CCccccccceEEecCHHHHHHHHHHHHHH
Confidence 9999998643 346777666777765554544321 110 12111112357899999999999999999
Q ss_pred HHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEe
Q 015758 307 IESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAG 386 (401)
Q Consensus 307 i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~ 386 (401)
++++|+++|++++|||+|++||.+.++++.+.+.||++++++..++.+|||+++|+++++|.++++++++++|+++++.+
T Consensus 226 i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 226 TLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVS 305 (322)
T ss_dssp HHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEE
T ss_pred HHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred eehhhhheeeEEEeC
Q 015758 387 FGAGLTWGSAILRWG 401 (401)
Q Consensus 387 ~G~G~s~~a~llr~~ 401 (401)
||.|++|+++++||.
T Consensus 306 ~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 306 FGAGLTWAAAVLTWG 320 (322)
T ss_dssp EETTTEEEEEEEECC
T ss_pred EChhheeEEEEEEeC
Confidence 999999999999993
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-54 Score=433.51 Aligned_cols=319 Identities=21% Similarity=0.260 Sum_probs=258.9
Q ss_pred cccCCeEEEEEEEEcCCCccChHHHHhhhCC------chhh---hhhhcCcceeEecCCCC-------------------
Q 015758 63 LINRGCKLVGCGSAVPTLQISNDDLAKIVDT------SDEW---ISVRTGIRNRRVLSGKE------------------- 114 (401)
Q Consensus 63 ~~~~~v~I~gig~~lP~~~v~~~~l~~~~~~------~~~~---i~~~~Gi~~R~~~~~~e------------------- 114 (401)
...|+++|.++|+|+|+++++|+|+.++++. ..+| |.+++||++||++.+++
T Consensus 27 ~~~~~v~I~gigt~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~~~~ 106 (465)
T 3e1h_A 27 AGELGLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVF 106 (465)
T ss_dssp -CCCCEEEEEEEEECCSSCCBCTHHHHHTCSSSCCCHHHHHHHHHTTTSCCCCBCCSSCTTCGGGSSSSCCCHHHHHHHH
T ss_pred CCCCCEEEEEEEEECCCcEEcHHHHHHHHHHhcccchhHHHHHHHHHhcCCceEEEeecccCcccccccCCCHHHHHHHH
Confidence 3367899999999999999999999776532 1344 78899999999985432
Q ss_pred --CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee-CccChHHHHHHHHHHHHH
Q 015758 115 --SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI-TAACSGFLLGLVSAACHI 191 (401)
Q Consensus 115 --~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i-~~~C~~~~~aL~~A~~~l 191 (401)
...+|+++|+++||+++|++|+|||+||++|+++...++.+.+|+++||+++...+|+| +++|+||+.||.+|.++|
T Consensus 107 ~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i 186 (465)
T 3e1h_A 107 MSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLC 186 (465)
T ss_dssp HHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Confidence 23699999999999999999999999999999854445679999999999654458999 799999999999999999
Q ss_pred Hc----CCCCeEEEEEeccCCCCCCC---------CCCCccccccceeEEEEEeeccCCC---CCeeEEEEeecCCCCCc
Q 015758 192 RG----GGFRNVLVIGGDALSRFTDW---------TDRGSCILFGDAAGAVLVQACDSED---DGLISFDVHSDGEGGRH 255 (401)
Q Consensus 192 ~~----g~~~~vLvv~~d~~s~~~~~---------~dr~~~~lfGDGAaAvll~~~~~~~---~gl~~~~~~s~g~~~~~ 255 (401)
++ |.+++||||++|.+|++++| .|+.++.+|||||+|+||++++... ..++ ++.. ...
T Consensus 187 ~a~~~~G~~~~vLVvg~E~~S~~~~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~~~~--~l~~----~~~ 260 (465)
T 3e1h_A 187 LGHTARGKPARILVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIY--DLLG----WEN 260 (465)
T ss_dssp HHHHHTTCCCEEEEEEEECCGGGHHHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSE--EEEE----EEE
T ss_pred hcccccCCCCEEEEEEEeecchhcCcccccccccccccccccccccceeEEEEEccCCCccccccce--eecc----ceE
Confidence 97 89999999999999988864 5677889999999999999864211 1121 1111 001
Q ss_pred eeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHH-------cCCCcCCcCEEEecc
Q 015758 256 LNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEK-------AGLTMSSIDWLLLHQ 328 (401)
Q Consensus 256 l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~-------agl~~~dId~~i~Hq 328 (401)
+..+.. +....+.... ..++.|+++++|+++.+.++++++++|++ +|++++||||+ +||
T Consensus 261 ~~~p~~-----------~~~~~~~~~~--~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~Hq 326 (465)
T 3e1h_A 261 RVIPDS-----------EHDLGFDVDP--MGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-MHP 326 (465)
T ss_dssp EECTTC-----------TTTEEEEEET--TEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-ECC
T ss_pred EEecCC-----------ccccCccccC--CCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-ecC
Confidence 111100 0000010011 12467889999999999999999999998 57999999987 999
Q ss_pred cCHHHHHHHHHHcCCCchhhh---hcccccCccccChHHHHHHHHHHc--CCCCCC----CEEEEEeeehhhhheeeEEE
Q 015758 329 ANQRIIDAVANRLDVPMERVI---SNLANYGNTSAASIPLALDEAVRS--GKVKPG----HTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 329 ~~~~i~~~i~~~lgl~~e~~~---~~l~~~Gn~~sasi~~~L~~~l~~--g~~~~G----d~ill~~~G~G~s~~a~llr 399 (401)
+|.+|++.++++||++++|+. .++++||||++||+|++|++++++ +++++| |++++++||+|+||++++||
T Consensus 327 an~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~gfG~Glt~~~~llr 406 (465)
T 3e1h_A 327 GGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGINVEMCMLK 406 (465)
T ss_dssp SSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEEEETTTEEEEEEEE
T ss_pred CChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEEEhHHHhhhheeeE
Confidence 999999999999999999995 467899999999999999999988 688888 99999999999999999999
Q ss_pred eC
Q 015758 400 WG 401 (401)
Q Consensus 400 ~~ 401 (401)
|.
T Consensus 407 ~~ 408 (465)
T 3e1h_A 407 RR 408 (465)
T ss_dssp EC
T ss_pred Ee
Confidence 93
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-54 Score=425.83 Aligned_cols=314 Identities=21% Similarity=0.264 Sum_probs=249.7
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh---CCch---------hhhhhhcCcceeEecCCCC------------------
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV---DTSD---------EWISVRTGIRNRRVLSGKE------------------ 114 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~---~~~~---------~~i~~~~Gi~~R~~~~~~e------------------ 114 (401)
..+++|.|+|+|+|+++++|+|+.+.+ ...+ +||.+++||++||++.+++
T Consensus 8 ~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~~ 87 (387)
T 3oit_A 8 DGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDRDAPSLDA 87 (387)
T ss_dssp SSCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTCTTSCCHHH
T ss_pred CCCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCccccccCCCCHHH
Confidence 346999999999999999999999875 2222 3899999999999997765
Q ss_pred -------CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCe-eEeeCccChHHHHHHHH
Q 015758 115 -------SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPL-AYDITAACSGFLLGLVS 186 (401)
Q Consensus 115 -------~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~-~~~i~~~C~~~~~aL~~ 186 (401)
+..+|+.+|+++||+++|++++|||+||++|+++...++.+.+|+.+||+++... +++++++|+|++.||.+
T Consensus 88 r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~ 167 (387)
T 3oit_A 88 RLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRL 167 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHH
Confidence 5899999999999999999999999999999999444567999999999965443 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeccCC-CCCCCCCC-----CccccccceeEEEEEeeccCC-CCCeeEEEEeecCCCCCceeee
Q 015758 187 AACHIRGGGFRNVLVIGGDALS-RFTDWTDR-----GSCILFGDAAGAVLVQACDSE-DDGLISFDVHSDGEGGRHLNAC 259 (401)
Q Consensus 187 A~~~l~~g~~~~vLvv~~d~~s-~~~~~~dr-----~~~~lfGDGAaAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~ 259 (401)
|.++|++|..++||||++|.+| .+.+|.|+ .++.+|||||+|+||++++.. ...+ +.+.+.+. ...+
T Consensus 168 A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~--~~~~~~~~----~~~p 241 (387)
T 3oit_A 168 AKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPL--FEIVSAAQ----TIIP 241 (387)
T ss_dssp HHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCCSSCCCC--EEEEEEEE----EECT
T ss_pred HHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCCcccCCc--eEEEeccc----EEeC
Confidence 9999999999999999999997 77788776 357899999999999986421 1112 23332211 0001
Q ss_pred ccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHc----CCCcCCcC--EEEecccCHHH
Q 015758 260 IKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKA----GLTMSSID--WLLLHQANQRI 333 (401)
Q Consensus 260 ~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~a----gl~~~dId--~~i~Hq~~~~i 333 (401)
..+ ..+ +. .+... . ..++|+ +++++++.+.++++++++|+++ |++ |+| +|++||+|.++
T Consensus 242 --~~~--~~~---~~--~~~~~--g-~~~~~~-~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~n~~i 306 (387)
T 3oit_A 242 --ESD--HAL---NM--RFTER--R-LDGVLG-RQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPGSSTI 306 (387)
T ss_dssp --TCT--TSE---EE--EECSS--S-EEEEEC-TTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCCCHHH
T ss_pred --CCh--hhc---cc--eeecC--C-eEEEEC-cHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCCCHHH
Confidence 000 000 00 01111 1 135665 8999999999999999999999 987 555 99999999999
Q ss_pred HHHHHHHcCCCchhhhh---cccccCccccChHHHHHHHHHHcCCCCCC------CEEEEEeeehhhhheeeEEEe
Q 015758 334 IDAVANRLDVPMERVIS---NLANYGNTSAASIPLALDEAVRSGKVKPG------HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 334 ~~~i~~~lgl~~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~g~~~~G------d~ill~~~G~G~s~~a~llr~ 400 (401)
++.++++||++++|+.. ++++||||++||+|++|++++++ ++++| |++++++||+|+||+++++|+
T Consensus 307 l~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~ 381 (387)
T 3oit_A 307 MDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHA 381 (387)
T ss_dssp HHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEEecccceeeeeeeEe
Confidence 99999999999999975 49999999999999999998876 78888 899999999999999999997
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=405.12 Aligned_cols=308 Identities=44% Similarity=0.755 Sum_probs=277.8
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++++++++.+.++..++|+.+++||++|+++.+ ++..+|+.+|++++|+++|+++++||.|++++
T Consensus 1 m~~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~-~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~ 79 (309)
T 2ebd_A 1 MGTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIAKE-ETITYMATQAAKEALREANLSPEELDLIILAT 79 (309)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEECSS-CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEEC
T ss_pred CceEEEEEEEECCCceEcHHHHHHHcCCCHHHHHHHhCceeeeecCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999998888999999999999999865 89999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|+.+||++ ..++++++++|+|++.||..|.++|++|.++++||+++|.++..++|.++..+++|||
T Consensus 80 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~~~~~~~~~~~~gd 158 (309)
T 2ebd_A 80 LTPQKRFPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGD 158 (309)
T ss_dssp SSCSSSSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGTCCTTCTTTTTTBCE
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccccCccchhhcccccc
Confidence 9887654 4789999999996 4799999999999999999999999999999999999999998888887777789999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+. ..+++...+.++|...+++.. |. ..+++|+|++++++..+.++
T Consensus 159 GaaA~vL~~~~~-~~~i~~~~~~~~g~~~~~~~~--------------------p~----~~~~~~~g~~~~~~~~~~~~ 213 (309)
T 2ebd_A 159 GAGAVVVTRSED-KSDILATRMYAEGSLEELLHA--------------------DN----CGYIRMKGRELFKVAVRSME 213 (309)
T ss_dssp EEEEEEEEECSS-SCEEEEEEEEECGGGGGGEEE--------------------CT----TCCEEECHHHHHHHHHHHHH
T ss_pred ccEEEEEEecCC-CCceeEEEEEecCCccceeEe--------------------CC----CCeEEEccHHHHHHHHHHHH
Confidence 999999998653 346766666666643333321 11 01367899999999999999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++++|+++|++++|||++++||.+.++++.+.+.||++++++..++.+|||+++|+++++|+++++++++++||++++
T Consensus 214 ~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~ 293 (309)
T 2ebd_A 214 EVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILM 293 (309)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred EeeehhhhheeeEEEe
Q 015758 385 AGFGAGLTWGSAILRW 400 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~ 400 (401)
++||+|++|+++++||
T Consensus 294 ~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 294 TAMGGGLTWGAVLLRY 309 (309)
T ss_dssp EEEETTTEEEEEEEEC
T ss_pred EEEchhhhhEEEEEEC
Confidence 9999999999999998
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-52 Score=408.56 Aligned_cols=321 Identities=35% Similarity=0.532 Sum_probs=279.5
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
++++|.++|+|+|+++++|+++++.++..++||.+++||++|++..++++..+|+.+|+++||+++|+++++||.|+++|
T Consensus 11 ~~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t 90 (335)
T 1u6e_A 11 RSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTT 90 (335)
T ss_dssp SCEEEEEEEEECCSEEEEHHHHTTSSSCCHHHHHHHHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred CceEEEEEEEECCCceecHHHHHHHhCCCHHHHHHhcCCceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 36899999999999999999999998888999999999999999988899999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. ..+.+|+.+||++ +.++++++++|+|++.||..|.++|++|.+++|||+++|.+++.++|.|+.++++|||
T Consensus 91 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~d~~~~~~~gD 169 (335)
T 1u6e_A 91 NTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFAD 169 (335)
T ss_dssp SCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGGGCCTTCTTTTTTBCE
T ss_pred CCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcccccccCccccccceEecc
Confidence 9887654 5689999999995 6899999999999999999999999999999999999999999889888878889999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+. .+++...+.++|...+.+..+.. . . + +..-|.. ...+++|+|++++++..+.++
T Consensus 170 GA~A~vl~~~~~--~~i~~~~~~~~g~~~~~~~~~~~---~---~---~-~~~~~~~--~~~~~~~~g~~~~~~~~~~~~ 235 (335)
T 1u6e_A 170 GAAAVVVGETPF--QGIGPTVAGSDGEQADAIRQDID---W---I---T-FAQNPSG--PRPFVRLEGPAVFRWAAFKMG 235 (335)
T ss_dssp EEEEEEEEECSS--CCBCCCEEEECGGGGGGEEESSC---H---H---H-HHTSTTS--CCCCEEECHHHHHHHHHHHHH
T ss_pred ccEEEEEEecCC--CCeeEEEEEEcCCcccceeecCC---c---c---C-cCCCccC--ccceEEEcCHHHHHHHHHHHH
Confidence 999999998652 34544445555543333332100 0 0 0 0000111 112478999999998889999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch-hhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME-RVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIA 383 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e-~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~il 383 (401)
++++++|+++|++++|||+|++||.+.++++.+.+.||++++ ++..++.+|||+++|++|++|+++++++++++||+++
T Consensus 236 ~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l 315 (335)
T 1u6e_A 236 DVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLAL 315 (335)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 999999999999999999999999999999999999999998 8877889999999999999999999999999999999
Q ss_pred EEeeehhhhheeeEEEeC
Q 015758 384 AAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 384 l~~~G~G~s~~a~llr~~ 401 (401)
+++||.|++|++++|||+
T Consensus 316 ~~~~G~G~t~~~~vl~~~ 333 (335)
T 1u6e_A 316 LIGYGAGLSYAAQVVRMP 333 (335)
T ss_dssp EEEEETTTEEEEEEEECC
T ss_pred EEEEehhheeEEEEEEeC
Confidence 999999999999999994
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-53 Score=420.06 Aligned_cols=314 Identities=19% Similarity=0.216 Sum_probs=259.2
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh-C-C----------chhhhhhhcCcceeEecCCC---------------------
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV-D-T----------SDEWISVRTGIRNRRVLSGK--------------------- 113 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~-~-~----------~~~~i~~~~Gi~~R~~~~~~--------------------- 113 (401)
+++|.|+|+|+|+++++|+|+++.+ . . ..+||.+++||++||++.++
T Consensus 12 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~r~ 91 (387)
T 3a5r_A 12 LATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSLNVRH 91 (387)
T ss_dssp CEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCHHHHH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCHHHHH
Confidence 5899999999999999999999875 1 1 14689999999999998655
Q ss_pred ----CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCe-eEeeCccChHHHHHHHHHH
Q 015758 114 ----ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPL-AYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 114 ----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~-~~~i~~~C~~~~~aL~~A~ 188 (401)
++..+|+.+|+++||+++|+++++||+||++|++++..++.+.+|+++||++.... +++++++|+|++.||.+|.
T Consensus 92 ~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~ 171 (387)
T 3a5r_A 92 KMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAK 171 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHH
Confidence 57899999999999999999999999999999987544567999999999964453 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCC-CCCCCC-----CCccccccceeEEEEEeeccCCCCCeeE--EEEeecCCCCCceeeec
Q 015758 189 CHIRGGGFRNVLVIGGDALSR-FTDWTD-----RGSCILFGDAAGAVLVQACDSEDDGLIS--FDVHSDGEGGRHLNACI 260 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~-~~~~~d-----r~~~~lfGDGAaAvll~~~~~~~~gl~~--~~~~s~g~~~~~l~~~~ 260 (401)
++|++|.+++|||+++|.+|. +.+|.| +.++.+|||||+|+||++.+. .++.. +.+.+++. +..+
T Consensus 172 ~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~--~~~~~~~~~l~~~~~----~~~p- 244 (387)
T 3a5r_A 172 DIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPD--LTVERPIFELVSTAQ----TIVP- 244 (387)
T ss_dssp HHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCC--TTTCCCCEEEEEEEE----EECT-
T ss_pred HHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCC--ccccCCceEEEeeeE----EEeC-
Confidence 999999999999999999987 556653 335679999999999997642 23332 44444331 1111
Q ss_pred cCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCC-cCCcCEEEecccCHHHHHHHHH
Q 015758 261 KGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLT-MSSIDWLLLHQANQRIIDAVAN 339 (401)
Q Consensus 261 ~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~-~~dId~~i~Hq~~~~i~~~i~~ 339 (401)
... .... + .++. .. ..++| ++++|+++.+.++++++++|+++|++ .+|| +|++||+|.++++.+++
T Consensus 245 -~~~--~~~~----~-~~~~--~g-~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~ 311 (387)
T 3a5r_A 245 -ESH--GAIE----G-HLLE--SG-LSFHL-YKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILDQVTA 311 (387)
T ss_dssp -TCT--TSEE----E-EEET--TE-EEEEE-CTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHH
T ss_pred -CCh--HhcC----c-eEcC--CC-eEEEe-cchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHHHHHH
Confidence 000 0000 0 0111 11 13566 78999999999999999999999998 8899 89999999999999999
Q ss_pred HcCCCchhhhh---cccccCccccChHHHHHHHHHHcCCCCCC--------CEEEEEeeehhhhheeeEEEeC
Q 015758 340 RLDVPMERVIS---NLANYGNTSAASIPLALDEAVRSGKVKPG--------HTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 340 ~lgl~~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~g~~~~G--------d~ill~~~G~G~s~~a~llr~~ 401 (401)
+||++++|+.. ++++||||++||+|++|++++++++ ++| |+|++++||+|++|+++++||.
T Consensus 312 ~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~ 383 (387)
T 3a5r_A 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL-ENGQATTGEGLEWGVLFGFGPGITVETVVLRSV 383 (387)
T ss_dssp HHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCcceeeehhheec
Confidence 99999999874 5899999999999999999999886 777 9999999999999999999994
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-53 Score=418.71 Aligned_cols=306 Identities=19% Similarity=0.164 Sum_probs=267.6
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEE
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMC 144 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 144 (401)
.|+++|.++|+|+|+++++|+|+++.++.+++|+...+||++|+++.++|+..+|+++|+++||+++| |++||+||++
T Consensus 5 ~m~v~I~~~g~y~P~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~ 82 (388)
T 3v4n_A 5 SMTIGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAILTKED--KEAIDMVIVG 82 (388)
T ss_dssp SCCEEEEEEEEECCSEEEEHHHHHHHTTSCTHHHHTTTCCCEEECCCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEE
T ss_pred ceeEEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHHHhCceEEEECCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEE
Confidence 47899999999999999999999999998999999999999999998999999999999999999996 9999999999
Q ss_pred ecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCcccccc
Q 015758 145 TSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFG 223 (401)
Q Consensus 145 t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfG 223 (401)
|+++++.. +.+.+|+++||++++++++|++++|+|++.||.+|..+|++|..++||||++|.++..++|.+ ..+||
T Consensus 83 t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~~~~~~---~~lfG 159 (388)
T 3v4n_A 83 TESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGLNSGG---EPTQG 159 (388)
T ss_dssp CSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCCTTCTT---GGGCE
T ss_pred eccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcccCCCCC---CCccc
Confidence 99998754 579999999999756899999999999999999999999999999999999999998888766 37999
Q ss_pred ceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 224 DAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 224 DGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
|||+|+||++++ +++.+...+++...+.+ ..+ .+.... +..|+|+.+++++.+.+
T Consensus 160 DGA~A~ll~~~~----~il~~~~~~~~~~~~~~----------df~---------~p~~~~--~~~~~g~~~~~~~~~~~ 214 (388)
T 3v4n_A 160 AGAVAMLVSSEP----RILALKEDNVMLTQDIY----------DFW---------RPTGHP--YPMVDGPLSNETYIQSF 214 (388)
T ss_dssp EEEEEEEEEESC----SSEEECSCCEEEECCCC----------SEE---------CBTTCS--SCEECHHHHHHHHHHHH
T ss_pred cceeEEEeecCC----CceEEeccccccchhcc----------ccc---------cCCCCC--CceeccHhHHHHHHHHH
Confidence 999999999843 45555433332111111 001 111111 35789999999999999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccC--------HHHH----HHHHHHcCCCchhhhhcccccCccccChHHHHHHHHH
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQAN--------QRII----DAVANRLDVPMERVISNLANYGNTSAASIPLALDEAV 371 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~--------~~i~----~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l 371 (401)
+++++++|+++|++++|||+|++||++ .+++ +.+.++|+++.+++..++++||||++||+|++|++++
T Consensus 215 ~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 215 AQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEESIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp HHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCHHHHhhHHHhcCchHHHHHHHHHHHHH
Confidence 999999999999999999999999955 5556 7788999999999999999999999999999999999
Q ss_pred Hc-CCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 372 RS-GKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 372 ~~-g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
++ +++++||+|++++||+|+++....+++
T Consensus 295 ~~~g~~~~Gd~ill~s~GsG~~ae~~~~~v 324 (388)
T 3v4n_A 295 ENATTLTAGNQIGLFSYGSGAVAEFFTGEL 324 (388)
T ss_dssp HHCSSCCTTCEEEEEEEETTTEEEEEEEEE
T ss_pred HhcCcCCCCCEEEEEEecCcceeEEEEEEE
Confidence 98 899999999999999999999988886
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-52 Score=413.10 Aligned_cols=312 Identities=21% Similarity=0.235 Sum_probs=262.2
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCc---------hhhhhhhcCcceeEe-cCC----------------------C
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTS---------DEWISVRTGIRNRRV-LSG----------------------K 113 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~---------~~~i~~~~Gi~~R~~-~~~----------------------~ 113 (401)
|.++|.++|+|+|+++++|+++.+.++.. .+||.+++||++||+ +.+ +
T Consensus 31 ~~~~I~~ig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~a~~~~~~~~~~~~~p~~~~~r~~~~~ 110 (393)
T 1ted_A 31 TVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFY 110 (393)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHHHH
T ss_pred cccEEEEeeeeCCCcccCHHHHHHHHHHhcccccHHHHHHHHHHhCCcCcceeeecChHhcccccccCCCCHHHHHHHHh
Confidence 56899999999999999999999887643 479999999999999 764 3
Q ss_pred CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee-CccChHHHHHHHHHHHHHH
Q 015758 114 ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI-TAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 114 e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i-~~~C~~~~~aL~~A~~~l~ 192 (401)
++..+|+.+|+++||+++|+++++||.||++|++++..++.+.+|+.+||++..++++++ +++|+|++.||.+|.++|+
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~ 190 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVR 190 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999885444678999999999755778998 8999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCCC-CCCC---ccccccceeEEEEEeeccCC---CCCe---eEEEEe--ecCCCCCceeeec
Q 015758 193 GGGFRNVLVIGGDALSRFTDW-TDRG---SCILFGDAAGAVLVQACDSE---DDGL---ISFDVH--SDGEGGRHLNACI 260 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~~~~~-~dr~---~~~lfGDGAaAvll~~~~~~---~~gl---~~~~~~--s~g~~~~~l~~~~ 260 (401)
+|.+++|||+++|.++..++| .++. ++++|||||+|+||++.+.. +.++ .+.... +++. .....
T Consensus 191 ~G~~~~vLv~g~e~~s~~~~~~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~i~~~~~~~~~d~~--~~~~~-- 266 (393)
T 1ted_A 191 AHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTE--DGIVL-- 266 (393)
T ss_dssp HSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCT--TSEEE--
T ss_pred cCCCCEEEEEEEEeccccCCCCCCHHHhhhhhhhcCccEEEEEecCCCccccCcceeeeeccceEEcCCch--hhccc--
Confidence 999999999999999987776 4443 26799999999999986521 1222 111111 1111 00000
Q ss_pred cCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHH
Q 015758 261 KGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANR 340 (401)
Q Consensus 261 ~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~ 340 (401)
..+. .. +..++|+++++++.+.++++++++|+++|++++|||+|++||+|.++++.++++
T Consensus 267 ----------------~~~~--~g--~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~d~~~~~ 326 (393)
T 1ted_A 267 ----------------GVNH--NG--ITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRS 326 (393)
T ss_dssp ----------------EEET--TE--EEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHH
T ss_pred ----------------eecC--CC--eEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHHHHHHHH
Confidence 0110 01 123468899999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhh---hcccccCccccChHHHHHHHHHHcCCC-CCCCEEEEEeeehhhhheeeEEEeC
Q 015758 341 LDVPMERVI---SNLANYGNTSAASIPLALDEAVRSGKV-KPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 341 lgl~~e~~~---~~l~~~Gn~~sasi~~~L~~~l~~g~~-~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
||++++|+. .++.+||||++||+|++|+++++++++ ++||+|++++||+|++|+++++||.
T Consensus 327 lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 327 LGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp HTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheeec
Confidence 999999985 478999999999999999999999999 5999999999999999999999993
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-52 Score=418.83 Aligned_cols=316 Identities=20% Similarity=0.269 Sum_probs=259.2
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCC------------chhhhhhhcCcceeEecCCC-------------------
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDT------------SDEWISVRTGIRNRRVLSGK------------------- 113 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~------------~~~~i~~~~Gi~~R~~~~~~------------------- 113 (401)
.++++|.++|+|+|+++++|+|+.+.+.. ..+||.+++||++||++.++
T Consensus 36 ~~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~~ 115 (413)
T 1xes_A 36 DGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLD 115 (413)
T ss_dssp CSCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSSSCCHH
T ss_pred CCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccccCCCHH
Confidence 45789999999999999999999987521 14689999999999998654
Q ss_pred -------CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCC-eeEeeCccChHHHHHHH
Q 015758 114 -------ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNP-LAYDITAACSGFLLGLV 185 (401)
Q Consensus 114 -------e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~-~~~~i~~~C~~~~~aL~ 185 (401)
++..+|+.+|+++||+++|+++++||+||++|++++..+..+.+|+.+||++... ++++++++|+|++.||.
T Consensus 116 ~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~ 195 (413)
T 1xes_A 116 ARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLR 195 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecCccHHHHHHHH
Confidence 3789999999999999999999999999999999854456789999999996444 38999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeccCCC-CCCCCC-----CCccccccceeEEEEEeeccCCCCCeeE--EEEeecCCCCCcee
Q 015758 186 SAACHIRGGGFRNVLVIGGDALSR-FTDWTD-----RGSCILFGDAAGAVLVQACDSEDDGLIS--FDVHSDGEGGRHLN 257 (401)
Q Consensus 186 ~A~~~l~~g~~~~vLvv~~d~~s~-~~~~~d-----r~~~~lfGDGAaAvll~~~~~~~~gl~~--~~~~s~g~~~~~l~ 257 (401)
+|.++|++|.+++|||+++|.+|. +.+|.+ +.++++|||||+|+||++.+. .++.. +.+.+++. +.
T Consensus 196 ~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~--~~~~~~~~~l~~~~~----~~ 269 (413)
T 1xes_A 196 MAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPI--PQVEKACFEIVWTAQ----TV 269 (413)
T ss_dssp HHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC--TTTSCCSEEEEEEEE----EE
T ss_pred HHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCC--ccccCCceEEEeeee----EE
Confidence 999999999999999999999997 556654 234679999999999997642 24332 34444331 11
Q ss_pred eeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCC-cCCcCEEEecccCHHHHHH
Q 015758 258 ACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLT-MSSIDWLLLHQANQRIIDA 336 (401)
Q Consensus 258 ~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~-~~dId~~i~Hq~~~~i~~~ 336 (401)
.+ ..+ .... + .++. .. ..++| ++++|+++.+.++++++++|+++|++ .+|| +|++||+|.++++.
T Consensus 270 ~p--~~~--~~~~----~-~~~~--~g-~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~ 335 (413)
T 1xes_A 270 VP--NSE--GAIG----G-KVRE--VG-LTFQL-KGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAILDR 335 (413)
T ss_dssp CT--TCT--TTEE----E-EEET--TE-EEEEE-CTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHH
T ss_pred cC--CCh--hhcC----c-EEec--Cc-eEEEe-cccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHHHHHH
Confidence 11 100 0000 0 0111 11 13566 78999999999999999999999998 8888 89999999999999
Q ss_pred HHHHcCCCchhhhh---cccccCccccChHHHHHHHHHHcCCCCCC--------CEEEEEeeehhhhheeeEEEeC
Q 015758 337 VANRLDVPMERVIS---NLANYGNTSAASIPLALDEAVRSGKVKPG--------HTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 337 i~~~lgl~~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~g~~~~G--------d~ill~~~G~G~s~~a~llr~~ 401 (401)
++++||+++||+.. ++++||||++||+|++|++++++++ ++| |++++++||+|++|++++|||.
T Consensus 336 ~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~ 410 (413)
T 1xes_A 336 VEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSV 410 (413)
T ss_dssp HHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEeEEEEEec
Confidence 99999999999864 5899999999999999999999876 666 9999999999999999999993
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-52 Score=413.57 Aligned_cols=310 Identities=20% Similarity=0.242 Sum_probs=260.3
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCCc------h---hhhhhhcCcceeEecCC-----------------CCCHHHHHH
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDTS------D---EWISVRTGIRNRRVLSG-----------------KESLTGLAV 121 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~~------~---~~i~~~~Gi~~R~~~~~-----------------~e~~~~la~ 121 (401)
++|+++|+|+|+++++|+++++.++.. + +||.+++||++||++.+ +++..+|+.
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la~ 89 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRVP 89 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhhHHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHHH
Confidence 899999999999999999999877543 2 56889999999999866 677899999
Q ss_pred HHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee-CccChHHHHHHHHHHHHHHcCCCCeEE
Q 015758 122 EAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI-TAACSGFLLGLVSAACHIRGGGFRNVL 200 (401)
Q Consensus 122 ~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i-~~~C~~~~~aL~~A~~~l~~g~~~~vL 200 (401)
+|+++||+++|+++++||.||++|++++..+..+.+|+.+||++.+++++++ +++|+|++.||.+|.++|++|.+++||
T Consensus 90 ~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vL 169 (382)
T 1u0m_A 90 AVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANAL 169 (382)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEE
T ss_pred HHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEE
Confidence 9999999999999999999999999885445679999999999655799999 899999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCC--c---cccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcc
Q 015758 201 VIGGDALSRFTDWTDRG--S---CILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSV 275 (401)
Q Consensus 201 vv~~d~~s~~~~~~dr~--~---~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~ 275 (401)
|+++|.++..++|.|+. + .++|||||+|+||++.+..+..+++......+++.+.....
T Consensus 170 v~g~e~~s~~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~g~~i~~~~~~~~~~~~~~~~~~---------------- 233 (382)
T 1u0m_A 170 IVACEFCSLCYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGTGVRLERNGSYLIPKTEDWIMYD---------------- 233 (382)
T ss_dssp EEEEEEGGGGCCTTCCSHHHHHHHHHBCEEEEEEEEETTTCSEEEEEEEEEEECSSCTTTEEEE----------------
T ss_pred EEEEeccchhcCcccCCHHHhhccchhcCCcEEEEEeccCCCCcEEEEeeeEecCChHHhcCce----------------
Confidence 99999999888887754 2 57999999999999754211224443332222211111100
Q ss_pred cccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhh---hcc
Q 015758 276 LAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVI---SNL 352 (401)
Q Consensus 276 ~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~---~~l 352 (401)
.+.. .+ .+.+ +++++++..+.++ +++++|+++|++++|||+|++||+|.++++.++++||++++|+. .++
T Consensus 234 --~~~~--g~-~~~~-~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~ 306 (382)
T 1u0m_A 234 --VKAT--GF-HFLL-DKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATL 306 (382)
T ss_dssp --EETT--EE-EEEE-CTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHH
T ss_pred --ecCC--ce-EEEe-CcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 1100 00 1222 4667777778889 99999999999999999999999999999999999999999985 478
Q ss_pred cccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 353 ANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 353 ~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
.+||||++||+|++|+++++++++++||++++++||+|++|++++|||
T Consensus 307 ~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 307 TEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp HHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEEEEETTTEEEEEEEEE
T ss_pred HHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEEEEcccceeEEEEEEE
Confidence 999999999999999999999999999999999999999999999999
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=407.67 Aligned_cols=313 Identities=19% Similarity=0.238 Sum_probs=259.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCC----------chhhhhhhcCcceeEecCCC----------------------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDT----------SDEWISVRTGIRNRRVLSGK---------------------- 113 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~----------~~~~i~~~~Gi~~R~~~~~~---------------------- 113 (401)
++++|+|+|+|+|+++++|+++++.++. ..+||.+++||++||++.++
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQF 91 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHHH
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHHHHHHHHH
Confidence 5689999999999999999999987632 23678899999999998776
Q ss_pred -CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHH
Q 015758 114 -ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHI 191 (401)
Q Consensus 114 -e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l 191 (401)
++..+|+++|+++||+++|++|++||.||++|++++..++.+.+|+.+||++.++++++++ ++|+|++.||.+|.++|
T Consensus 92 ~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 92 KKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999998865556799999999996557999996 89999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCC-CCCCCC---ccccccceeEEEEEeeccCC-CCCeeEEEEeecCCCCCceeeeccCCCcc
Q 015758 192 RGGGFRNVLVIGGDALSRFT-DWTDRG---SCILFGDAAGAVLVQACDSE-DDGLISFDVHSDGEGGRHLNACIKGNQTN 266 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~~-~~~dr~---~~~lfGDGAaAvll~~~~~~-~~gl~~~~~~s~g~~~~~l~~~~~~~~~~ 266 (401)
++|.+++|||+++|.++..+ +|.|+. ++++|||||+|+||++.+.. +.+++ .+.+++. ...+ +..
T Consensus 172 ~~g~~~~vLv~g~e~~s~~~~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~--~l~~~g~----~~~~--~~~-- 241 (374)
T 2h84_A 172 KASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLY--EVMCSIN----RSFP--NTE-- 241 (374)
T ss_dssp TTCTTCEEEEEEEECCGGGCCCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCCCE--EEEEEEE----EECS--SCT--
T ss_pred HcCCCCEEEEEEEEecchhhcCCCCHHHHhhhhhhccCcEEEEEecCCCcccCCce--eEEeeee----EEeC--CCc--
Confidence 99999999999999999866 777764 36799999999999986531 12332 3333321 0000 000
Q ss_pred cccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcC------CCcCCcCEEEecccCHHHHHHHHHH
Q 015758 267 DALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAG------LTMSSIDWLLLHQANQRIIDAVANR 340 (401)
Q Consensus 267 ~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~ag------l~~~dId~~i~Hq~~~~i~~~i~~~ 340 (401)
... .+ .... ..+ .+. .++++++++.+.++++++++|+++| ++++|||+| +||+|.++++.++++
T Consensus 242 ~~~----~~-~~~~--~g~-~~~-~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~~~~ 311 (374)
T 2h84_A 242 NAM----VW-DLEK--EGW-NLG-LDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNIENS 311 (374)
T ss_dssp TSE----EE-EEET--TEE-EEE-ECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHHHHH
T ss_pred ccc----ee-EEec--CcE-EEE-eCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHHHHHH
Confidence 000 00 0000 111 122 4678999888999999999999999 999999999 999999999999999
Q ss_pred cCCCchhhh---hcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 341 LDVPMERVI---SNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 341 lgl~~e~~~---~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
||++++|+. .++.+||||++||+|++|++++++++ +||+|++++||+|++|+++++||
T Consensus 312 lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~Gd~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 312 LGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LPTYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp TTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CCCeEEEEEeccchhhhhhhhee
Confidence 999999986 46799999999999999999999887 89999999999999999999999
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-51 Score=407.95 Aligned_cols=309 Identities=21% Similarity=0.208 Sum_probs=254.2
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCC-----c--h--hhhhhhcCcceeEecCCC-----------------------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDT-----S--D--EWISVRTGIRNRRVLSGK----------------------- 113 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~-----~--~--~~i~~~~Gi~~R~~~~~~----------------------- 113 (401)
|.++|.++|+++|++.++++++.+++.. . + .+|.+++||++||+.-+.
T Consensus 25 m~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (413)
T 3v7i_A 25 MAAYLCAPAVIHGEHSVETREIVEEVRGRHPHAPWAPRIDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAREALVRDG 104 (413)
T ss_dssp CCEEEECCEEEECSEEEEHHHHHHHHHHHCSSCSSGGGHHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHHHHC----
T ss_pred CCeEEEeeEeeCCCcccCHHHHHHHHHHhcccchhHHHHHHHHHhCCcCeeeeecCHHHhcccccccccccccccccccc
Confidence 6799999999999999999999886521 1 1 357788999999987541
Q ss_pred ------------------------------CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcC
Q 015758 114 ------------------------------ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALG 163 (401)
Q Consensus 114 ------------------------------e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lG 163 (401)
++..+|+.+|+++||+++|++++|||+||++|++++..++.+.+|+.+||
T Consensus 105 ~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 184 (413)
T 3v7i_A 105 FTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLP 184 (413)
T ss_dssp --CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTT
T ss_pred cchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhC
Confidence 23568999999999999999999999999999998655568999999999
Q ss_pred CCCCCeeEee-CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCc-----cccccceeEEEEEeeccCC
Q 015758 164 CKNNPLAYDI-TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGS-----CILFGDAAGAVLVQACDSE 237 (401)
Q Consensus 164 l~~~~~~~~i-~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~-----~~lfGDGAaAvll~~~~~~ 237 (401)
+++++.++++ +++|+|++.||.+|.++|++|+.++||||++|.+|..++|.|+.. +.+|||||+|+||++++..
T Consensus 185 l~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~~~~d~~~~~lv~~~LFGDGAaAvvl~~~~~~ 264 (413)
T 3v7i_A 185 LRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQPADDTLESLIVRLLFADTAVAAVVTGRPRP 264 (413)
T ss_dssp CCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGCCSSCCSTTHHHHHHHBCCEEEEEEEESSCCT
T ss_pred CCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccccCccccchhhhhcceeeccccEEEEEEecCCC
Confidence 9766899999 899999999999999999999999999999999999999988866 7899999999999986532
Q ss_pred CCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHH-----
Q 015758 238 DDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALE----- 312 (401)
Q Consensus 238 ~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~----- 312 (401)
+.+ +.+...+ .... ++.+ ..+. + +..+ ....+.|+++ ++. +++.++++++++|+
T Consensus 265 ~~~---~~l~~~~----~~~~--p~~~--~~~~----~-~~~~---~g~~~~m~~~-v~~-~v~~~~~~i~~~L~~~~~~ 323 (413)
T 3v7i_A 265 ESV---LRLDAAW----HHTL--PGTR--DLHR----L-ETRA---DGTHFVMDRR-GPR-AVQETVTAMWEWLRVRYED 323 (413)
T ss_dssp TEE---EEEEEEE----EEEC--TTCT--TSEE----E-EEET---TEEEEEECTT-HHH-HHHHHHHHHHHHHHHHTSS
T ss_pred CCC---EEEEccc----cEEe--CCCc--cccC----c-cccC---CceEEEECcH-HHH-HHHHHHHHHHHHHhhcccc
Confidence 222 2232111 1111 1110 0000 0 0111 1124678876 664 56669999999999
Q ss_pred -HcCCCcCCcCEEEecccCHHHHHHHHHHcC--CCchhh---hhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEe
Q 015758 313 -KAGLTMSSIDWLLLHQANQRIIDAVANRLD--VPMERV---ISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAG 386 (401)
Q Consensus 313 -~agl~~~dId~~i~Hq~~~~i~~~i~~~lg--l~~e~~---~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~ 386 (401)
++|++ ||+|++||+|.++++.++++|| +++||+ +.+++ ||||++||+|++|++++ ++++++||++++++
T Consensus 324 ~~~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~-~~~~~~Gd~vll~~ 398 (413)
T 3v7i_A 324 DPSSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH-DAGQKTGSRAVLYA 398 (413)
T ss_dssp SCTTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-HHCCCTTCEEEEEE
T ss_pred ccCCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-hCCCCCCCEEEEEE
Confidence 89988 9999999999999999999999 999998 67999 99999999999999999 67899999999999
Q ss_pred eehhhhheeeEEEe
Q 015758 387 FGAGLTWGSAILRW 400 (401)
Q Consensus 387 ~G~G~s~~a~llr~ 400 (401)
||+|+||+++++||
T Consensus 399 fG~Glt~~~~ll~w 412 (413)
T 3v7i_A 399 AAPGLTATALEGEW 412 (413)
T ss_dssp EETTTEEEEEEEEE
T ss_pred ECHHHhHhhhheEe
Confidence 99999999999999
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=402.06 Aligned_cols=306 Identities=16% Similarity=0.170 Sum_probs=263.0
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|.++|.++|+|+|+++++|+++++.++.+++||.+++||++|+++.++++..+|+++|+++||++ ++|++||.||++|
T Consensus 1 m~v~I~~ig~y~P~~~v~~~~l~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t 78 (396)
T 1xpm_A 1 MAIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVAT 78 (396)
T ss_dssp -CEEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHTTTCCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEEC
T ss_pred CceEEEEEEEeCCCeEecHHHHHHHhCCCHHHHhhhcCceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEe
Confidence 56899999999999999999999999999999999999999999988999999999999999998 7899999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. +.+.+|+..||++.++++++++++|+|++.||..|.++|++|+.++|||+++|..+..+++ ...++|||
T Consensus 79 ~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~s~~~~~~---~~~~~~Gd 155 (396)
T 1xpm_A 79 ESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLNS---GGEPTQGA 155 (396)
T ss_dssp SSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCCTTC---SSGGGCEE
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehhhccccCC---CCCccccc
Confidence 9987654 5799999999997568999999999999999999999999999999999999984333343 34679999
Q ss_pred eeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 225 AAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 225 GAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
||+|+||++.+ +++.+... +|...+.+. . . +.+.... ++.|+|+.+++++.+.++
T Consensus 156 GA~A~vl~~~~----~i~~~~~~-~g~~~~d~~---------~------~---~~p~~~~--~~~~~G~~~~~~~~~~~~ 210 (396)
T 1xpm_A 156 GAVAMVIAHNP----SILALNED-AVAYTEDVY---------D------F---WRPTGHK--YPLVDGALSKDAYIRSFQ 210 (396)
T ss_dssp EEEEEEEEESC----SSEEECSC-CEEEECCCC---------S------E---ECBTTCS--SCEECHHHHHHHHHHHHH
T ss_pred ceEEEEeccCC----ceEEEEec-cccccceEE---------E------e---eccCCCC--CeEEEcHHHHHHHHHHHH
Confidence 99999999742 45443322 111110000 0 0 1111111 367899999999999999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHc-----CCCchhhhhcc-------cccCccccChHHHHHHHHHH
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRL-----DVPMERVISNL-------ANYGNTSAASIPLALDEAVR 372 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~l-----gl~~e~~~~~l-------~~~Gn~~sasi~~~L~~~l~ 372 (401)
++++++|+++|++++|||+|++||+|.++++.+.+++ +++++++..++ ++||||++||+|++|+++++
T Consensus 211 ~~~~~~L~~agl~~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~ 290 (396)
T 1xpm_A 211 QSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE 290 (396)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 89999887665 89999999999999999999
Q ss_pred cCCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 373 SGKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
++++++||+|++++||+|+++.+++++|.
T Consensus 291 ~~~l~~Gd~ill~s~GsG~~~~~~~~~v~ 319 (396)
T 1xpm_A 291 NRDLQAGETIGLFSYGSGSVGEFYSATLV 319 (396)
T ss_dssp HSCCCTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCCCCCEEEEEEECcchhheEEEEEEc
Confidence 99999999999999999999999999983
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-49 Score=398.21 Aligned_cols=308 Identities=17% Similarity=0.185 Sum_probs=261.2
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++++|+++++.++.+++|+...+|+++|+++.++++..+|+++|+++||+++|++|++||+||++|
T Consensus 2 ~~v~I~~ig~y~P~~~v~~~~l~~~~g~~~~~~~~g~G~~~~~~~~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t 81 (450)
T 2f82_A 2 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGS 81 (450)
T ss_dssp CSCEEEEEEEECCSEEEEHHHHHHHTTCCTTTTTTTSCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred CceEEEEEEEECCCeeccHHHHHHHhCCCHHHhhhhhCceeeeeCCCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEe
Confidence 57899999999999999999999999999999988999999999888999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCC--CCCCeeEeeCccChHHHHHHHHHHHHHHcCCC--CeEEEEEeccCCCCCCCCCCCccc
Q 015758 146 STPEDLF-GGATQIPKALGC--KNNPLAYDITAACSGFLLGLVSAACHIRGGGF--RNVLVIGGDALSRFTDWTDRGSCI 220 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl--~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~--~~vLvv~~d~~s~~~~~~dr~~~~ 220 (401)
+++++.. +.+.+|+..||+ ++++++++++++|+|++.||.+|.++|++|.+ ++||||++|.++ |.++....
T Consensus 82 ~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----~~~~~~~~ 157 (450)
T 2f82_A 82 ETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----YAEGPARP 157 (450)
T ss_dssp CCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----CSSSTTGG
T ss_pred cCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----ccCCCCCc
Confidence 9987754 579999999998 45789999999999999999999999999987 999999999875 44555678
Q ss_pred cccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHH
Q 015758 221 LFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300 (401)
Q Consensus 221 lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~ 300 (401)
+|||||+|+||++++ .+ .+...++|.+..++. +.+ .|.... .+..|+|+.+++++.
T Consensus 158 ~fGDGA~A~ll~~~~----~~-~~~~~~~g~~~~~~~---------d~~--------~p~~~~--~~~~~~G~~~~~~~~ 213 (450)
T 2f82_A 158 TGGAAAIAMLIGPDA----PI-VFESKLRGSHMAHVY---------DFY--------KPNLAS--EYPVVDGKLSQTCYL 213 (450)
T ss_dssp GCEEEEEEEEEESSC----SE-EEEEEEEEEEECCCC---------SEE--------CCCTTC--SCCEECHHHHHHHHH
T ss_pred ccccceEEEEeccCC----ce-EEEeccceeehhhcc---------cee--------eeCCCC--CceeecCccHHHHHH
Confidence 999999999998753 12 333333332111110 001 111111 135789999999999
Q ss_pred HHHHHHHHHHHH------HcCCCcCCcCEEEecccCHHHHHHHHHHcC------------------CCc-----------
Q 015758 301 RVVPQTIESALE------KAGLTMSSIDWLLLHQANQRIIDAVANRLD------------------VPM----------- 345 (401)
Q Consensus 301 ~~~~~~i~~aL~------~agl~~~dId~~i~Hq~~~~i~~~i~~~lg------------------l~~----------- 345 (401)
+.++++++++|+ ++|++++|||+|++||+|.++++.+.++|+ +++
T Consensus 214 ~~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 293 (450)
T 2f82_A 214 MALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQ 293 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHT
T ss_pred HHHHHHHHHHHHHhhhccccCCChhhcCEEEecCChHHHHHHHHHHhccccccccccccccccccccccccccccccccc
Confidence 999999999996 889999999999999999999999999998 454
Q ss_pred ----hhhhh----------------cccccCccccChHHHHHHHHHHcCC-CCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 346 ----ERVIS----------------NLANYGNTSAASIPLALDEAVRSGK-VKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 346 ----e~~~~----------------~l~~~Gn~~sasi~~~L~~~l~~g~-~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
||++. ++.+||||++||+|++|++++++++ +++||+|++++||+|++|++++++|.
T Consensus 294 ~~~~ek~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~~~~~~l~~~ 370 (450)
T 2f82_A 294 SRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLC 370 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHHHHHHHHHHHHGGGCTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred chhHHHHHhhhhHHHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHhCccCCCCCEEEEEeecCCcccEEEEEEEe
Confidence 44443 3689999999999999999999885 88999999999999999999999993
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-48 Score=391.39 Aligned_cols=307 Identities=16% Similarity=0.179 Sum_probs=254.0
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|+++|.++|+|+|+++|+++++++..+.+++|+...+||++|+++.++++..+|+++|+++||+++|++|++||+||++|
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T 102 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGT 102 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHHTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred CceEEEEEEEECCCeEecHHHHHHHhCCChhHhecccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHH---HHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCC--CCeEEEEEeccCCCCCCCCCCCcc
Q 015758 146 STPEDLF-GGATQIP---KALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGG--FRNVLVIGGDALSRFTDWTDRGSC 219 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~---~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~--~~~vLvv~~d~~s~~~~~~dr~~~ 219 (401)
+++++.. +.+.+|+ ..+|+ +++++++++++|+|++.||.+|..+|++|. .++||||++|.. +|.++.+.
T Consensus 103 ~t~~~~~ps~a~~v~~~L~~lG~-~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----~~~~~~~~ 177 (478)
T 2p8u_A 103 ETIIDKSKSVKTNLMQLFEESGN-TDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----VYATGNAR 177 (478)
T ss_dssp SCCSCSSSCHHHHHGGGTTTTTC-CCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----CCCSSTTG
T ss_pred cCCcccCccHHHHHHHHHhhcCC-CCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----cccCCCCC
Confidence 9998754 6789999 55556 478999999999999999999999999998 999999999953 56666677
Q ss_pred ccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHH--
Q 015758 220 ILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFR-- 297 (401)
Q Consensus 220 ~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~-- 297 (401)
.+|||||+|+||++++ .++ ++...++.. . .+....+ .|.... .+..|+|+..++
T Consensus 178 ~~fGdGA~A~Ll~~~~---~~~--l~~~~~gs~--------~-~~~~d~~--------~p~~~~--~~~~~dG~~s~~~y 233 (478)
T 2p8u_A 178 PTGGVGAVALLIGPNA---PLI--FERGLRGTH--------M-QHAYDFY--------KPDMLS--EYPIVDGKLSIQCY 233 (478)
T ss_dssp GGCEEEEEEEEEESSC---SEE--ECTTCCEEE--------E-CCCCSEE--------CCCTTC--SSCEECHHHHHHHH
T ss_pred CcccceeEEEEEecCC---Cce--Eeeccceec--------c-cchhhee--------eecCCC--cceEEcCcchHHHH
Confidence 8999999999998753 121 111001110 0 0000111 111111 135788988877
Q ss_pred -HHHHHHHHHHHHHHH--------HcCCCcCCcCEEEecccCHHHHHHHHHHcC------------------------CC
Q 015758 298 -FAVRVVPQTIESALE--------KAGLTMSSIDWLLLHQANQRIIDAVANRLD------------------------VP 344 (401)
Q Consensus 298 -~~~~~~~~~i~~aL~--------~agl~~~dId~~i~Hq~~~~i~~~i~~~lg------------------------l~ 344 (401)
..++.+.+.+++.|+ ++|++++|||+|++||+|.++++.+.++|+ ++
T Consensus 234 ~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~~did~~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (478)
T 2p8u_A 234 LSALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVK 313 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCCGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhhhccccccccCCChHHcCEEEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCC
Confidence 445566677777777 679999999999999999999999999998 66
Q ss_pred c---------h-------------h---hhhcccccCccccChHHHHHHHHHHcCC--CCCCCEEEEEeeehhhhheeeE
Q 015758 345 M---------E-------------R---VISNLANYGNTSAASIPLALDEAVRSGK--VKPGHTIAAAGFGAGLTWGSAI 397 (401)
Q Consensus 345 ~---------e-------------~---~~~~l~~~Gn~~sasi~~~L~~~l~~g~--~~~Gd~ill~~~G~G~s~~a~l 397 (401)
. | | ...++.+||||++||+|++|++++++++ +++||+|++++||+|++|++++
T Consensus 314 ~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi~l~L~~ll~~~~~~~~~Gdrill~s~GsG~~~~~~~ 393 (478)
T 2p8u_A 314 LEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYS 393 (478)
T ss_dssp GGGCTTCHHHHHHHHHHTHHHHHHHTTGGGHHHHHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEE
T ss_pred hhhcccchhHHHHHHHHhHHHHHHhHHHHHHHHHhcCchHHHHHHHHHHHHHHhCCccCCCCCEEEEEEEcchhhhEEEE
Confidence 6 5 4 3346789999999999999999999987 8899999999999999999999
Q ss_pred EEeC
Q 015758 398 LRWG 401 (401)
Q Consensus 398 lr~~ 401 (401)
++|.
T Consensus 394 l~~~ 397 (478)
T 2p8u_A 394 LKVT 397 (478)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9983
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=397.25 Aligned_cols=316 Identities=16% Similarity=0.172 Sum_probs=249.3
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
++|+|.++|.|+|+++|+|+||++..+.+++||..++||++|+++.++|+..+|+++|+++||+++|++|++||+||++|
T Consensus 4 ~~VgI~~~g~y~P~~~v~~~~l~~~~~~~~~~i~~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT 83 (460)
T 2wya_A 4 KDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGT 83 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHTTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEEC
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHHhhCcEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCC--CCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEE--EeccCCCCCCCCCCCccc
Q 015758 146 STPEDLF-GGATQIPKALGCK--NNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVI--GGDALSRFTDWTDRGSCI 220 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~--~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv--~~d~~s~~~~~~dr~~~~ 220 (401)
+|+++.. +.++.|++.||+. .++.+||++++|+||+.||.+|.++|++|..++++++ .+| ..+|.++.++.
T Consensus 84 ~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~----~~~~~d~~~~~ 159 (460)
T 2wya_A 84 ETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGD----IAVYPSGNARP 159 (460)
T ss_dssp SCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEE----EECCCSSTTGG
T ss_pred CCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEecc----ccccccccccc
Confidence 9998776 5799999999742 4678999999999999999999999999986654443 333 33566777788
Q ss_pred cccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCC--CCcccEEEchHHHHHH
Q 015758 221 LFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQH--YSYSSIYMNGKEVFRF 298 (401)
Q Consensus 221 lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~--~~~~~~~m~g~~v~~~ 298 (401)
+|||||+|++++.++. +. +.....+....+. ...+..++.. ..|... .+..++.|+++++|++
T Consensus 160 ~~GdGA~A~l~~~~~~----~~-~~~~~~~~~~~~~---------~df~~p~~~s-~~~~~dg~~s~~~~~~~g~~v~~~ 224 (460)
T 2wya_A 160 TGGAGAVAMLIGPKAP----LA-LERGLRGTHMENV---------YDFYKPNLAS-EYPIVDGKLSIQCYLRALDRCYTS 224 (460)
T ss_dssp GCEEEEEEEEEESSCS----EE-ECTTCCEEEECCC---------CSEECCCTTC-SCCEECHHHHHHHHHHHHHHHHHH
T ss_pred cCcchHHhhhcccCCc----ce-eecccccccccch---------hhhhccCCCC-CCcccCCccchHHHHHhhHHHHHH
Confidence 9999999999987542 11 1000000000000 0001110000 011111 1112445778999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCC-----------------------------------
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDV----------------------------------- 343 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl----------------------------------- 343 (401)
+.+.+++.++++|+++|++.+|+|++++||++.++++...++|++
T Consensus 225 ~~~~~~~~~~~~l~~~~~~~~d~d~~v~Hqp~~r~~~k~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (460)
T 2wya_A 225 YRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDL 304 (460)
T ss_dssp HHHHHHHHHHHTTCCCCCCGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHhhhhhcccchHHHHHHHHHhcchhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHH
Confidence 999999999999999999999999999999999998877766643
Q ss_pred --------------CchhhhhcccccCccccChHHHHHHHHHHcC--CCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 344 --------------PMERVISNLANYGNTSAASIPLALDEAVRSG--KVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 344 --------------~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g--~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+.++...++.+||||++||+|++|+++++++ ++++||+|+++|||+|++...+-++.
T Consensus 305 ~k~~~~~~~~~~~~~~e~~~~~~~~~GNt~sASiplaL~~ll~~~~~~~~~GdrIll~~fGSGl~s~~fs~~v 377 (460)
T 2wya_A 305 DKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRV 377 (460)
T ss_dssp HHHHHHHHHHHHHHHTGGGGHHHHHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHHhhcchhhhhhHHHhhCCcchhhHHHHHHHHHHhccccCCCCCEEEEEEecCCccceEEEEEE
Confidence 2234445677999999999999999999754 46699999999999999988877664
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-47 Score=416.85 Aligned_cols=320 Identities=20% Similarity=0.242 Sum_probs=252.4
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhh---hCCchhh---------hhhhcCcceeEecCCCC------------------
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKI---VDTSDEW---------ISVRTGIRNRRVLSGKE------------------ 114 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~---~~~~~~~---------i~~~~Gi~~R~~~~~~e------------------ 114 (401)
.+.++|.|+|+|+|+.+++|+|+++. .+..+.| +.+++||++|+++.+++
T Consensus 601 ~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (979)
T 3tsy_A 601 KGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNI 680 (979)
T ss_dssp CSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSCCHHH
T ss_pred cCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCCCHHH
Confidence 35799999999999999999999998 5666655 88999999999987655
Q ss_pred -------CHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCC-CeeEeeCccChHHHHHHHH
Q 015758 115 -------SLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNN-PLAYDITAACSGFLLGLVS 186 (401)
Q Consensus 115 -------~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~-~~~~~i~~~C~~~~~aL~~ 186 (401)
+..+|+.+|+++||+++|+++++||+||++|+++...+..+.+|+.+||++.. +.+++++++|+|++.||.+
T Consensus 681 r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~ 760 (979)
T 3tsy_A 681 RQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRT 760 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHH
Confidence 36789999999999999999999999999997766556789999999999532 3589999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeccCCCCCCCCCCC------ccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeec
Q 015758 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRG------SCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACI 260 (401)
Q Consensus 187 A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~------~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~ 260 (401)
|.++|++|.+++||||++|.++...+..+.. .+++|||||+|+||++.+. .++....+...+.+...+
T Consensus 761 A~~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~--~~~~~~~~~~~~~~~~~~---- 834 (979)
T 3tsy_A 761 AKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPD--ISIERPLFQLVSAAQTFI---- 834 (979)
T ss_dssp HHHHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCC--SSSCCCCEEEEEEEEEEC----
T ss_pred HHHHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCC--ccccCcceEEEeeeeEEe----
Confidence 9999999999999999999977543322221 2469999999999997542 111111111111000000
Q ss_pred cCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHH
Q 015758 261 KGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANR 340 (401)
Q Consensus 261 ~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~ 340 (401)
.... +.. ..+.... ....+.++++++++.+.++++++++|+++|++++|||+|++||+|.++++.++++
T Consensus 835 ~~~~--------~~~-~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~~~ 903 (979)
T 3tsy_A 835 PNSA--------GAI-AGNLREV--GLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEAK 903 (979)
T ss_dssp TTCT--------TSE-EEEEETT--EEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHH
T ss_pred cCch--------hhe-EEEEecC--ceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHHHH
Confidence 0000 000 0000001 1234567889999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhhc---ccccCccccChHHHHHHHHHHc----CCCCCC---CEEEEEeeehhhhheeeEEEeC
Q 015758 341 LDVPMERVISN---LANYGNTSAASIPLALDEAVRS----GKVKPG---HTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 341 lgl~~e~~~~~---l~~~Gn~~sasi~~~L~~~l~~----g~~~~G---d~ill~~~G~G~s~~a~llr~~ 401 (401)
||++++|+..+ +++||||++||+|++|++++++ ++++.| |++++++||+|++|+++++||.
T Consensus 904 lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~ 974 (979)
T 3tsy_A 904 LNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSI 974 (979)
T ss_dssp HTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECC
T ss_pred cCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhc
Confidence 99999998765 9999999999999999998873 233333 4459999999999999999995
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=246.59 Aligned_cols=278 Identities=16% Similarity=0.149 Sum_probs=200.9
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEE
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMC 144 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 144 (401)
..+++|.+.++.++ +.|...-++..-+++.+...+.++.+ ++...+|+.+|+++||+++|++|+|||+||++
T Consensus 12 ~~~~~i~~~~~~~g-----~~E~~gpl~~~fd~~~~d~~fG~~t~---e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~g 83 (347)
T 3lma_A 12 ENPLFVNSSGTAVG-----PKEKEGPLGHLFDKSYDEMHCNQKNW---EMAERKLMEDAVQSALSKQNLKKEDIDIFLAG 83 (347)
T ss_dssp CSCCEEEEEEEEEC-----HHHHHSTTGGGSSEECSSTTTTSSSH---HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEE
T ss_pred CCCCEEEEEeeeeC-----chhhcCCchhhchhhhcccccCCcCc---cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 45689999999886 55665545444455555555555544 46789999999999999999999999999999
Q ss_pred ecCCCCCCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC---CCC------C
Q 015758 145 TSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT---DWT------D 215 (401)
Q Consensus 145 t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~---~~~------d 215 (401)
|.++ +.. .++.++++||+ ++|||+++|+||+.||.+|..+|++|.+++|||+++|.+|... ++. .
T Consensus 84 t~t~-q~~-~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~e~g~q~ 157 (347)
T 3lma_A 84 DLLN-QNV-TANYVARHLKI----PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPTEYGGQK 157 (347)
T ss_dssp ESSS-SST-THHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC----------
T ss_pred eCCC-chh-HHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcchhcccC
Confidence 9988 333 78899999975 5999999999999999999999999999999999999998532 121 1
Q ss_pred CCccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHH
Q 015758 216 RGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEV 295 (401)
Q Consensus 216 r~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v 295 (401)
+.+..+++|||+|+||++.+. .+++... +.|. .+++..... ++| |..+
T Consensus 158 p~ta~~t~dGAGA~VL~~~g~-~p~I~~~---t~Gk-----------------------vvd~g~~d~----~nm-g~am 205 (347)
T 3lma_A 158 PGTATSTVTGSGAVVLSQQPG-GIKITSA---TVGR-----------------------VIDLGITDS----QDM-GSAM 205 (347)
T ss_dssp ------CCCEEEEEEEESSCC-SEEEEEE---ECCC-----------------------CBCCSCCCT----TCH-HHHH
T ss_pred CchhcEEccceeEEEEEecCC-CCceeee---eeee-----------------------eeccCCCCC----CCc-cccc
Confidence 234568899999999996431 2233222 2221 111111110 112 2111
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEE---ecccCHHHHHHHHHHcCCCchhhhh--cccccCcc--------ccCh
Q 015758 296 FRFAVRVVPQTIESALEKAGLTMSSIDWLL---LHQANQRIIDAVANRLDVPMERVIS--NLANYGNT--------SAAS 362 (401)
Q Consensus 296 ~~~~~~~~~~~i~~aL~~agl~~~dId~~i---~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~--------~sas 362 (401)
.....+.|++.|+++|++++|+|+++ +||.|.+|++.+.+++|++.++++. .+..|+|. ||++
T Consensus 206 ----aPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~c 281 (347)
T 3lma_A 206 ----APAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCAC 281 (347)
T ss_dssp ----HHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCC
T ss_pred ----hHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCcccc
Confidence 23344778999999999999999999 8899999999999999999999874 56667665 4477
Q ss_pred HHHHHHHHHHcCCCCC--CCEEEEEeeehhhhh
Q 015758 363 IPLALDEAVRSGKVKP--GHTIAAAGFGAGLTW 393 (401)
Q Consensus 363 i~~~L~~~l~~g~~~~--Gd~ill~~~G~G~s~ 393 (401)
.++.|...+.+ +++. -++||++++|+.+|-
T Consensus 282 sa~v~~~~~~~-~~~~g~~~ril~~~tGalls~ 313 (347)
T 3lma_A 282 SAVVTFAHIFK-EIEAGRLNRVLVVATGALLSP 313 (347)
T ss_dssp HHHHHHHTHHH-HHHTTSCSEEEEEEEEECCCH
T ss_pred HHHHHHHHHHH-HHhcCcccEEEEEecccccCc
Confidence 77777665543 2333 378999999998763
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-25 Score=222.90 Aligned_cols=290 Identities=18% Similarity=0.252 Sum_probs=206.2
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhh---------------hhhhcCcceeEecCCCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEW---------------ISVRTGIRNRRVLSGKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~---------------i~~~~Gi~~R~~~~~~e~~~~la~~Aa 124 (401)
.|.|+|+|+.+|... +.+++++.+ +.+ +.| ..+.+||..|.... -+...+|+.+|+
T Consensus 4 ~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~fd~~~~~i~~~~~~~-~d~~~~l~l~aa 81 (424)
T 1tqy_A 4 RVVITGVGVRAPGGN-GTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDR-MDRASQFAVACA 81 (424)
T ss_dssp CEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHH-SCHHHHHHHHHH
T ss_pred CEEEEeeEEECCCCC-CHHHHHHHHHcCCCceeeCCCcccccCCcceeEEeccCHhhcCCCHHHHHh-cCHHHHHHHHHH
Confidence 589999999999885 788888754 211 001 11222333322221 236789999999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCCC---------------------------CCc-h-HH----HHHHHcCCCCC
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPED---------------------------LFG-G-AT----QIPKALGCKNN 167 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~~---------------------------~~~-~-a~----~i~~~lGl~~~ 167 (401)
++||+++|+++++|| .|+++++++++ ..+ . +. +|+..||++
T Consensus 82 ~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl~-- 159 (424)
T 1tqy_A 82 REAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAE-- 159 (424)
T ss_dssp HHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCC--
T ss_pred HHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCCC--
Confidence 999999999999999 68888876532 011 1 34 999999994
Q ss_pred CeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC----------CCC------------CCCCCccccccc
Q 015758 168 PLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SR----------FTD------------WTDRGSCILFGD 224 (401)
Q Consensus 168 ~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~----------~~~------------~~dr~~~~lfGD 224 (401)
.++++|+++|+|++.||..|.++|++|.++.+||+++|.+ +. .+. +..+..++++||
T Consensus 160 gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ge 239 (424)
T 1tqy_A 160 GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLAE 239 (424)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCEEC
T ss_pred CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceeeec
Confidence 6899999999999999999999999999999999999984 22 111 112235679999
Q ss_pred eeEEEEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHH
Q 015758 225 AAGAVLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFR 297 (401)
Q Consensus 225 GAaAvll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~ 297 (401)
||+|+||++.+. .+.. +.++...+|+. ++. .|. +++
T Consensus 240 GaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~--------------------~p~---------~~g----- 282 (424)
T 1tqy_A 240 GAAMFVLEDYDSALARGARIHAEISGYATRCNAY---HMT--------------------GLK---------ADG----- 282 (424)
T ss_dssp EEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSS---CSS--------------------CCC---------TTC-----
T ss_pred ceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCC---CCC--------------------CCC---------CCH-----
Confidence 999999997541 1222 33344434332 110 110 011
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhh--hcccccCccccChHHHHHHHH
Q 015758 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVI--SNLANYGNTSAASIPLALDEA 370 (401)
Q Consensus 298 ~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~ 370 (401)
....++++++|+++|++++|||++.+|+.+..+.| .+.+.++.+.+++. .....+||+.+|+-.+.|..+
T Consensus 283 ---~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~ 359 (424)
T 1tqy_A 283 ---REMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAAC 359 (424)
T ss_dssp ---HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHH
Confidence 24568899999999999999999999999987654 34556665544553 335688999999988877764
Q ss_pred ---HHcCCCC------------------------CCCEEEEEeeehhhhheeeEEEe
Q 015758 371 ---VRSGKVK------------------------PGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 371 ---l~~g~~~------------------------~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
++.+.+. +.++++..+||.|.++++++|++
T Consensus 360 ~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~ 416 (424)
T 1tqy_A 360 VLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 416 (424)
T ss_dssp HHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHcCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEcc
Confidence 4444321 46789999999999999999985
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=217.38 Aligned_cols=291 Identities=17% Similarity=0.228 Sum_probs=201.9
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCc-------hhhhhhhc---------C------cceeEecCCCCCHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTS-------DEWISVRT---------G------IRNRRVLSGKESLTGLAVEA 123 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~-------~~~i~~~~---------G------i~~R~~~~~~e~~~~la~~A 123 (401)
+.|.|+|+|+++|.. .+.+++++.+-.. ..|..... + |..|... .-+...+|+.+|
T Consensus 4 ~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~-~~d~~~~l~l~A 81 (413)
T 3o04_A 4 RRVVVTGIGAVTPIG-NDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEAR-KMDRFTHYAIAS 81 (413)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHT-TSCHHHHHHHHH
T ss_pred CCEEEEEeEEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHh-hCCHHHHHHHHH
Confidence 358999999999997 5888888754111 01100000 1 2222111 124678999999
Q ss_pred HHHHHHhCCCCcCCCC----EEEEEecCC-----------------CCCCc----------hHHHHHHHcCCCCCCeeEe
Q 015758 124 ASRALQMAEVNPEDVD----LVLMCTSTP-----------------EDLFG----------GATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 124 a~~aL~~agi~~~~Id----~li~~t~~~-----------------~~~~~----------~a~~i~~~lGl~~~~~~~~ 172 (401)
+++||+++|+++++|| .|+++++++ +...+ .+.+|+..||++ .++++
T Consensus 82 a~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~--gp~~~ 159 (413)
T 3o04_A 82 AEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAK--GINST 159 (413)
T ss_dssp HHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCC--SCEEC
T ss_pred HHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCC--Cccee
Confidence 9999999999999999 999998752 11111 278999999994 68999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC---------------CCCC-------CCCCCCccccccceeEEEE
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL---------------SRFT-------DWTDRGSCILFGDAAGAVL 230 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~---------------s~~~-------~~~dr~~~~lfGDGAaAvl 230 (401)
|+++|+|++.||..|.++|++|.++.|||+++|.+ +... .|.++..++++||||+|+|
T Consensus 160 v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~g~~~gdGAaavv 239 (413)
T 3o04_A 160 TVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFIIGEGAGIVI 239 (413)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTCCSBCBBCEEEEEE
T ss_pred ecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCCCCceEeccEEEEE
Confidence 99999999999999999999999999999999982 2111 1223345679999999999
Q ss_pred EeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 231 VQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 231 l~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
|++.+. .+.. +.++...+|+. ++. .|. .++ ...
T Consensus 240 L~~~~~A~~~g~~i~a~i~g~~~~~dg~---~~~--------------------~~~---------~~~--------~~~ 279 (413)
T 3o04_A 240 LEEYEHAKARGAKIYAEIVGYGATGDAY---HIT--------------------APA---------PNG--------EGA 279 (413)
T ss_dssp EEEHHHHHHHTCCCCEEEEEEEEEECCS---CSS--------------------SCC---------GGG--------HHH
T ss_pred EeeHHHHHhCCCeEEEEEEEEEEcCCCC---CCC--------------------CCC---------CCH--------HHH
Confidence 997431 1111 33344433331 110 110 011 245
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH-----HHHcCCCchhhh--hcccccCccccChHHHHHHHHHH---c
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV-----ANRLDVPMERVI--SNLANYGNTSAASIPLALDEAVR---S 373 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i-----~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l~---~ 373 (401)
.++++++|+++|++++|||++.+|..+....|.+ .+.++...+++. .....+||+.+|+-.+.+..++. +
T Consensus 280 ~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~ 359 (413)
T 3o04_A 280 ARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRD 359 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999998776643 344554444443 34568899999887766655544 2
Q ss_pred CCC------------------------CCCCEEEEEeeehhhhheeeEEEe
Q 015758 374 GKV------------------------KPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 374 g~~------------------------~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+.+ .+..+++..+||.|.+.++++|+.
T Consensus 360 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~ 410 (413)
T 3o04_A 360 NIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKR 410 (413)
T ss_dssp TEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEe
Confidence 221 123677889999999999999974
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-24 Score=214.40 Aligned_cols=290 Identities=15% Similarity=0.206 Sum_probs=204.5
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhh---------------hhhcCcceeEecCCCCCHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWI---------------SVRTGIRNRRVLSGKESLTGLAVEA 123 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i---------------~~~~Gi~~R~~~~~~e~~~~la~~A 123 (401)
+.|.|+|+|+..|.. .+.+++++.+ +.+ +.|- ....+|..|... .-+...+|+++|
T Consensus 28 ~~vaI~G~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~-~~d~~~~l~l~a 105 (437)
T 2gqd_A 28 KRVVITGMGALSPIG-NDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEAR-RMDRFTQYAIVA 105 (437)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTT-TSCHHHHHHHHH
T ss_pred CCEEEEEeeEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHH-hcCHHHHHHHHH
Confidence 359999999999998 4778887754 111 0110 001122222111 123578999999
Q ss_pred HHHHHHhCCCCcCCCC----EEEEEecCCCC--------------------------CC-chHHHHHHHcCCCCCCeeEe
Q 015758 124 ASRALQMAEVNPEDVD----LVLMCTSTPED--------------------------LF-GGATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 124 a~~aL~~agi~~~~Id----~li~~t~~~~~--------------------------~~-~~a~~i~~~lGl~~~~~~~~ 172 (401)
+++||+++|+++++|| .|++++++++. .. ..+.+|+..||++ .++++
T Consensus 106 a~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~--gp~~~ 183 (437)
T 2gqd_A 106 AREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAK--GPNGA 183 (437)
T ss_dssp HHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC--SSEEC
T ss_pred HHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCC--CceEE
Confidence 9999999999999999 99999886641 01 2478999999994 58999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CCC--------------------CC-CCCCCccccccceeEEEE
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SRF--------------------TD-WTDRGSCILFGDAAGAVL 230 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~~--------------------~~-~~dr~~~~lfGDGAaAvl 230 (401)
|+++|+|++.||..|.++|++|.++.+||+++|.+ +.. .+ +..+..++++||||+|+|
T Consensus 184 v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~v~geGaaavv 263 (437)
T 2gqd_A 184 TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILV 263 (437)
T ss_dssp BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTCCSBCBBCEEEEEE
T ss_pred ecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCCCCceeeceEEEEE
Confidence 99999999999999999999999999999999973 211 12 222345689999999999
Q ss_pred EeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 231 VQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 231 l~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
|++.+. .+.. +.++...+|+. ++. .|. .++ ...
T Consensus 264 L~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~--------------------~p~---------~~~--------~~~ 303 (437)
T 2gqd_A 264 IESLESAQARGANIYAEIVGYGTTGDAY---HIT--------------------APA---------PEG--------EGG 303 (437)
T ss_dssp EEEHHHHHHHTCCCCEEEEEEEEEECCS---CSS--------------------SCC---------GGG--------HHH
T ss_pred ECcHHHHHhCCCceEEEEEEEEecCCCC---CCC--------------------CCC---------CCH--------HHH
Confidence 987531 1111 33444444432 111 110 011 245
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCchhhh--hcccccCccccChHHHHHHHHH---Hc
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPMERVI--SNLANYGNTSAASIPLALDEAV---RS 373 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l---~~ 373 (401)
.++++++|+++|++++|||++.+|+.+..+.| .+.+.++.+.+++. .+...+||+.+|+-.+.+..++ +.
T Consensus 304 ~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~ 383 (437)
T 2gqd_A 304 SRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKD 383 (437)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhc
Confidence 68899999999999999999999999988755 34556665545554 3456799999998877766554 33
Q ss_pred CCCC------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 374 GKVK------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 374 g~~~------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+.+. +.++++..+||.|.+.++++|+
T Consensus 384 ~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 433 (437)
T 2gqd_A 384 SKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFK 433 (437)
T ss_dssp TEECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEE
Confidence 3211 2467889999999999999986
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=219.21 Aligned_cols=292 Identities=20% Similarity=0.251 Sum_probs=206.5
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhc-----C----------cceeEecCCCCCHHHHHHH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRT-----G----------IRNRRVLSGKESLTGLAVE 122 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~-----G----------i~~R~~~~~~e~~~~la~~ 122 (401)
.+.|.|+|+|+..|... +.+++++.+ +.+ +.|..... | |..|.... -+....|+.+
T Consensus 17 ~~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~-~d~~~~l~l~ 94 (427)
T 3ho9_A 17 KRRVVVTGLGMLSPVGN-TVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRK-MDAFIQYGIV 94 (427)
T ss_dssp CCCEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTT-SCHHHHHHHH
T ss_pred CCCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhh-CCHHHHHHHH
Confidence 46799999999999974 788888754 111 11100000 0 11111111 2357899999
Q ss_pred HHHHHHHhCCCCcCCCC----EEEEEecCCC---------------------C-----CC-chHHHHHHHcCCCCCCeeE
Q 015758 123 AASRALQMAEVNPEDVD----LVLMCTSTPE---------------------D-----LF-GGATQIPKALGCKNNPLAY 171 (401)
Q Consensus 123 Aa~~aL~~agi~~~~Id----~li~~t~~~~---------------------~-----~~-~~a~~i~~~lGl~~~~~~~ 171 (401)
|+++||+++|+++++|| .++++++++. + .. ..+.+|+..||++ .+++
T Consensus 95 aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~--Gp~~ 172 (427)
T 3ho9_A 95 AGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLR--GPSI 172 (427)
T ss_dssp HHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC--SCEE
T ss_pred HHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCC--CCee
Confidence 99999999999999999 5888877531 0 01 1378999999994 6899
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------------------CCCCCCCCccccccceeEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------------------FTDWTDRGSCILFGDAAGA 228 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------------------~~~~~dr~~~~lfGDGAaA 228 (401)
+|+++|+|++.||..|.++|++|.++.+||+++|.++. ...|.++..++++||||+|
T Consensus 173 ~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~v~geGAaa 252 (427)
T 3ho9_A 173 SIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGM 252 (427)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEEEE
T ss_pred cccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCceeeeeEEE
Confidence 99999999999999999999999999999999999852 0112233456799999999
Q ss_pred EEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 229 VLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 229 vll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
+||++.+. .+.. +.++...+|+. ++. .|.. ++ .
T Consensus 253 vvL~~~~~A~~~g~~i~a~i~g~~~~~dg~---~~~--------------------~p~~---------~~--------~ 292 (427)
T 3ho9_A 253 LVLEEYEHAKKRGAKIYAELVGFGMSSDAY---HMT--------------------SPPE---------NG--------A 292 (427)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCS---BTT--------------------BCCT---------TC--------H
T ss_pred EEEccHHHHHHCCCcEEEEEEEEeecCCCC---CcC--------------------CCCC---------CH--------H
Confidence 99997431 1111 33344444431 110 1100 01 2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEec-----ccCHHHHHHHHHHcCCCchhhh--hcccccCccccChHHHHHHHHHH--
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLH-----QANQRIIDAVANRLDVPMERVI--SNLANYGNTSAASIPLALDEAVR-- 372 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~H-----q~~~~i~~~i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l~-- 372 (401)
...++++++|+++|++++|||++.+| +.+......+.+.++.+.+++. .....+||+.+|+-.+.+..++.
T Consensus 293 ~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l 372 (427)
T 3ho9_A 293 GAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILAL 372 (427)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHH
Confidence 34588999999999999999999999 6666677788888988777765 34568999999986666555433
Q ss_pred -cCCC-------------------------CCCCEEEEEeeehhhhheeeEEEe
Q 015758 373 -SGKV-------------------------KPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 373 -~g~~-------------------------~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
.+.+ .+.++++..+||.|.+.++++|+.
T Consensus 373 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 373 RDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp HHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred hcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 3311 145788999999999999999974
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-24 Score=212.34 Aligned_cols=254 Identities=20% Similarity=0.156 Sum_probs=191.6
Q ss_pred hcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChH
Q 015758 101 RTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSG 179 (401)
Q Consensus 101 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~ 179 (401)
+|++.+|+....+++..+|+.+|+++||+++|+++++||.|++++.+++... ..+.+++..+|++.+.++++|+.+|+|
T Consensus 14 rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~~~Css 93 (395)
T 4e1l_A 14 RTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGS 93 (395)
T ss_dssp ECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEECCGGGH
T ss_pred cCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEccccchH
Confidence 5777777666678899999999999999999999999999999998876543 468999999999767899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCCCC-------------------------------------------------
Q 015758 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSRF------------------------------------------------- 210 (401)
Q Consensus 180 ~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~------------------------------------------------- 210 (401)
++.+|..|.++|++|.+++|||+++|.+|..
T Consensus 94 ~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~ 173 (395)
T 4e1l_A 94 GLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEF 173 (395)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHhCC
Confidence 9999999999999999999999999988740
Q ss_pred -------------------------------------------CCCC-------------------C------CCccccc
Q 015758 211 -------------------------------------------TDWT-------------------D------RGSCILF 222 (401)
Q Consensus 211 -------------------------------------------~~~~-------------------d------r~~~~lf 222 (401)
+++. + ...+..+
T Consensus 174 tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~~~ 253 (395)
T 4e1l_A 174 TREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGI 253 (395)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCCCc
Confidence 0000 0 0123457
Q ss_pred cceeEEEEEeeccCC---CCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHH
Q 015758 223 GDAAGAVLVQACDSE---DDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEV 295 (401)
Q Consensus 223 GDGAaAvll~~~~~~---~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v 295 (401)
||||+|+||++.+.. +.. +.++...++ . . . .+.
T Consensus 254 ~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----------~-p---~---------~~~---------------- 293 (395)
T 4e1l_A 254 NDGAAMLILMSQQKADELGIRPLAKIKSYASAGV-----------E-P---E---------VMG---------------- 293 (395)
T ss_dssp EEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----------C-G---G---------GTT----------------
T ss_pred cceEEEEEEecHHHHHHCCCCeEEEEEEEEEccC-----------C-C---C---------cch----------------
Confidence 899999999975411 111 111111100 0 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHc
Q 015758 296 FRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 296 ~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
....++++++|+++|++++|||++.+|+.+......+.+.||+++++++. ....+||+.+++-...+.+++.+
T Consensus 294 -----~~~~~ai~~al~~agl~~~dId~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~ 368 (395)
T 4e1l_A 294 -----TGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYE 368 (395)
T ss_dssp -----CTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHcCCCHHHcCEEEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHH
Confidence 11247889999999999999999999999999999999999999988864 34579999888877766666554
Q ss_pred CCCCCCCEEEEEeeehhhhheeeEEE
Q 015758 374 GKVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 374 g~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
-+-+.+.+.+...++.|....+++++
T Consensus 369 L~~~~~~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 369 MQKRKVETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp HHHHTCSEEEEEEESSTTEEEEEEEE
T ss_pred HHhcCCCEEEEEEccCCCceEEEEEe
Confidence 22234566666666666666777765
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-24 Score=211.64 Aligned_cols=289 Identities=16% Similarity=0.196 Sum_probs=202.1
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhhC--Cc-----hhhh---------------hhhcCcceeEecCCCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIVD--TS-----DEWI---------------SVRTGIRNRRVLSGKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~~--~~-----~~~i---------------~~~~Gi~~R~~~~~~e~~~~la~~Aa 124 (401)
.|.|+|+|+..|... +.+++++.+- .+ ++|. ....+|..|.... -+...+|+.+|+
T Consensus 8 ~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~-~d~~~~l~l~aa 85 (416)
T 1e5m_A 8 RVVVTGLGAITPIGN-TLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKR-MDRFCHFAVCAS 85 (416)
T ss_dssp CEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHT-SCHHHHHHHHHH
T ss_pred CEEEEeeeEECCCCC-CHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHh-cCHHHHHHHHHH
Confidence 589999999999884 7788877541 11 0110 0001121111111 135679999999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCCC-----------------C---------C-chHHHHHHHcCCCCCCeeEee
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPED-----------------L---------F-GGATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~~-----------------~---------~-~~a~~i~~~lGl~~~~~~~~i 173 (401)
++||+++|+++++|| .|++++++++. . . ..+.+|+..||++ .++++|
T Consensus 86 ~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~--gp~~~v 163 (416)
T 1e5m_A 86 QQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK--GPNNCT 163 (416)
T ss_dssp HHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC--SCEECC
T ss_pred HHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC--CceeCc
Confidence 999999999999999 79988876541 0 1 2478999999994 689999
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCCC----------C-----------C-CCCCCccccccceeEEEE
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDA-LSRF----------T-----------D-WTDRGSCILFGDAAGAVL 230 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~-~s~~----------~-----------~-~~dr~~~~lfGDGAaAvl 230 (401)
+++|+|++.||..|.++|++|.++.+||+++|. .+.. + + +..+..++++||||+|+|
T Consensus 164 ~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaaavv 243 (416)
T 1e5m_A 164 VTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGILI 243 (416)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEEEE
T ss_pred cchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEEEEE
Confidence 999999999999999999999999999999997 3421 1 1 122235679999999999
Q ss_pred EeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 231 VQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 231 l~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
|++.+. .+.. +.++...+|+. ++. .|.. ++ ...
T Consensus 244 L~~~~~A~~~g~~i~a~I~g~~~~~d~~---~~~--------------------~p~~---------~~--------~~~ 283 (416)
T 1e5m_A 244 LEELESALARGAKIYGEMVGYAMTCDAY---HIT--------------------APVP---------DG--------RGA 283 (416)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCS---CSS--------------------SCCT---------TC--------HHH
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCC---CCC--------------------CCCC---------CH--------HHH
Confidence 997531 1112 34444444442 111 1100 01 245
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhhh--hcccccCccccChHHHHHHHHH---Hc
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERVI--SNLANYGNTSAASIPLALDEAV---RS 373 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l---~~ 373 (401)
.++++++|+++|++++|||++.+|+.+..+.|. +.+.++...+++. .+...+||+.+|+-.+.+..++ +.
T Consensus 284 ~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~ 363 (416)
T 1e5m_A 284 TRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAE 363 (416)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhc
Confidence 688999999999999999999999999887654 4455665555554 3456799999988777665544 33
Q ss_pred CCCC------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 374 GKVK------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 374 g~~~------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+.+. +-++.+..+||.|.+..+++|+
T Consensus 364 ~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~ 413 (416)
T 1e5m_A 364 DKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFK 413 (416)
T ss_dssp TEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred CCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEE
Confidence 3210 2367788999999999999886
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=212.65 Aligned_cols=255 Identities=20% Similarity=0.162 Sum_probs=192.8
Q ss_pred hcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChH
Q 015758 101 RTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSG 179 (401)
Q Consensus 101 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~ 179 (401)
+|+|.+|+....+++..+|+.+|+++||+++|+++++||.+++++.+++... ..+.+++..+|++.+.++++++.+|+|
T Consensus 14 rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~~aCss 93 (394)
T 3ss6_A 14 RSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSS 93 (394)
T ss_dssp ECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEECGGGH
T ss_pred cCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEecCcchH
Confidence 5777777766678899999999999999999999999999999998876533 468999999999757999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCC------C----------------------------------------
Q 015758 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSRFTD------W---------------------------------------- 213 (401)
Q Consensus 180 ~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~------~---------------------------------------- 213 (401)
++.+|.+|.++|++|.++++||+++|.++.... |
T Consensus 94 ~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~t 173 (394)
T 3ss6_A 94 GMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEIT 173 (394)
T ss_dssp HHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhCCC
Confidence 999999999999999999999999998874110 0
Q ss_pred ---------------------------------------------------------------CCC------Cccccccc
Q 015758 214 ---------------------------------------------------------------TDR------GSCILFGD 224 (401)
Q Consensus 214 ---------------------------------------------------------------~dr------~~~~lfGD 224 (401)
.++ ..+..+||
T Consensus 174 re~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~~d 253 (394)
T 3ss6_A 174 REEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLND 253 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCCEE
T ss_pred HHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCccc
Confidence 000 12345789
Q ss_pred eeEEEEEeeccCC---CCCe----eEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHH
Q 015758 225 AAGAVLVQACDSE---DDGL----ISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFR 297 (401)
Q Consensus 225 GAaAvll~~~~~~---~~gl----~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~ 297 (401)
||+|+||++.+.. +..+ .++...+. -|.. .+
T Consensus 254 GaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~----------------------------~p~~---------~~----- 291 (394)
T 3ss6_A 254 GSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV----------------------------DPKI---------MG----- 291 (394)
T ss_dssp EEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC----------------------------CGGG---------GG-----
T ss_pred ceeEEEeccHHHHHHCCCCceEEEEEEEEecC----------------------------CCcc---------ch-----
Confidence 9999999875410 1111 11111100 0000 00
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHcCC
Q 015758 298 FAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 298 ~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
....++++++|+++|++++|||++.+|+.+......+.+.||+++++++. ....+||+.+|+-...+.+++.+-+
T Consensus 292 ---~~~~~a~~~al~~agl~~~dId~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~ 368 (394)
T 3ss6_A 292 ---IGPAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELK 368 (394)
T ss_dssp ---GTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCCCHHHcCEEEeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHH
Confidence 12347889999999999999999999999999999999999999988863 3458999999987666666655422
Q ss_pred CCCCCEEEEEeeehhhhheeeEEEe
Q 015758 376 VKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 376 ~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
-+.+.+.+...++.|....+++++.
T Consensus 369 ~~~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 369 RRGLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp HHTCCEEEEEEEETTTEEEEEEEEE
T ss_pred hcCCCEEEEEEccCcCceeEEEEEc
Confidence 2345677766667667777777764
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=214.14 Aligned_cols=289 Identities=19% Similarity=0.228 Sum_probs=203.9
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhh--------------hhcCcceeEecCCCCCHHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWIS--------------VRTGIRNRRVLSGKESLTGLAVEAAS 125 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~--------------~~~Gi~~R~~~~~~e~~~~la~~Aa~ 125 (401)
.|.|+|+|...|... +.+++++.+ +.+ +.|-. ....+..|... .-+...+|+.+|++
T Consensus 3 ~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~-~~d~~~~l~~~aa~ 80 (408)
T 1j3n_A 3 RVVVTGLGALTPIGV-GQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLDRKELR-RLDRFVQYALIAAQ 80 (408)
T ss_dssp CEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCGGGTSCHHHHT-TSCHHHHHHHHHHH
T ss_pred CEEEEEeEEECCCCC-CHHHHHHHHHcCCCeeeeccccCcccCccceEEEEccChhhcCCHHHHH-hcCHHHHHHHHHHH
Confidence 589999999999875 788887754 211 11100 00011111111 12457899999999
Q ss_pred HHHHhCCCCcCCCCE----EEEEecCCCC--------------------------CC-chHHHHHHHcCCCCCCeeEeeC
Q 015758 126 RALQMAEVNPEDVDL----VLMCTSTPED--------------------------LF-GGATQIPKALGCKNNPLAYDIT 174 (401)
Q Consensus 126 ~aL~~agi~~~~Id~----li~~t~~~~~--------------------------~~-~~a~~i~~~lGl~~~~~~~~i~ 174 (401)
+||+++|+++++||. ++++++++++ .. ..+.+|+..||++ .++++|+
T Consensus 81 ~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--gp~~~v~ 158 (408)
T 1j3n_A 81 LALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFT--GPSSTVV 158 (408)
T ss_dssp HHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC--SCBCCBC
T ss_pred HHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCC--CceeCcc
Confidence 999999999999994 7777776542 11 2478999999994 5899999
Q ss_pred ccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC----------CCC-----------C-CCCCccccccceeEEEEE
Q 015758 175 AACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SR----------FTD-----------W-TDRGSCILFGDAAGAVLV 231 (401)
Q Consensus 175 ~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~----------~~~-----------~-~dr~~~~lfGDGAaAvll 231 (401)
++|+|++.||..|.++|++|.++.+||+++|.. +. .+. + ..+..++++||||+|+||
T Consensus 159 ~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaaavvL 238 (408)
T 1j3n_A 159 TACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLVL 238 (408)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEEEE
T ss_pred CchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEEEEEE
Confidence 999999999999999999999999999999973 32 111 1 122356799999999999
Q ss_pred eeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 232 QACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 232 ~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
++.+. .+.. +.++...+|+. ++. .|. +++ ....
T Consensus 239 ~~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~--------------------~p~---------~~~--------~~~~ 278 (408)
T 1j3n_A 239 EAYEHAKKRGARIYAELVGFGRSADAH---HIT--------------------EPH---------PEG--------KGAA 278 (408)
T ss_dssp EEHHHHHHTTCCCCEEEEEEEEEECCS---CSS--------------------CCC---------TTC--------HHHH
T ss_pred eeHHHHHhCCCcEEEEEEEEEEcCCCC---CCC--------------------CCC---------CCH--------HHHH
Confidence 97541 1111 23333333331 110 110 011 3455
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHH-----HHHHHHHcCCCchhhh--hcccccCccccChHHHHHHHHHH---cC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRI-----IDAVANRLDVPMERVI--SNLANYGNTSAASIPLALDEAVR---SG 374 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i-----~~~i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l~---~g 374 (401)
++++++|+++|++++|||++.+|+.+..+ .+.+.+.||.+.+++. .....+||+.+|+-.+.|..++. ++
T Consensus 279 ~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~ 358 (408)
T 1j3n_A 279 LAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHG 358 (408)
T ss_dssp HHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcC
Confidence 88999999999999999999999999876 5567778887666664 23468999999998887765543 22
Q ss_pred CC-----------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 375 KV-----------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~-----------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+ .+.++++..+||.|.+-++++|+
T Consensus 359 ~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~ 406 (408)
T 1j3n_A 359 VIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFK 406 (408)
T ss_dssp EECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEe
Confidence 21 13467899999999999999987
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-24 Score=214.05 Aligned_cols=283 Identities=17% Similarity=0.123 Sum_probs=188.3
Q ss_pred cCCCccChHHHHhhhCC---chhhhhh--hcCcceeE-ecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCC
Q 015758 77 VPTLQISNDDLAKIVDT---SDEWISV--RTGIRNRR-VLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPED 150 (401)
Q Consensus 77 lP~~~v~~~~l~~~~~~---~~~~i~~--~~Gi~~R~-~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~ 150 (401)
-|+++++|+++.+.++. .+.||.. +|++.+|+ ....+++..+|+.+|+++||+++|+++++||.|++++++++.
T Consensus 10 ~P~~~~~n~~~~~~~~~~~~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~ 89 (418)
T 2iik_A 10 GVDLGTENLYFQSMAPQASAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG 89 (418)
T ss_dssp -----------------CCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBG
T ss_pred CCCccccHHHHHHHhhhccCCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCcc
Confidence 49999999999998774 5667765 77887752 455688999999999999999999999999999999988765
Q ss_pred CC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC------------------
Q 015758 151 LF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT------------------ 211 (401)
Q Consensus 151 ~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~------------------ 211 (401)
.. ..+..++..+|++.+.++++|+++|+|++.||..|.++|++|.++.+||+++|.++...
T Consensus 90 ~~~~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~ 169 (418)
T 2iik_A 90 AGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKAR 169 (418)
T ss_dssp GGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHH
T ss_pred ccccHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccc
Confidence 43 34678889999965689999999999999999999999999999999999999876410
Q ss_pred ------------------------------------------CC------------------------------------
Q 015758 212 ------------------------------------------DW------------------------------------ 213 (401)
Q Consensus 212 ------------------------------------------~~------------------------------------ 213 (401)
.+
T Consensus 170 ~~~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e 249 (418)
T 2iik_A 170 DCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTME 249 (418)
T ss_dssp GGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHH
T ss_pred cccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHH
Confidence 00
Q ss_pred --------CCC------CccccccceeEEEEEeeccCC-CCC--eeEEEEeecCCCCCceeeeccCCCcccccCCCCccc
Q 015758 214 --------TDR------GSCILFGDAAGAVLVQACDSE-DDG--LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVL 276 (401)
Q Consensus 214 --------~dr------~~~~lfGDGAaAvll~~~~~~-~~g--l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~ 276 (401)
.|+ ..+..++|||+|+||++.+.. +.| ++.. +...+. . +.
T Consensus 250 ~l~~~~~vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~-i~g~~~-----~---------------~~-- 306 (418)
T 2iik_A 250 GLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGV-LRSYAV-----V---------------GV-- 306 (418)
T ss_dssp HHHHCCCSSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEE-EEEEEE-----E---------------EC--
T ss_pred HHhhCCCcccCCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEE-EEEEEe-----c---------------cC--
Confidence 011 134578999999999975421 111 1111 110000 0 00
Q ss_pred ccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcc--cc
Q 015758 277 AFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL--AN 354 (401)
Q Consensus 277 ~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l--~~ 354 (401)
-| .. .+ .....+++++|+++|++++|||++-.|...........+.||++++++..+- ..
T Consensus 307 -~p----~~-----~~--------~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~~~~~~~lg~~~~~vN~~GG~~a 368 (418)
T 2iik_A 307 -PP----DI-----MG--------IGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVA 368 (418)
T ss_dssp -CG----GG-----GG--------GHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHHHHTCCGGGBCTTCCHHH
T ss_pred -Cc----hh-----cc--------hhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHHHHHHHHcCCCccccCCCCCeee
Confidence 00 00 00 1123689999999999999999999998877555556778999887776443 47
Q ss_pred cCccccChHHHHHHHHHHcCCCCCCC-EEEEEeeehhhhheeeEEEe
Q 015758 355 YGNTSAASIPLALDEAVRSGKVKPGH-TIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 355 ~Gn~~sasi~~~L~~~l~~g~~~~Gd-~ill~~~G~G~s~~a~llr~ 400 (401)
+||+..++-...+.+++.+-+-+.+. +.+...++.|....+++++.
T Consensus 369 ~GHp~GAsG~~~~~~~~~~L~~~~~~~~gl~~~c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 369 LGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVFEY 415 (418)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEETTTEEEEEEEEE
T ss_pred ecCChhhhHHHHHHHHHHHHHhcCCCeeeEEEEeeccchhheEEEec
Confidence 89998777555555544432212344 66666666677777888874
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=208.97 Aligned_cols=255 Identities=22% Similarity=0.176 Sum_probs=194.3
Q ss_pred hhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccCh
Q 015758 100 VRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACS 178 (401)
Q Consensus 100 ~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~ 178 (401)
.+|+|.+|+...++++..+|+.+|++++|+++|+++++||.|++++++++... ..+.+++..||++.+.++++|+.+|+
T Consensus 15 ~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~aCs 94 (396)
T 4dd5_A 15 ARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCG 94 (396)
T ss_dssp EECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGG
T ss_pred ccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEeccccH
Confidence 35777777777778999999999999999999999999999999999887654 46899999999976799999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC------CC---------------------------------------
Q 015758 179 GFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT------DW--------------------------------------- 213 (401)
Q Consensus 179 ~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~------~~--------------------------------------- 213 (401)
|++.+|..|.++|++|.+++|||+++|.+|... ++
T Consensus 95 s~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g 174 (396)
T 4dd5_A 95 SGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWN 174 (396)
T ss_dssp HHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhC
Confidence 999999999999999999999999999887410 00
Q ss_pred -----------------------------------------------------------------CCC------Cccccc
Q 015758 214 -----------------------------------------------------------------TDR------GSCILF 222 (401)
Q Consensus 214 -----------------------------------------------------------------~dr------~~~~lf 222 (401)
.++ ..+..+
T Consensus 175 ~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~ 254 (396)
T 4dd5_A 175 ITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGI 254 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCc
Confidence 000 123456
Q ss_pred cceeEEEEEeeccCC---CCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHH
Q 015758 223 GDAAGAVLVQACDSE---DDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEV 295 (401)
Q Consensus 223 GDGAaAvll~~~~~~---~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v 295 (401)
||||+|+||++.+.. +.. +.++...++ .|.. .+
T Consensus 255 ~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~----------------------------~p~~---------~~--- 294 (396)
T 4dd5_A 255 NDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV----------------------------DPKI---------MG--- 294 (396)
T ss_dssp EEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC----------------------------CGGG---------GG---
T ss_pred CcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC----------------------------CCCc---------cc---
Confidence 999999999975411 111 111111100 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHc
Q 015758 296 FRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 296 ~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
....++++++|+++|++++|||++.+|.........+.+.||+++++++. ....+||+.+++-...+.+++.+
T Consensus 295 -----~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~ 369 (396)
T 4dd5_A 295 -----YGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYE 369 (396)
T ss_dssp -----GTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHcCCCHHHcCEEEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHH
Confidence 12347889999999999999999999999988888889999999887753 34579999888877766666554
Q ss_pred CCCCCCCEEEEEeeehhhhheeeEEE
Q 015758 374 GKVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 374 g~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
-+-+.+.+.+...++.|....+++|+
T Consensus 370 L~~~~~~~gl~~~c~ggG~g~a~~~e 395 (396)
T 4dd5_A 370 MKRRDAKTGLATLCIGGGMGTTLIVK 395 (396)
T ss_dssp HHHHTCSEEEEEEEETTTEEEEEEEE
T ss_pred HHhcCCCeEEEEEcccCCceeEEEEe
Confidence 22235667788878888888888876
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=209.68 Aligned_cols=288 Identities=16% Similarity=0.167 Sum_probs=198.8
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhc-----C----------cceeEecCCCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRT-----G----------IRNRRVLSGKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~-----G----------i~~R~~~~~~e~~~~la~~Aa 124 (401)
.|.|+|+|+.+|.. .+.+++++.+ +.+ ++|....+ | +..+... .-+...+|+++|+
T Consensus 24 ~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~-~~d~~~~l~l~aa 101 (430)
T 1ox0_A 24 RVVVTGYGVTSPIG-NTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTN-RFDNYSLYALYAA 101 (430)
T ss_dssp CEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGG-TCCHHHHHHHHHH
T ss_pred CEEEEEEEEECCCc-CCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHH-hcCHHHHHHHHHH
Confidence 59999999999997 5788887754 211 11110000 0 1111111 1235789999999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCCC---------------------C-----C-chHHHHHHHcCCCCCCeeEee
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPED---------------------L-----F-GGATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~~---------------------~-----~-~~a~~i~~~lGl~~~~~~~~i 173 (401)
++||+++|+++++|| .+++++++++. . . ..+.+|+..||++ .++++|
T Consensus 102 ~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~--Gp~~~v 179 (430)
T 1ox0_A 102 QEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN--GVCKSI 179 (430)
T ss_dssp HHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC--SCEECC
T ss_pred HHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC--CceEee
Confidence 999999999999999 58888876541 0 1 1478999999994 699999
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC-C----------CCC-----------CCCCCccccccceeEEEEE
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS-R----------FTD-----------WTDRGSCILFGDAAGAVLV 231 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s-~----------~~~-----------~~dr~~~~lfGDGAaAvll 231 (401)
+++|+|++.||..|.++|++|.++.+||+++|.+. . .+. +.++..++++||||+|+||
T Consensus 180 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~~~geGAaavvL 259 (430)
T 1ox0_A 180 NTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVMGEGSGMLVL 259 (430)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSBCBCCEEEEEEE
T ss_pred cCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCccccceEEEEEE
Confidence 99999999999999999999999999999999853 2 121 2223356799999999999
Q ss_pred eeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 232 QACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 232 ~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
++.+. .+.. +.++...+|+. ++. .|.. ++ ....
T Consensus 260 ~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~--------------------~p~~---------~~--------~~~~ 299 (430)
T 1ox0_A 260 ESLEHAEKRGATILAEVVGYGNTCDAY---HMT--------------------SPHP---------EG--------QGAI 299 (430)
T ss_dssp EEHHHHHHTTCCCCEEEEEEEEEECCS---CSS--------------------SCCT---------TC--------HHHH
T ss_pred CcHHHHHhCCCceEEEEEEEEEecCCC---CCC--------------------CCCC---------Ch--------HHHH
Confidence 97541 1111 23333444432 110 1100 01 3456
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH-----HHHcCCCchhhhhcccccCccccChHHHHHHHHH---HcCCC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAV-----ANRLDVPMERVISNLANYGNTSAASIPLALDEAV---RSGKV 376 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i-----~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l---~~g~~ 376 (401)
++++++|+++|++++|||++.+|+.+....|.+ .+.+|-+. .+..+...+||+.+|+-.+.+..++ +.+.+
T Consensus 300 ~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~-~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~i 378 (430)
T 1ox0_A 300 KAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKEV-PVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFV 378 (430)
T ss_dssp HHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCSSS-EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCCCc-eecccccccccchhhHHHHHHHHHHHHHhcCcc
Confidence 889999999999999999999999998877643 34455311 1123455789999988777666554 33321
Q ss_pred ------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 377 ------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 377 ------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
..-.+++..+||.|.+.++++|+
T Consensus 379 pp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 425 (430)
T 1ox0_A 379 PMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFK 425 (430)
T ss_dssp CCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred CCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEe
Confidence 12367889999999999999986
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-23 Score=206.10 Aligned_cols=289 Identities=19% Similarity=0.233 Sum_probs=204.2
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhh----------------------hcCcceeEecCCCCCHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISV----------------------RTGIRNRRVLSGKESLT 117 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~----------------------~~Gi~~R~~~~~~e~~~ 117 (401)
.+.|.|+|...|-.. +.+++++.+ +.+ ++|... ...|..|... .-+...
T Consensus 11 ~~viTG~G~vsp~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~-~~d~~~ 88 (428)
T 3kzu_A 11 RVVITGLGLVSPLAS-GVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQR-KVDPFI 88 (428)
T ss_dssp CEEEEEEEEECSSCB-SHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHT-TSCHHH
T ss_pred ceEEEeceEECCCcC-CHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHH-hCCHHH
Confidence 478999999999975 778887754 111 111000 0012222211 123678
Q ss_pred HHHHHHHHHHHHhCCCCcCC-CC----EEEEEecCC--------------------------CCCCc-hHHHHHHHcCCC
Q 015758 118 GLAVEAASRALQMAEVNPED-VD----LVLMCTSTP--------------------------EDLFG-GATQIPKALGCK 165 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~-Id----~li~~t~~~--------------------------~~~~~-~a~~i~~~lGl~ 165 (401)
+|+.+|+++||+++|+++++ || .++++++.+ ....+ .+.+|+..||++
T Consensus 89 ~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 168 (428)
T 3kzu_A 89 VYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLR 168 (428)
T ss_dssp HHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcCCC
Confidence 99999999999999999998 77 577776532 11122 478999999994
Q ss_pred CCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC---------------CCC---------CCCCCCCcccc
Q 015758 166 NNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL---------------SRF---------TDWTDRGSCIL 221 (401)
Q Consensus 166 ~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~---------------s~~---------~~~~dr~~~~l 221 (401)
.++++|+++|+|++.||..|.++|++|.++.+||+++|.+ +.. ..+.++..+++
T Consensus 169 --Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v 246 (428)
T 3kzu_A 169 --GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDGFV 246 (428)
T ss_dssp --SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCCSBC
T ss_pred --CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCCcee
Confidence 6899999999999999999999999999999999999982 211 11223345689
Q ss_pred ccceeEEEEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHH
Q 015758 222 FGDAAGAVLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKE 294 (401)
Q Consensus 222 fGDGAaAvll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~ 294 (401)
+||||+|+||++.+. .+.. +.++...+|+. ++. .|.. ++
T Consensus 247 ~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~---~~~--------------------~p~~---------~~-- 292 (428)
T 3kzu_A 247 MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAF---HIT--------------------APTE---------SG-- 292 (428)
T ss_dssp BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCS---CSS--------------------SCCT---------TC--
T ss_pred ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCC---CCC--------------------CCCC---------CH--
Confidence 999999999997431 1111 33333333331 110 1100 01
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEec----ccCHHHHHHHHHHcCCCchhhh--hcccccCccccChHHHHHH
Q 015758 295 VFRFAVRVVPQTIESALEKAGLTMSSIDWLLLH----QANQRIIDAVANRLDVPMERVI--SNLANYGNTSAASIPLALD 368 (401)
Q Consensus 295 v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~H----q~~~~i~~~i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~ 368 (401)
....++++++|+++|++++|||++.+| +.+...++.+.+.++.+.+++. .....+||+.+|+-.+.+.
T Consensus 293 ------~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i 366 (428)
T 3kzu_A 293 ------EGAQRCMVAALKRAGIVPDEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAV 366 (428)
T ss_dssp ------HHHHHHHHHHHHHHTCCGGGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHH
T ss_pred ------HHHHHHHHHHHHHcCCCHHHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHH
Confidence 234588999999999999999999999 8888888889999998877775 3456899998888777766
Q ss_pred HHHH---cCCC------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 369 EAVR---SGKV------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 369 ~~l~---~g~~------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
+++. .+.+ .+.++++..+||.|.+.++++|+
T Consensus 367 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~ 424 (428)
T 3kzu_A 367 FSTLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLR 424 (428)
T ss_dssp HHHHHHHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHhccCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEe
Confidence 6543 2311 23467889999999999999986
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-23 Score=209.46 Aligned_cols=291 Identities=16% Similarity=0.176 Sum_probs=201.9
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhh-----hcC----------------cceeEecCCCCCH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISV-----RTG----------------IRNRRVLSGKESL 116 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~-----~~G----------------i~~R~~~~~~e~~ 116 (401)
.+.|.|+|+|+..|.. .+.+++++.+ +.+ ++|-.. ..| +..|.. ..-+..
T Consensus 20 ~~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~-~~~d~~ 97 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLG-VGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDI-KSMSSP 97 (438)
T ss_dssp ECCEEEEEEEEEETTE-ESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHH-TTSCHH
T ss_pred CCCEEEEeeeEECCCC-CCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHH-HhcCHH
Confidence 3569999999999987 5888888754 111 111100 000 111111 112457
Q ss_pred HHHHHHHHHHHHHhCCCCc-CCCC----EEEEEecCCCC--------------------------CC-chHHHHHHHcCC
Q 015758 117 TGLAVEAASRALQMAEVNP-EDVD----LVLMCTSTPED--------------------------LF-GGATQIPKALGC 164 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~-~~Id----~li~~t~~~~~--------------------------~~-~~a~~i~~~lGl 164 (401)
.+|+.+|+++||+++|+++ ++|| .|++++++++. .. ..+.+|+..||+
T Consensus 98 ~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (438)
T 2iwz_A 98 TIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKL 177 (438)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhCC
Confidence 8999999999999999998 8887 58888876542 11 248899999999
Q ss_pred CCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CCC----------C----------C-CCCCCccccc
Q 015758 165 KNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SRF----------T----------D-WTDRGSCILF 222 (401)
Q Consensus 165 ~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~~----------~----------~-~~dr~~~~lf 222 (401)
+ .++++|+++|+|++.||..|.++|++|.++.+||+++|.+ +.. + + +..+..++++
T Consensus 178 ~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~~~ 255 (438)
T 2iwz_A 178 K--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDGFVM 255 (438)
T ss_dssp C--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTCTTCCSBCB
T ss_pred C--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCCCCCCCEEe
Confidence 4 5899999999999999999999999999999999999963 211 0 1 1222356799
Q ss_pred cceeEEEEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHH
Q 015758 223 GDAAGAVLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEV 295 (401)
Q Consensus 223 GDGAaAvll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v 295 (401)
||||+|+||++.+. .+.. +.++...+|+. ++. .|.. ++
T Consensus 256 geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~---~~t--------------------~p~~---------~~--- 300 (438)
T 2iwz_A 256 GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAG---HIT--------------------APDP---------EG--- 300 (438)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCS---CSS--------------------SCCT---------TC---
T ss_pred eceEEEEEeccHHHHHhCCCceEEEEecceecCCCC---CCC--------------------CCCC---------CH---
Confidence 99999999997531 1111 33444444432 111 1100 01
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhhh--hcccccCccccChHHHHHH
Q 015758 296 FRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERVI--SNLANYGNTSAASIPLALD 368 (401)
Q Consensus 296 ~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~ 368 (401)
....++++++|+++|++++|||++.+|+.+..+.|. +.+.++...+++. .+...+||+.+|+-.+.+.
T Consensus 301 -----~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li 375 (438)
T 2iwz_A 301 -----EGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAA 375 (438)
T ss_dssp -----HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHH
T ss_pred -----HHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHH
Confidence 345688999999999999999999999999887553 4455665545554 3456889999998887766
Q ss_pred HHH---HcCCCC------------------------C---CCEEEEEeeehhhhheeeEEE
Q 015758 369 EAV---RSGKVK------------------------P---GHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 369 ~~l---~~g~~~------------------------~---Gd~ill~~~G~G~s~~a~llr 399 (401)
.++ +.+.+. + -.+.+..+||.|.+.+.++|+
T Consensus 376 ~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 436 (438)
T 2iwz_A 376 FTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIA 436 (438)
T ss_dssp HHHHHHHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHhcCccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEe
Confidence 554 333211 1 356788899999999999986
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=202.48 Aligned_cols=287 Identities=18% Similarity=0.214 Sum_probs=198.3
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCcceeEe----------------cCCCCCHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGIRNRRV----------------LSGKESLTGLAVE 122 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi~~R~~----------------~~~~e~~~~la~~ 122 (401)
+.|.|+|+|...|... +.+++++.+ +.+ ++|-.. .++..+.. ...-+...+|+.+
T Consensus 6 ~~v~ItG~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~-~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 83 (412)
T 4ewg_A 6 KRVVITGMGGVTALGS-RWDEIEAALKAGRNAVRRMPDWDYF-ESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR 83 (412)
T ss_dssp CCEEEEEEEEEBTTBS-SHHHHHHHHHHTCCCCEECGGGGGS-SSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred CEEEEEeeEEECCCcC-CHHHHHHHHHcCCCceeeCCccccc-cCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence 4689999999999964 788888754 211 122110 01111111 0112357899999
Q ss_pred HHHHHHHhCCC-CcCCCC----EEEEEecCCC-----------------C---------CC-chHHHHHHHcCCCCCCee
Q 015758 123 AASRALQMAEV-NPEDVD----LVLMCTSTPE-----------------D---------LF-GGATQIPKALGCKNNPLA 170 (401)
Q Consensus 123 Aa~~aL~~agi-~~~~Id----~li~~t~~~~-----------------~---------~~-~~a~~i~~~lGl~~~~~~ 170 (401)
|+++||+++|+ ++++|| .++++++.+. . .. ..+.+|+..||++ .++
T Consensus 84 aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--gp~ 161 (412)
T 4ewg_A 84 ASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLK--GRI 161 (412)
T ss_dssp HHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCC--SCE
T ss_pred HHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCC--CCc
Confidence 99999999999 788888 8888877532 0 11 2478999999994 699
Q ss_pred EeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC----------C------------CCCCCccccccceeEE
Q 015758 171 YDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT----------D------------WTDRGSCILFGDAAGA 228 (401)
Q Consensus 171 ~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~----------~------------~~dr~~~~lfGDGAaA 228 (401)
++|+++|+|++.||..|.++|++|.++.+||+++|.++... . |.++..++++||||++
T Consensus 162 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGAaa 241 (412)
T 4ewg_A 162 VPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGAAT 241 (412)
T ss_dssp EECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEEEE
T ss_pred ccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeEEE
Confidence 99999999999999999999999999999999999876311 0 2223456789999999
Q ss_pred EEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 229 VLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 229 vll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
+||++.+. .+.. +.++...+|+. ++. -| + ..
T Consensus 242 vvL~~~~~A~~~g~~i~a~i~g~~~~~dg~---~~~--------------------~p-----------~--------~~ 279 (412)
T 4ewg_A 242 LVLEEYEHAKARGATIHAEIVGFGCNSDGA---HMT--------------------QP-----------T--------AS 279 (412)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECSS---CSS--------------------SC-----------C--------HH
T ss_pred EEEccHHHHhhCCCcEEEEEEEEEEcCCCC---CCC--------------------CC-----------C--------HH
Confidence 99998531 1111 33333333331 110 11 0 13
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchhhhhcccccCccccChHHHHHHHHH---Hc
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMERVISNLANYGNTSAASIPLALDEAV---RS 373 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l---~~ 373 (401)
...++++++|+++|++++|||++.+|..+..+.|.++ +.++-. -.+......+||+.+|+-.+.+..++ ++
T Consensus 280 ~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~-~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~ 358 (412)
T 4ewg_A 280 TMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGER-MPISSLKSYVGHTLGACGALEAWWTIEMMKR 358 (412)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHCTT-CEEECTHHHHCBCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcCCC-CeeeCccccccccHHHHHHHHHHHHHHHHhc
Confidence 4568999999999999999999999999988776543 445422 11223445789999888666554443 32
Q ss_pred CCC-------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 374 GKV-------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 374 g~~-------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
+.+ .+.++++..+||.|.+.++++|+
T Consensus 359 ~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~ 409 (412)
T 4ewg_A 359 NWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFR 409 (412)
T ss_dssp TEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEE
T ss_pred CCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEe
Confidence 211 13467899999999999999986
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-21 Score=196.95 Aligned_cols=289 Identities=17% Similarity=0.137 Sum_probs=197.3
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCcceeEe--cC-------------CCCCHHHHHHH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGIRNRRV--LS-------------GKESLTGLAVE 122 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi~~R~~--~~-------------~~e~~~~la~~ 122 (401)
.+.|.|+|+|+..|... +.+++++.+ +.+ ++|.....++..|.. .. .-+...+|+.+
T Consensus 27 ~~~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~d~~~~l~l~ 105 (434)
T 2gp6_A 27 FPYVVVTGIAMTTALAT-DAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTRIELRRMGYLQRMSTV 105 (434)
T ss_dssp SCCEEEEEEEEECSSCS-SHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSCCSTTSSCHHHHHTCCHHHHHHHH
T ss_pred CCCEEEEeeEEeCCCCC-CHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCCchhhhCCHHHHHhCCHHHHHHHH
Confidence 34699999999999985 888888754 111 122200112222211 00 01346899999
Q ss_pred HHHHHHHhCCCC---cCCCCEEEEEecCCCCC--------------------------C-chHHHHHHHcCCCCCCeeEe
Q 015758 123 AASRALQMAEVN---PEDVDLVLMCTSTPEDL--------------------------F-GGATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 123 Aa~~aL~~agi~---~~~Id~li~~t~~~~~~--------------------------~-~~a~~i~~~lGl~~~~~~~~ 172 (401)
|+++||+++|++ +++|+ |+++++++++. . ..+.+|+..||++ .++++
T Consensus 106 aa~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~--Gp~~~ 182 (434)
T 2gp6_A 106 LSRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK--AGVMT 182 (434)
T ss_dssp HHHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC--SCEEC
T ss_pred HHHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC--CCeEE
Confidence 999999999984 44554 66677655430 1 1378999999994 68999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC------------CCC-----C-------CCCCccccccceeEE
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR------------FTD-----W-------TDRGSCILFGDAAGA 228 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~------------~~~-----~-------~dr~~~~lfGDGAaA 228 (401)
|+++|+|++.||..|.++|++|.++.+||+++|.++. .+. + ..+..++++||||+|
T Consensus 183 v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gdGAaa 262 (434)
T 2gp6_A 183 PVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGGAL 262 (434)
T ss_dssp EECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBCCEEE
T ss_pred eCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceecceEE
Confidence 9999999999999999999999999999999998654 332 1 112346799999999
Q ss_pred EEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 229 VLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 229 vll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
+||++.+. .+.. +.++...+|+. ++. .|.. ++ .
T Consensus 263 vvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~---~~~--------------------~p~~---------~~--------~ 302 (434)
T 2gp6_A 263 LLIETEEHAKARGANILARIMGASITSDGF---HMV--------------------APDP---------NG--------E 302 (434)
T ss_dssp EEEEEHHHHHTTTCCCCEEEEEEEEEECCS---CSS--------------------SCCT---------TC--------H
T ss_pred EEeCcHHHHHHCCCceEEEEEEEEEecCCC---CCC--------------------CCCC---------Ch--------H
Confidence 99997541 1111 33344444432 110 1100 01 3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH-----HHHcCCCchhhh--hcccccCccccChHHHHHHHHH---
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV-----ANRLDVPMERVI--SNLANYGNTSAASIPLALDEAV--- 371 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i-----~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l--- 371 (401)
...++++++|+++|++++|||++.+|..+..+.|.+ .+.++-. ++. .....+||+.+|+-.+.+..++
T Consensus 303 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l 380 (434)
T 2gp6_A 303 RAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAVYAPKSALGHSVGAVGAVESILTVLAL 380 (434)
T ss_dssp HHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEECCTHHHHCBCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHHhccC--CCCcccchhhhcCchhhhHHHHHHHHHHHH
Confidence 456899999999999999999999998887775543 3344422 332 3456899999998777765553
Q ss_pred HcCCCC------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 372 RSGKVK------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 372 ~~g~~~------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+.+.+. .-.+.+..+||.|.+-.+++|+
T Consensus 381 ~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 432 (434)
T 2gp6_A 381 RDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFG 432 (434)
T ss_dssp HHSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEE
T ss_pred hcCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEE
Confidence 444332 2356788999999999999986
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-22 Score=198.52 Aligned_cols=254 Identities=19% Similarity=0.117 Sum_probs=182.2
Q ss_pred hcCcceeE-ecCCCCCHHHHHHHHHHHHHHhC-CCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCcc
Q 015758 101 RTGIRNRR-VLSGKESLTGLAVEAASRALQMA-EVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAA 176 (401)
Q Consensus 101 ~~Gi~~R~-~~~~~e~~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~ 176 (401)
+|+|.+++ ....+++..+|+.+|++++|+++ |++|++||.|++++.+++.. +..+.+++..+|++...++++|+.+
T Consensus 11 rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~a 90 (387)
T 3goa_A 11 RTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRL 90 (387)
T ss_dssp ECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEECG
T ss_pred cCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEecCc
Confidence 56666664 45557899999999999999999 99999999999999888764 3568999999999767999999999
Q ss_pred ChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCC--------------------------------------------
Q 015758 177 CSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTD-------------------------------------------- 212 (401)
Q Consensus 177 C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~-------------------------------------------- 212 (401)
|+|++.+|.+|.++|++|.++.+||+++|.+|....
T Consensus 91 Css~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~ 170 (387)
T 3goa_A 91 CGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAA 170 (387)
T ss_dssp GGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999999999999999999999999998764100
Q ss_pred --------------CC----------------------------------------CC-------CccccccceeEEEEE
Q 015758 213 --------------WT----------------------------------------DR-------GSCILFGDAAGAVLV 231 (401)
Q Consensus 213 --------------~~----------------------------------------dr-------~~~~lfGDGAaAvll 231 (401)
+. ++ ..+...+|||+|+||
T Consensus 171 ~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL 250 (387)
T 3goa_A 171 RSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLV 250 (387)
T ss_dssp HHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEE
T ss_pred HHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEE
Confidence 00 00 123457899999999
Q ss_pred eeccC-CCCC------eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 232 QACDS-EDDG------LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 232 ~~~~~-~~~g------l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
++.+. .+.| +.++...+++ |.. . + ....
T Consensus 251 ~s~~~A~~~g~~~~a~i~g~~~~~~~----------------------------~~~-~--------~--------~~~~ 285 (387)
T 3goa_A 251 MSESRARELGLKPRARIRSMAVVGCD----------------------------PSI-M--------G--------YGPV 285 (387)
T ss_dssp EEHHHHHHTTCCCCEEEEEEEEEECC----------------------------TTS-T--------T--------CTHH
T ss_pred ecHHHHHHcCCCccEEEEEEEEcCCC----------------------------CCc-c--------h--------HHHH
Confidence 87541 1111 1121111110 000 0 0 0124
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCC---Cchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDV---PMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPG 379 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl---~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~G 379 (401)
.+++++|+++|++++|||++.+|..+........+.||+ +.++++.+ ...+||+..|+-...+.+++.+-+-+.+
T Consensus 286 ~a~~~al~~agl~~~did~ve~h~~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~ 365 (387)
T 3goa_A 286 PASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDA 365 (387)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHcCEEEEeCcchHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCC
Confidence 788999999999999999999999999887788899999 65665432 3368999766665555554443211344
Q ss_pred CEEEEEeeehhhhheeeEEE
Q 015758 380 HTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 380 d~ill~~~G~G~s~~a~llr 399 (401)
.+.+...++.|....+++|+
T Consensus 366 ~~gl~~~c~ggG~g~a~~~e 385 (387)
T 3goa_A 366 QFGLATMCIGLGQGIATVFE 385 (387)
T ss_dssp SEEEEEEEETTTEEEEEEEE
T ss_pred CEEEEEeccCcCceEEEEEE
Confidence 55555455555555666665
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-22 Score=198.69 Aligned_cols=286 Identities=21% Similarity=0.204 Sum_probs=197.1
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhc-----C----------cceeEecCCCCCHHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRT-----G----------IRNRRVLSGKESLTGLAVEA 123 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~-----G----------i~~R~~~~~~e~~~~la~~A 123 (401)
+.|.|+|+|+..|... +.+++++.+ +.+ +.|..... | |..+... .-+...+|+.+|
T Consensus 9 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~-~~d~~~~l~l~a 86 (415)
T 1tqy_B 9 KSVLITGVGVVAPNGL-GLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLP-QTDPSTRLALTA 86 (415)
T ss_dssp -CEEEEEEEEEETTEE-SHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGG-GCCHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHH-hcCHHHHHHHHH
Confidence 4689999999999885 788888754 111 11111000 0 1111111 123578999999
Q ss_pred HHHHHHhCCCCcCCCC----EEEEEecCCCC--------------------------CC-chHHHHHHHcCCCCCCeeEe
Q 015758 124 ASRALQMAEVNPEDVD----LVLMCTSTPED--------------------------LF-GGATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 124 a~~aL~~agi~~~~Id----~li~~t~~~~~--------------------------~~-~~a~~i~~~lGl~~~~~~~~ 172 (401)
+++||+++|+++++|| .|+++++++++ .. ..+.+|+..||++ .++++
T Consensus 87 a~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--gp~~~ 164 (415)
T 1tqy_B 87 ADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMR--GPSSA 164 (415)
T ss_dssp HHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCC--SSCEE
T ss_pred HHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCC--CceEe
Confidence 9999999999999999 89988875532 11 2478999999994 68999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCC---------------------CCCCCCCCccccccceeEEEE
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDA-LSR---------------------FTDWTDRGSCILFGDAAGAVL 230 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~-~s~---------------------~~~~~dr~~~~lfGDGAaAvl 230 (401)
|+++|+|++.||..|.++|++| ++.+||+++|. ++. ...|..+..++++||||+|+|
T Consensus 165 v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~~G~~~geGaaavv 243 (415)
T 1tqy_B 165 LVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGYVPGEGGAILV 243 (415)
T ss_dssp EECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTCCCBCBBCEEEEEE
T ss_pred ecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCCCCcceeeeEEEEE
Confidence 9999999999999999999999 99999999998 221 111223345679999999999
Q ss_pred EeeccC---CCC-C----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHH
Q 015758 231 VQACDS---EDD-G----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302 (401)
Q Consensus 231 l~~~~~---~~~-g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~ 302 (401)
|++.+. .+. . +.++...+|+. ++. .|.. .
T Consensus 244 L~~~~~A~~~g~~~i~a~I~g~~~~~dg~---~~~--------------------~p~~--------------------~ 280 (415)
T 1tqy_B 244 LEDSAAAEARGRHDAYGELAGCASTFDPA---PGS--------------------GRPA--------------------G 280 (415)
T ss_dssp EEEHHHHHHHTCCCCSEEEEEEEEEECCC---TTC--------------------CCCC--------------------S
T ss_pred ECcHHHHHHCCCCceEEEEEEEEEccCCC---CCC--------------------CCCH--------------------H
Confidence 997541 111 1 33333433331 110 1100 1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH-----HHHcCCCchhhhhcccccCccccChHHHHHHHHH---HcC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV-----ANRLDVPMERVISNLANYGNTSAASIPLALDEAV---RSG 374 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i-----~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l---~~g 374 (401)
..++++++|+++|++++|||++.+|..+..+.|.+ .+.++-..-.+.....++||+.+|+-.+.+..++ +++
T Consensus 281 ~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~ 360 (415)
T 1tqy_B 281 LERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREG 360 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCCceEeccchhhccChHHHHHHHHHHHHHHHhcC
Confidence 34789999999999999999999999998766643 3445532211223455789999998777665554 333
Q ss_pred CC------------------C------CCCEEEEEeeehhhhheeeEEE
Q 015758 375 KV------------------K------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~------------------~------~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+ . ...+++..+||.|.+.++++|+
T Consensus 361 ~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~ 409 (415)
T 1tqy_B 361 VIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLR 409 (415)
T ss_dssp SBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEE
T ss_pred CcCCCCCCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEe
Confidence 21 0 3467899999999999999986
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-22 Score=201.93 Aligned_cols=289 Identities=20% Similarity=0.232 Sum_probs=197.7
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhC--Cc-----hhhhhhhc-----------------C------cceeEecCCCCC
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVD--TS-----DEWISVRT-----------------G------IRNRRVLSGKES 115 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~--~~-----~~~i~~~~-----------------G------i~~R~~~~~~e~ 115 (401)
+.|.|+|+|++.|.. .+.+++++.+- .+ +.|..... + |..|.. ..-+.
T Consensus 24 ~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~-~~~d~ 101 (451)
T 4ddo_A 24 LRVVVTGIGIVSPLG-CGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKEL-RKMDR 101 (451)
T ss_dssp CCEEEEEEEEEETTE-ESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHH-TTSCH
T ss_pred CCEEEEEeEEECCCC-CCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHH-hhCCH
Confidence 469999999999987 47888887541 11 11111000 1 112211 12246
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCC-C----EEEEEecCCC--------------------------CCCc-hHHHHHHHcC
Q 015758 116 LTGLAVEAASRALQMAEVNPEDV-D----LVLMCTSTPE--------------------------DLFG-GATQIPKALG 163 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~~~~I-d----~li~~t~~~~--------------------------~~~~-~a~~i~~~lG 163 (401)
..+|+.+|+++||+++|+++++| | .++++++.+. ...+ .+.+|+..||
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 78999999999999999999999 7 6787776431 0111 3789999999
Q ss_pred CCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC------------------------CCCCCCCCcc
Q 015758 164 CKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR------------------------FTDWTDRGSC 219 (401)
Q Consensus 164 l~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~------------------------~~~~~dr~~~ 219 (401)
++ .++++|+++|+|++.||..|.++|++|.++.|||+++|.++. ...+..+..+
T Consensus 182 l~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~g 259 (451)
T 4ddo_A 182 FR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDG 259 (451)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCS
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCCC
Confidence 94 699999999999999999999999999999999999998642 1112223356
Q ss_pred ccccceeEEEEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEch
Q 015758 220 ILFGDAAGAVLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNG 292 (401)
Q Consensus 220 ~lfGDGAaAvll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g 292 (401)
+++||||+|+||++.+. .+.. +.++...+|+. ++ ..+.. ++
T Consensus 260 ~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~---~~--------------------~~~~~---------~~ 307 (451)
T 4ddo_A 260 FVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAY---HM--------------------TAGPD---------DG 307 (451)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCS---CS--------------------SCCCT---------TC
T ss_pred cEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCC---cc--------------------CCCCC---------CH
Confidence 78999999999997531 1111 33333333321 11 01110 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhhh--hcccccCccccChHHH
Q 015758 293 KEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERVI--SNLANYGNTSAASIPL 365 (401)
Q Consensus 293 ~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~~--~~l~~~Gn~~sasi~~ 365 (401)
....++++++|+++|++++|||++.+|..+..+.|. +.+.++.. .++. .....+||+.+|+-.+
T Consensus 308 --------~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~-~~~~v~s~k~~~GH~~gAaG~~ 378 (451)
T 4ddo_A 308 --------SGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVG-AGPAISSTKSATGHLLGAAGAI 378 (451)
T ss_dssp --------HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCSS-SSCEEECTHHHHCBCGGGHHHH
T ss_pred --------HHHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCCC-CCCcccCchhhhccCHHHHHHH
Confidence 245588999999999999999999999988776654 34455542 2222 3445789999888776
Q ss_pred HHHHHH---HcCCC-------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 366 ALDEAV---RSGKV-------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 366 ~L~~~l---~~g~~-------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+..++ +++.+ .+..+++..+||.|.+.++++|+
T Consensus 379 ~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~ 440 (451)
T 4ddo_A 379 EAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFR 440 (451)
T ss_dssp HHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEe
Confidence 655543 33311 12456888999999999999987
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-21 Score=193.09 Aligned_cols=288 Identities=17% Similarity=0.132 Sum_probs=196.9
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCcceeEecC---------------CCCCHHHHHHH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGIRNRRVLS---------------GKESLTGLAVE 122 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi~~R~~~~---------------~~e~~~~la~~ 122 (401)
.+.|.|+|+|+..|.. .+.+++++.+ +.+ ++|.....++..+.... .-+...+|+.+
T Consensus 11 ~~~vaI~G~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~d~~~~l~l~ 89 (416)
T 2wge_A 11 FPSVVVTAVTATTSIS-PDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKDPVDSHMGRLDMRRMSYVQRMGKL 89 (416)
T ss_dssp SCCEEEEEEEEEESSC-SSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSSCGGGGCCHHHHHHSCHHHHHHHH
T ss_pred CCcEEEEeeEEECCCC-CCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCCchhhhCCHHHHHhcCHHHHHHHH
Confidence 3569999999999998 5888888765 111 12221011211111100 01346789999
Q ss_pred HHHHHHHhCCCCcCCCCE----EEEEecCCCCC--------------------------C-chHHHHHHHcCCCCCCeeE
Q 015758 123 AASRALQMAEVNPEDVDL----VLMCTSTPEDL--------------------------F-GGATQIPKALGCKNNPLAY 171 (401)
Q Consensus 123 Aa~~aL~~agi~~~~Id~----li~~t~~~~~~--------------------------~-~~a~~i~~~lGl~~~~~~~ 171 (401)
|+++||+++|+ +++|. |+++++++++. . ..+.+|++.||++ .+++
T Consensus 90 aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~--gp~~ 165 (416)
T 2wge_A 90 LGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGAR--AGVM 165 (416)
T ss_dssp HHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC--SCEE
T ss_pred HHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccC--CCcc
Confidence 99999999998 44552 77787765431 0 1378999999994 7999
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC-----------CC------------CCCCCccccccceeEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF-----------TD------------WTDRGSCILFGDAAGA 228 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~-----------~~------------~~dr~~~~lfGDGAaA 228 (401)
+++++|+|++.||..|.++|++|.++.+||+++|.++.. +. +..+..+++|||||+|
T Consensus 166 ~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geGaaa 245 (416)
T 2wge_A 166 TPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGAL 245 (416)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCEEEE
T ss_pred cccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCceEE
Confidence 999999999999999999999999999999999986532 21 1112356799999999
Q ss_pred EEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 229 VLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 229 vll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
+||++.+. .+.. +.++...+|+. ++. .|. +++ .
T Consensus 246 vvL~~~~~A~~~g~~~~a~i~g~~~~~dg~---~~~--------------------~p~---------~~~--------~ 285 (416)
T 2wge_A 246 MLIETEEHAKARGAKPLARLLGAGITSDAF---HMV--------------------APA---------ADG--------V 285 (416)
T ss_dssp EEEEEHHHHHHTTCCCSEEEEEEEEEECCS---CSS--------------------SCC---------TTC--------H
T ss_pred EEECcHHHHHHCCCceEEEEEEEEEecCCC---Ccc--------------------CCC---------CCh--------H
Confidence 99997541 1111 23333333432 110 110 001 2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHH----HcCCCchhhh--hcccccCccccChHHHHHHHHHH---
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVAN----RLDVPMERVI--SNLANYGNTSAASIPLALDEAVR--- 372 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~----~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l~--- 372 (401)
...++++++|+++|++++|||++.+|..+..+.|.++- .++.. ++. .....+||+.+|+-.+.+...+.
T Consensus 286 ~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~ 363 (416)
T 2wge_A 286 RAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVYAPKSALGHSIGAVGALESVLTVLTLR 363 (416)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TSEEECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHHHHHHHHhccC--CCCccCCcccccCcHHHHHHHHHHHHHHHHh
Confidence 45688999999999999999999999998887766543 34422 332 35568899999988776655543
Q ss_pred cCCC------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 373 SGKV------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 ~g~~------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+.+ ..-.+++..+||.|.+..+++|+
T Consensus 364 ~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 414 (416)
T 2wge_A 364 DGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFG 414 (416)
T ss_dssp HTEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEE
T ss_pred cCCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEE
Confidence 2321 12356888999999999999986
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.6e-22 Score=215.26 Aligned_cols=292 Identities=19% Similarity=0.228 Sum_probs=207.0
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh--CC-------chh-hh------------------------------hhhcCc
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV--DT-------SDE-WI------------------------------SVRTGI 104 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~--~~-------~~~-~i------------------------------~~~~Gi 104 (401)
.++|.|+|+|+.+|...-+.+++++.+ +. .+. |- ...+||
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 457999999999999877888888754 11 011 10 122233
Q ss_pred ceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCE----EEEEecCCCCCC-------------------chHHHHHHH
Q 015758 105 RNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDL----VLMCTSTPEDLF-------------------GGATQIPKA 161 (401)
Q Consensus 105 ~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~----li~~t~~~~~~~-------------------~~a~~i~~~ 161 (401)
..|..... ++..+|+.+|+++||+++|+++++||. |+++++++++.. ..+.+|+..
T Consensus 85 ~~~ea~~m-dp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~ 163 (915)
T 2qo3_A 85 SPREAAAM-DPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYT 163 (915)
T ss_dssp CHHHHHTS-CHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHhC-CHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHH
Confidence 33322222 367899999999999999999999984 888887765431 137899999
Q ss_pred cCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CC-------CCCCCCcccccc
Q 015758 162 LGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FT-------DWTDRGSCILFG 223 (401)
Q Consensus 162 lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~-------~~~dr~~~~lfG 223 (401)
||++ .++++|+++|+|++.||++|.++|++|+++.+|++++|.++. .+ .+.++..++++|
T Consensus 164 lgl~--Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~g 241 (915)
T 2qo3_A 164 MGLE--GPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFS 241 (915)
T ss_dssp HTBC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBB
T ss_pred hCCC--CCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeec
Confidence 9994 699999999999999999999999999999999999998752 11 123334568999
Q ss_pred ceeEEEEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHH
Q 015758 224 DAAGAVLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVF 296 (401)
Q Consensus 224 DGAaAvll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~ 296 (401)
|||+|+||++.+. +++. |.++.+.+||... +. ..| +
T Consensus 242 EGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~-------------------~~--~~p-----------~----- 284 (915)
T 2qo3_A 242 EGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASN-------------------GL--SAP-----------S----- 284 (915)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCS-------------------ST--TCC-----------C-----
T ss_pred CceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCcc-------------------CC--CCC-----------C-----
Confidence 9999999997531 1222 2334444443210 00 011 1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHH-----HHHHHcCCCch---hhh--hcccccCccccChHHHH
Q 015758 297 RFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIID-----AVANRLDVPME---RVI--SNLANYGNTSAASIPLA 366 (401)
Q Consensus 297 ~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~-----~i~~~lgl~~e---~~~--~~l~~~Gn~~sasi~~~ 366 (401)
.....++++++|+++|++++|||++.+|..+..+.| .+.+.++.... .+. ....++||+.+|+-...
T Consensus 285 ---~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~ 361 (915)
T 2qo3_A 285 ---GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTG 361 (915)
T ss_dssp ---HHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHH
T ss_pred ---HHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHH
Confidence 134568999999999999999999999998765544 45567776432 222 35679999999988877
Q ss_pred HHHHHH---cCCCC--------------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 367 LDEAVR---SGKVK--------------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 367 L~~~l~---~g~~~--------------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
|..++. .+.+. .-.+.++.+||.|.+-+.++|+
T Consensus 362 lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~ 429 (915)
T 2qo3_A 362 LLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVE 429 (915)
T ss_dssp HHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEE
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEe
Confidence 766543 33211 1246889999999999999986
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-22 Score=198.70 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=174.2
Q ss_pred CHHHHHHHHHHHHHHhCCC-CcCCCC----EEEEEecCCCC-----------------C---------C-chHHHHHHHc
Q 015758 115 SLTGLAVEAASRALQMAEV-NPEDVD----LVLMCTSTPED-----------------L---------F-GGATQIPKAL 162 (401)
Q Consensus 115 ~~~~la~~Aa~~aL~~agi-~~~~Id----~li~~t~~~~~-----------------~---------~-~~a~~i~~~l 162 (401)
...+|+.+|+++||+++|+ +++++| .|+++++.+.. . . ..+.+|+..|
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 5679999999999999999 988887 57777765420 0 1 1478999999
Q ss_pred CCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC-----------CC-------------CCCCCc
Q 015758 163 GCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF-----------TD-------------WTDRGS 218 (401)
Q Consensus 163 Gl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~-----------~~-------------~~dr~~ 218 (401)
|++ .++++|+++|+|++.||..|.++|++|.++.+||+++|.++.. +. +..+..
T Consensus 167 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 244 (431)
T 2ix4_A 167 GFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRD 244 (431)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCC
T ss_pred CCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCCCC
Confidence 994 6899999999999999999999999999999999999975421 11 112335
Q ss_pred cccccceeEEEEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEc
Q 015758 219 CILFGDAAGAVLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMN 291 (401)
Q Consensus 219 ~~lfGDGAaAvll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~ 291 (401)
++++||||+|+||++.+. .+.. +.++...+|+. ++. .|.. +
T Consensus 245 g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~---~~~--------------------~p~~---------~ 292 (431)
T 2ix4_A 245 GFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAH---HIT--------------------QPPE---------D 292 (431)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCS---CSS--------------------CCCT---------T
T ss_pred CceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCC---CCC--------------------CCCC---------C
Confidence 679999999999997542 1111 33444444442 111 1100 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCc--hhhh--hcccccCccccCh
Q 015758 292 GKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPM--ERVI--SNLANYGNTSAAS 362 (401)
Q Consensus 292 g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~--e~~~--~~l~~~Gn~~sas 362 (401)
+ ....++++++|+++|++++|||++.+|..+..+.|. +.+.++... +++. .....+||+.+|+
T Consensus 293 ~--------~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAs 364 (431)
T 2ix4_A 293 G--------KGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAA 364 (431)
T ss_dssp C--------HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGH
T ss_pred H--------HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHH
Confidence 1 345688999999999999999999999998876554 334444321 2332 2356899999998
Q ss_pred HHHHHHHHHH---cCCCC-------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 363 IPLALDEAVR---SGKVK-------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 363 i~~~L~~~l~---~g~~~-------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
-.+.+..++. .+.+. ...+.+..+||.|.+..+++|+
T Consensus 365 G~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~ 429 (431)
T 2ix4_A 365 GAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 429 (431)
T ss_dssp HHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEe
Confidence 7777666543 23210 2357888999999999999986
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=202.86 Aligned_cols=283 Identities=17% Similarity=0.210 Sum_probs=198.9
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCc----------------ceeEecCCCCCHHHHHHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGI----------------RNRRVLSGKESLTGLAVE 122 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi----------------~~R~~~~~~e~~~~la~~ 122 (401)
+.|.|+|+|+..|.. .+.+++++.+ +.+ ++|. ..++ ..|.. ..-++..+|+.+
T Consensus 23 ~~V~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~--~~~~~~~~~g~~~fd~~~~i~~~~~-~~~d~~~~l~~~ 98 (428)
T 3mqd_A 23 RRVVVTGMGIVSSIG-SNTEEVTASLREAKSGISRAEEYA--ELGFRCQVHGAPDIDIESLVDRRAM-RFHGRGTAWNHI 98 (428)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHH--HTTCSCCEEECCCCCHHHHSCTGGG-TTCCHHHHHHHH
T ss_pred CCEEEEeeEEECCCc-CCHHHHHHHHHcCCCcceeCCccc--ccCCCcccccccCCChhhcCCHHHH-hhCCHHHHHHHH
Confidence 469999999999997 5888888765 211 1221 1122 22211 123468899999
Q ss_pred HHHHHHHhCCCCcCCCC----EEEEEecCCCCC--------------------------C-chHHHHHHHcCCCCCCeeE
Q 015758 123 AASRALQMAEVNPEDVD----LVLMCTSTPEDL--------------------------F-GGATQIPKALGCKNNPLAY 171 (401)
Q Consensus 123 Aa~~aL~~agi~~~~Id----~li~~t~~~~~~--------------------------~-~~a~~i~~~lGl~~~~~~~ 171 (401)
|+++||+++|+++++|| .++++++.+++. . ..+.+|+..+|++ .+++
T Consensus 99 aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--gp~~ 176 (428)
T 3mqd_A 99 AMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIK--GINY 176 (428)
T ss_dssp HHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCC--SCEE
T ss_pred HHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCC--Ccee
Confidence 99999999999999998 688888765421 1 1478999999994 6999
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC----------------------C-CCCCCccccccceeEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT----------------------D-WTDRGSCILFGDAAGA 228 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~----------------------~-~~dr~~~~lfGDGAaA 228 (401)
+|+++|+|++.||..|.++|++|.++.+||+++|.++... + |.++...+++||||+|
T Consensus 177 tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gEGAaa 256 (428)
T 3mqd_A 177 SISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGV 256 (428)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBCEEEE
T ss_pred eecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccCCCCCcccccceEE
Confidence 9999999999999999999999999999999999865311 1 2233456799999999
Q ss_pred EEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 229 VLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 229 vll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
+||++.+. .+.. +.++...+|+. ++. -| ++ .
T Consensus 257 vvL~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~--------------------~P-----------~~--------~ 294 (428)
T 3mqd_A 257 LVLEDLETALARGAKIYGEIVGYGATSDGY---DMV--------------------AP-----------SG--------E 294 (428)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCS---CSS--------------------SC-----------CS--------H
T ss_pred EEEccHHHHHhCCCcEEEEEEEEEEcCCCC---CCC--------------------CC-----------CH--------H
Confidence 99997531 1111 33344444431 111 11 01 2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH-----HHHcCCCchhhh--hcccccCccccChHHHHHHHH---H
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV-----ANRLDVPMERVI--SNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i-----~~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
...++++++|+ |++ +|||++..|..+..+.|.+ .+.++...+++. .....+||+.+|+-.+.+..+ +
T Consensus 295 ~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l 371 (428)
T 3mqd_A 295 GAIRCMKMALS--TVT-SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMM 371 (428)
T ss_dssp HHHHHHHHHHT--TCC-SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh--CCc-cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHH
Confidence 34588899999 999 9999999999998877754 455664333332 344578999888876655443 3
Q ss_pred HcCCC-------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 372 RSGKV-------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 372 ~~g~~-------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
+++.+ .+-.+++..+||.|.+-++++|+
T Consensus 372 ~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~ 424 (428)
T 3mqd_A 372 QNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQ 424 (428)
T ss_dssp HHTEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEE
T ss_pred HhCCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEe
Confidence 33311 12357889999999999999986
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-21 Score=213.35 Aligned_cols=292 Identities=19% Similarity=0.236 Sum_probs=206.6
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhhC--C------chh--------------------hhhhhcCcceeEecCCCCCH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIVD--T------SDE--------------------WISVRTGIRNRRVLSGKESL 116 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~~--~------~~~--------------------~i~~~~Gi~~R~~~~~~e~~ 116 (401)
..+|.|+|+|+.+|.. .+.+++++.+. . +.. +....+||..|..... ++.
T Consensus 3 ~~~IaIvGmg~r~P~~-~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~m-Dp~ 80 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPES-ENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTM-DPQ 80 (965)
T ss_dssp CCCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTS-CHH
T ss_pred CCCEEEEeeeEECCCC-CCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhc-CHH
Confidence 3579999999999996 68899988651 1 001 1123345555544333 367
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCC----EEEEEecCCCC-------------------CC-chHHHHHHHcCCCCCCeeEe
Q 015758 117 TGLAVEAASRALQMAEVNPEDVD----LVLMCTSTPED-------------------LF-GGATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id----~li~~t~~~~~-------------------~~-~~a~~i~~~lGl~~~~~~~~ 172 (401)
..|+.+++++||+++|+++++|| .+++++++.++ .. ..+.+|+..||++ .++++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC--CCeee
Confidence 89999999999999999999998 78888776542 01 1378999999994 69999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC------------------CCCCCCCCccccccceeEEEEEeec
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR------------------FTDWTDRGSCILFGDAAGAVLVQAC 234 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~------------------~~~~~dr~~~~lfGDGAaAvll~~~ 234 (401)
|+++|+|++.||++|.+.|++|+++.+|++|+|.++. .-.|.++...+.+|||++++||++.
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGagavvL~~l 238 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKK 238 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEEEEEEEEG
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEEEEEEecH
Confidence 9999999999999999999999999999999998752 1123334456789999999999985
Q ss_pred cCCCC---CeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHH
Q 015758 235 DSEDD---GLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESAL 311 (401)
Q Consensus 235 ~~~~~---gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL 311 (401)
+.... -|.++...+||.....+ ..|. .....++|+++|
T Consensus 239 ~~A~~i~a~I~g~~~n~dg~~~~~~--------------------t~P~-------------------~~~q~~~i~~Al 279 (965)
T 3hhd_A 239 SLARRVYATILNAGTNTDGFKEQGV--------------------TFPS-------------------GDIQEQLIRSLY 279 (965)
T ss_dssp GGCSSCSEEEEEEEEEECCCCTTCT--------------------TSCC-------------------HHHHHHHHHHHH
T ss_pred HHcCcccEEEEeeeccCCCCCCCCC--------------------cCCC-------------------HHHHHHHHHHHH
Confidence 43221 13344444444211111 0111 123458899999
Q ss_pred HHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCch-hhh--hcccccCccccChHHHHHHHHH---HcCCC----
Q 015758 312 EKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPME-RVI--SNLANYGNTSAASIPLALDEAV---RSGKV---- 376 (401)
Q Consensus 312 ~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e-~~~--~~l~~~Gn~~sasi~~~L~~~l---~~g~~---- 376 (401)
+++|++++|||++..|..+...-|. +.+.++-..+ .+. ....++||+.+|+-...|...+ +++.+
T Consensus 280 ~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~ 359 (965)
T 3hhd_A 280 QSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNL 359 (965)
T ss_dssp HHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCS
T ss_pred HHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCcc
Confidence 9999999999999999988766554 4455653322 222 3556889999888776655443 23311
Q ss_pred -------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 377 -------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 377 -------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+..++++.+||.|.+-+.++|+
T Consensus 360 ~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~ 407 (965)
T 3hhd_A 360 HFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILR 407 (965)
T ss_dssp SCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEE
T ss_pred CCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEec
Confidence 12346788999999999999986
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=199.00 Aligned_cols=248 Identities=19% Similarity=0.193 Sum_probs=175.2
Q ss_pred CCCCHHHHHHHHHHHHHHh-CCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQM-AEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+++..+|+.+|++++|++ +|++|+|||.|++++.+++.. +..+.+++..+|++...++++|+++|+|++.+|..|.
T Consensus 28 ~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A~ 107 (407)
T 3svk_A 28 TEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAA 107 (407)
T ss_dssp TTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEecCcChhHHHHHHHHH
Confidence 4678999999999999999 999999999999999887653 3468999999999767999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCC----------------------------------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRF---------------------------------------------------------- 210 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~---------------------------------------------------------- 210 (401)
++|++|.++.|||+++|.+|+.
T Consensus 108 ~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~ 187 (407)
T 3svk_A 108 QKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWS 187 (407)
T ss_dssp HHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988741
Q ss_pred -------------------CCCC-------------------C---------------------------CCccccccce
Q 015758 211 -------------------TDWT-------------------D---------------------------RGSCILFGDA 225 (401)
Q Consensus 211 -------------------~~~~-------------------d---------------------------r~~~~lfGDG 225 (401)
+++. + ...+..++||
T Consensus 188 ~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DG 267 (407)
T 3svk_A 188 GGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDG 267 (407)
T ss_dssp TTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEE
T ss_pred cCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCc
Confidence 0000 0 0123358899
Q ss_pred eEEEEEeeccC-CCCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHH
Q 015758 226 AGAVLVQACDS-EDDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303 (401)
Q Consensus 226 AaAvll~~~~~-~~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~ 303 (401)
|+|+||++.+. .+.|.-. ..+...+.... -|. .... ..
T Consensus 268 AaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----------------------~p~-------~~~~----------~~ 307 (407)
T 3svk_A 268 AALVLVGSEKAGKSQGLTPRARIVATATSGS-----------------------DPV-------IMLT----------GP 307 (407)
T ss_dssp EEEEEEECHHHHHHTTCCCCEEEEEEEEC------------------------------------CCC----------TH
T ss_pred eeEEEEeeHHHHHHcCCCCcEEEEEEEEecc-----------------------CCc-------cccH----------HH
Confidence 99999987541 1111100 01111000000 000 0000 12
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHT 381 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ 381 (401)
..+++++|+++|++++|||++.+|+.+........+.||+++++++.+ ..-+||+..++-...+.+++.+-+-+.+.+
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~ 387 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNARR 387 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCCCE
Confidence 377899999999999999999999999998888889999999988643 346899988886666666555422234567
Q ss_pred EEEEeeehhhhheeeEEE
Q 015758 382 IAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 382 ill~~~G~G~s~~a~llr 399 (401)
.+...++.|....+++|+
T Consensus 388 gl~~~c~ggG~g~a~~~e 405 (407)
T 3svk_A 388 ALITLCIGGGMGVATIIE 405 (407)
T ss_dssp EEEEEECSSSCEEEEEEE
T ss_pred EEEEeeccCcceEEEEEE
Confidence 777777777787888876
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=211.20 Aligned_cols=292 Identities=22% Similarity=0.246 Sum_probs=205.5
Q ss_pred cCCeEEEEEEEEcCCCccChHHHHhhh--CC------chh--h------------------hhhhcCcceeEecCCCCCH
Q 015758 65 NRGCKLVGCGSAVPTLQISNDDLAKIV--DT------SDE--W------------------ISVRTGIRNRRVLSGKESL 116 (401)
Q Consensus 65 ~~~v~I~gig~~lP~~~v~~~~l~~~~--~~------~~~--~------------------i~~~~Gi~~R~~~~~~e~~ 116 (401)
.++|.|+|+|+.+|...-+.+++++.+ +. +.+ | ....+||..|..... +..
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~m-dp~ 116 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPDPDARLGGMLAAAGDFDAGFFGISPREALAM-DPQ 116 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCCCSSCCEEBCCTTTTEECTGGGTCCHHHHHHS-CHH
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCCCCCcceeeEecCccccChhhcCCCHHHHHhc-CHH
Confidence 467999999999998776788888754 11 111 1 112344444433222 367
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCE----EEEEecCCCCCC--------------------chHHHHHHHcCCCCCCeeEe
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDL----VLMCTSTPEDLF--------------------GGATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~----li~~t~~~~~~~--------------------~~a~~i~~~lGl~~~~~~~~ 172 (401)
.+|+.+++++||+++|+++++||. |+++++.+++.. ..+.+|+..||++ .++++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC--CCeEe
Confidence 899999999999999999999985 788887765431 1367999999994 58999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC-----------C-------CCCCCccccccceeEEEEEeec
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT-----------D-------WTDRGSCILFGDAAGAVLVQAC 234 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~-----------~-------~~dr~~~~lfGDGAaAvll~~~ 234 (401)
|+++|+|++.||++|.++|++|+++.+||+++|.++... . +..+..++++||||+|+||++.
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL~~l 274 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQRL 274 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEEEEH
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEEeeH
Confidence 999999999999999999999999999999999875321 0 1223356799999999999875
Q ss_pred cC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHH
Q 015758 235 DS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTI 307 (401)
Q Consensus 235 ~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i 307 (401)
+. +++. |.++...+||... +. ..| + .....+++
T Consensus 275 ~~A~~~g~~i~a~I~G~~~~~dg~~~-------------------~~--~~P-----------~--------~~~q~~ai 314 (917)
T 2hg4_A 275 SAARREGRPVLAVLRGSAVNQDGASN-------------------GL--TAP-----------S--------GPAQQRVI 314 (917)
T ss_dssp HHHHHTTCCCCEEEEEEEEEECCSCS-------------------SS--SCC-----------C--------HHHHHHHH
T ss_pred HHHHhCCCCeEEEEEEEEEecCCCcc-------------------CC--CCC-----------C--------HHHHHHHH
Confidence 31 1222 3334444443210 00 011 1 13456889
Q ss_pred HHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCch---hhh--hcccccCccccChHHHHHHHHHH---cC
Q 015758 308 ESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPME---RVI--SNLANYGNTSAASIPLALDEAVR---SG 374 (401)
Q Consensus 308 ~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e---~~~--~~l~~~Gn~~sasi~~~L~~~l~---~g 374 (401)
+++|+++|++++|||++..|..+..+.|. +.+.+|.... .+. ....++||+.+|+-...|..++. .+
T Consensus 315 ~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~ 394 (917)
T 2hg4_A 315 RRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHG 394 (917)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcC
Confidence 99999999999999999999998876554 4455665321 122 35578999998887776665543 22
Q ss_pred CC-----------------------------C---CCCEEEEEeeehhhhheeeEEE
Q 015758 375 KV-----------------------------K---PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~-----------------------------~---~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+ + .-.+.++.+||.|.+-+.++|+
T Consensus 395 ~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~ 451 (917)
T 2hg4_A 395 EMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVE 451 (917)
T ss_dssp EECCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEE
T ss_pred CcCCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEec
Confidence 21 0 1256789999999999999986
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-21 Score=192.41 Aligned_cols=259 Identities=21% Similarity=0.140 Sum_probs=184.1
Q ss_pred hcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccCh
Q 015758 101 RTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACS 178 (401)
Q Consensus 101 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~ 178 (401)
+|.+.+|+....+++..+|+.+|+++||+++|+++++||.|++++++++.. +..+.+|+..||++.+.++++++++|+
T Consensus 11 rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCa 90 (401)
T 1ulq_A 11 RTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCG 90 (401)
T ss_dssp ECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred cCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeeccccch
Confidence 456666665556789999999999999999999999999999999887654 346899999999965689999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC------------------C---------------C------------
Q 015758 179 GFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT------------------D---------------W------------ 213 (401)
Q Consensus 179 ~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~------------------~---------------~------------ 213 (401)
|++.+|..|.++|++|.++.+|++++|.++... + +
T Consensus 91 s~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~ 170 (401)
T 1ulq_A 91 SGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENL 170 (401)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHH
Confidence 999999999999999999999999999876410 0 0
Q ss_pred -------------------------------CC----------------------------------CC----cccc---
Q 015758 214 -------------------------------TD----------------------------------RG----SCIL--- 221 (401)
Q Consensus 214 -------------------------------~d----------------------------------r~----~~~l--- 221 (401)
.+ |. ..++
T Consensus 171 ~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~~G~vt~~ 250 (401)
T 1ulq_A 171 AEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAG 250 (401)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGG
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCCCCCeech
Confidence 00 00 0012
Q ss_pred ----ccceeEEEEEeeccC-CCCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHH
Q 015758 222 ----FGDAAGAVLVQACDS-EDDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEV 295 (401)
Q Consensus 222 ----fGDGAaAvll~~~~~-~~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v 295 (401)
++|||+|+||++.+. .+.|.-. ..+...+.. . +-|. . + +
T Consensus 251 ~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~--------~---------------~~p~----~----~-~--- 295 (401)
T 1ulq_A 251 NSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVA--------G---------------VPPR----I----M-G--- 295 (401)
T ss_dssp GBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEE--------E---------------CCGG----G----G-G---
T ss_pred hcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEe--------c---------------CCcc----c----c-c---
Confidence 599999999987542 1111100 111110000 0 0000 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCC--Cchhhhhc--ccccCccccChHHHHHHHHH
Q 015758 296 FRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDV--PMERVISN--LANYGNTSAASIPLALDEAV 371 (401)
Q Consensus 296 ~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl--~~e~~~~~--l~~~Gn~~sasi~~~L~~~l 371 (401)
.....+++++|+++|++++|||++-+|-......-...+.||+ +.++++.+ ...+||+..|+-...+.+++
T Consensus 296 -----~~~~~a~~~al~~Agl~~~dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~ 370 (401)
T 1ulq_A 296 -----IGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLV 370 (401)
T ss_dssp -----GTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHH
T ss_pred -----hhHHHHHHHHHHHcCCCHHHcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHH
Confidence 1224789999999999999999999999887544444567998 55555422 33689998777666666655
Q ss_pred HcCCCCCCCEEEEEeeehhhhheeeEEE
Q 015758 372 RSGKVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+-+-+.+++.|..++|.|....+++|+
T Consensus 371 ~~L~~~~~~~gl~~~~~ggG~~~a~v~~ 398 (401)
T 1ulq_A 371 HEMRRRKVQFGLATMCIGVGQGIAVVVE 398 (401)
T ss_dssp HHHHHTTCSEEEEEEEETTTEEEEEEEE
T ss_pred HHHhhcCCCEEEEEeecCCcccEEEEEE
Confidence 5322235677888888888888888886
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=192.83 Aligned_cols=283 Identities=17% Similarity=0.222 Sum_probs=196.8
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCcceeEe---------------cCCCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGIRNRRV---------------LSGKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi~~R~~---------------~~~~e~~~~la~~Aa 124 (401)
.|.|+|+|+..|.. .+.+++++.+ +.+ +.|-. .++..+.. ...-+...+|+.+|+
T Consensus 3 ~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~--~~~~~~~~~~v~fd~~~~~~~~~~~~~d~~~~l~l~aa 79 (406)
T 2vba_A 3 RAVITGLGIVSSIG-NNQQEVLASLREGRSGITFSQELKD--SGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSM 79 (406)
T ss_dssp CEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHHH--TTCSCCEEECCCCCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred CEEEEeeEEECCCC-CCHHHHHHHHHcCCCeEEeCCcccc--cCCccceEEEecCChhhcCCHHHHHhcCHHHHHHHHHH
Confidence 58999999999988 5888888754 221 12211 11111110 011135789999999
Q ss_pred HHHHHhCCCCcCCCCE-----EEEEecCCCC---------------------------CC-chHHHHHHHcCCCCCCeeE
Q 015758 125 SRALQMAEVNPEDVDL-----VLMCTSTPED---------------------------LF-GGATQIPKALGCKNNPLAY 171 (401)
Q Consensus 125 ~~aL~~agi~~~~Id~-----li~~t~~~~~---------------------------~~-~~a~~i~~~lGl~~~~~~~ 171 (401)
++||+++|+++++||. |+++++.++. .. ..+.+|+..||++ .+++
T Consensus 80 ~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~--Gp~~ 157 (406)
T 2vba_A 80 EQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIH--GVNY 157 (406)
T ss_dssp HHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCC--SCEE
T ss_pred HHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCC--Ccee
Confidence 9999999999988885 8888876542 01 2478999999994 6999
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------C------------C-CCCCCccccccceeEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF----------T------------D-WTDRGSCILFGDAAGA 228 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~----------~------------~-~~dr~~~~lfGDGAaA 228 (401)
+|+++|+|++.||..|.++|++|.++.+||+++|.++.. + + +..+..++++||||++
T Consensus 158 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGaaa 237 (406)
T 2vba_A 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237 (406)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEEE
T ss_pred eeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCcCCCCceEeeceEEE
Confidence 999999999999999999999999999999999986421 1 1 1122346789999999
Q ss_pred EEEeeccC---CCCC----eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHH
Q 015758 229 VLVQACDS---EDDG----LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301 (401)
Q Consensus 229 vll~~~~~---~~~g----l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~ 301 (401)
+||++.+. .+.. +.++...+|+. ++. .|. + .
T Consensus 238 vvL~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~t--------------------~p~-----------~--------~ 275 (406)
T 2vba_A 238 VVVEELEHALARGAHIYAEIVGYGATSDGA---DMV--------------------APS-----------G--------E 275 (406)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCS---CTT--------------------SCC-----------S--------H
T ss_pred EEeCcHHHHHHCCCeEEEEEEEEEEcCCCC---CCC--------------------CCC-----------H--------H
Confidence 99997541 1122 33444444432 110 111 1 2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhhhhcccccCccccChHHHHHHHHHH---c
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERVISNLANYGNTSAASIPLALDEAVR---S 373 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~---~ 373 (401)
...++++++|+++| +|||++..|+.+..+.|. +.+.++...-.+..+...+||+.+|+-.+.+..++. .
T Consensus 276 ~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~ 352 (406)
T 2vba_A 276 GAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEH 352 (406)
T ss_dssp HHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEECTHHHHCBCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHHHHHHHHHhCcCCCceeCchhhhcccHHHHHHHHHHHHHHHHhc
Confidence 45588999999999 899999999999887554 445566432122234567899999988776655543 3
Q ss_pred CCC-------------C-----------CCCEEEEEeeehhhhheeeEEE
Q 015758 374 GKV-------------K-----------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 374 g~~-------------~-----------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+.+ . .-.+++..+||.|.+..+++|+
T Consensus 353 ~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~ 402 (406)
T 2vba_A 353 GFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMR 402 (406)
T ss_dssp TEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEE
T ss_pred CccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEE
Confidence 321 1 1256788999999999999986
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=187.87 Aligned_cols=248 Identities=19% Similarity=0.137 Sum_probs=180.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+++..+|+.+|++++|+++|+++++||.+++++..+... ...+.+++..+|++...++++++++|+|++.+|..|.++
T Consensus 23 ~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSgl~Al~~A~~~ 102 (392)
T 2vu1_A 23 ANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102 (392)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceEEEecccchHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998877543 346899999999964489999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCC-----------------C-----------------------------------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFT-----------------D----------------------------------------- 212 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~-----------------~----------------------------------------- 212 (401)
|++|.++.+|++++|.++... +
T Consensus 103 I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s 182 (392)
T 2vu1_A 103 IATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182 (392)
T ss_dssp HHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 999999999999999875310 0
Q ss_pred ------------CC-------------------C---C----------------Ccccc-------ccceeEEEEEeecc
Q 015758 213 ------------WT-------------------D---R----------------GSCIL-------FGDAAGAVLVQACD 235 (401)
Q Consensus 213 ------------~~-------------------d---r----------------~~~~l-------fGDGAaAvll~~~~ 235 (401)
+. | | ...++ +||||+|+||++.+
T Consensus 183 ~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~ 262 (392)
T 2vu1_A 183 QNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEA 262 (392)
T ss_dssp HHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHH
T ss_pred HHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCCccChhheeeEecHH
Confidence 00 0 0 01345 99999999999754
Q ss_pred CC-CCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHH
Q 015758 236 SE-DDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEK 313 (401)
Q Consensus 236 ~~-~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~ 313 (401)
.. +.|.-. ..+...+. .+ . -|. . .+ .....+++++|++
T Consensus 263 ~A~~~g~~~~a~i~g~~~--~~-----~----------------~p~-~--------~~--------~~~~~a~~~al~~ 302 (392)
T 2vu1_A 263 EASRRGIQPLGRIVSWAT--VG-----V----------------DPK-V--------MG--------TGPIPASRKALER 302 (392)
T ss_dssp HHHHHTCCCSEEEEEEEE--EE-----C----------------CGG-G--------GG--------GTHHHHHHHHHHH
T ss_pred HHHhcCCCccEEEEEEEE--ee-----c----------------Chh-h--------cc--------hhHHHHHHHHHHH
Confidence 21 111100 11111000 00 0 000 0 00 1234789999999
Q ss_pred cCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhh
Q 015758 314 AGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGL 391 (401)
Q Consensus 314 agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~ 391 (401)
+|++++|||++.+|.........+.+.||++++++.. ....+||+..++-...+.+++.+-+-+.+.+.+...++.|.
T Consensus 303 agl~~~dId~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG 382 (392)
T 2vu1_A 303 AGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGG 382 (392)
T ss_dssp HTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTCSEEEEEEEETTT
T ss_pred cCCCHHHcCEEEeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCCCEEEEEEecccc
Confidence 9999999999999999988777788999999888753 34589999998888777776654222345666655544566
Q ss_pred hheeeEEE
Q 015758 392 TWGSAILR 399 (401)
Q Consensus 392 s~~a~llr 399 (401)
...+++|+
T Consensus 383 ~~~a~~~e 390 (392)
T 2vu1_A 383 MGVAMCIE 390 (392)
T ss_dssp EEEEEEEE
T ss_pred hheEEEEE
Confidence 77888876
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-20 Score=186.89 Aligned_cols=248 Identities=20% Similarity=0.127 Sum_probs=180.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
+++..+|+.+|+++||+++|+++++||.+++++++++... ..+.+|+..+|++...++++++++|+|++.||..|.++|
T Consensus 27 ~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSg~~Ai~~A~~~I 106 (397)
T 1wl4_A 27 AVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSI 106 (397)
T ss_dssp TSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccEEEecCcChhHHHHHHHHHHHH
Confidence 5678999999999999999999999999999988775433 468999999999656899999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCC-----------------CC------------------------------------------
Q 015758 192 RGGGFRNVLVIGGDALSRF-----------------TD------------------------------------------ 212 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~-----------------~~------------------------------------------ 212 (401)
++|.++.+|++++|.++.. .+
T Consensus 107 ~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~ 186 (397)
T 1wl4_A 107 GIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQ 186 (397)
T ss_dssp HTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 9999999999999987631 00
Q ss_pred -------------------------------------------------C-CCCC-cccc-------ccceeEEEEEeec
Q 015758 213 -------------------------------------------------W-TDRG-SCIL-------FGDAAGAVLVQAC 234 (401)
Q Consensus 213 -------------------------------------------------~-~dr~-~~~l-------fGDGAaAvll~~~ 234 (401)
+ .|+. ..++ +||||+|+||++.
T Consensus 187 ~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~ 266 (397)
T 1wl4_A 187 NRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKK 266 (397)
T ss_dssp HHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEH
T ss_pred HHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecH
Confidence 0 0110 0234 8999999999875
Q ss_pred cC-CCCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHH
Q 015758 235 DS-EDDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALE 312 (401)
Q Consensus 235 ~~-~~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~ 312 (401)
+. .+.|.-. ..+...+. .+ . .|. . .+ .....+++++|+
T Consensus 267 ~~A~~~g~~~~a~i~g~~~--~~-----~----------------~p~-~--------~~--------~~~~~a~~~al~ 306 (397)
T 1wl4_A 267 SEADKRGLTPLARIVSWSQ--VG-----V----------------EPS-I--------MG--------IGPIPAIKQAVT 306 (397)
T ss_dssp HHHHHTTCCCSEEEEEEEE--EE-----C----------------CGG-G--------GG--------GTHHHHHHHHHH
T ss_pred HHHHHcCCCccEEEEEEEE--ee-----c----------------Chh-h--------cc--------chHHHHHHHHHH
Confidence 41 1111100 11111000 00 0 000 0 00 123478999999
Q ss_pred HcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehh
Q 015758 313 KAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAG 390 (401)
Q Consensus 313 ~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G 390 (401)
++|++++|||+|.+|.........+.+.||+++++++. ....+||+..++-...+.+++.+-+-+.+.+.+...++.|
T Consensus 307 ~Agl~~~dId~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~gg 386 (397)
T 1wl4_A 307 KAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRGVAALCIGG 386 (397)
T ss_dssp HHTCCGGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETT
T ss_pred HcCCCHHHCCEEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCCCEEEEEEeccc
Confidence 99999999999999999988888899999999888753 3568899988876666555554322124567777767777
Q ss_pred hhheeeEEEe
Q 015758 391 LTWGSAILRW 400 (401)
Q Consensus 391 ~s~~a~llr~ 400 (401)
....+++|+.
T Consensus 387 G~~~a~~~e~ 396 (397)
T 1wl4_A 387 GMGIAMCVQR 396 (397)
T ss_dssp TEEEEEEEEE
T ss_pred chheEEEEEe
Confidence 7778888874
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-20 Score=184.79 Aligned_cols=258 Identities=14% Similarity=0.018 Sum_probs=180.9
Q ss_pred hcCccee-EecCCCCCHHHHHHHHHHHHHHhCC----CCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeC
Q 015758 101 RTGIRNR-RVLSGKESLTGLAVEAASRALQMAE----VNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDIT 174 (401)
Q Consensus 101 ~~Gi~~R-~~~~~~e~~~~la~~Aa~~aL~~ag----i~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~ 174 (401)
+|.+.+| +....+++..+|+.+|+++||+++| +++++||.|++++.+++... ..+.+++..+|++.+.++++|+
T Consensus 19 rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~ 98 (393)
T 1afw_A 19 RSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALN 98 (393)
T ss_dssp ECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEE
T ss_pred cCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEEc
Confidence 3445555 2455678999999999999999999 99999999999998776543 3589999999996568999999
Q ss_pred ccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC--CC---------------CC------------------------
Q 015758 175 AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR--FT---------------DW------------------------ 213 (401)
Q Consensus 175 ~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~--~~---------------~~------------------------ 213 (401)
++|+|++.+|..|.++|++|.++.+|++++|.++. +. .+
T Consensus 99 ~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre 178 (393)
T 1afw_A 99 RQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRK 178 (393)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHH
T ss_pred CcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHH
Confidence 99999999999999999999999999999997542 00 00
Q ss_pred ----------------------------------------------------------CCCCcccc-------ccceeEE
Q 015758 214 ----------------------------------------------------------TDRGSCIL-------FGDAAGA 228 (401)
Q Consensus 214 ----------------------------------------------------------~dr~~~~l-------fGDGAaA 228 (401)
.|+...++ ++|||+|
T Consensus 179 ~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~~~dGAaa 258 (393)
T 1afw_A 179 DQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAG 258 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEE
T ss_pred HHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCCCCeechhcCcccchhhe
Confidence 00000112 6999999
Q ss_pred EEEeeccC-CCCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHH
Q 015758 229 VLVQACDS-EDDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306 (401)
Q Consensus 229 vll~~~~~-~~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~ 306 (401)
+||++.+. .+.|.-. ..+...+.. . +-| .. .+ .....+
T Consensus 259 vvL~s~~~A~~~g~~~~a~i~g~~~~--------~---------------~~p----~~-----~~--------~~~~~a 298 (393)
T 1afw_A 259 VLLARRSVANQLNLPVLGRYIDFQTV--------G---------------VPP----EI-----MG--------VGPAYA 298 (393)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEE--------E---------------CCG----GG-----GG--------GHHHHH
T ss_pred eeEecHHHHHHcCCCccEEEEEEEEe--------c---------------cCh----hh-----cc--------hhHHHH
Confidence 99997542 1111100 111110000 0 000 00 00 122478
Q ss_pred HHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCCCCEEEE
Q 015758 307 IESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKPGHTIAA 384 (401)
Q Consensus 307 i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill 384 (401)
++++|+++|++++|||++-.|-.....--...+.||+++++++.+ ..-+||+..|+-...+.+++.+-+-+.| .+.
T Consensus 299 ~~~al~~Agl~~~dId~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--gl~ 376 (393)
T 1afw_A 299 IPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI--GVV 376 (393)
T ss_dssp HHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE--EEE
T ss_pred HHHHHHHcCCCHHHCCEEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC--cEE
Confidence 999999999999999999999998865555567899998877533 2358999999988888888876433333 444
Q ss_pred EeeehhhhheeeEEEe
Q 015758 385 AGFGAGLTWGSAILRW 400 (401)
Q Consensus 385 ~~~G~G~s~~a~llr~ 400 (401)
..++.|....+++++.
T Consensus 377 ~~c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 377 SMCIGTGMGAAAIFIK 392 (393)
T ss_dssp EEEETTTEEEEEEEEE
T ss_pred EEeecccceEEEEEEe
Confidence 4444455556777764
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=186.64 Aligned_cols=247 Identities=18% Similarity=0.142 Sum_probs=178.5
Q ss_pred CCCCHHHHHHHHHHHHHHhC-CCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMA-EVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+++..+|+.+|++++|+++ |+++++||.+++++++++.. ...+.+|+..+|++...++++++++|+|++.+|..|.
T Consensus 26 ~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaS~~~Al~~A~ 105 (390)
T 1wdk_C 26 RNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAA 105 (390)
T ss_dssp TTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCccEEEEcccchhHHHHHHHHH
Confidence 46789999999999999999 99999999999998877654 3468999999999667899999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCC-------C-------------------------------------------------
Q 015758 189 CHIRGGGFRNVLVIGGDALSRFT-------D------------------------------------------------- 212 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~~-------~------------------------------------------------- 212 (401)
++|++|.++.+|++++|.++... +
T Consensus 106 ~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~ 185 (390)
T 1wdk_C 106 QAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVE 185 (390)
T ss_dssp HHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999875310 1
Q ss_pred --CC--------------------C--------------------CCcccc-------ccceeEEEEEeeccC-CCCC--
Q 015758 213 --WT--------------------D--------------------RGSCIL-------FGDAAGAVLVQACDS-EDDG-- 240 (401)
Q Consensus 213 --~~--------------------d--------------------r~~~~l-------fGDGAaAvll~~~~~-~~~g-- 240 (401)
+. | +...++ +||||+|+||++.+. .+.|
T Consensus 186 g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~ 265 (390)
T 1wdk_C 186 GKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLE 265 (390)
T ss_dssp TTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCC
T ss_pred CCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCC
Confidence 00 0 012236 999999999997541 1111
Q ss_pred eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCC
Q 015758 241 LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSS 320 (401)
Q Consensus 241 l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~d 320 (401)
++ ..+...+. .+ . -|. . .+ .....+++++|+++|++++|
T Consensus 266 ~~-a~I~g~~~--~~-----~----------------~p~----~-----~~--------~~~~~a~~~al~~Agl~~~d 304 (390)
T 1wdk_C 266 PL-AVIRSMAV--AG-----V----------------DPA----I-----MG--------YGPVPATQKALKRAGLNMAD 304 (390)
T ss_dssp CS-EEEEEEEE--EE-----C----------------CGG----G-----GG--------GTHHHHHHHHHHHHTCCGGG
T ss_pred cc-EEEEEEEE--ec-----c----------------Chh----h-----cc--------hhHHHHHHHHHHHcCCChhh
Confidence 11 11111000 00 0 000 0 00 12247899999999999999
Q ss_pred cCEEEecccCHHHHHHHHHHcCCC---chhhhh--cccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhhee
Q 015758 321 IDWLLLHQANQRIIDAVANRLDVP---MERVIS--NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGS 395 (401)
Q Consensus 321 Id~~i~Hq~~~~i~~~i~~~lgl~---~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a 395 (401)
||++.+|.........+.+.||++ .++++. ....+||+..++-...+.+++.+-+-+.+.+.+...++.|....+
T Consensus 305 Id~ve~~d~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a 384 (390)
T 1wdk_C 305 IDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIA 384 (390)
T ss_dssp CCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEE
T ss_pred CcEEEeccCCHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCCCEEEEEecccchheEE
Confidence 999999999987777888999998 555542 345889999888655555554432223456667666666777778
Q ss_pred eEEE
Q 015758 396 AILR 399 (401)
Q Consensus 396 ~llr 399 (401)
++|+
T Consensus 385 ~~~~ 388 (390)
T 1wdk_C 385 TVFE 388 (390)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.8e-20 Score=182.43 Aligned_cols=246 Identities=14% Similarity=0.107 Sum_probs=180.0
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACH 190 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~ 190 (401)
.+++..+|+.+|++++|+++|+++++||.+++++..++... ..+.+++..+|++.+.++++++++|+|++.||..|.++
T Consensus 28 ~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~ 107 (395)
T 2ib8_A 28 SLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQS 107 (395)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceEEEecccccHHHHHHHHHHHH
Confidence 46789999999999999999999999999999988775543 46899999999955689999999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCCCC------------------------------------------C--C------------
Q 015758 191 IRGGGFRNVLVIGGDALSRFTD------------------------------------------W--T------------ 214 (401)
Q Consensus 191 l~~g~~~~vLvv~~d~~s~~~~------------------------------------------~--~------------ 214 (401)
|++|.++.+||+++|.++.... + +
T Consensus 108 I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~ 187 (395)
T 2ib8_A 108 LMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSY 187 (395)
T ss_dssp HHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 9999999999999997653100 0 0
Q ss_pred ------------------------------------------C----------CCcccc-------ccceeEEEEEeecc
Q 015758 215 ------------------------------------------D----------RGSCIL-------FGDAAGAVLVQACD 235 (401)
Q Consensus 215 ------------------------------------------d----------r~~~~l-------fGDGAaAvll~~~~ 235 (401)
| +...++ .||||+|+||++.+
T Consensus 188 ~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~ 267 (395)
T 2ib8_A 188 TRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTAD 267 (395)
T ss_dssp HHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHH
T ss_pred HHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHH
Confidence 0 001234 89999999999754
Q ss_pred C-CCCCeeE-EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHH
Q 015758 236 S-EDDGLIS-FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEK 313 (401)
Q Consensus 236 ~-~~~gl~~-~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~ 313 (401)
. .+.|.-. ..+...+. .+ + -|.. .+ .....+++++|++
T Consensus 268 ~A~~~g~~~~a~I~g~~~--~~---------~------------~p~~---------~~--------~~~~~a~~~al~~ 307 (395)
T 2ib8_A 268 AAKRLNVTPLARIVAFAD--AA---------V------------EPID---------FP--------IAPVYAASMVLKD 307 (395)
T ss_dssp HHHHTTCCCCEEEEEEEE--EE---------C------------CGGG---------GG--------GHHHHHHHHHHHH
T ss_pred HHHhcCCCccEEEEEEEE--ec---------c------------Chhh---------cc--------ccHHHHHHHHHHH
Confidence 2 1111100 11111000 00 0 0000 00 1234789999999
Q ss_pred cCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh--cccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhh
Q 015758 314 AGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS--NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGL 391 (401)
Q Consensus 314 agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~ 391 (401)
+|++++|||++.+|.......-...+.||+++++++. ....+||+..|+-...+.+++.+ ++.|++.+...++.|.
T Consensus 308 Agl~~~dId~ie~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~--L~~~~~gl~~~~~ggG 385 (395)
T 2ib8_A 308 VGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHA--LKQGEYGLASICNGGG 385 (395)
T ss_dssp HTCCGGGEEEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHH--SCTTCEEEEEEEETTT
T ss_pred cCCCHHHcCEEEEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHH--HhhCCceEEEEecccC
Confidence 9999999999999999887666666779999887753 34589999999988888888875 3347776665555566
Q ss_pred hheeeEEE
Q 015758 392 TWGSAILR 399 (401)
Q Consensus 392 s~~a~llr 399 (401)
...+++|+
T Consensus 386 ~g~a~~~~ 393 (395)
T 2ib8_A 386 GASAMLIQ 393 (395)
T ss_dssp EEEEEEEE
T ss_pred HhheEEEE
Confidence 66677775
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-20 Score=185.48 Aligned_cols=252 Identities=17% Similarity=0.172 Sum_probs=176.4
Q ss_pred cCcceeE-ecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccCh
Q 015758 102 TGIRNRR-VLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACS 178 (401)
Q Consensus 102 ~Gi~~R~-~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~ 178 (401)
|.|.+|+ ....+++..+|+.+|+++||+++|+++++||.|++++++++.. +..+.+++..||++...++++|+++|+
T Consensus 40 T~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCa 119 (442)
T 2wu9_A 40 TPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCS 119 (442)
T ss_dssp CCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCEEEEECGGG
T ss_pred CCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceEEEeCCcCH
Confidence 3344443 3445789999999999999999999999999999998876543 235889999999965689999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC-----------------------------------------------
Q 015758 179 GFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT----------------------------------------------- 211 (401)
Q Consensus 179 ~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~----------------------------------------------- 211 (401)
|++.+|..|.++|++|.++.||++++|.++...
T Consensus 120 Sg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~ 199 (442)
T 2wu9_A 120 SGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAV 199 (442)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999999999999999999999999876411
Q ss_pred -------------CCCC---------------------------------------------CC------ccccccceeE
Q 015758 212 -------------DWTD---------------------------------------------RG------SCILFGDAAG 227 (401)
Q Consensus 212 -------------~~~d---------------------------------------------r~------~~~lfGDGAa 227 (401)
.+.+ +. .+..++|||+
T Consensus 200 ~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~~DGAa 279 (442)
T 2wu9_A 200 DSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAG 279 (442)
T ss_dssp HHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCCEEEEE
T ss_pred HHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCCCCceE
Confidence 0000 00 0112599999
Q ss_pred EEEEeeccCC-CCC------eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHH
Q 015758 228 AVLVQACDSE-DDG------LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAV 300 (401)
Q Consensus 228 Avll~~~~~~-~~g------l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~ 300 (401)
|+||++.+.. +.| |.++....+ -| .. .+
T Consensus 280 avvL~s~e~A~~~g~~~~a~I~g~~~~~~----------------------------~p----~~-----~~-------- 314 (442)
T 2wu9_A 280 AVLLMKRSVAMQKGLPVLGVFRTFAAVGV----------------------------DP----AI-----MG-------- 314 (442)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEEC----------------------------CG----GG-----GG--------
T ss_pred EEEEeeHHHHHHcCCCceEEEEEEEEecC----------------------------Cc----hh-----cc--------
Confidence 9999975421 111 111111100 00 00 00
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc--ccccCccccChHHHHHHHHHHcCCCCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN--LANYGNTSAASIPLALDEAVRSGKVKP 378 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~--l~~~Gn~~sasi~~~L~~~l~~g~~~~ 378 (401)
.....+++++|+++|++++|||+|-+|......--...+.||+++++++.+ ..-+||+..|+-...+.+++.+-+-+.
T Consensus 315 ~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~ 394 (442)
T 2wu9_A 315 IGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG 394 (442)
T ss_dssp GHHHHHHHHHHHHTTCCGGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCCHHHCCEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC
Confidence 122378999999999999999999999998876555567899998887532 235899987766666555544311112
Q ss_pred --CCEEEE-EeeehhhhheeeEEE
Q 015758 379 --GHTIAA-AGFGAGLTWGSAILR 399 (401)
Q Consensus 379 --Gd~ill-~~~G~G~s~~a~llr 399 (401)
+++.|. ..+| |....+++|+
T Consensus 395 ~~~~~glas~~~G-GG~~~a~v~~ 417 (442)
T 2wu9_A 395 KDCRFGVVSMCIG-TGMGAAAVFE 417 (442)
T ss_dssp TTCCEEEEEEEET-TTEEEEEEEE
T ss_pred CCCCEEEEEeecc-cchheEEEEE
Confidence 456663 4567 6666777775
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-16 Score=186.09 Aligned_cols=291 Identities=22% Similarity=0.298 Sum_probs=202.4
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhh--CC------chhh--------------------hhhhcCcceeEecCCCCCHH
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIV--DT------SDEW--------------------ISVRTGIRNRRVLSGKESLT 117 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~--~~------~~~~--------------------i~~~~Gi~~R~~~~~~e~~~ 117 (401)
++|.|+|+|+.+|.. .+.+++++.+ +. ...| ...++||..|..... +...
T Consensus 2 ~~iaI~G~~~~~p~~-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~-dpq~ 79 (2512)
T 2vz8_A 2 EEVVIAGMSGKLPES-ENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTM-DPQL 79 (2512)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTS-CHHH
T ss_pred CCEEEEeeeeeCCCC-CCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhc-CHHH
Confidence 368999999999984 6889998864 11 0111 112334444433322 3678
Q ss_pred HHHHHHHHHHHHhCCCCcCCCC----EEEEEecCCCC----------C-----Cc-----hHHHHHHHcCCCCCCeeEee
Q 015758 118 GLAVEAASRALQMAEVNPEDVD----LVLMCTSTPED----------L-----FG-----GATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id----~li~~t~~~~~----------~-----~~-----~a~~i~~~lGl~~~~~~~~i 173 (401)
.|+.+++++|||++|+++++++ .++++++..++ . .+ .+.+|+..+|+ +.+++.|
T Consensus 80 rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~tv 157 (2512)
T 2vz8_A 80 RMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSITI 157 (2512)
T ss_dssp HHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEEE
T ss_pred HHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCceee
Confidence 9999999999999999887653 56666654321 0 01 37899999999 4899999
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CCC-------CCCCCccccccceeEEEEEeecc
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FTD-------WTDRGSCILFGDAAGAVLVQACD 235 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~~-------~~dr~~~~lfGDGAaAvll~~~~ 235 (401)
+++|+|++.||++|.+.|++|+++.+|+.|++.+.. .+. |..+...+..|+|++++||++-+
T Consensus 158 ~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~~vLk~l~ 237 (2512)
T 2vz8_A 158 DTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLLTKKS 237 (2512)
T ss_dssp ECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEEEEEEEGG
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEEEEEEEHH
Confidence 999999999999999999999999999999997431 111 12223457899999999999854
Q ss_pred CCCC---CeeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHH
Q 015758 236 SEDD---GLISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALE 312 (401)
Q Consensus 236 ~~~~---gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~ 312 (401)
.... -|.++...+||....+++ .|. + ....++|+++|+
T Consensus 238 ~A~~i~a~i~g~~~n~dg~~~~~~t--------------------~P~-----------~--------~~q~~~i~~al~ 278 (2512)
T 2vz8_A 238 LARRVYATILNAGTNTDGSKEQGVT--------------------FPS-----------G--------DVQEQLIRSLYA 278 (2512)
T ss_dssp GCSCCSEEEEEEEEEECCCCTTCSS--------------------SCC-----------H--------HHHHHHHHTTSG
T ss_pred HCCcccEEEEEEEEcCCCCCCCCCC--------------------CCC-----------H--------HHHHHHHHHHHH
Confidence 3221 133444555542111111 121 1 344589999999
Q ss_pred HcCCCcCCcCEEEecccCHHHHHHH-----HHHcCCCch-hhh--hcccccCccccChHHHHHHHHH---HcCCCC----
Q 015758 313 KAGLTMSSIDWLLLHQANQRIIDAV-----ANRLDVPME-RVI--SNLANYGNTSAASIPLALDEAV---RSGKVK---- 377 (401)
Q Consensus 313 ~agl~~~dId~~i~Hq~~~~i~~~i-----~~~lgl~~e-~~~--~~l~~~Gn~~sasi~~~L~~~l---~~g~~~---- 377 (401)
++|++++|||++..|..+...-|.+ .+.++-... .+. ++..++||+-+|+-...|...+ +++.+.
T Consensus 279 ~ag~~p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~ 358 (2512)
T 2vz8_A 279 PAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLH 358 (2512)
T ss_dssp GGSSCTTSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSS
T ss_pred HcCCCHHHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCC
Confidence 9999999999999999998777754 455663322 122 4567999998888777765543 333111
Q ss_pred -------------------------CCCEEEEEeeehhhhheeeEEE
Q 015758 378 -------------------------PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 378 -------------------------~Gd~ill~~~G~G~s~~a~llr 399 (401)
+..++++.+||.|.+-+.++|+
T Consensus 359 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~ 405 (2512)
T 2vz8_A 359 YHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQ 405 (2512)
T ss_dssp CCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEE
T ss_pred CCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEc
Confidence 1346789999999999999986
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.1e-16 Score=182.92 Aligned_cols=268 Identities=16% Similarity=0.133 Sum_probs=181.0
Q ss_pred hhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCC--------EEEEEecCCC------------------
Q 015758 96 EWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVD--------LVLMCTSTPE------------------ 149 (401)
Q Consensus 96 ~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id--------~li~~t~~~~------------------ 149 (401)
+|....+||..|.....| ....|+.+|+++||+++|+++++|+ .++++++.+.
T Consensus 2628 ~FD~~~fgIs~rea~~mD-p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~ 2706 (3089)
T 3zen_D 2628 GFDPTVWGISPDMASSID-RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKP 2706 (3089)
T ss_dssp TCCTTTTTCCHHHHHHSC-HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCC
T ss_pred CCChhhcCCCHHHHHhcC-HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCcc
Confidence 455667888888766544 7899999999999999999999885 5777775421
Q ss_pred -C-----CCc-hHHHHHH-HcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC----------
Q 015758 150 -D-----LFG-GATQIPK-ALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFT---------- 211 (401)
Q Consensus 150 -~-----~~~-~a~~i~~-~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~---------- 211 (401)
. ... .+.++.. .+|++ .++++|+++|+|++.||++|.++|++|+++.+|++|+|.++...
T Consensus 2707 ~~~~~~~~~~~~aa~is~~~lGl~--GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~al 2784 (3089)
T 3zen_D 2707 NDILQEVLPNVVAAHVMQSYVGGY--GAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAAT 2784 (3089)
T ss_dssp TTHHHHTSTTHHHHHHHHHTTCCC--SCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCB
T ss_pred chhhccccccHHHHHHHHHHcCCC--CCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhh
Confidence 0 011 3566665 46993 79999999999999999999999999999999999999865210
Q ss_pred -----------------C-CCCCCccccccceeEEEEEeeccC---CCCCeeE----EEEeecCCCCCceeeeccCCCcc
Q 015758 212 -----------------D-WTDRGSCILFGDAAGAVLVQACDS---EDDGLIS----FDVHSDGEGGRHLNACIKGNQTN 266 (401)
Q Consensus 212 -----------------~-~~dr~~~~lfGDGAaAvll~~~~~---~~~gl~~----~~~~s~g~~~~~l~~~~~~~~~~ 266 (401)
+ +..+...+++||||+++||++.+. .+..++. ....+||. +...
T Consensus 2785 s~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~---~~~~-------- 2853 (3089)
T 3zen_D 2785 ADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGV---HTSI-------- 2853 (3089)
T ss_dssp CCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCC---CCCS--------
T ss_pred hcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCc---ccCc--------
Confidence 1 111234578999999999997531 1222322 22223332 1100
Q ss_pred cccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH--------HH
Q 015758 267 DALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA--------VA 338 (401)
Q Consensus 267 ~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~--------i~ 338 (401)
..|... .+ ..| .....++++++|+++|++++|||++..|..+..+.|. +.
T Consensus 2854 ----------~aP~~g-~~--~a~---------~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~ 2911 (3089)
T 3zen_D 2854 ----------PAPGLG-AL--GAA---------RGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIA 2911 (3089)
T ss_dssp ----------SCCCCG-GG--GGS---------TTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHH
T ss_pred ----------cCCchh-HH--hHh---------hhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHH
Confidence 011000 00 000 0112368899999999999999999999998776554 44
Q ss_pred HHcCCCc-hhhh--hcccccCccccChHHHHHHHH---HHcCCCCC-------------------------------CCE
Q 015758 339 NRLDVPM-ERVI--SNLANYGNTSAASIPLALDEA---VRSGKVKP-------------------------------GHT 381 (401)
Q Consensus 339 ~~lgl~~-e~~~--~~l~~~Gn~~sasi~~~L~~~---l~~g~~~~-------------------------------Gd~ 381 (401)
+.+|... +++. .....+||+.+|+-...|..+ ++++.+.+ -.+
T Consensus 2912 ~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~ 2991 (3089)
T 3zen_D 2912 DSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKA 2991 (3089)
T ss_dssp HHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCE
T ss_pred HHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCE
Confidence 5567654 2332 455689999888866655443 34443211 146
Q ss_pred EEEEeeehhhhheeeEEE
Q 015758 382 IAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 382 ill~~~G~G~s~~a~llr 399 (401)
.++.+||.|.+-+.++|+
T Consensus 2992 a~vnSfGfGG~NahvVle 3009 (3089)
T 3zen_D 2992 GLVTSLGFGHVSGLVALV 3009 (3089)
T ss_dssp EEEEEEETTTEEEEEEEE
T ss_pred EEEccccCCCCeEEEEEe
Confidence 789999999999999886
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-14 Score=147.59 Aligned_cols=249 Identities=16% Similarity=0.107 Sum_probs=169.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCC---CC----------CCchHHHHHHHcCCCCCCeeEeeCccChH
Q 015758 113 KESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTP---ED----------LFGGATQIPKALGCKNNPLAYDITAACSG 179 (401)
Q Consensus 113 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~---~~----------~~~~a~~i~~~lGl~~~~~~~~i~~~C~~ 179 (401)
+.++.+|+.+|+++||+++|+++++||.+|.+.... .+ ....+..++..||++ ..+.+.+..+|+|
T Consensus 39 ~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~-~~~~~~~~~~caS 117 (520)
T 4egv_A 39 GMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGAD-PAHAVLEVIGGQS 117 (520)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCC-CSEEEECCSSTTH
T ss_pred CCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCC-CceEEEecCCCHH
Confidence 468999999999999999999999987766443211 10 012467899999996 5788888999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCC---------CC------------------------------------
Q 015758 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSRFTD---------WT------------------------------------ 214 (401)
Q Consensus 180 ~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~---------~~------------------------------------ 214 (401)
++.++..|++.|++|.++.||++++|.+|.... +.
T Consensus 118 g~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~ 197 (520)
T 4egv_A 118 PQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGL 197 (520)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHHHHHHH
Confidence 999999999999999999999999999873100 00
Q ss_pred ------------------------------------------------------CC---------CccccccceeEEEEE
Q 015758 215 ------------------------------------------------------DR---------GSCILFGDAAGAVLV 231 (401)
Q Consensus 215 ------------------------------------------------------dr---------~~~~lfGDGAaAvll 231 (401)
.+ .++....|||+|+||
T Consensus 198 ~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL 277 (520)
T 4egv_A 198 LENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLM 277 (520)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEE
T ss_pred HHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEE
Confidence 00 012346899999999
Q ss_pred eeccC-CCCC------eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHH
Q 015758 232 QACDS-EDDG------LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVP 304 (401)
Q Consensus 232 ~~~~~-~~~g------l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~ 304 (401)
.+.+. ++.| +..+...... +.. .. .-++-.. .....
T Consensus 278 ~S~e~A~~lGl~p~a~I~~~a~a~~~-----------~~~---~~-------~~~~~~~----------------~~~~~ 320 (520)
T 4egv_A 278 MSVESARKLGVPEEKWVYLRGHADMK-----------EPK---LL-------ERADIGA----------------SPASV 320 (520)
T ss_dssp EEHHHHHHHTCCGGGCEEEEEEEEEE-----------CCC---GG-------GCSCTTC----------------CHHHH
T ss_pred eeHHHHHHcCCCCceEEEEEEEeccC-----------Ccc---cc-------ccccccc----------------ChHHH
Confidence 87542 1112 2111111100 000 00 0000000 02345
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCch---hhhh--cccccCccccChHHHHHHHHHHcCCCCCC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPME---RVIS--NLANYGNTSAASIPLALDEAVRSGKVKPG 379 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e---~~~~--~l~~~Gn~~sasi~~~L~~~l~~g~~~~G 379 (401)
.+++++|+++|++++|||++-+|-..........+.||++.+ +++- -+..+||...++-...+.+++.+-+-..|
T Consensus 321 ~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~ 400 (520)
T 4egv_A 321 TAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPG 400 (520)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999999999999999999888888888999999654 4432 23579999999888888888775444567
Q ss_pred CEEEEEeeehhhhheeeEEEe
Q 015758 380 HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 380 d~ill~~~G~G~s~~a~llr~ 400 (401)
.+.|..+.| |.-|....+.+
T Consensus 401 ~~~L~~~~g-g~~~~~~~~~l 420 (520)
T 4egv_A 401 QFALVGANG-GIASKYSVGIY 420 (520)
T ss_dssp CEEEEEEEE-TTTTEEEEEEE
T ss_pred CceEEeCCC-CeeeeeeEEEE
Confidence 787776555 56665554443
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.1e-16 Score=173.85 Aligned_cols=373 Identities=13% Similarity=0.115 Sum_probs=217.4
Q ss_pred ccccccccCCcccccc-ccccccCcccee--eeeecccCCCccccCccC---CCcccccCCeEEEEEEEEcCCCccChHH
Q 015758 13 PSLRRRVQPSTWKYRS-GFCFSQGTFRRV--LCSSTIAGSEKSVSSSES---RAPRLINRGCKLVGCGSAVPTLQISNDD 86 (401)
Q Consensus 13 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~I~gig~~lP~~~v~~~~ 86 (401)
.++|+|+...+|++++ ...|+++.|.+. +....++....+...+.. +.+.....++.|.. .-+.++
T Consensus 892 ~~~~~~i~~~tGiRl~~~~~fd~~~p~~~~~L~e~~l~~d~~~~~~s~~~a~~~~~~~~d~v~I~~--------i~~~ee 963 (1688)
T 2pff_A 892 AKYETSILEHSGIRLIEPELFNGYNPEKKEMIQEVIVEEDLEPFEASKETAEQFKHQHGDKVDIFE--------IPETGE 963 (1688)
T ss_dssp TTSSSSSSSGGGTTTSSSSCCSSSSSSCCSSSEECCCCCCCSCCCCCCCCTTHHHHHHHHSCTTSC--------CCCCCS
T ss_pred HHHHHHHHHhcCCCCCCCccCCCCCHHHHhHhhHHhcCCCCcccccChhhhhhccccCCCCeEEec--------CCCHHH
Confidence 4689999999999999 889999999864 222222222111111111 11111122232221 011233
Q ss_pred HHhhhC-------------------C-chhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCC-cCC----CC--
Q 015758 87 LAKIVD-------------------T-SDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVN-PED----VD-- 139 (401)
Q Consensus 87 l~~~~~-------------------~-~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~-~~~----Id-- 139 (401)
+++.+. . ++.|..+.+||..|.....| ....|+.+++++||+++|++ |.+ |+
T Consensus 964 fW~~L~~G~~~i~p~~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mD-P~qrLaLeAa~EALedAGI~dP~ei~~~i~~s 1042 (1688)
T 2pff_A 964 YSVKLLKGATLYIPKALRFDRLVAGQIPTGWNAKTYGISDDIISQVD-PITLFVLVSVVEAFIASGITDPYEMYKYVHVS 1042 (1688)
T ss_dssp SSCCCCCCTTCCCCCCCCEECCSSCSCCCCCCCCCSSCCTTTBTTBC-SSTTHHHHHHHHHHTTTTCSSGGGGGGGTCCS
T ss_pred HHHHHHcCCCEEecCCCCCCceEEEEECCCCChhhCCCCHHHHhccC-HHHHHHHHHHHHHHHHcCCCChHHhccccCCc
Confidence 332210 0 12455567788777665444 56789999999999999997 655 22
Q ss_pred --EEEEEecCCCC------------------------CCc-hHHHHHH-HcCCCCCCeeEeeCccChHHHHHHHHHHHHH
Q 015758 140 --LVLMCTSTPED------------------------LFG-GATQIPK-ALGCKNNPLAYDITAACSGFLLGLVSAACHI 191 (401)
Q Consensus 140 --~li~~t~~~~~------------------------~~~-~a~~i~~-~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l 191 (401)
.++++++.+.. ... .+.+++. .||+. .+.+++..+|+|++.||+.|.+.|
T Consensus 1043 ~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~--GPs~TVdtACASSL~AL~lA~~aI 1120 (1688)
T 2pff_A 1043 EVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSS--GPIKTPVGACATSVESVDIGVETI 1120 (1688)
T ss_dssp CSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSSCCCC--CCCCCCCCTTTTTHHHHHHHHHHH
T ss_pred eEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHHcCCc--CCeEEecCCCchHHHHHHHHHHHH
Confidence 34445543321 011 2567887 69993 799999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCC---------------------------CCCC-CCccccccceeEEEEEeeccC---CCCC
Q 015758 192 RGGGFRNVLVIGGDALSRFT---------------------------DWTD-RGSCILFGDAAGAVLVQACDS---EDDG 240 (401)
Q Consensus 192 ~~g~~~~vLvv~~d~~s~~~---------------------------~~~d-r~~~~lfGDGAaAvll~~~~~---~~~g 240 (401)
++|.++.+||+|+|.++... ++.+ ....+++||||+++||++.+. .+..
T Consensus 1121 rsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesle~Al~~G~~ 1200 (1688)
T 2pff_A 1121 LSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVP 1200 (1688)
T ss_dssp HTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECSHHHHSSSCC
T ss_pred HCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceEEEEeCcHHHHHHCCCc
Confidence 99999999999999865321 0001 123578999999999997541 1222
Q ss_pred eeEE----EEeecCCCCCceeeeccCCCcccccCCCCcccccCCCC--CCc--ccEEEchHHHHHHHHHHH---------
Q 015758 241 LISF----DVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQH--YSY--SSIYMNGKEVFRFAVRVV--------- 303 (401)
Q Consensus 241 l~~~----~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~--~~~--~~~~m~g~~v~~~~~~~~--------- 303 (401)
++.. ...+|+.. ..+..|. ...........|. ...|... ..| ..++|.+++++++....+
T Consensus 1201 IyAvI~GsavnsDg~~-~SipAPg-~GiLt~Ar~~~G~-~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~ 1277 (1688)
T 2pff_A 1201 IYGIVAMAATATDKIG-RSVPAPG-KGILTTAREHHSS-VKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEE 1277 (1688)
T ss_dssp CCCEECCCCCCCCCCC-SSSCCCC-SSSSSSSSSCCCC-SSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred eEEEEEEEEEECCCCc-cCCCCCC-CCccchhhhcccc-cCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhh
Confidence 3322 22222210 1111110 0000000000000 0011110 011 123455666766654433
Q ss_pred ------------------------------------------HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----
Q 015758 304 ------------------------------------------PQTIESALEKAGLTMSSIDWLLLHQANQRIIDA----- 336 (401)
Q Consensus 304 ------------------------------------------~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~----- 336 (401)
..+|+++|+++|++++|||++-.|..+.++.|.
T Consensus 1278 ~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~A 1357 (1688)
T 2pff_A 1278 IPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESAT 1357 (1688)
T ss_dssp SCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTT
T ss_pred hcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHH
Confidence 257889999999999999999999999876654
Q ss_pred HHHHcC---CCch-hhh--hcccccCccccChHHHHHHHHHH---cCCCC----------------------------CC
Q 015758 337 VANRLD---VPME-RVI--SNLANYGNTSAASIPLALDEAVR---SGKVK----------------------------PG 379 (401)
Q Consensus 337 i~~~lg---l~~e-~~~--~~l~~~Gn~~sasi~~~L~~~l~---~g~~~----------------------------~G 379 (401)
+.+.++ -... .+. .....+||+-+|+-...|..++. +|.+. .-
T Consensus 1358 L~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~ 1437 (1688)
T 2pff_A 1358 INEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGV 1437 (1688)
T ss_dssp TGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSS
T ss_pred HHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCC
Confidence 334443 2211 122 34567899999988887776654 22111 11
Q ss_pred CEEEEEeeehhhhheeeEEE
Q 015758 380 HTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 380 d~ill~~~G~G~s~~a~llr 399 (401)
...++.+||.|.+-+.++++
T Consensus 1438 r~AlVnSFGFGGtNAhvILe 1457 (1688)
T 2pff_A 1438 RAVSITSFGFGQKGGQAIVV 1457 (1688)
T ss_dssp SCCCCCCCCSTTCCCCCCEE
T ss_pred cEEEEeeECCCCeeEEEEEe
Confidence 33577889999988888775
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.3e-14 Score=160.01 Aligned_cols=370 Identities=17% Similarity=0.129 Sum_probs=216.7
Q ss_pred cccccccCCcccccc-ccccccCccceee-eeec-ccCCCccccCccC---CCcccccCCeEEEEEEEEcCCCccChHHH
Q 015758 14 SLRRRVQPSTWKYRS-GFCFSQGTFRRVL-CSST-IAGSEKSVSSSES---RAPRLINRGCKLVGCGSAVPTLQISNDDL 87 (401)
Q Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~---~~~~~~~~~v~I~gig~~lP~~~v~~~~l 87 (401)
++|+++...+|++++ ...|++++|.++. .... .....++...+.. ..+...+.++.|.. + -+.+++
T Consensus 1067 ~~~~~i~~~tgir~~~~~~fd~~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~----~----~~~~~~ 1138 (1878)
T 2uv9_A 1067 KYEKYILEHSGIRLIEPELFGGYDPNRKQLLQEVVIEQDLEPFEASKEQAEEFKREHGDKVEIFE----I----PETGQY 1138 (1878)
T ss_dssp HHHHHHHHTSEEEECCGGGGTTCCGGGEEEEEEEECCSCCCCEEECHHHHHHHHHHHGGGEEEEE----C----TTTSCE
T ss_pred HHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHhhcccCCCccccChhhhhhccccCCCCeeEee----C----CChHHH
Confidence 578999999999999 8999999998772 2222 2221111111111 11122234555541 1 111333
Q ss_pred HhhhC--------------------CchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCC-cCC----CC---
Q 015758 88 AKIVD--------------------TSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVN-PED----VD--- 139 (401)
Q Consensus 88 ~~~~~--------------------~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~-~~~----Id--- 139 (401)
++.+. .++.|..+++||..+.....| ....|+++++++||+++|++ |.+ |+
T Consensus 1139 w~~L~~G~~~i~p~~~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mD-p~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~ 1217 (1878)
T 2uv9_A 1139 TVRLRKGATLLIPKALQFDRLVAGQIPTGWDARRYGVPEDIIQQVD-PVTLYVLVSVAEALLSSGITDPYEFYKYVHLSE 1217 (1878)
T ss_dssp EEEECTTCEEEEEEEECCSCCEEEECCTTCCHHHHTCCHHHHHHSC-HHHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGG
T ss_pred HHHHHcCCCeeeecCCCCcceEEEEeCCCCCHhhcCCCHHHHHhcC-HHHHHHHHHHHHHHHHCCCCChhhhhcccCccc
Confidence 32211 012455567777766554433 67889999999999999998 766 33
Q ss_pred -EEEEEecCCC-------------------C-C---Cc--hHHHHHHH-cCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 140 -LVLMCTSTPE-------------------D-L---FG--GATQIPKA-LGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 140 -~li~~t~~~~-------------------~-~---~~--~a~~i~~~-lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
.+++++..+. + . +. .+.+|... ||+. .+.+.+.++|++++.+|++|.+.|+
T Consensus 1218 vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~lg~~--GP~~tv~tACASsl~Al~~A~~~I~ 1295 (1878)
T 2uv9_A 1218 VGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSST--GPIKTPVGACATAVESLDVGYDTIM 1295 (1878)
T ss_dssp EEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHTCCCC--CCBCCBCCGGGHHHHHHHHHHHHHT
T ss_pred eEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHhcCCC--CCeEEEcCcchHHHHHHHHHHHHHH
Confidence 5566665432 0 0 11 26788884 9994 6999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCC----------CC-----------C------CC-CCccccccceeEEEEEeeccC---CCC--
Q 015758 193 GGGFRNVLVIGGDALSRF----------TD-----------W------TD-RGSCILFGDAAGAVLVQACDS---EDD-- 239 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~~----------~~-----------~------~d-r~~~~lfGDGAaAvll~~~~~---~~~-- 239 (401)
+|.++.+||.|+|.++.. .. + .+ ....++.|||++++||++.+. .+.
T Consensus 1296 sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I 1375 (1878)
T 2uv9_A 1296 QGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPI 1375 (1878)
T ss_dssp TTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCC
T ss_pred cCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeEEEEEeeHHHHHHCCCce
Confidence 999999999999986521 10 1 11 124578999999999997431 112
Q ss_pred -C-eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCC--CCcc--------------------cEEE-----
Q 015758 240 -G-LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQH--YSYS--------------------SIYM----- 290 (401)
Q Consensus 240 -g-l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~--~~~~--------------------~~~m----- 290 (401)
+ +.++.+.+|+.. ..+..| +........ ... ..+|... ..|. .++.
T Consensus 1376 ~avI~g~a~~~Dg~~-~s~paP-g~G~~t~ar-~~~--~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 1450 (1878)
T 2uv9_A 1376 YGIVAMTSTATDKIG-RSVPAP-GQGVLTTAR-EKS--GNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAI 1450 (1878)
T ss_dssp CEEEEEEEEECCCSC-SCSSCC-CSCGGGGGC-CCC--CSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEEecCCCc-cCCCCC-Ccchhhhhh-hcc--ccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhh
Confidence 2 334555555532 222222 000000000 000 0011100 0000 0000
Q ss_pred -----------c----hHH----HHHHHHHHH-----------------HHHHHHHHHHcCCCcCCcCEEEecccCHHHH
Q 015758 291 -----------N----GKE----VFRFAVRVV-----------------PQTIESALEKAGLTMSSIDWLLLHQANQRII 334 (401)
Q Consensus 291 -----------~----g~~----v~~~~~~~~-----------------~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~ 334 (401)
+ ..+ +-+.+.+.. ..+|+++|+.+|++++|||++-+|..+.++.
T Consensus 1451 ~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~g 1530 (1878)
T 2uv9_A 1451 KSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVAN 1530 (1878)
T ss_dssp TTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHH
T ss_pred hhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCccc
Confidence 0 000 000000010 1689999999999999999999999998877
Q ss_pred HHHH-----HHc---CCCchh-hh--hcccccCccccChHHHHHHHHHH---cCCCC-----------------------
Q 015758 335 DAVA-----NRL---DVPMER-VI--SNLANYGNTSAASIPLALDEAVR---SGKVK----------------------- 377 (401)
Q Consensus 335 ~~i~-----~~l---gl~~e~-~~--~~l~~~Gn~~sasi~~~L~~~l~---~g~~~----------------------- 377 (401)
|.++ +.+ +-.... +. .....+||+-+|+-...|...+. +|.+.
T Consensus 1531 D~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~ 1610 (1878)
T 2uv9_A 1531 DKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSR 1610 (1878)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSS
T ss_pred CHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccccccccc
Confidence 7543 333 322221 22 34457899999988777766654 22110
Q ss_pred -----CCCEEEEEeeehhhhheeeEEE
Q 015758 378 -----PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 378 -----~Gd~ill~~~G~G~s~~a~llr 399 (401)
.-...++.+||.|.+-+.++++
T Consensus 1611 ~~~~~~~r~a~v~SFGFGG~NahvIle 1637 (1878)
T 2uv9_A 1611 SIKTDGIKAFSVTSFGFGQKGAQAIGV 1637 (1878)
T ss_dssp CEECSCCCEEEEEEEETTTEEEEEEEE
T ss_pred cccCCCCCEEEEccCCCCCeeEEEEEe
Confidence 1245788999999999988875
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=8.3e-14 Score=157.97 Aligned_cols=372 Identities=14% Similarity=0.122 Sum_probs=215.3
Q ss_pred cccccccCCcccccc-ccccccCcccee--eeeecccCCCccccCccC---CCcccccCCeEEEEEEEEcCCCccChHHH
Q 015758 14 SLRRRVQPSTWKYRS-GFCFSQGTFRRV--LCSSTIAGSEKSVSSSES---RAPRLINRGCKLVGCGSAVPTLQISNDDL 87 (401)
Q Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~I~gig~~lP~~~v~~~~l 87 (401)
++|+++...+|++++ ...|+++.|.+. +....++....+...+.. ...+..++++.|..+ + +.+++
T Consensus 1092 ~~~~~i~~~tgir~~~~~~fd~~~p~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~I~~~----~----~~~~~ 1163 (1887)
T 2uv8_A 1092 KYETSILEHSGIRLIEPELFNGYNPEKKEMIQEVIVEEDLEPFEASKETAEQFKHQHGDKVDIFEI----P----ETGEY 1163 (1887)
T ss_dssp HHHHHHHHTSSEEECCGGGGTTCCTTSEEEEEEEECSSCCCCEEECHHHHHHHHHHHGGGEEEEEC----T----TTSCE
T ss_pred HHHHHHHHhcCCCCCCcccCCCCCHHHHHHHHHHHhcccccccccCccchhhHhhcCCCceeEeec----C----chHHH
Confidence 568999999999999 899999999764 222222222211111111 011123455666531 1 12333
Q ss_pred HhhhC--------------------CchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCC-CcCC----CC---
Q 015758 88 AKIVD--------------------TSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEV-NPED----VD--- 139 (401)
Q Consensus 88 ~~~~~--------------------~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi-~~~~----Id--- 139 (401)
++.+. .++.|...++||..+..... +....|+++++++||+++|+ +|.+ |+
T Consensus 1164 w~~L~~G~~~i~p~~~~~~~~~aG~i~~~FD~~~fgI~~~ea~~m-Dp~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~ 1242 (1887)
T 2uv8_A 1164 SVKLLKGATLYIPKALRFDRLVAGQIPTGWNAKTYGISDDIISQV-DPITLFVLVSVVEAFIASGITDPYEMYKYVHVSE 1242 (1887)
T ss_dssp EEEECTTCEEEEEEEECCSCCEEECCCTTCCTTTTTCCHHHHHHS-CHHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGG
T ss_pred HHHHHcCCceeecccCCCCccEEEEECCCCChhhcCCCHHHHHhc-CHHHHHHHHHHHHHHHHcCCCChhhhhcccCCce
Confidence 32211 01245556677766655433 36788999999999999999 4766 33
Q ss_pred -EEEEEecCCC----------C--------------CCc-hHHHHHHH-cCCCCCCeeEeeCccChHHHHHHHHHHHHHH
Q 015758 140 -LVLMCTSTPE----------D--------------LFG-GATQIPKA-LGCKNNPLAYDITAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 140 -~li~~t~~~~----------~--------------~~~-~a~~i~~~-lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~ 192 (401)
.+++++..+. . ... .+.+|... ||+. .+.+.+.++|++++.||+.|.+.|+
T Consensus 1243 vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~lgl~--GP~~tv~tACASsl~Al~~A~~~I~ 1320 (1887)
T 2uv8_A 1243 VGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSS--GPIKTPVGACATSVESVDIGVETIL 1320 (1887)
T ss_dssp EEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHTTCCC--SCCCCCCCGGGHHHHHHHHHHHHHH
T ss_pred eEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHHcCCc--cceEEeecccccHHHHHHHHHHHHH
Confidence 4555655332 0 011 26788885 9994 7999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCC----------C-----------------CCCC-CCccccccceeEEEEEeeccC---CCCC-
Q 015758 193 GGGFRNVLVIGGDALSRF----------T-----------------DWTD-RGSCILFGDAAGAVLVQACDS---EDDG- 240 (401)
Q Consensus 193 ~g~~~~vLvv~~d~~s~~----------~-----------------~~~d-r~~~~lfGDGAaAvll~~~~~---~~~g- 240 (401)
+|.++.+||.|+|.++.. + ++.+ ....++.||||+++||++.+. .+..
T Consensus 1321 sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I 1400 (1887)
T 2uv8_A 1321 SGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPI 1400 (1887)
T ss_dssp TTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCC
T ss_pred cCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCcccccceEEEEEccHHHHHHCCCce
Confidence 999999999999986521 1 1111 123578999999999997431 1122
Q ss_pred ---eeEEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCC--CCcccEEEc--hHHHHH----------------
Q 015758 241 ---LISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQH--YSYSSIYMN--GKEVFR---------------- 297 (401)
Q Consensus 241 ---l~~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~--~~~~~~~m~--g~~v~~---------------- 297 (401)
+.++.+.+|+.. ..+..|..+ -+.......|.. .+|... ..|..-+++ -+++-+
T Consensus 1401 ~avI~g~a~~~Dg~~-~s~paPg~G-~lt~ar~~~G~g-t~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~ 1477 (1887)
T 2uv8_A 1401 YGIVAMAATATDKIG-RSVPAPGKG-ILTTAREHHSSV-KYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEI 1477 (1887)
T ss_dssp CEEEEEEEEECCCSC-SCTTCCCSG-GGGGGCCCCSCC-SSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEEeeeEEecCCcc-ccCCCCCcc-cccccccccccc-CCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Confidence 334455555531 111111000 000000000000 011100 000000000 000000
Q ss_pred ------------------HHHH-----------------HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH----
Q 015758 298 ------------------FAVR-----------------VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA---- 338 (401)
Q Consensus 298 ------------------~~~~-----------------~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~---- 338 (401)
.+.+ ....+++++|+.+|++++|||++-+|..+.++.|.++
T Consensus 1478 g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al 1557 (1887)
T 2uv8_A 1478 PSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATI 1557 (1887)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHH
Confidence 0000 0136899999999999999999999999988776533
Q ss_pred -HHc---CCCchh-hh--hcccccCccccChHHHHHHHHHH---cCC-------------C---------------CCCC
Q 015758 339 -NRL---DVPMER-VI--SNLANYGNTSAASIPLALDEAVR---SGK-------------V---------------KPGH 380 (401)
Q Consensus 339 -~~l---gl~~e~-~~--~~l~~~Gn~~sasi~~~L~~~l~---~g~-------------~---------------~~Gd 380 (401)
+.+ +-.... +. .....+||+-+|+-...|..++. +|. + ..-.
T Consensus 1558 ~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r 1637 (1887)
T 2uv8_A 1558 NEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVR 1637 (1887)
T ss_dssp HHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCC
T ss_pred HHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCccccccccccccccccCCCCC
Confidence 333 333221 22 34457899988887777666543 221 0 0124
Q ss_pred EEEEEeeehhhhheeeEEE
Q 015758 381 TIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 381 ~ill~~~G~G~s~~a~llr 399 (401)
..++.+||.|.+-+.++++
T Consensus 1638 ~a~v~SFGFGG~NahvIle 1656 (1887)
T 2uv8_A 1638 AVSITSFGFGQKGGQAIVV 1656 (1887)
T ss_dssp EEEEEEEETTTEEEEEEEE
T ss_pred EEEEccCCCCCccEEEEEe
Confidence 5788999999999888875
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=94.95 E-value=0.035 Score=53.15 Aligned_cols=111 Identities=21% Similarity=0.167 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-c--hHHHHHHHcCCCCCCeeE-------ee-Cc--------cC
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-G--GATQIPKALGCKNNPLAY-------DI-TA--------AC 177 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~--~a~~i~~~lGl~~~~~~~-------~i-~~--------~C 177 (401)
...+.++.++.|+++|++|+|+|+|+.+ |... + ....+.+++|++.+..-. |- ++ ||
T Consensus 206 aPaA~~ti~~~l~d~g~~~~d~D~ivtg----dL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~c 281 (347)
T 3lma_A 206 APAAADTIKQHLEDLGRTPDDYDLILTG----DLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCAC 281 (347)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEE----SCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCC
T ss_pred hHHHHHHHHHHHHHhCCCHHHcCEEecC----ChHHHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCcccc
Confidence 4556667799999999999999999963 3211 1 356788889986432222 21 24 67
Q ss_pred hHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccceeEEEEEeecc
Q 015758 178 SGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACD 235 (401)
Q Consensus 178 ~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAaAvll~~~~ 235 (401)
+..+..=.+-.+ ++.|+.+++|+|+.-..-.-+.+.... .+-| =|=||++|..+
T Consensus 282 sa~v~~~~~~~~-~~~g~~~ril~~~tGalls~~~~~q~~--sip~-iah~v~~e~~~ 335 (347)
T 3lma_A 282 SAVVTFAHIFKE-IEAGRLNRVLVVATGALLSPTIIQQKE--SIPC-IAHGVVFERAE 335 (347)
T ss_dssp HHHHHHHTHHHH-HHTTSCSEEEEEEEEECCCHHHHHTTC--CCCE-EEEEEEEEEC-
T ss_pred HHHHHHHHHHHH-HhcCcccEEEEEecccccCcchhccCC--ccCh-hhEEEEEEeec
Confidence 776666566555 677899999999977653211111111 1221 24478888743
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=93.37 E-value=0.11 Score=49.29 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~ 193 (401)
+...++.+++|+++|++++|||+++...... ..-..+.+.||++.+.....+ +.++++...+|..+ ++.
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~~~~----~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~~ 296 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQANT----RILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---LRQ 296 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCCCH----HHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---HHh
Confidence 5567889999999999999999988632211 134568899999643333233 24566666666543 444
Q ss_pred C---CCCeEEEEE
Q 015758 194 G---GFRNVLVIG 203 (401)
Q Consensus 194 g---~~~~vLvv~ 203 (401)
+ +.+++|+++
T Consensus 297 ~~~~~G~~vll~~ 309 (331)
T 2x3e_A 297 GILRDGGNMVLTG 309 (331)
T ss_dssp TCSCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 4 235677665
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=93.32 E-value=0.17 Score=48.16 Aligned_cols=79 Identities=23% Similarity=0.260 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCC-CeeEee----CccChHHHHHHHHHHHHHH
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNN-PLAYDI----TAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~-~~~~~i----~~~C~~~~~aL~~A~~~l~ 192 (401)
+...++.+++|+++|++++|||+++...... ..-..+.+.||++.+ .....+ +.++++...+|..+ ++
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~~~~----~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~---~~ 303 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQANL----RIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL---VR 303 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECCSCH----HHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---HH
Confidence 4567889999999999999999988643211 123468899999654 222222 24566666666544 34
Q ss_pred cC---CCCeEEEEE
Q 015758 193 GG---GFRNVLVIG 203 (401)
Q Consensus 193 ~g---~~~~vLvv~ 203 (401)
.| +.+++|+++
T Consensus 304 ~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 304 SGAVPGGGPALMIG 317 (339)
T ss_dssp HTSSCTTCEEEEEE
T ss_pred cCCCCCCCEEEEEE
Confidence 34 345777665
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.06 E-value=0.16 Score=48.35 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~ 192 (401)
.+...++.+++|+++|++++|||+++...... ..-..++++||++.+.....+ +.++++...+|..+ ++
T Consensus 233 ~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~----~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~---~~ 305 (333)
T 4dfe_A 233 VNVLEKVAVEALEKANLSAEQIDWLIPHQANI----RIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA---VR 305 (333)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCSCH----HHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---HH
Confidence 35566888999999999999999998543211 245688899999754443444 24555566565543 44
Q ss_pred cC---CCCeEEEEE
Q 015758 193 GG---GFRNVLVIG 203 (401)
Q Consensus 193 ~g---~~~~vLvv~ 203 (401)
.| +.+++|+++
T Consensus 306 ~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 306 DGRIKRGQNVLIEG 319 (333)
T ss_dssp TTCSCTTCEEEEEE
T ss_pred cCCCCCCCEEEEEE
Confidence 44 346777776
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=92.97 E-value=0.16 Score=48.52 Aligned_cols=83 Identities=13% Similarity=0.031 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~ 193 (401)
+...++.+++|+++|++++|||+++...... ..-..++++||++.+.....+ +.++++...+|..+..-=+-
T Consensus 246 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~----~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~ 321 (345)
T 3s21_A 246 KLAQKTFVAAKQVLGWAVEELDQFVIHQVSR----PHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRL 321 (345)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCSEEEECCSCH----HHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCCC
Confidence 4556778899999999999999999633211 135678899999754433333 25666666666655443111
Q ss_pred CCCCeEEEEEe
Q 015758 194 GGFRNVLVIGG 204 (401)
Q Consensus 194 g~~~~vLvv~~ 204 (401)
.+.+++|+++.
T Consensus 322 ~~Gd~vll~~~ 332 (345)
T 3s21_A 322 KKGDRIALLGI 332 (345)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 23467877764
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=92.97 E-value=0.2 Score=47.59 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~ 192 (401)
.+...++.+++|+++|++++|||+++...... ..-..++++||++.+.....+ +.++++-..+|..+ ++
T Consensus 223 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~----~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~---~~ 295 (323)
T 3il3_A 223 VRELSNVVEETLLANNLDKKDLDWLVPHQANL----RIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA---IR 295 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCCEEEECCSCH----HHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH---HH
Confidence 34456788999999999999999998643211 235688999999755444444 24556666666544 34
Q ss_pred cC---CCCeEEEEEe
Q 015758 193 GG---GFRNVLVIGG 204 (401)
Q Consensus 193 ~g---~~~~vLvv~~ 204 (401)
.| +.+++|+++.
T Consensus 296 ~g~~~~Gd~vll~~~ 310 (323)
T 3il3_A 296 DGRIQRGQLLLLEAF 310 (323)
T ss_dssp TTSSCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 44 3467777763
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=92.71 E-value=0.19 Score=47.14 Aligned_cols=79 Identities=14% Similarity=0.335 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~ 193 (401)
+-..++.+++|+++|++++|||+++...... ..-..+.+.||++.+.....+ +..+++...+|..+ ++.
T Consensus 212 ~~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~~ 284 (313)
T 1zow_A 212 RIMGDASTRVVEKANLTSDDIDLFIPHQANI----RIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LKN 284 (313)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCSCH----HHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HHc
Confidence 3566789999999999999999988643211 123457888998543222222 24566666666543 444
Q ss_pred C---CCCeEEEEE
Q 015758 194 G---GFRNVLVIG 203 (401)
Q Consensus 194 g---~~~~vLvv~ 203 (401)
+ +.+++|+++
T Consensus 285 ~~~~~g~~vl~~~ 297 (313)
T 1zow_A 285 GKLKDDDTIVLVG 297 (313)
T ss_dssp TCCCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 4 236666665
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=92.68 E-value=0.17 Score=48.97 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIR 192 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~ 192 (401)
.+...++++++|+++|++++|||+++...... ..-..++++||++.+.....+. .++++-..+|.. +++
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~----~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~---~~~ 337 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFVLHQANR----FMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALET---MRA 337 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCCCH----HHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHH---HHH
Confidence 44556788999999999999999998532211 1357889999997544444442 345555555543 344
Q ss_pred cCC---CCeEEEEEe
Q 015758 193 GGG---FRNVLVIGG 204 (401)
Q Consensus 193 ~g~---~~~vLvv~~ 204 (401)
.|. .+++|+++.
T Consensus 338 ~g~~~~Gd~vll~~f 352 (365)
T 3gwa_A 338 NGTLARGMRLMLLGF 352 (365)
T ss_dssp TTCCCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 443 467877763
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=92.65 E-value=0.18 Score=48.68 Aligned_cols=81 Identities=20% Similarity=0.191 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~ 192 (401)
.+...++.+++|+++|++++|||+++...... ..-..++++||++.+.....+ +.++++...+|..+..-++
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~----~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l~ 328 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICHQPNL----RILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDIQ 328 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCSCH----HHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhCC
Confidence 44556889999999999999999988533211 235688999999754444444 3567777777766544433
Q ss_pred cCCCCeEEEEE
Q 015758 193 GGGFRNVLVIG 203 (401)
Q Consensus 193 ~g~~~~vLvv~ 203 (401)
. .+++|+++
T Consensus 329 ~--Gd~vll~~ 337 (359)
T 3h78_A 329 P--GQRVLVLT 337 (359)
T ss_dssp T--TCEEEEEE
T ss_pred C--CCEEEEEE
Confidence 3 46777776
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=92.55 E-value=0.23 Score=47.02 Aligned_cols=82 Identities=17% Similarity=0.192 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeE-ee----CccChHHHHHHHHHHHHHH
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAY-DI----TAACSGFLLGLVSAACHIR 192 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~-~i----~~~C~~~~~aL~~A~~~l~ 192 (401)
+...++.+++|+++|++++|||+++...... .....+.+.||++.+...+ .+ +.++++...+|..+..--+
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~~~~----~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~~ 307 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQANS----RINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGA 307 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCSCH----HHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHcCC
Confidence 4566889999999999999999998643211 1345688899996541222 22 2445555555544322111
Q ss_pred cCCCCeEEEEE
Q 015758 193 GGGFRNVLVIG 203 (401)
Q Consensus 193 ~g~~~~vLvv~ 203 (401)
-.+.+++|+++
T Consensus 308 ~~~g~~~l~~~ 318 (335)
T 1u6e_A 308 AKPGDLALLIG 318 (335)
T ss_dssp SCTTCEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 11346777765
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=92.28 E-value=0.25 Score=48.65 Aligned_cols=82 Identities=21% Similarity=0.221 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
.+...++++++|+++|++++|||.+++-... +..-..+.++||++.+-.. + ...|.+|++...+|..+ ++
T Consensus 138 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~--~-~v~~~~Cagg~~AL~~A~~~i~ 214 (413)
T 3v7i_A 138 QAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTML--L-PATQWACVAGTRSLALAADLVA 214 (413)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCTTCEE--E-EESSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCCCceE--E-EeeCCccHHHHHHHHHHHHHHh
Confidence 4556688999999999999999999875432 2344568889999874221 1 22277777777777555 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
.| +++++|+++.
T Consensus 215 ag---~~~~vLvvg~ 226 (413)
T 3v7i_A 215 AD---PDRVVLVVIS 226 (413)
T ss_dssp HC---TTCEEEEEEE
T ss_pred cC---CCCEEEEEEE
Confidence 44 4578887764
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=92.14 E-value=0.25 Score=46.32 Aligned_cols=79 Identities=14% Similarity=0.141 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHcC
Q 015758 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRGG 194 (401)
Q Consensus 119 la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~g 194 (401)
...++.+++|+++|++++|||+++...... ..-..+.+.||++.+.....+ +..+++...+|..+ ++.|
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H~~~~----~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~---~~~~ 291 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPHQANL----RIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---VRDG 291 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCSCH----HHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHTT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---HHhC
Confidence 456889999999999999999988643211 124468899999543222122 24566666666544 3444
Q ss_pred ---CCCeEEEEEe
Q 015758 195 ---GFRNVLVIGG 204 (401)
Q Consensus 195 ---~~~~vLvv~~ 204 (401)
+.+++|+++.
T Consensus 292 ~~~~G~~vll~~~ 304 (317)
T 1hnj_A 292 RIKPGQLVLLEAF 304 (317)
T ss_dssp CSCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEE
Confidence 3467877763
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.05 E-value=0.17 Score=48.68 Aligned_cols=81 Identities=15% Similarity=0.180 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHH--HH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAA--CH 190 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~--~~ 190 (401)
.+...++.+++|+++|++++|||+++...... ..-..++++||++.+.....+ +.++++-..+|..+. ..
T Consensus 243 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~----~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~ 318 (354)
T 4efi_A 243 LNAVPKLVSRTLDIAGRDKDSYDAFLFHQANL----FMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDRL 318 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCCCH----HHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhCC
Confidence 45566788999999999999999998643211 235678999999754443333 356777777776653 34
Q ss_pred HHcCCCCeEEEEE
Q 015758 191 IRGGGFRNVLVIG 203 (401)
Q Consensus 191 l~~g~~~~vLvv~ 203 (401)
++.| +++|+++
T Consensus 319 ~~~G--d~vll~~ 329 (354)
T 4efi_A 319 KEET--LQLGMFG 329 (354)
T ss_dssp HHSC--EEEEEEE
T ss_pred CCCC--CEEEEEE
Confidence 4444 6787777
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=91.86 E-value=0.32 Score=46.46 Aligned_cols=78 Identities=22% Similarity=0.317 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHc
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRS 373 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~ 373 (401)
...++.+++|+++|++++|||.+++.... +..--.+.++||++....+ ++ |.+|++...+|..+ ++.
T Consensus 65 la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a~----di-~~~C~g~~~aL~~A~~~i~~ 139 (350)
T 4ewp_A 65 MAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPAY----DV-SAACAGYCYGVAQADALVRS 139 (350)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCEE----EE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceEE----Ee-ecchhhHHHHHHHhhhhhhC
Confidence 34478899999999999999998864332 3344568889999754322 22 45777777777655 333
Q ss_pred CCCCCCCEEEEEee
Q 015758 374 GKVKPGHTIAAAGF 387 (401)
Q Consensus 374 g~~~~Gd~ill~~~ 387 (401)
+ +.+++|+++.
T Consensus 140 g---~~~~~Lvv~~ 150 (350)
T 4ewp_A 140 G---TARHVLVVGV 150 (350)
T ss_dssp T---SCSEEEEEEE
T ss_pred C---CccceeEeee
Confidence 3 4577888763
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=91.55 E-value=0.28 Score=45.79 Aligned_cols=78 Identities=21% Similarity=0.270 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHcC
Q 015758 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRGG 194 (401)
Q Consensus 119 la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~g 194 (401)
...++.+++|+++|++++|||+++...... .....+.+.||++.+.....+ +..+++.+.+|..+ ++.|
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~~~g 283 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPHQANV----RIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---IKEG 283 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECCSCH----HHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHTT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---HHcC
Confidence 567899999999999999999988643211 123457889998533222222 24566666666544 3444
Q ss_pred ---CCCeEEEEE
Q 015758 195 ---GFRNVLVIG 203 (401)
Q Consensus 195 ---~~~~vLvv~ 203 (401)
+.+++|+++
T Consensus 284 ~~~~G~~~l~~~ 295 (309)
T 2ebd_A 284 KVKRGDLILMTA 295 (309)
T ss_dssp CCCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 246777665
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=90.91 E-value=0.35 Score=45.47 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~ 193 (401)
+-..++.+++|+++|++++|||+++...... ..-..+.+.||++.+.....+ +..+++...+|..+ ++.
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~~---l~~ 292 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPHQANL----RIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEA---VDA 292 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCSCH----HHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 4567889999999999999999988643211 123458888998533222222 24555555555443 444
Q ss_pred CC---CCeEEEEE
Q 015758 194 GG---FRNVLVIG 203 (401)
Q Consensus 194 g~---~~~vLvv~ 203 (401)
|. .+++|+.+
T Consensus 293 g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 293 GRIREGDHVLLVS 305 (322)
T ss_dssp TSSCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 42 35565554
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=90.10 E-value=0.62 Score=45.36 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
+...++++++|+++|++++|||.+++-+.. ..+-..+...+|++......++ |..|++...+|..+...=+
T Consensus 31 ~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v----~~~Css~~~al~~A~~~I~ 106 (395)
T 4e1l_A 31 QLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTV----NKLCGSGLKSVQLAAQSIT 106 (395)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEE----CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEc----cccchHHHHHHHHHHHHHh
Confidence 345588999999999999999998875432 3455678888999753322223 5567777777766544211
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
--..|.+|+.+.
T Consensus 107 ~G~~~~vlv~g~ 118 (395)
T 4e1l_A 107 SGENDVVIAGGT 118 (395)
T ss_dssp TTSCSEEEEEEE
T ss_pred CCCCCEEEEEEE
Confidence 112467777665
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=89.76 E-value=0.7 Score=44.93 Aligned_cols=83 Identities=11% Similarity=0.043 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
..+...++++++|+++|++++|||.+++-... +..-..+.++||++..-.. .. .+ |.+|++...+|..+ +
T Consensus 96 ~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~-~~-~~-~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 96 VPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRR-TM-LH-LNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEE-EE-EE-CCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcce-ee-EE-CchhHHHHHHHHHHHHHH
Confidence 34556688999999999999999999875332 2334568889999864210 11 22 56777777777655 4
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
++| +.+++|+++.
T Consensus 173 ~sg---~~~~vLvvg~ 185 (387)
T 3oit_A 173 ENS---RGARVLVVAA 185 (387)
T ss_dssp HSS---TTCEEEEEEE
T ss_pred hcC---CCCEEEEEEE
Confidence 444 3577877764
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=89.60 E-value=0.72 Score=44.97 Aligned_cols=83 Identities=18% Similarity=0.183 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
..+...++++++|+++|++++|||.+++-... ...-..+.++||++..-.. .-.+ +.+|++...+|..+ +
T Consensus 102 ~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~--~~~v-~~~C~g~~~al~~A~~~i 178 (393)
T 3ov2_A 102 IPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNR--LMIY-SQACHMGAAMLRIAKDLA 178 (393)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEE--EEEE-SCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcce--eeEE-cCccHHHHHHHHHHHHHH
Confidence 34566688999999999999999998874332 2344568889999864310 1122 56777777777655 4
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
++| +.+++|+++.
T Consensus 179 ~sg---~~~~vLvvg~ 191 (393)
T 3ov2_A 179 ENN---RGARVLVVAC 191 (393)
T ss_dssp HHS---TTCEEEEEEE
T ss_pred HcC---CCCEEEEEEE
Confidence 454 3567777754
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=89.53 E-value=0.63 Score=45.34 Aligned_cols=80 Identities=21% Similarity=0.219 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH---
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR--- 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~--- 372 (401)
+...++++++|+++|++++|||.++.-+.. ..+-..+...+|++......++ |..|++...+|..+..
T Consensus 33 ~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v----~~aCss~~~al~~A~~~I~ 108 (396)
T 4dd5_A 33 ELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTI----NIVCGSGLRSVSMASQLIA 108 (396)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEE----CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEe----ccccHHHHHHHHHHHHHHh
Confidence 345588999999999999999999875432 3455678888999753322233 4566677777765544
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
.| ..|.+|+.+.
T Consensus 109 ~G---~~~~vLv~g~ 120 (396)
T 4dd5_A 109 LG---DADIMLVGGA 120 (396)
T ss_dssp HT---SCSEEEEEEE
T ss_pred cC---CCCEEEEEEE
Confidence 44 3467777664
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=89.44 E-value=0.39 Score=46.16 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----C-ccChHHHHHHHHHHHH
Q 015758 116 LTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----T-AACSGFLLGLVSAACH 190 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~-~~C~~~~~aL~~A~~~ 190 (401)
..+...++++++|+++|++++|||++|+.+..... . ..++++||++.+....++ . .++++...+|..+.
T Consensus 236 ~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~---~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~~-- 309 (357)
T 3s3l_A 236 YIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-G---HELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLV-- 309 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-S---CCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-H---HHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHHH--
Confidence 34566789999999999999999999963332222 2 247888999754443333 1 35666666665543
Q ss_pred HHcC---CCCeEEEEE
Q 015758 191 IRGG---GFRNVLVIG 203 (401)
Q Consensus 191 l~~g---~~~~vLvv~ 203 (401)
+.| +.+++|+++
T Consensus 310 -~~g~l~~Gd~vll~~ 324 (357)
T 3s3l_A 310 -ENALVQPGDRVLLFG 324 (357)
T ss_dssp -HTTCCCTTCEEEEEC
T ss_pred -HcCCCCCCCEEEEEE
Confidence 333 235666665
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=89.09 E-value=0.71 Score=43.55 Aligned_cols=79 Identities=23% Similarity=0.268 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
+...++++++|+++|++++|||.++..... +..-..+.++||++. .. .+ .+ |.+|++...+|..+ ++
T Consensus 54 ~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~--~~-~~-~v-~~aC~s~~~al~~A~~~i~ 128 (321)
T 3il6_A 54 DLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE--AF-AF-DI-SAACSGFVYALSMAEKLVL 128 (321)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT--CE-EE-EE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC--ce-EE-Ee-CcccHHHHHHHHHHHHHHH
Confidence 445588899999999999999998874432 334567888999975 21 12 23 35666666666555 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
.| ..+++|+++.
T Consensus 129 ~g---~~~~vLvvg~ 140 (321)
T 3il6_A 129 SG---RYQTGLVIGG 140 (321)
T ss_dssp TS---SCCCEEEEEE
T ss_pred CC---CCCEEEEEEE
Confidence 44 3467777654
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=88.89 E-value=0.73 Score=46.00 Aligned_cols=86 Identities=14% Similarity=0.047 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHH---
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAV--- 371 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l--- 371 (401)
..+...++++++|+++|++++|||.+++-... +..-..+.++||++..-. .-+..|.+|++...+|..+.
T Consensus 110 a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~---~~dv~~~~Csgg~~AL~~A~~~i 186 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLE---KVLLHGIGCSGGLAALRTAANLC 186 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCE---EEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCee---EEEecCCcchHHHHHHHHHHHHH
Confidence 34566789999999999999999999875432 334456888999975321 11445667777777775543
Q ss_pred HcCC-CCCCCEEEEEee
Q 015758 372 RSGK-VKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~-~~~Gd~ill~~~ 387 (401)
+... -...+++|+++.
T Consensus 187 ~a~~~~G~~~~vLVvg~ 203 (465)
T 3e1h_A 187 LGHTARGKPARILVLAL 203 (465)
T ss_dssp HHHHHTTCCCEEEEEEE
T ss_pred hcccccCCCCEEEEEEE
Confidence 3200 013467877764
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=87.74 E-value=0.84 Score=44.39 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHH---
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVR--- 372 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~--- 372 (401)
+...++++++|+++|++++|||.+++-+.. ...-..+...+|++......++ |..|++...+|..+..
T Consensus 31 ~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v----~~aCss~~~al~~A~~~I~ 106 (394)
T 3ss6_A 31 ELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTI----QRQCSSGMQAIMSAAMQIQ 106 (394)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEE----ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEe----cCcchHHHHHHHHHHHHHh
Confidence 345588899999999999999998875432 2345677888999754322233 4566677777665543
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
.|. -|.+|+.+.
T Consensus 107 ~G~---~~~vlv~G~ 118 (394)
T 3ss6_A 107 LGV---SEVVVAGGV 118 (394)
T ss_dssp HTS---CSEEEEEEE
T ss_pred CCC---CCEEEEEEE
Confidence 342 367776654
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=87.72 E-value=1.3 Score=43.00 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHc-CCCcCCcCEEEeccc------CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHc
Q 015758 301 RVVPQTIESALEKA-GLTMSSIDWLLLHQA------NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 301 ~~~~~~i~~aL~~a-gl~~~dId~~i~Hq~------~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
+...++++++|+++ |++++|||.+++-+. ...+-..+...+|++...-..++ |..|+|-..+|+.+...
T Consensus 29 ~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v----~~aCss~l~Al~~A~~~ 104 (387)
T 3goa_A 29 DLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTV----NRLCGSSMQALHDAARM 104 (387)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEE----ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEe----cCcchHHHHHHHHHHHH
Confidence 34558899999999 999999999887443 23455667778898743322222 56677777777665442
Q ss_pred CCCCC--CCEEEEEee
Q 015758 374 GKVKP--GHTIAAAGF 387 (401)
Q Consensus 374 g~~~~--Gd~ill~~~ 387 (401)
++. -|.+|+.+.
T Consensus 105 --I~sG~~d~vLv~G~ 118 (387)
T 3goa_A 105 --IMTGDAQVCLVGGV 118 (387)
T ss_dssp --HHTTSCSEEEEEEE
T ss_pred --HhCCCCCEEEEEEE
Confidence 223 367777664
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=87.34 E-value=2 Score=41.23 Aligned_cols=86 Identities=13% Similarity=0.052 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
..+...++++++|+++|++++|||.+++-... ...-..+.++||++..... + .+.+.+|++...+|..+...=
T Consensus 95 ~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~--~-~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 95 VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVER--V-SLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEE--E-EEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCce--E-EecCCcCHHHHHHHHHHHHHH
Confidence 34566688999999999999999998853221 2234577888998753211 1 232356777777776664421
Q ss_pred CCCCCCEEEEEee
Q 015758 375 KVKPGHTIAAAGF 387 (401)
Q Consensus 375 ~~~~Gd~ill~~~ 387 (401)
+-...+++|+.+.
T Consensus 172 ~~g~~~~vLv~g~ 184 (374)
T 2h84_A 172 KASPRNRILVVCT 184 (374)
T ss_dssp TTCTTCEEEEEEE
T ss_pred HcCCCCEEEEEEE
Confidence 1123477777664
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=87.33 E-value=1.2 Score=43.02 Aligned_cols=82 Identities=13% Similarity=0.046 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
.+...++++++|+++|++++|||.++.-... ...-..+.++||++..-.. .. .+ +.+|++...+|..+ ++
T Consensus 99 ~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~-~~-~v-~~aC~s~~~al~~A~~~i~ 175 (387)
T 3a5r_A 99 AELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKR-FM-FY-HLGCYAGGTVLRLAKDIAE 175 (387)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEE-EE-EE-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcce-ee-eE-ccccHHHHHHHHHHHHHHH
Confidence 4566688999999999999999998864322 2345678889999753100 11 22 45677777666554 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
.| ..+++|+++.
T Consensus 176 ~g---~~~~vLvvg~ 187 (387)
T 3a5r_A 176 NN---KGARVLIVCS 187 (387)
T ss_dssp HS---TTCEEEEEEE
T ss_pred hC---CCCEEEEEEE
Confidence 55 3567777664
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=86.28 E-value=1.7 Score=42.57 Aligned_cols=83 Identities=16% Similarity=0.081 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
.+...++++++|+++|++++|||.+++-... ...-..+.++||++..-.. .. .+ +.+|++...+|..+ ++
T Consensus 126 ~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~-~~-~v-~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 126 PRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKR-VG-VF-QHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEE-EE-EE-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccch-hc-ee-cCccHHHHHHHHHHHHHHH
Confidence 4556688899999999999999998853321 2234578889999753100 11 22 55777777777655 44
Q ss_pred cCCCCCCCEEEEEeee
Q 015758 373 SGKVKPGHTIAAAGFG 388 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~G 388 (401)
.| ..+++|+++.=
T Consensus 203 ~G---~~~~vLvvg~E 215 (413)
T 1xes_A 203 NN---RGARVLVICSE 215 (413)
T ss_dssp TS---TTCCEEEEEEE
T ss_pred cC---CCCEEEEEEeh
Confidence 44 34677776643
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=85.72 E-value=1.5 Score=42.25 Aligned_cols=82 Identities=17% Similarity=0.185 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHH---H
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAV---R 372 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l---~ 372 (401)
.+...++++++|+++|++++|||.++.-... ...-..+.++||++.+... + .+.+.+|++...+|..+. +
T Consensus 85 ~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~--~-~v~~~aCss~~~Al~~A~~~i~ 161 (382)
T 1u0m_A 85 KSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQ--I-PIAQLGCAAGGAAINRAHDFCT 161 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEE--E-EECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcce--E-EccCCcCHHHHHHHHHHHHHHH
Confidence 3456688899999999999999998864322 2234578889998753211 1 234667888777777664 4
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
.| ..+++|+.+.
T Consensus 162 ~g---~~~~vLv~g~ 173 (382)
T 1u0m_A 162 AY---PEANALIVAC 173 (382)
T ss_dssp HS---TTCEEEEEEE
T ss_pred cC---CCCEEEEEEE
Confidence 44 2477777765
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=85.66 E-value=0.74 Score=44.85 Aligned_cols=82 Identities=9% Similarity=0.095 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHc-CC--CCCCeeEee----CccChHHHHHHHHHH
Q 015758 116 LTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKAL-GC--KNNPLAYDI----TAACSGFLLGLVSAA 188 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~l-Gl--~~~~~~~~i----~~~C~~~~~aL~~A~ 188 (401)
......++++++|+++|++++|||+++...... ..-..++++| |+ +.+.....+ ++++++-..+|..+.
T Consensus 289 a~~~~~~~i~~~L~~~gl~~~dId~~v~Hqan~----~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~~ 364 (392)
T 3led_A 289 VVPLVSEMIIEHAREIGIDPHGLKRMWLHQANI----NMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKHQ 364 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECSSCH----HHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEcCCCH----HHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHHh
Confidence 345666789999999999999999988522111 1345677775 75 322322233 256666666665542
Q ss_pred HHHHcCCCCeEEEEE
Q 015758 189 CHIRGGGFRNVLVIG 203 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~ 203 (401)
..++ +.+++|+++
T Consensus 365 ~~~~--~Gd~vll~g 377 (392)
T 3led_A 365 DDMA--QGDLGLICS 377 (392)
T ss_dssp TTCC--TTCEEEEEE
T ss_pred CCCC--CCCEEEEEE
Confidence 2222 235666665
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=85.54 E-value=1.2 Score=48.39 Aligned_cols=74 Identities=8% Similarity=-0.003 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEe---e----CccChHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYD---I----TAACSGFLLGLVSAAC 189 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~---i----~~~C~~~~~aL~~A~~ 189 (401)
.+...++.+++|+++|++++|||+++..... ...-..++++||++.+..... + ++++++...+|..+..
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~----~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~ 938 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGG----PAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRK 938 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSC----HHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCC----hHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHh
Confidence 3446678999999999999999998753211 123567889999975543332 2 3678888888887776
Q ss_pred HHHcC
Q 015758 190 HIRGG 194 (401)
Q Consensus 190 ~l~~g 194 (401)
-++.|
T Consensus 939 ~~~~G 943 (979)
T 3tsy_A 939 KSLKG 943 (979)
T ss_dssp HHHHT
T ss_pred hhccc
Confidence 66655
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=84.99 E-value=1.1 Score=44.19 Aligned_cols=78 Identities=17% Similarity=0.090 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEE-EecCCCCCCchHHHHHHHcCCCCCCeeEe-----eC-ccChHHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLM-CTSTPEDLFGGATQIPKALGCKNNPLAYD-----IT-AACSGFLLGLVSAAC 189 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~~~~~~~~~a~~i~~~lGl~~~~~~~~-----i~-~~C~~~~~aL~~A~~ 189 (401)
..-..++++++|+++|++|+|||+|.. +|.|+.....-...+.+.+|.+.....+. +. ...++++..+..+..
T Consensus 291 ~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~ 370 (427)
T 3ho9_A 291 GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSIL 370 (427)
T ss_dssp CHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHH
Confidence 345678999999999999999999974 45554311112455667777532222221 22 345667777777777
Q ss_pred HHHcC
Q 015758 190 HIRGG 194 (401)
Q Consensus 190 ~l~~g 194 (401)
.|+.+
T Consensus 371 ~l~~~ 375 (427)
T 3ho9_A 371 ALRDQ 375 (427)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 77765
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=83.68 E-value=3.7 Score=39.99 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHH-cCCCcCCcCEEEecccCH------HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHc
Q 015758 301 RVVPQTIESALEK-AGLTMSSIDWLLLHQANQ------RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRS 373 (401)
Q Consensus 301 ~~~~~~i~~aL~~-agl~~~dId~~i~Hq~~~------~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~ 373 (401)
+...++++++|++ +|++++|||.+++-+... .+-..+...+|+|......++...+..+...+-.+ ..+++.
T Consensus 34 ~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A-~~~I~s 112 (407)
T 3svk_A 34 NLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTA-AQKVRS 112 (407)
T ss_dssp HHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEecCcChhHHHHHHHH-HHHHHc
Confidence 3445888999999 999999999988865432 24457788999976543345544444444444333 345666
Q ss_pred CCCCCCCEEEEEee
Q 015758 374 GKVKPGHTIAAAGF 387 (401)
Q Consensus 374 g~~~~Gd~ill~~~ 387 (401)
|. -|.+|+.+.
T Consensus 113 G~---~d~vLv~G~ 123 (407)
T 3svk_A 113 GW---DDLVLAGGV 123 (407)
T ss_dssp TS---CCEEEEEEE
T ss_pred CC---CCEEEEEEE
Confidence 64 367776654
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=82.75 E-value=2.8 Score=40.73 Aligned_cols=82 Identities=15% Similarity=0.214 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeccc------CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQA------NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~------~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
+...++++++|+++|++++|||.+++-.. ....-..+...+|++......++ |+.|++-..+|..+.+.
T Consensus 28 ~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v----~~aCas~~~Al~~A~~~- 102 (401)
T 1ulq_A 28 DLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTV----NRLCGSGLEAVAQAARA- 102 (401)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEE----ECGGGHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeec----cccchHHHHHHHHHHHH-
Confidence 34457888999999999999998887433 23455678888999643322223 45666777777665442
Q ss_pred CCCC--CCEEEEEeee
Q 015758 375 KVKP--GHTIAAAGFG 388 (401)
Q Consensus 375 ~~~~--Gd~ill~~~G 388 (401)
++. -|.+|+.+.-
T Consensus 103 -I~~G~~d~vLv~G~e 117 (401)
T 1ulq_A 103 -IWAGEGKVYIGSGVE 117 (401)
T ss_dssp -HHTTSCSEEEEEEEE
T ss_pred -HHCCCCCEEEEEEEe
Confidence 222 3667666543
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=82.47 E-value=1.3 Score=42.92 Aligned_cols=82 Identities=17% Similarity=0.104 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeccc----CHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HH
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQA----NQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VR 372 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~----~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~ 372 (401)
.+...++++++|+++|++++|||.+++-.. ....-..+.++||++..-....+ .+.+|++...+|..+ ++
T Consensus 114 ~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v---~~~aCas~~~Al~~A~~~i~ 190 (393)
T 1ted_A 114 VPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVV---NFMGCAAAMNALGTATNYVR 190 (393)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE---ESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEe---ccchhHHHHHHHHHHHHHHH
Confidence 355668889999999999999999885322 12234578888998753211111 266777777777655 44
Q ss_pred cCCCCCCCEEEEEee
Q 015758 373 SGKVKPGHTIAAAGF 387 (401)
Q Consensus 373 ~g~~~~Gd~ill~~~ 387 (401)
.|. .+++|+.+.
T Consensus 191 ~G~---~~~vLv~g~ 202 (393)
T 1ted_A 191 AHP---AMKALVVCI 202 (393)
T ss_dssp HST---TCEEEEEEE
T ss_pred cCC---CCEEEEEEE
Confidence 443 477777664
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.19 E-value=4.6 Score=39.45 Aligned_cols=83 Identities=12% Similarity=0.074 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
+...++++++|+++|++++|||.+++-... ...-..+...+|++......++ |+.|++-..+|..+.+.=+
T Consensus 57 ~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v----~~aCss~~~Al~~A~~~I~ 132 (418)
T 2iik_A 57 ELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTV----NRQCSSGLQAVASIAGGIR 132 (418)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEE----ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCceEEEe----CCCCHHHHHHHHHHHHHHH
Confidence 345588889999999999999988875432 2334455677898532221222 5567777777776644211
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
--.-|.+|+.+.
T Consensus 133 ~G~~d~vLv~G~ 144 (418)
T 2iik_A 133 NGSYDIGMACGV 144 (418)
T ss_dssp TTSCSEEEEEEE
T ss_pred CCCCCEEEEecc
Confidence 112467777664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 401 | ||||
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 1e-62 | |
| d1mzja1 | 181 | c.95.1.2 (A:3-183) Priming beta-ketosynthase from | 6e-40 | |
| d1hnja1 | 174 | c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH | 1e-39 | |
| d1mzja2 | 153 | c.95.1.2 (A:184-336) Priming beta-ketosynthase fro | 4e-37 | |
| d1u6ea1 | 184 | c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (Fa | 8e-37 | |
| d1ub7a2 | 149 | c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa | 1e-36 | |
| d1ub7a1 | 172 | c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH | 3e-34 | |
| d1u6ea2 | 148 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 1e-33 | |
| d1xpma1 | 166 | c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA | 3e-31 | |
| d1hnja2 | 143 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 2e-30 | |
| d1u0ma2 | 148 | c.95.1.2 (A:202-349) Putative polyketide synthase | 4e-30 | |
| d1bi5a2 | 154 | c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M | 6e-30 | |
| d1u0ma1 | 200 | c.95.1.2 (A:2-201) Putative polyketide synthase SC | 3e-29 | |
| d1ee0a2 | 160 | c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon | 1e-28 | |
| d1u0ua2 | 156 | c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S | 2e-27 | |
| d1bi5a1 | 235 | c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med | 2e-25 | |
| d1xpma2 | 221 | c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl Co | 2e-07 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 203 bits (518), Expect = 1e-62
Identities = 71/383 (18%), Positives = 119/383 (31%), Gaps = 57/383 (14%)
Query: 59 RAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEW---------ISVRTGIRNR-- 107
P + G + P ++ D A V + ++ I R
Sbjct: 3 LPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRM 62
Query: 108 ---------------------RVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTS 146
R+ E LAV+ + RAL ++ L+++ TS
Sbjct: 63 AVDPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATS 122
Query: 147 TPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVLVIGGD 205
T G I K LG + + C+ + L +A ++R LV+ +
Sbjct: 123 TGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIE 182
Query: 206 ALSRF----TDWTDRGSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIK 261
S D D LFGD A+++ A + L V + L+
Sbjct: 183 LCSVNAVFADDINDVVIHSLFGDGCAALVIGA-SQVQEKLEPGKVVVRSSFSQLLD---- 237
Query: 262 GNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSI 321
+G VL + + + V + L GL +S I
Sbjct: 238 -------NTEDGIVLGVNHNGI----TCELSENLPGYIFSGVAPVVTEMLWDNGLQISDI 286
Query: 322 DWLLLHQANQRIIDAVANRLDVPMERV---ISNLANYGNTSAASIPLALDEAVRSGKVKP 378
D +H +II+ L + E LA +GN + S+ L+ V+ +
Sbjct: 287 DLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAK 346
Query: 379 GH-TIAAAGFGAGLTWGSAILRW 400
T A FG G+T +
Sbjct: 347 AISTGVAFAFGPGVTVEGMLFDI 369
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 138 bits (348), Expect = 6e-40
Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 2/179 (1%)
Query: 59 RAPRLINRGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTG 118
R P R +++G GS P ++SN ++ +D+++EWI RTGIR+RR+ E++
Sbjct: 3 RVPE--RRFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDETIQV 60
Query: 119 LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACS 178
+ V A+ RAL+ A V+P ++DLV++ T T + +N +D++AAC+
Sbjct: 61 MGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAGGFDLSAACA 120
Query: 179 GFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
GF L AA + GG R+VLV+ + ++ D DR LFGD AGA +V D
Sbjct: 121 GFCHALSIAADAVESGGSRHVLVVATERMTDVIDLADRSLSFLFGDGAGAAVVGPSDVP 179
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 137 bits (346), Expect = 1e-39
Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Query: 68 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRA 127
K++G GS +P +N DL K+VDTSDEWI RTGIR R + + E+++ + EAA+RA
Sbjct: 3 TKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRA 62
Query: 128 LQMAEVNPEDVDLVLMCTSTPEDLFGGA-TQIPKALGCKNNPLAYDITAACSGFLLGLVS 186
++MA + + + L+++ T++ F A QI LG K P A+D+ AAC+GF L
Sbjct: 63 IEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP-AFDVAAACAGFTYALSV 121
Query: 187 AACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
A +++ G + LV+G D L+R D TDRG+ I+FGD AGA ++ A +
Sbjct: 122 ADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEP 172
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 130 bits (327), Expect = 4e-37
Identities = 57/159 (35%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVV 303
DG G L+ + + + M+GK VFR+AV V
Sbjct: 3 VVRGIDGTGLGSLHM--------SSSWDQYVEDPSVGRPA----LVMDGKRVFRWAVADV 50
Query: 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS-NLANYGNTSAAS 362
ALE AGLT+ + + HQAN RIID + +RL VP V+S + + GNTS+AS
Sbjct: 51 VPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSAS 110
Query: 363 IPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
+ LALD VRSG V G GFGAGL++ L
Sbjct: 111 VALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLLP 149
|
| >d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 130 bits (327), Expect = 8e-37
Identities = 63/172 (36%), Positives = 94/172 (54%)
Query: 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAAS 125
R L+ G+ P ++ND++ + +D+SDEWI RTGI+ RR + ES +A EA
Sbjct: 11 RSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACR 70
Query: 126 RALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLV 185
RAL A ++ D+D V++ T+T A + A L +D++A +GF L
Sbjct: 71 RALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGAAGFGYALG 130
Query: 186 SAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
+AA IRGGG +LV+G + LS D DRG+C +F D A AV+V +
Sbjct: 131 AAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGETPFQ 182
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Score = 128 bits (322), Expect = 1e-36
Identities = 71/159 (44%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Query: 243 SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRV 302
SF + +DG G + L + P + +YMNG+EVF+FAVRV
Sbjct: 2 SFVLGADGTGAKELYH--------ACVAP-----RLPDGTSMKNRLYMNGREVFKFAVRV 48
Query: 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAAS 362
+ A+EKAGLT I + HQAN RIIDA RL +P ERV N+ YGNTS AS
Sbjct: 49 MNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNVDRYGNTSTAS 108
Query: 363 IPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401
IPLAL EAV +G+++ G + FGAGLTW +A+L WG
Sbjct: 109 IPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTWG 147
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Score = 123 bits (308), Expect = 3e-34
Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRAL 128
++ G+ VP ++N D +DTSDEWI RTGI+ RRV + E + LA +A L
Sbjct: 2 GILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEYTSDLAFKAVEDLL 61
Query: 129 QMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188
+ E VD V++ T+TP+ LF + +A AYD+ A C G++ L A
Sbjct: 62 RRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKAF-AYDLLAGCPGWIYALAQAH 120
Query: 189 CHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQACDSE 237
+ G + VL +G +ALS+ DW DR + +LFGD GA +V
Sbjct: 121 ALVEAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVREG 169
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 120 bits (302), Expect = 1e-33
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 247 HSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQT 306
SDGE + D + P+ + + + G VFR+A +
Sbjct: 6 GSDGEQADAI--------RQDIDWITFAQNPSGPRPF----VRLEGPAVFRWAAFKMGDV 53
Query: 307 IESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMER-VISNLANYGNTSAASIPL 365
A++ AG+ ID + HQAN RI + + L + + V +++ + GNTSAASIPL
Sbjct: 54 GRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPL 113
Query: 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 399
A+ E + +G KPG G+GAGL++ + ++R
Sbjct: 114 AMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVR 147
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Score = 114 bits (287), Expect = 3e-31
Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 6/164 (3%)
Query: 71 VGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQM 130
VP + LA+ + G V + + + AA +
Sbjct: 5 DKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAA--KDII 62
Query: 131 AEVNPEDVDLVLMCTSTPEDLFGG-ATQIPKALGCKNNPLAYDITAACSGFLLGLVSAAC 189
+ + + + +V++ T + D A QI LG + +++ AC + A
Sbjct: 63 TDEDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 122
Query: 190 HIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAGAVLVQA 233
++ VLVI D + G A A+++
Sbjct: 123 YLATRPNEKVLVIATDTARYGLNSGGE---PTQGAGAVAMVIAH 163
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 112 bits (280), Expect = 2e-30
Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 16/159 (10%)
Query: 242 ISFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVR 301
IS +H+DG G L L + V H + M G EVF+ AV
Sbjct: 1 ISTHLHADGSYGELLT-----------LPNADRVNPENSIH-----LTMAGNEVFKVAVT 44
Query: 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAA 361
+ ++ L L S +DWL+ HQAN RII A A +L + M+ V+ L +GNTSAA
Sbjct: 45 ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAA 104
Query: 362 SIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
S+P ALDEAVR G++KPG + FG G TWGSA++R+
Sbjct: 105 SVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 143
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 111 bits (278), Expect = 4e-30
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 288 IYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMER 347
+ + + + ++ + G S +D+ ++H RI+D ++ L+V
Sbjct: 30 FHFLLDKRVPATMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHA 89
Query: 348 V---ISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400
+ L YGN ++A + AL G V+ G AGFG G+T ++ W
Sbjct: 90 FRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCW 145
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 110 bits (277), Expect = 6e-30
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Query: 288 IYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMER 347
+ K+V + + + + A E G++ + + + H I+D V +L + E+
Sbjct: 29 TFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEK 88
Query: 348 VISN---LANYGNTSAASIPLALDEAVRSGKVKPGHT-------IAAAGFGAGLTWGSAI 397
+ + L+ YGN S+A + LDE + T GFG GLT + +
Sbjct: 89 MNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVV 148
Query: 398 LR 399
LR
Sbjct: 149 LR 150
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 110 bits (276), Expect = 3e-29
Identities = 33/197 (16%), Positives = 60/197 (30%), Gaps = 32/197 (16%)
Query: 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEW---------ISVRTGIRNRRVLSGKESLTG- 118
L +VP I+ ++ ++ + TG+R R ++ E
Sbjct: 2 TLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRTRHIVQPIEDTLEH 61
Query: 119 ----------------LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKAL 162
RAL AE+ D+D+++ + T + + +
Sbjct: 62 PGFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEM 121
Query: 163 GCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRG---- 217
G + I C+ + A N L++ + S TD G
Sbjct: 122 GFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQPTDLGVGSL 181
Query: 218 -SCILFGDAAGAVLVQA 233
LFGD A +V+
Sbjct: 182 LCNGLFGDGIAAAVVRG 198
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Score = 107 bits (269), Expect = 1e-28
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 288 IYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMER 347
+ ++V + + E AL G+T + + ++H + I+D V +L++ ++
Sbjct: 34 TFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDK 93
Query: 348 VI---SNLANYGNTSAASIPLALDEAVRSGKVKPGHT-------IAAAGFGAGLTWGSAI 397
+ L+ YGN +A + +DE + + T GFG G+T + +
Sbjct: 94 LRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVV 153
Query: 398 LR 399
LR
Sbjct: 154 LR 155
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Score = 104 bits (260), Expect = 2e-27
Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Query: 288 IYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMER 347
+ V + + A + ++ + + ++H + I+D V +L++ +
Sbjct: 30 TFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTK 89
Query: 348 VISN---LANYGNTSAASIPLALDEAVRSGKV-------KPGHTIAAAGFGAGLTWGSAI 397
+I ++ YGN S+A + LD+ ++ + GFG GLT + +
Sbjct: 90 LIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVV 149
Query: 398 LRW 400
L+
Sbjct: 150 LKS 152
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 101 bits (251), Expect = 2e-25
Identities = 33/209 (15%), Positives = 63/209 (30%), Gaps = 44/209 (21%)
Query: 69 KLVGCGSAVPTLQISNDDLA------------KIVDTSDEWISVRTGIRNRRVLSGKESL 116
++ G+A P + + + + ++ I+ R + +E L
Sbjct: 18 TILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEIL 77
Query: 117 TG-------------------------LAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL 151
L EAA +A++ + +++CT++ D+
Sbjct: 78 KENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM 137
Query: 152 FGGATQIPKALGCKNN-PLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF 210
G Q+ K LG + C L A VLV+ + +
Sbjct: 138 PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVT 197
Query: 211 TDWTDRGSC------ILFGDAAGAVLVQA 233
LFGD A A++V +
Sbjct: 198 FRGPSDTHLDSLVGQALFGDGAAALIVGS 226
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Score = 49.2 bits (117), Expect = 2e-07
Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 31/146 (21%)
Query: 275 VLAFPPQHYSYSS-IY------------MNGK---EVFRFAVRVVPQTIESALEKAGLTM 318
+LA +Y+ +Y ++G + + + + Q+ ++ G ++
Sbjct: 1 ILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQ---QSWNEYAKRQGKSL 57
Query: 319 SSIDWLLLHQANQRII------------DAVANRLDVPMERVISNLANYGNTSAASIPLA 366
+ L H ++ + RL E + GN S+ L+
Sbjct: 58 ADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLS 117
Query: 367 LDEAVRSGKVKPGHTIAAAGFGAGLT 392
L + + ++ G TI +G+G
Sbjct: 118 LISLLENRDLQAGETIGLFSYGSGSV 143
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 401 | |||
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 100.0 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 100.0 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 100.0 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 100.0 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 100.0 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.98 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.97 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.97 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.97 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 99.97 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.96 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 99.91 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 99.88 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.88 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 99.88 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.38 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.36 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.27 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.27 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.26 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.24 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.12 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.02 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.99 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.92 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.89 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.89 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.78 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.38 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.32 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.3 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.23 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 97.97 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 97.65 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 97.59 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 97.43 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 97.41 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 97.39 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 96.68 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.59 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.38 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 96.05 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 95.98 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 95.4 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 94.55 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 92.45 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 92.19 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 90.21 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 88.34 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 88.26 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 87.63 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 86.53 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 86.4 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 81.35 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 81.22 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.3e-54 Score=424.19 Aligned_cols=317 Identities=22% Similarity=0.263 Sum_probs=255.0
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCCc------h---hhhhhhcCcceeEecCCC-----------------------CC
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDTS------D---EWISVRTGIRNRRVLSGK-----------------------ES 115 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~~------~---~~i~~~~Gi~~R~~~~~~-----------------------e~ 115 (401)
.+|.|+|+|+|+++|+|+|+.+++... . ++|.+++||++||++.++ |+
T Consensus 12 a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~~~e~ 91 (372)
T d1teda_ 12 AVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFYEH 91 (372)
T ss_dssp EEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHHHHhH
Confidence 589999999999999999999876321 1 347788999999997542 35
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHHcC
Q 015758 116 LTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGG 194 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~~g 194 (401)
..+|+++|+++||+++|++|+|||+||++|+++...++.+.+|+++||+++++..+++. +||+|++.||++|..+|++|
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg 171 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAH 171 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHhcC
Confidence 67999999999999999999999999999988655556899999999997667778885 69999999999999999999
Q ss_pred CCCeEEEEEeccCCCCCCCCCC----CccccccceeEEEEEeeccCCCCCeeEEEEeecCCCCCceeeeccCCCcccccC
Q 015758 195 GFRNVLVIGGDALSRFTDWTDR----GSCILFGDAAGAVLVQACDSEDDGLISFDVHSDGEGGRHLNACIKGNQTNDALG 270 (401)
Q Consensus 195 ~~~~vLvv~~d~~s~~~~~~dr----~~~~lfGDGAaAvll~~~~~~~~gl~~~~~~s~g~~~~~l~~~~~~~~~~~~~~ 270 (401)
+.+++|||++|.++..+++.++ .+.++|||||+|+||++++... ++.......++... +. ..+..
T Consensus 172 ~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~-~~~~~~~~~~~~~~-~~---~~~~~------ 240 (372)
T d1teda_ 172 PAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQE-KLEPGKVVVRSSFS-QL---LDNTE------ 240 (372)
T ss_dssp TTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTS-CCCTTCEEEEEEEE-EE---CTTCT------
T ss_pred CCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCccc-ccCCceeEEecccc-cc---cCCCc------
Confidence 9999999999999977665543 2446899999999999866321 11100000111000 00 00000
Q ss_pred CCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhh-
Q 015758 271 SNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVI- 349 (401)
Q Consensus 271 ~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~- 349 (401)
.+.....+. .....|+++++++++.+.++++++++|+++|++++|||+|++||+|.++++.+.++||++++++.
T Consensus 241 -~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~ 315 (372)
T d1teda_ 241 -DGIVLGVNH----NGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQ 315 (372)
T ss_dssp -TSEEEEEET----TEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHH
T ss_pred -cccccCCCC----CcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHHHHHHHHHcCCCHHHhhh
Confidence 000000111 12355788999999999999999999999999999999999999999999999999999999985
Q ss_pred --hcccccCccccChHHHHHHHHHHcCCCCCC-CEEEEEeeehhhhheeeEEEe
Q 015758 350 --SNLANYGNTSAASIPLALDEAVRSGKVKPG-HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 350 --~~l~~~Gn~~sasi~~~L~~~l~~g~~~~G-d~ill~~~G~G~s~~a~llr~ 400 (401)
.++.+||||+++|+|++|+++++++++++| |++++++||+|+||+++|||+
T Consensus 316 s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~ 369 (372)
T d1teda_ 316 SWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDI 369 (372)
T ss_dssp HHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEE
T ss_pred hHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhhee
Confidence 468899999999999999999999988665 899999999999999999997
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.1e-39 Score=281.56 Aligned_cols=169 Identities=41% Similarity=0.690 Sum_probs=162.2
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
|..+|.|+|+|+|+++++|+|+.+.++.+++|+.+++||++||+..++++..+|+.+|+++||+++|++|++||+||++|
T Consensus 1 m~a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s 80 (174)
T d1hnja1 1 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVAT 80 (174)
T ss_dssp CEEEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred CccEEEEEEEECCCCcccHHHHHHHhCCCHHHHHhccCcceeeecCCCccchHHHHHHHHHhhhhcccccccccEEEEec
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
+++++.. +.+.+|+++||++ ++.+||++++|+||+.||++|..++++|.++++|||++|..|++++|.|+.+.++|||
T Consensus 81 ~~~~~~~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S~~~~~~d~~~~~lfGD 159 (174)
T d1hnja1 81 TSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGD 159 (174)
T ss_dssp SCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHSCTTCHHHHTTBCC
T ss_pred CCccccccchhhhhhhccCCC-chhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhhcccCCCCCCeEEEece
Confidence 9999875 6799999999995 7999999999999999999999999999999999999999999999999988889999
Q ss_pred eeEEEEEeecc
Q 015758 225 AAGAVLVQACD 235 (401)
Q Consensus 225 GAaAvll~~~~ 235 (401)
||+|+||++++
T Consensus 160 gA~A~vl~~~~ 170 (174)
T d1hnja1 160 GAGAAVLAASE 170 (174)
T ss_dssp EEEEEEEEEES
T ss_pred eeEEEEEEeCC
Confidence 99999999876
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=100.00 E-value=2.7e-38 Score=279.82 Aligned_cols=169 Identities=37% Similarity=0.620 Sum_probs=161.3
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEe
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCT 145 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 145 (401)
+..+|+|+|+|+|+++++|+|+.+.++.+++||.+++||++||++.++|+..+|+++|++++|+++|++|+|||+||++|
T Consensus 8 ~~arI~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~~tGi~~R~~~~~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s 87 (181)
T d1mzja1 8 RFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVST 87 (181)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHHHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred CccEEEEEEEECCCceecHHHHHHHcCCCHHHHHhccCcceehhhccCCcHHHHhHHHHHhhhhhccCChhHCeEEEEec
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccc
Q 015758 146 STPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGD 224 (401)
Q Consensus 146 ~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGD 224 (401)
++|++.. +.+..||++||. +++.+||++++|+||+.||++|..++++|.++++|||++|.+|++++++|+.+.++|||
T Consensus 88 ~~~~~~~p~~a~~v~~~l~~-~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s~~~~~~d~~~~~lfGD 166 (181)
T d1mzja1 88 MTNFVHTPPLSVAIAHELGA-DNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTDVIDLADRSLSFLFGD 166 (181)
T ss_dssp SCCCCCSSCHHHHHHHHHTC-TTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGGGSCSSCTTTTTTBCE
T ss_pred cCCccccccHHHHHHHhhcC-CCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccccccCCCCCcceEEEeee
Confidence 9998876 579999999998 47999999999999999999999999999999999999999999999999988889999
Q ss_pred eeEEEEEeecc
Q 015758 225 AAGAVLVQACD 235 (401)
Q Consensus 225 GAaAvll~~~~ 235 (401)
||+|+||++++
T Consensus 167 GAaA~ll~~~~ 177 (181)
T d1mzja1 167 GAGAAVVGPSD 177 (181)
T ss_dssp EEEEEEEEEES
T ss_pred eeEEEEEEeCC
Confidence 99999999865
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-37 Score=273.29 Aligned_cols=165 Identities=37% Similarity=0.652 Sum_probs=158.0
Q ss_pred EEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCC
Q 015758 69 KLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTP 148 (401)
Q Consensus 69 ~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~ 148 (401)
+|.|+|+|+|+++++|+|+.+.++.+.+||.+++||++||++.++|+..+|+.+|++++|+++|++|+|||+||++|++|
T Consensus 2 gI~~ig~ylP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~ 81 (172)
T d1ub7a1 2 GILALGAYVPERVMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTP 81 (172)
T ss_dssp EEEEEEEECCSEEEEHHHHHTTSSCCHHHHHHHTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSC
T ss_pred ceeEEEEECCCceEcHHHHHHHhCCCHHHHHhccCceeeeeccccccccHHHHHHHHHHHhhcCcccccceEEEEecccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCccccccceeE
Q 015758 149 EDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAAG 227 (401)
Q Consensus 149 ~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGAa 227 (401)
++.+ +.+.+|+++||. ++.+|||+++|+|++.+|.+|..++++|.++++|||++|.+|++++|+|+.+..+|||||+
T Consensus 82 ~~~~p~~a~~v~~~Lg~--~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~~~~~d~~~~~lfGDgAa 159 (172)
T d1ub7a1 82 DALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGG 159 (172)
T ss_dssp SEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTSCTTCHHHHTTBCCEEE
T ss_pred cccccchHHHHHHHhcc--CccceeehhccccHHHHHHHHhhhhhcCCcceeEEecccccccccCCCCcCeEEEecceeE
Confidence 8765 579999999996 5899999999999999999999999999999999999999999999999988889999999
Q ss_pred EEEEeecc
Q 015758 228 AVLVQACD 235 (401)
Q Consensus 228 Avll~~~~ 235 (401)
|+||++.+
T Consensus 160 A~ll~~~~ 167 (172)
T d1ub7a1 160 AAVVGKVR 167 (172)
T ss_dssp EEEEECCC
T ss_pred EEEEEEcC
Confidence 99999865
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=1.1e-33 Score=246.80 Aligned_cols=163 Identities=17% Similarity=0.164 Sum_probs=152.2
Q ss_pred eEEEEEEEEcCCCccChHHHHhhhCCchhhhhhhcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecC
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIVDTSDEWISVRTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTST 147 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~ 147 (401)
|+|.++|+|+|+++++|+|+++..+.+.+|+.+++||++|+++.++|+..+|+++|++++|++. ++++||+||++|++
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~g~~~~~i~~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~ 79 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVATES 79 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHTTTCCSEEEECCTTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSS
T ss_pred eeEeEEEEECCCeEEcHHHHHHHhCCCHHHHHHhcCcEEEEeCCCccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccc
Confidence 7999999999999999999999999999999999999999999999999999999999999886 57899999999999
Q ss_pred CCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCCcccccccee
Q 015758 148 PEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRFTDWTDRGSCILFGDAA 226 (401)
Q Consensus 148 ~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~~~lfGDGA 226 (401)
+++.. +.+..++++||+++++.+||++++|+||+.||++|..++++|+.+++|||++|..+..+++.++ .+|||||
T Consensus 80 ~~~~~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~~~~~~~---~~fGDGA 156 (166)
T d1xpma1 80 AVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSGGE---PTQGAGA 156 (166)
T ss_dssp CSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCCTTCSSG---GGCEEEE
T ss_pred cccccchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEeccCCCCCC---ccCCCee
Confidence 98876 5799999999998789999999999999999999999999999999999999998877777654 5799999
Q ss_pred EEEEEeecc
Q 015758 227 GAVLVQACD 235 (401)
Q Consensus 227 aAvll~~~~ 235 (401)
+|+||+++|
T Consensus 157 ~A~ll~~~P 165 (166)
T d1xpma1 157 VAMVIAHNP 165 (166)
T ss_dssp EEEEEEESC
T ss_pred EEEEEecCC
Confidence 999999865
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.98 E-value=2.5e-32 Score=233.56 Aligned_cols=146 Identities=49% Similarity=0.802 Sum_probs=131.4
Q ss_pred EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcC
Q 015758 243 SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSID 322 (401)
Q Consensus 243 ~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId 322 (401)
.|.+.+||.+.+.+.++..... .|.......++.|+|+++|+++++.++++|+++|+++|++++|||
T Consensus 2 ~f~l~sDG~~~~~l~~~~gg~~-------------~p~~~~~~~~~~M~G~~vf~~a~~~vp~~i~~~L~~~g~~~~dId 68 (149)
T d1ub7a2 2 SFVLGADGTGAKELYHACVAPR-------------LPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIR 68 (149)
T ss_dssp EEEEEECGGGCTTEEEESSCSB-------------CTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCS
T ss_pred CcEEeeeCCCCceEEECCCCCC-------------CCCCcCcCCcEEEccHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 4678899988888877654322 232222234588999999999999999999999999999999999
Q ss_pred EEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 323 WLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 323 ~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
+|++||+|.++++.++++|++++++++.++++||||++||+|++|+++++++++++||+|++++||+|++|+++++|||
T Consensus 69 ~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~~~~Gd~vll~g~G~G~s~ga~llrw~ 147 (149)
T d1ub7a2 69 LFVPHQANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTWG 147 (149)
T ss_dssp EEEECCSCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred EEEeeccchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCCCCCCCEEEEEEEchHhhhEEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999996
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=5.5e-32 Score=229.76 Aligned_cols=142 Identities=43% Similarity=0.711 Sum_probs=127.4
Q ss_pred EEEEeecCCCCCceeeeccCCCcccccCCCCcccccCCCCCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcC
Q 015758 243 SFDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQHYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSID 322 (401)
Q Consensus 243 ~~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId 322 (401)
+..+++||.+++.+.++.+ |. ..|.. ..+++|+|+++|+++++.++++++++|+++|++++|||
T Consensus 2 st~l~sdG~~~~~l~~p~g-----------~~--~~p~~---~~~~~m~G~~vf~~av~~~~~~i~~~L~~~g~~~~dId 65 (143)
T d1hnja2 2 STHLHADGSYGELLTLPNA-----------DR--VNPEN---SIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLD 65 (143)
T ss_dssp EEEEEECGGGGGGEECCCC-----------CS--SCTTS---CCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred CccEEccCCCCCEEEECCC-----------CC--CCCCC---CceEEEEChHHhhhhhhhhhHHHHHHHHHhhhcccccc
Confidence 4567888887777765432 11 12322 23589999999999999999999999999999999999
Q ss_pred EEEecccCHHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 323 WLLLHQANQRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 323 ~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+|++||+|.++++.++++|+++++|+..++++||||++||+|++|+++++++++++||+|++++||+|++|+++++||
T Consensus 66 ~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~~~~Gd~vll~g~G~G~s~g~~llrw 143 (143)
T d1hnja2 66 WLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 143 (143)
T ss_dssp EEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred eEEeccCchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhCCCCCCCEEEEEEEehhhhhEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.97 E-value=2.9e-32 Score=244.65 Aligned_cols=165 Identities=20% Similarity=0.210 Sum_probs=146.5
Q ss_pred EEEEEEEEcCCCccChHHHHhhhCC----c-----hhhhhhhcCcceeEecCCCC-----------------CHHHHHHH
Q 015758 69 KLVGCGSAVPTLQISNDDLAKIVDT----S-----DEWISVRTGIRNRRVLSGKE-----------------SLTGLAVE 122 (401)
Q Consensus 69 ~I~gig~~lP~~~v~~~~l~~~~~~----~-----~~~i~~~~Gi~~R~~~~~~e-----------------~~~~la~~ 122 (401)
+|.++++|+|+++++|+|+.+++.. . ..+|.+++||++||++.++| ...+|+++
T Consensus 2 ~i~~~a~~~P~~~v~n~e~~e~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~~~~~~a~~la~~ 81 (200)
T d1u0ma1 2 TLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRVPA 81 (200)
T ss_dssp EECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred eeccceEECCCeeEcHHHHHHHHHHhCCCchhHHHHHHHHHhCCCCeeeEECChhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999876421 1 12477889999999987654 57899999
Q ss_pred HHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC-ccChHHHHHHHHHHHHHHcCCCCeEEE
Q 015758 123 AASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT-AACSGFLLGLVSAACHIRGGGFRNVLV 201 (401)
Q Consensus 123 Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~-~~C~~~~~aL~~A~~~l~~g~~~~vLv 201 (401)
|+++||+++|++|+|||+||++|+++++.++.+.+|+++||+++++..+++. +||+|++.+|++|..++++|+.++|||
T Consensus 82 Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLv 161 (200)
T d1u0ma1 82 VIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALI 161 (200)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 9999999999999999999999999887778899999999998889999995 799999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCC-----ccccccceeEEEEEee
Q 015758 202 IGGDALSRFTDWTDRG-----SCILFGDAAGAVLVQA 233 (401)
Q Consensus 202 v~~d~~s~~~~~~dr~-----~~~lfGDGAaAvll~~ 233 (401)
|++|.+|..+++.|+. +..+|||||+|+||++
T Consensus 162 v~~e~~S~~~~~~d~~~~~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 162 VACEFCSLCYQPTDLGVGSLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp EEEEEGGGGCCTTCCSHHHHHHHHHBCEEEEEEEEET
T ss_pred EEEeccccccCCCCCChhhhhcccccccccEEEEEec
Confidence 9999999999887764 3468999999999985
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.97 E-value=1.1e-31 Score=246.56 Aligned_cols=170 Identities=19% Similarity=0.195 Sum_probs=148.6
Q ss_pred CCeEEEEEEEEcCCCccChHHHHhhhC----C--------chhhhhhhcCcceeEecCCC--------------------
Q 015758 66 RGCKLVGCGSAVPTLQISNDDLAKIVD----T--------SDEWISVRTGIRNRRVLSGK-------------------- 113 (401)
Q Consensus 66 ~~v~I~gig~~lP~~~v~~~~l~~~~~----~--------~~~~i~~~~Gi~~R~~~~~~-------------------- 113 (401)
.+.+|+|+|+|+|+++++|+++.+++. . ..+|+.+++||++||+..++
T Consensus 15 ~pa~I~giGt~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (235)
T d1bi5a1 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDAR 94 (235)
T ss_dssp SCCEEEEEEEECCSCEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHTCHHHHSSSCSCHHHH
T ss_pred CCcEEEEEEEECCCcEEeHHHHHHHHHHhhccccchhhhhhhhhhhcccCCceeEEecChHhhccCcccccccCccHHHH
Confidence 357999999999999999999987641 1 13678899999999997653
Q ss_pred -----CCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee-CccChHHHHHHHHH
Q 015758 114 -----ESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI-TAACSGFLLGLVSA 187 (401)
Q Consensus 114 -----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i-~~~C~~~~~aL~~A 187 (401)
++..+|+++|++++|+++|++++|||+||++|++|++.++.+..++++||+..++..+++ +.+|+|++.+|.+|
T Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A 174 (235)
T d1bi5a1 95 QDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLA 174 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHH
Confidence 245789999999999999999999999999999998888888888899888777877765 78999999999999
Q ss_pred HHHHHcCCCCeEEEEEeccCCCCCCCCCCCc------cccccceeEEEEEeecc
Q 015758 188 ACHIRGGGFRNVLVIGGDALSRFTDWTDRGS------CILFGDAAGAVLVQACD 235 (401)
Q Consensus 188 ~~~l~~g~~~~vLvv~~d~~s~~~~~~dr~~------~~lfGDGAaAvll~~~~ 235 (401)
.+++++|+.++||||++|.+|.++++.|+.+ ..+|||||+|+||+.++
T Consensus 175 ~~~i~~~~~~~vLvV~~E~~S~~~~~~d~~~~~~~v~~~lFGDGA~A~vl~~~p 228 (235)
T d1bi5a1 175 KDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP 228 (235)
T ss_dssp HHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSC
T ss_pred HHHHHcCCCCeEEEEEeeecceecCCCCCCchhhhcceeeeccceEEEEEecCC
Confidence 9999999999999999999999998877643 35899999999999765
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.97 E-value=5.3e-31 Score=225.96 Aligned_cols=145 Identities=40% Similarity=0.537 Sum_probs=125.9
Q ss_pred EEEeecCCCCCceeeeccCCCcccccCCCCcccccCCC-CCCcccEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcC
Q 015758 244 FDVHSDGEGGRHLNACIKGNQTNDALGSNGSVLAFPPQ-HYSYSSIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSID 322 (401)
Q Consensus 244 ~~~~s~g~~~~~l~~~~~~~~~~~~~~~~G~~~~~p~~-~~~~~~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId 322 (401)
|.+.+||.+++.+.++.+... .|.. .....+++|||++||+++++.++++++++|+++|++.+|||
T Consensus 3 f~~gsDG~~~~~l~i~~gg~~-------------~~~~~~~~~~~~~m~G~~v~~~av~~vp~~i~~~L~~~gl~~~dId 69 (153)
T d1mzja2 3 VVRGIDGTGLGSLHMSSSWDQ-------------YVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLV 69 (153)
T ss_dssp CEEEECGGGGGGEEESCCHHH-------------HTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCS
T ss_pred eeeeccCCCCCEEEECCCCCC-------------CCCCccCCCceEEEcCHHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 456778877777766533211 1111 11223689999999999999999999999999999999999
Q ss_pred EEEecccCHHHHHHHHHHcCCCchhhhh-cccccCccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 323 WLLLHQANQRIIDAVANRLDVPMERVIS-NLANYGNTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 323 ~~i~Hq~~~~i~~~i~~~lgl~~e~~~~-~l~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
+|++||+|.++++.++++||++++++.. ++++||||+|||+|++|+++++++++++||+|++++||+|+||++++|+|.
T Consensus 70 ~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~~~~~~~~~~Gd~ill~~fG~G~s~~~~~l~~~ 149 (153)
T d1mzja2 70 AFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLLP 149 (153)
T ss_dssp EEEECCSCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhEEEEEec
Confidence 9999999999999999999999999864 789999999999999999999999999999999999999999999999994
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=5.4e-30 Score=218.43 Aligned_cols=114 Identities=35% Similarity=0.591 Sum_probs=110.6
Q ss_pred cEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh-cccccCccccChHHH
Q 015758 287 SIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS-NLANYGNTSAASIPL 365 (401)
Q Consensus 287 ~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~-~l~~~Gn~~sasi~~ 365 (401)
+++|+|++||+++++.++++|+++|+++|++++|||+|++||+|.++++.++++||+++||+.. ++++||||++||+|+
T Consensus 34 ~~~m~G~~Vf~~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~ 113 (148)
T d1u6ea2 34 FVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPL 113 (148)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHH
T ss_pred cEEeecHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999875 589999999999999
Q ss_pred HHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEEe
Q 015758 366 ALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 366 ~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
+|+++++++++++||++++++||+|++|+++++|.
T Consensus 114 ~L~~a~~~g~i~~Gd~vll~gfG~G~s~~a~llrv 148 (148)
T d1u6ea2 114 AMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM 148 (148)
T ss_dssp HHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEeC
Confidence 99999999999999999999999999999999984
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.91 E-value=2.6e-25 Score=189.20 Aligned_cols=103 Identities=25% Similarity=0.421 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh---cccccCccccChHHHHHHHHHHcCC
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS---NLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~---~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
.++.+.+.++++|+++|++++|||+|++||+|.++++.++++||++++++.. ++++|||+++||+|++|++++++++
T Consensus 41 ~i~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~~~~ 120 (148)
T d1u0ma2 41 TMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGG 120 (148)
T ss_dssp GHHHHHHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHHcCC
Confidence 4467889999999999999999999999999999999999999999999863 7899999999999999999999999
Q ss_pred CCCCCEEEEEeeehhhhheeeEEEeC
Q 015758 376 VKPGHTIAAAGFGAGLTWGSAILRWG 401 (401)
Q Consensus 376 ~~~Gd~ill~~~G~G~s~~a~llr~~ 401 (401)
+++||+|+++|||+|+||+++++||.
T Consensus 121 ~~~Gd~ill~gfG~G~s~~~~llrW~ 146 (148)
T d1u0ma2 121 VEEGARGLLAGFGPGITAEMSLGCWQ 146 (148)
T ss_dssp CCSSCCCEEEEEETTTEEEEEEEEEE
T ss_pred CCCCCEEEEEEEchHhEeeEEEEEEc
Confidence 99999999999999999999999994
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=99.88 E-value=1.9e-23 Score=178.81 Aligned_cols=114 Identities=19% Similarity=0.291 Sum_probs=104.0
Q ss_pred cEEEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhh---cccccCccccChH
Q 015758 287 SIYMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVIS---NLANYGNTSAASI 363 (401)
Q Consensus 287 ~~~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~---~l~~~Gn~~sasi 363 (401)
+..|.++++++++.+.++++++++|++++++.+|||+|++||+|.+|++.++++|+++++++.. ++.+|||++||++
T Consensus 29 ~~~~l~~~Vp~~v~~~i~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasi 108 (156)
T d1u0ua2 29 LTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACV 108 (156)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHH
T ss_pred EEEEEcchhHHHHHHHHHHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhCCCcccchhhHHHHhhcCCCCcccH
Confidence 3567789999999999999999999999999999999999999999999999999999999974 4789999999999
Q ss_pred HHHHHHHHHcC----C---CCCCCEEEEEeeehhhhheeeEEEe
Q 015758 364 PLALDEAVRSG----K---VKPGHTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 364 ~~~L~~~l~~g----~---~~~Gd~ill~~~G~G~s~~a~llr~ 400 (401)
|+.|+++++++ . .+.||+++++|||+|+||++++||+
T Consensus 109 p~~L~~~~~~~~~~~~~~~~~~~~~~~~~gfG~Glt~~~~llr~ 152 (156)
T d1u0ua2 109 HFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKS 152 (156)
T ss_dssp HHHHHHHHHHHHHHTCSBSBTTBSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHhhhhccCCCcCCCCCEEEEEEECHHHhHHHHHHee
Confidence 99999987653 2 2356999999999999999999996
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.88 E-value=1.5e-23 Score=178.85 Aligned_cols=111 Identities=27% Similarity=0.396 Sum_probs=101.8
Q ss_pred EchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhc---ccccCccccChHHHH
Q 015758 290 MNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISN---LANYGNTSAASIPLA 366 (401)
Q Consensus 290 m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~---l~~~Gn~~sasi~~~ 366 (401)
+.++++++++.+.++++++++|+++|++.+|||+|++||+|.+|++.++++|+++++++..+ +.+||||+|||+|+.
T Consensus 31 ~l~r~Vp~~i~~~i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~v 110 (154)
T d1bi5a2 31 HLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFI 110 (154)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHH
T ss_pred ecccchHHHHHHHHHHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999754 889999999999999
Q ss_pred HHHHHHc----CCCCCC---CEEEEEeeehhhhheeeEEEe
Q 015758 367 LDEAVRS----GKVKPG---HTIAAAGFGAGLTWGSAILRW 400 (401)
Q Consensus 367 L~~~l~~----g~~~~G---d~ill~~~G~G~s~~a~llr~ 400 (401)
|++++++ +..+.| |++++++||+|+||++++||+
T Consensus 111 L~~~~~~~~~~~~~~~g~~~~~~~~~aFG~Glt~~~~llr~ 151 (154)
T d1bi5a2 111 LDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRS 151 (154)
T ss_dssp HHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHhhhccCCcccCCCcCEEEEEEEchHHhHHHHHHhc
Confidence 9998875 334444 889999999999999999996
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=99.88 E-value=2.2e-23 Score=178.78 Aligned_cols=110 Identities=24% Similarity=0.380 Sum_probs=100.7
Q ss_pred EchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhh---hcccccCccccChHHHH
Q 015758 290 MNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVI---SNLANYGNTSAASIPLA 366 (401)
Q Consensus 290 m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~---~~l~~~Gn~~sasi~~~ 366 (401)
+.+++|++++.+.++++++++|+++|++.+|||+|++||+|.+|++.++++||++++++. +++.+||||+|||||++
T Consensus 36 ~l~r~Vp~~~~~~v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~v 115 (160)
T d1ee0a2 36 QLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFI 115 (160)
T ss_dssp EECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHH
T ss_pred eeCchhHHHHHHHHHHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHH
Confidence 558899999999999999999999999999999999999999999999999999999996 46889999999999999
Q ss_pred HHHHHHcC----CCCC---CCEEEEEeeehhhhheeeEEE
Q 015758 367 LDEAVRSG----KVKP---GHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 367 L~~~l~~g----~~~~---Gd~ill~~~G~G~s~~a~llr 399 (401)
|+++++++ ..+. +|+++++|||+|+||++++||
T Consensus 116 L~~~~~~~~~~~~~~~g~~~d~~ll~afG~Glt~~~~llr 155 (160)
T d1ee0a2 116 IDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLR 155 (160)
T ss_dssp HHHHHHHHHHTTCSBTBTTBSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHhhhhhcCCCCcCCCcCEEEEEEEChHHHHHHHHHe
Confidence 99988753 2222 378999999999999999998
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.38 E-value=6.8e-12 Score=114.45 Aligned_cols=164 Identities=22% Similarity=0.208 Sum_probs=115.7
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCcceeEe---------------cCCCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGIRNRRV---------------LSGKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi~~R~~---------------~~~~e~~~~la~~Aa 124 (401)
.|.|.|+|...|.-. +.+++++.+ +.+ +.|-. .+...+.. ...-.....++..|+
T Consensus 3 rVaItG~G~vsp~g~-~~~e~w~~l~~G~s~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (249)
T d1j3na1 3 RVVVTGLGALTPIGV-GQEAFHKAQLAGKSGVRPITRFDA--SALPVRIAAEVDVDPGAYLDRKELRRLDRFVQYALIAA 79 (249)
T ss_dssp CEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCC--TTSSCCEEECCCCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred cEEEECCEeECCCcC-CHHHHHHHHHcCCCccccCCcccc--ccCCccccccccccccccccHHHHhhCCHHHHHHHHHH
Confidence 389999999999765 778887643 211 11100 00000000 011235688899999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCCC-------------------C-------C-chHHHHHHHcCCCCCCeeEee
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPED-------------------L-------F-GGATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~~-------------------~-------~-~~a~~i~~~lGl~~~~~~~~i 173 (401)
++||+++|+++++++ .|+++++.+.. . . ..+.+|+..+|++ .+++.+
T Consensus 80 ~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~--Gp~~tv 157 (249)
T d1j3na1 80 QLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFT--GPSSTV 157 (249)
T ss_dssp HHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC--SCBCCB
T ss_pred HHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCC--CCcccc
Confidence 999999999887754 66777765420 0 1 1267999999994 889999
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CC-----------CCCC-CCccccccceeEEEE
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FT-----------DWTD-RGSCILFGDAAGAVL 230 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~-----------~~~d-r~~~~lfGDGAaAvl 230 (401)
+++|++++.||..|.++|++|+++.+||.++|.... .+ ++-| ....+++||||+++|
T Consensus 158 ~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~dG~v~gEGa~~lv 237 (249)
T d1j3na1 158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237 (249)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEEE
T ss_pred ccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCCCEeeEeEEEEEE
Confidence 999999999999999999999999999999997432 11 1111 224578999999999
Q ss_pred Eeecc
Q 015758 231 VQACD 235 (401)
Q Consensus 231 l~~~~ 235 (401)
|++.+
T Consensus 238 Le~~~ 242 (249)
T d1j3na1 238 LEAYE 242 (249)
T ss_dssp EEEHH
T ss_pred EccHH
Confidence 99854
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=4.2e-11 Score=109.08 Aligned_cols=164 Identities=15% Similarity=0.128 Sum_probs=114.0
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh-C-Cc-----hhhhhhhcCcceeEec----------------CCCCCHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV-D-TS-----DEWISVRTGIRNRRVL----------------SGKESLTGLAVEA 123 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~-~-~~-----~~~i~~~~Gi~~R~~~----------------~~~e~~~~la~~A 123 (401)
.|.|.|+|...|--. +.+++++.+ . .+ +.|- ..++..+... ..-+....|+..|
T Consensus 3 rVaItG~G~vtp~G~-~~~~~w~~L~~G~s~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~a 79 (250)
T d2gfva1 3 RVVVTGLGMLSPVGN-TVESTWKALLAGQSGISLIDHFD--TSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVA 79 (250)
T ss_dssp CEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSC--CTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHH
T ss_pred eEEEECCeeECCCcC-CHHHHHHHHHcCCCeeecCCccc--ccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHH
Confidence 479999999999874 677887754 1 10 0110 0011111110 0113467899999
Q ss_pred HHHHHHhCCCCcCCCC----EEEEEecCCCC-----------------C---------Cc-hHHHHHHHcCCCCCCeeEe
Q 015758 124 ASRALQMAEVNPEDVD----LVLMCTSTPED-----------------L---------FG-GATQIPKALGCKNNPLAYD 172 (401)
Q Consensus 124 a~~aL~~agi~~~~Id----~li~~t~~~~~-----------------~---------~~-~a~~i~~~lGl~~~~~~~~ 172 (401)
+++||+++|+++++.+ .++++++.... . .. .+.+|+..||+ ..+++.
T Consensus 80 a~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~t 157 (250)
T d2gfva1 80 GVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL--RGPSIS 157 (250)
T ss_dssp HHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC--CSCEEC
T ss_pred HHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC--CCCccc
Confidence 9999999999877654 35566654210 0 11 26789999999 489999
Q ss_pred eCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCC-C----------CC-----------CCCC-CCccccccceeEEE
Q 015758 173 ITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALS-R----------FT-----------DWTD-RGSCILFGDAAGAV 229 (401)
Q Consensus 173 i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s-~----------~~-----------~~~d-r~~~~lfGDGAaAv 229 (401)
+.++|++++.||..|.++|++|+++.+||+++|... . .+ ++-| ....+++||||+++
T Consensus 158 v~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGaa~l 237 (250)
T d2gfva1 158 IATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 237 (250)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEEEEE
T ss_pred cccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeeeEEEEE
Confidence 999999999999999999999999999999999632 1 11 1112 22457999999999
Q ss_pred EEeecc
Q 015758 230 LVQACD 235 (401)
Q Consensus 230 ll~~~~ 235 (401)
|||+.+
T Consensus 238 VLE~~~ 243 (250)
T d2gfva1 238 VLEEYE 243 (250)
T ss_dssp EEEEHH
T ss_pred EECcHH
Confidence 999754
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.27 E-value=3.8e-11 Score=109.06 Aligned_cols=165 Identities=14% Similarity=0.155 Sum_probs=115.1
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh-C-Cc-----hhhhh---------------hhcCcceeEecCCCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV-D-TS-----DEWIS---------------VRTGIRNRRVLSGKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~-~-~~-----~~~i~---------------~~~Gi~~R~~~~~~e~~~~la~~Aa 124 (401)
.|.|.|||...|.-. +.+++++.+ . .+ ++|-. ....+..+.... .+....++..++
T Consensus 3 rVaItG~G~v~p~G~-~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~d~~~~~~~~a~ 80 (250)
T d1e5ma1 3 RVVVTGLGAITPIGN-TLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKR-MDRFCHFAVCAS 80 (250)
T ss_dssp CEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHT-SCHHHHHHHHHH
T ss_pred eEEEECCeeECCCCC-CHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhh-cCcHHHHHHHHH
Confidence 589999999999984 788888764 1 11 11100 011111111111 135678999999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCC-------------------CC-------C-chHHHHHHHcCCCCCCeeEee
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPE-------------------DL-------F-GGATQIPKALGCKNNPLAYDI 173 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~-------------------~~-------~-~~a~~i~~~lGl~~~~~~~~i 173 (401)
.+||+++|++++.+. .++++++... .. . ..+..++..+|+ ..+++.+
T Consensus 81 ~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl--~Gp~~tv 158 (250)
T d1e5ma1 81 QQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA--KGPNNCT 158 (250)
T ss_dssp HHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC--CSCEECC
T ss_pred HHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC--CCCCccc
Confidence 999999999876653 4566654321 00 1 137789999999 4899999
Q ss_pred CccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC----------CCC-----------CCC-CCccccccceeEEEE
Q 015758 174 TAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL-SR----------FTD-----------WTD-RGSCILFGDAAGAVL 230 (401)
Q Consensus 174 ~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~-s~----------~~~-----------~~d-r~~~~lfGDGAaAvl 230 (401)
+++|++++.||.+|.++|++|.++.+||+++|.. +. .+. +-| ....++.||||+++|
T Consensus 159 ~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~~dG~~~gEGa~~~v 238 (250)
T d1e5ma1 159 VTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGILI 238 (250)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEEEE
T ss_pred cccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCCCCCCEeeEeeEEEEE
Confidence 9999999999999999999999999999999963 31 111 111 124578999999999
Q ss_pred Eeecc
Q 015758 231 VQACD 235 (401)
Q Consensus 231 l~~~~ 235 (401)
|++.+
T Consensus 239 Le~l~ 243 (250)
T d1e5ma1 239 LEELE 243 (250)
T ss_dssp EEEHH
T ss_pred EeeHH
Confidence 99754
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.26 E-value=1.6e-11 Score=113.58 Aligned_cols=100 Identities=18% Similarity=0.090 Sum_probs=90.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC--CchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 111 SGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL--FGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 111 ~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~--~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
..+.++.+|+..+++++|+++|++|++||.|+++++.+... ...+.+++...|++.+.++++|++.|+|++.+|..|.
T Consensus 19 l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVn~~CaSg~~Ai~~a~ 98 (273)
T d1ulqa1 19 LASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAA 98 (273)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccceEEEecccchHHHHHHHHH
Confidence 35788999999999999999999999999999999866432 3468888888999878999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCC
Q 015758 189 CHIRGGGFRNVLVIGGDALSRF 210 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~~ 210 (401)
+.|++|..+.+|++|+|.+|+.
T Consensus 99 ~~I~~G~~d~~lagG~EsmS~~ 120 (273)
T d1ulqa1 99 RAIWAGEGKVYIGSGVESMSRA 120 (273)
T ss_dssp HHHHTTSCSEEEEEEEEESSSC
T ss_pred HHHhcCCCccceeeeccccchh
Confidence 9999999999999999999953
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.24 E-value=2.4e-11 Score=111.91 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=94.0
Q ss_pred hcCcceeEecCCCCCHHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCC-CchHHHHHHHcCCCCCCeeEeeCccChH
Q 015758 101 RTGIRNRRVLSGKESLTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDL-FGGATQIPKALGCKNNPLAYDITAACSG 179 (401)
Q Consensus 101 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~-~~~a~~i~~~lGl~~~~~~~~i~~~C~~ 179 (401)
+|-+.++.-...+.++.+|+..+++++|+++|++|++||.|++++..+... ...+.+++...|++...++++|+..|+|
T Consensus 12 RTP~g~~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vpa~tv~~~C~S 91 (268)
T d1m3ka1 12 RTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLAGS 91 (268)
T ss_dssp ECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGH
T ss_pred eCcccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCcccccceeecccCcc
Confidence 444443333345789999999999999999999999999999999865432 2468889999999878999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCCC
Q 015758 180 FLLGLVSAACHIRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 180 ~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~ 209 (401)
++.++.+|++.|++|..+.+|++|.|.+|+
T Consensus 92 g~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 92 GLRAVALGMQQIATGDASIIVAGGMESMSM 121 (268)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEESTT
T ss_pred cchHHHHHHHHHhCCCceEEeecccccccc
Confidence 999999999999999999999999999985
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.12 E-value=1.2e-10 Score=106.81 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=88.8
Q ss_pred CCCCHHHHHHHHHHHHHHh-CCCCcCCCCEEEEEecCCCC--CCchHHHHHHHcCCCCCCeeEeeCccChHHHHHHHHHH
Q 015758 112 GKESLTGLAVEAASRALQM-AEVNPEDVDLVLMCTSTPED--LFGGATQIPKALGCKNNPLAYDITAACSGFLLGLVSAA 188 (401)
Q Consensus 112 ~~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~~~~~--~~~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~~A~ 188 (401)
.+.++.+|+..+++++|++ +|++|++||.||+++..+.. ....+.+++-..|++.+.++++|++.|+|++.++.+|+
T Consensus 26 ~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~vp~~tV~~~C~Sgl~Ai~~aa 105 (262)
T d1wdkc1 26 RNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAA 105 (262)
T ss_dssp TTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcccccchhhccccccHHHHHHHHHH
Confidence 4678999999999999997 89999999999999987643 23468888888899888999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCC
Q 015758 189 CHIRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 189 ~~l~~g~~~~vLvv~~d~~s~ 209 (401)
+.|++|..+.+|++|.|.+|+
T Consensus 106 ~~I~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 106 QAIMTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp HHHHTTSCSEEEEEEEEETTT
T ss_pred HHHHhhcCCceeeeccccccc
Confidence 999999999999999999985
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.02 E-value=1.2e-09 Score=96.91 Aligned_cols=111 Identities=16% Similarity=0.167 Sum_probs=89.1
Q ss_pred EEchHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCc-----hhhh----h---cccccC
Q 015758 289 YMNGKEVFRFAVRVVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPM-----ERVI----S---NLANYG 356 (401)
Q Consensus 289 ~m~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~-----e~~~----~---~l~~~G 356 (401)
.+||+--.....+.+.++.++.+++.|.+.+|+|++++|++..++.+...+.|.... +++. . --.+.|
T Consensus 28 vvDG~~S~~~Yl~~l~~~~~~~~~~~g~~~~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iG 107 (221)
T d1xpma2 28 LVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVG 107 (221)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTC
T ss_pred eECCcchHHHHHHHHHHHHHHHHHHcCCChhhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcC
Confidence 356765555667888899999999999999999999999999999988777764322 2211 1 124789
Q ss_pred ccccChHHHHHHHHHHcCCCCCCCEEEEEeeehhhhheeeEEE
Q 015758 357 NTSAASIPLALDEAVRSGKVKPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 357 n~~sasi~~~L~~~l~~g~~~~Gd~ill~~~G~G~s~~a~llr 399 (401)
|+++||+++.|..+++++.+.+|++|+++++|+|......-++
T Consensus 108 N~YTaSlyl~L~Sll~~~~~~~G~rIglfSYGSG~~ae~fs~~ 150 (221)
T d1xpma2 108 NIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSAT 150 (221)
T ss_dssp CCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred CcchHHHHHHHHhhhccccCCCCCEEEEEEecCCcceeEEEEE
Confidence 9999999999999999998899999999999999865544433
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.99 E-value=5.2e-10 Score=102.71 Aligned_cols=99 Identities=12% Similarity=0.009 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhC----CCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCCeeEeeCccChHHHHHHH
Q 015758 111 SGKESLTGLAVEAASRALQMA----EVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNPLAYDITAACSGFLLGLV 185 (401)
Q Consensus 111 ~~~e~~~~la~~Aa~~aL~~a----gi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~~~~~i~~~C~~~~~aL~ 185 (401)
..+.++.+|+..+++++|+++ +++|++||.|++++..+.... ..+.+++-..|++...++++|+..|+|++.+|.
T Consensus 30 l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~aglp~~vpa~tVnr~CaSg~~Ai~ 109 (269)
T d1afwa1 30 FKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVN 109 (269)
T ss_dssp TTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhccccccccchhccccchHHHHHHH
Confidence 357889999999999999876 699999999999987654222 247788888999888999999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeccCCC
Q 015758 186 SAACHIRGGGFRNVLVIGGDALSR 209 (401)
Q Consensus 186 ~A~~~l~~g~~~~vLvv~~d~~s~ 209 (401)
.|++.|++|..+.+|++|+|.+|+
T Consensus 110 ~Aa~~I~~G~~divlagG~EsmS~ 133 (269)
T d1afwa1 110 DIANKIKVGQIDIGLALGVESMTN 133 (269)
T ss_dssp HHHHHHHTTSCSEEEEEEEEEHHH
T ss_pred HHHHHHhhccccceeeeecccccc
Confidence 999999999999999999999985
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.92 E-value=9.1e-09 Score=93.66 Aligned_cols=118 Identities=18% Similarity=0.202 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcCC-----CCEEEEEecCCC-------------------C-------CCc-hHHHHHHHcC
Q 015758 116 LTGLAVEAASRALQMAEVNPED-----VDLVLMCTSTPE-------------------D-------LFG-GATQIPKALG 163 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~~~~-----Id~li~~t~~~~-------------------~-------~~~-~a~~i~~~lG 163 (401)
....+..|..+++++++....+ ...+........ . ... .+.+|+..+|
T Consensus 88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 167 (270)
T d2ix4a1 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (270)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence 4566788889999998865432 223333332210 0 011 3789999999
Q ss_pred CCCCCeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----------CC------------C-CCCCCcc
Q 015758 164 CKNNPLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSR-----------FT------------D-WTDRGSC 219 (401)
Q Consensus 164 l~~~~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~-----------~~------------~-~~dr~~~ 219 (401)
++ .+++.|+.+|++++.||..|.++|++|+++.+||+++|.... .+ + +..+...
T Consensus 168 l~--Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD~~a~G 245 (270)
T d2ix4a1 168 FQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDG 245 (270)
T ss_dssp CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCCS
T ss_pred CC--CCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCCCCCCC
Confidence 94 899999999999999999999999999999999999987432 11 1 1122346
Q ss_pred ccccceeEEEEEeecc
Q 015758 220 ILFGDAAGAVLVQACD 235 (401)
Q Consensus 220 ~lfGDGAaAvll~~~~ 235 (401)
+++||||+++||++.+
T Consensus 246 ~v~gEGaa~~vLe~l~ 261 (270)
T d2ix4a1 246 FVIGEGSGVIVLEEYE 261 (270)
T ss_dssp BCBBCEEEEEEEEEHH
T ss_pred EeeEeeEEEEEEeeHH
Confidence 8999999999999854
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.89 E-value=1.3e-08 Score=89.93 Aligned_cols=137 Identities=15% Similarity=0.222 Sum_probs=97.1
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhh---------------hhhhcCcceeEecCCCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEW---------------ISVRTGIRNRRVLSGKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~---------------i~~~~Gi~~R~~~~~~e~~~~la~~Aa 124 (401)
.|.|.|+|...|.-. +.+++++.+ +.+ +.| .....++..+.... -+....|+..|+
T Consensus 2 RVvItG~G~v~p~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~aa 79 (216)
T d1tqya1 2 RVVITGVGVRAPGGN-GTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDR-MDRASQFAVACA 79 (216)
T ss_dssp CEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHH-SCHHHHHHHHHH
T ss_pred eEEEEeceeECCCCC-CHHHHHHHHHcCCCEeecCCccCCCcccccccccccccccccccChhhhcc-cCcchhhHHHHH
Confidence 378999999999975 778887754 211 000 00111121111111 135789999999
Q ss_pred HHHHHhCCCCcCCCC----EEEEEecCCC---------------------------CC-----Cc-hHHHHHHHcCCCCC
Q 015758 125 SRALQMAEVNPEDVD----LVLMCTSTPE---------------------------DL-----FG-GATQIPKALGCKNN 167 (401)
Q Consensus 125 ~~aL~~agi~~~~Id----~li~~t~~~~---------------------------~~-----~~-~a~~i~~~lGl~~~ 167 (401)
++||+++|+++++++ .++++++... +. +. .+.+++..+|+ .
T Consensus 80 ~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~--~ 157 (216)
T d1tqya1 80 REAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA--E 157 (216)
T ss_dssp HHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC--C
T ss_pred HHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCc--c
Confidence 999999999987754 2444444320 00 01 26889999999 4
Q ss_pred CeeEeeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccC
Q 015758 168 PLAYDITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDAL 207 (401)
Q Consensus 168 ~~~~~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~ 207 (401)
.+.+.+..+|++++.||..|.++|++|+++.+||+++|..
T Consensus 158 Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~ 197 (216)
T d1tqya1 158 GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP 197 (216)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred ccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 8999999999999999999999999999999999999964
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=2.3e-08 Score=90.30 Aligned_cols=164 Identities=16% Similarity=0.193 Sum_probs=110.9
Q ss_pred CeEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcCcceeEecC---------------CCCCHHHHHHHHH
Q 015758 67 GCKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTGIRNRRVLS---------------GKESLTGLAVEAA 124 (401)
Q Consensus 67 ~v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~Gi~~R~~~~---------------~~e~~~~la~~Aa 124 (401)
.|.|.|+|...|.-. +.+++++.+ +.+ +++-. .+........ .......+...++
T Consensus 3 RVvITG~G~i~p~G~-~~~~~w~~L~~G~sgi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T d2vbaa1 3 RAVITGLGIVSSIGN-NQQEVLASLREGRSGITFSQELKD--SGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSM 79 (253)
T ss_dssp CEEEEEEEEEBTTBS-SHHHHHHHHHHTCCCEEECHHHHH--TTCSCCEEECCCCCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred cEEEEccEEECCCCC-CHHHHHHHHHcCCCccccCCcccc--ccCcccccccccccccccccchhhccchhhhhhhhHHH
Confidence 389999999999876 777777654 221 11111 1111111110 1123566889999
Q ss_pred HHHHHhCCCCcCCC-----CEEEEEecCCC-------------C--------------CC-chHHHHHHHcCCCCCCeeE
Q 015758 125 SRALQMAEVNPEDV-----DLVLMCTSTPE-------------D--------------LF-GGATQIPKALGCKNNPLAY 171 (401)
Q Consensus 125 ~~aL~~agi~~~~I-----d~li~~t~~~~-------------~--------------~~-~~a~~i~~~lGl~~~~~~~ 171 (401)
.++++++++..+.. -.++.+++.+. . .. ..+.+|+..+|+ ..+.+
T Consensus 80 ~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~--~Gp~~ 157 (253)
T d2vbaa1 80 EQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKI--HGVNY 157 (253)
T ss_dssp HHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTC--CSCEE
T ss_pred HHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCc--cccee
Confidence 99999999864321 13444544321 0 01 136789999999 48999
Q ss_pred eeCccChHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------C------------C-CCCCCccccccceeEE
Q 015758 172 DITAACSGFLLGLVSAACHIRGGGFRNVLVIGGDALSRF----------T------------D-WTDRGSCILFGDAAGA 228 (401)
Q Consensus 172 ~i~~~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~~s~~----------~------------~-~~dr~~~~lfGDGAaA 228 (401)
.+.++|++++.||..|.++|++|+++.+||.++|.+... + + |......+++|+||++
T Consensus 158 ~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G~v~gEGa~~ 237 (253)
T d2vbaa1 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237 (253)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEEE
T ss_pred eeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcchhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCCEeeeeEEEE
Confidence 999999999999999999999999999999999975410 1 0 1112245789999999
Q ss_pred EEEeecc
Q 015758 229 VLVQACD 235 (401)
Q Consensus 229 vll~~~~ 235 (401)
+||++.+
T Consensus 238 lvLe~le 244 (253)
T d2vbaa1 238 VVVEELE 244 (253)
T ss_dssp EEEEEHH
T ss_pred EEEccHH
Confidence 9999754
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.78 E-value=1.7e-08 Score=88.70 Aligned_cols=135 Identities=24% Similarity=0.233 Sum_probs=95.9
Q ss_pred eEEEEEEEEcCCCccChHHHHhhh--CCc-----hhhhhhhcC---------cceeEecCC-----CCCHHHHHHHHHHH
Q 015758 68 CKLVGCGSAVPTLQISNDDLAKIV--DTS-----DEWISVRTG---------IRNRRVLSG-----KESLTGLAVEAASR 126 (401)
Q Consensus 68 v~I~gig~~lP~~~v~~~~l~~~~--~~~-----~~~i~~~~G---------i~~R~~~~~-----~e~~~~la~~Aa~~ 126 (401)
|.|.|+|...|.-. +.+++++.+ +.+ +.|-..... ...+.+..+ -.....|+..|+++
T Consensus 2 VvITG~G~vsp~g~-~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 80 (208)
T d1tqyb1 2 VLITGVGVVAPNGL-GLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADW 80 (208)
T ss_dssp EEEEEEEEEETTEE-SHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHHH
T ss_pred EEEEcceeECCCcC-CHHHHHHHHHcCCCceecCcccCchhcccccccccccccccccCChhHhhccccccccccccccc
Confidence 78999999999876 777777654 111 111111110 000000011 12467899999999
Q ss_pred HHHhCCCCcCCCC----EEEEEecCCC-----------------C---------CCc-hHHHHHHHcCCCCCCeeEeeCc
Q 015758 127 ALQMAEVNPEDVD----LVLMCTSTPE-----------------D---------LFG-GATQIPKALGCKNNPLAYDITA 175 (401)
Q Consensus 127 aL~~agi~~~~Id----~li~~t~~~~-----------------~---------~~~-~a~~i~~~lGl~~~~~~~~i~~ 175 (401)
||+++|+++++++ .++++++.+. . ... .+.+|+..+|++ .+.+.+..
T Consensus 81 Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~tv~t 158 (208)
T d1tqyb1 81 ALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMR--GPSSALVA 158 (208)
T ss_dssp HHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCC--SSCEEEEC
T ss_pred cchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhccccc--ceeeeccc
Confidence 9999999988774 4666765431 0 011 267999999994 89999999
Q ss_pred cChHHHHHHHHHHHHHHcCCCCeEEEEEecc
Q 015758 176 ACSGFLLGLVSAACHIRGGGFRNVLVIGGDA 206 (401)
Q Consensus 176 ~C~~~~~aL~~A~~~l~~g~~~~vLvv~~d~ 206 (401)
+|++++.||..|.++|++| ++.+||.++|.
T Consensus 159 ACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~ 188 (208)
T d1tqyb1 159 EQAGGLDALGHARRTIRRG-TPLVVSGGVDS 188 (208)
T ss_dssp GGGHHHHHHHHHHHHHHHT-CSEEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHcC-CCEEEECcccc
Confidence 9999999999999999999 89999999996
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.38 E-value=1.3e-06 Score=75.73 Aligned_cols=96 Identities=22% Similarity=0.186 Sum_probs=71.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchhhhhcccccCccccChHHHHHHHHH---HcCC
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMERVISNLANYGNTSAASIPLALDEAV---RSGK 375 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l---~~g~ 375 (401)
.++|+++|++++++++|||++..|..+.+..|.++ +.++-..-.+......+||+.+|+-.+.|...+ +++.
T Consensus 65 ~~~i~~aL~~a~i~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ 144 (194)
T d1tqyb2 65 ERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGV 144 (194)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTS
T ss_pred hhhhhhhcccccccccceeeeeccccCcccccHHHhhhhhhhhhccccccccccccccccccccccceehhhhhhhhhce
Confidence 37888999999999999999999999988877644 445532212224567999999998666655443 3342
Q ss_pred C------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 376 V------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 376 ~------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
+ .+-++++..+||.|.+.++++||
T Consensus 145 ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~ 192 (194)
T d1tqyb2 145 IAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLR 192 (194)
T ss_dssp BCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEE
T ss_pred eccccCCCCCCcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEe
Confidence 2 12357899999999999999987
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.32 E-value=1.7e-06 Score=75.61 Aligned_cols=98 Identities=23% Similarity=0.262 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchhhh--hcccccCccccChHHHHHHHHHH--
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMERVI--SNLANYGNTSAASIPLALDEAVR-- 372 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l~-- 372 (401)
...++++++|++++++++|||++..|..+.+..|.++ +.++-....+. .....+||+.+|+-.+.|..++.
T Consensus 66 ~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l 145 (205)
T d1tqya2 66 EMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLAL 145 (205)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHH
T ss_pred ccchhhhhHHhhhcCCccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHH
Confidence 3447788999999999999999999999998877544 44543222232 34569999999997777666544
Q ss_pred -cCCC------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 373 -SGKV------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 -~g~~------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
++.+ .+-++++..+||.|.+.+++||+
T Consensus 146 ~~g~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~ 197 (205)
T d1tqya2 146 EHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLR 197 (205)
T ss_dssp HHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred hCCeEcccCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEe
Confidence 2311 12357889999999999999987
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.30 E-value=2.1e-06 Score=68.25 Aligned_cols=94 Identities=16% Similarity=0.133 Sum_probs=78.5
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhcc--cccCccccChHHHHHHHHHHcCCCCCCCE
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNL--ANYGNTSAASIPLALDEAVRSGKVKPGHT 381 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l--~~~Gn~~sasi~~~L~~~l~~g~~~~Gd~ 381 (401)
..+++++|+++|++++|||.|-+|.+.....-...+.|+++++|++.+- --+||...||-...+-+++.+ ++.+++
T Consensus 27 v~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~--L~~~~~ 104 (124)
T d1afwa2 27 AYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRE--LKKDQI 104 (124)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHH--SCTTCE
T ss_pred HHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCccceecCCcCCchHHHHHHHHHH--hccCCE
Confidence 4788999999999999999999999999999999999999999997543 278999999998888888875 456777
Q ss_pred EEEEeeehhhhheeeEEE
Q 015758 382 IAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 382 ill~~~G~G~s~~a~llr 399 (401)
.+...+..|..-.+++++
T Consensus 105 glas~C~ggG~G~a~~ie 122 (124)
T d1afwa2 105 GVVSMCIGTGMGAAAIFI 122 (124)
T ss_dssp EEEEEEETTTEEEEEEEE
T ss_pred EEEEEcccCCcEEEEEEE
Confidence 776666666666677765
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.23 E-value=1.6e-06 Score=68.85 Aligned_cols=95 Identities=20% Similarity=0.062 Sum_probs=73.8
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCCCchhhhhccc--ccCccccChHHHHHHHHHHcCCCCCCCEE
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDVPMERVISNLA--NYGNTSAASIPLALDEAVRSGKVKPGHTI 382 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl~~e~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~Gd~i 382 (401)
.+++++|+++|++.+|||+|-+|.+.....-...+.|+++++|++.+-. -+||...||-...+-.++.+-+-+.|.+.
T Consensus 26 ~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~~~~~~G 105 (124)
T d1m3ka2 26 PASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKG 105 (124)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCccccccCcCccchhHHHHHHHHHHhcCCCEE
Confidence 7789999999999999999999999999888999999999999975543 77999888866554444443222456676
Q ss_pred EEEeeehhhhheeeEEE
Q 015758 383 AAAGFGAGLTWGSAILR 399 (401)
Q Consensus 383 ll~~~G~G~s~~a~llr 399 (401)
+...+..|..-.+++++
T Consensus 106 las~C~gGG~g~A~liE 122 (124)
T d1m3ka2 106 LATLCIGGGMGVAMCIE 122 (124)
T ss_dssp EEEEEETTTEEEEEEEE
T ss_pred EEEecccccceeEEEEE
Confidence 76666666666777765
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=97.97 E-value=9.9e-06 Score=64.26 Aligned_cols=95 Identities=21% Similarity=0.111 Sum_probs=70.3
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHH--cCCCchhhhhccc--ccCccccChHHHHHHHHHHcCCCCCCC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANR--LDVPMERVISNLA--NYGNTSAASIPLALDEAVRSGKVKPGH 380 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~--lgl~~e~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~Gd 380 (401)
.+++++|+++|++++|||.|-+|.+.....-...+. ++++.+|++.+-. -+||...||-...+-+++.+-+-+.+.
T Consensus 25 ~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlGHP~GASGari~~tl~~~L~~~~~~ 104 (125)
T d1ulqa2 25 PATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQ 104 (125)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCCcccccCCccccchhHHHHHHHHHHhcCCC
Confidence 778999999999999999999999988776666666 6778889875432 789997777666544444432224566
Q ss_pred EEEEEeeehhhhheeeEEE
Q 015758 381 TIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 381 ~ill~~~G~G~s~~a~llr 399 (401)
+.+...+..|..-.+++++
T Consensus 105 ~G~as~C~gGG~g~A~~iE 123 (125)
T d1ulqa2 105 FGLATMCIGVGQGIAVVVE 123 (125)
T ss_dssp EEEEEEEETTTEEEEEEEE
T ss_pred EEEEEecccccceeEEEEE
Confidence 7676666666666777765
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=97.65 E-value=4.4e-05 Score=60.70 Aligned_cols=95 Identities=20% Similarity=0.102 Sum_probs=69.4
Q ss_pred HHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHHHHcCC---Cchhhhhccc--ccCccccChHHHHHHHHHHcCCCCCC
Q 015758 305 QTIESALEKAGLTMSSIDWLLLHQANQRIIDAVANRLDV---PMERVISNLA--NYGNTSAASIPLALDEAVRSGKVKPG 379 (401)
Q Consensus 305 ~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~~~lgl---~~e~~~~~l~--~~Gn~~sasi~~~L~~~l~~g~~~~G 379 (401)
.+++++|+++|++++|||+|-+|.+.....-.+.+.+++ +.||++.+-. -+||...||-...+-+++.+-+-+.|
T Consensus 27 ~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~~~ 106 (128)
T d1wdkc2 27 PATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG 106 (128)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecCCCCcccccccccccchhHHHHHHHHHHhcCC
Confidence 678899999999999999999999988777777777654 5577765432 78999777766655555443333456
Q ss_pred CEEEEEeeehhhhheeeEEE
Q 015758 380 HTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 380 d~ill~~~G~G~s~~a~llr 399 (401)
.+.+...+..|..-.+++++
T Consensus 107 ~~Glas~C~gGG~g~A~~iE 126 (128)
T d1wdkc2 107 TFGLSTMCIGLGQGIATVFE 126 (128)
T ss_dssp SEEEEEEEETTTEEEEEEEE
T ss_pred CEEEEEecccccceeEEEEE
Confidence 67776666666666777765
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=97.59 E-value=7.9e-05 Score=62.04 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchhhh--hcccccCccccChHHHHHHHHHH--
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMERVI--SNLANYGNTSAASIPLALDEAVR-- 372 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l~-- 372 (401)
...++++++|+++|++++|||++..|..+.+..|.++ +.++-....+. .....+||+.+|+-.+.|...+.
T Consensus 27 ~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v~s~K~~~GH~~~AsG~~~l~~~l~~~ 106 (161)
T d1e5ma2 27 GATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAI 106 (161)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceEEecccccccccccchhhHHHHhHHhc
Confidence 4458899999999999999999999999988887654 44542222222 34569999998888887766554
Q ss_pred -cCCC------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 373 -SGKV------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 -~g~~------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
++.+ .+-++++..+||.|.+-++++|+
T Consensus 107 ~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~ 158 (161)
T d1e5ma2 107 AEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFK 158 (161)
T ss_dssp HHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred ccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEe
Confidence 2311 12356789999999999998886
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.43 E-value=0.00016 Score=59.91 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHH-----HHHHcCCCchhhhhcccccCccccChHHHHHHHHHH---cC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDA-----VANRLDVPMERVISNLANYGNTSAASIPLALDEAVR---SG 374 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~-----i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~---~g 374 (401)
..++++++|++++++++|||++..|..+.+..|. +.+.++-+ -.+......+||+.+++-.+.|...+. ++
T Consensus 28 ~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~~-~~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g 106 (158)
T d1ox0a2 28 AIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE-VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHN 106 (158)
T ss_dssp HHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCSS-SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCCc-ccCcCcccccccchhhhhhhhhcccccccccc
Confidence 3478999999999999999999999999887765 34456521 112245679999988877766655543 23
Q ss_pred CC------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 375 KV------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+ ++-++++..+||.|.+-++++||
T Consensus 107 ~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~ 155 (158)
T d1ox0a2 107 FVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFK 155 (158)
T ss_dssp EECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred eeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEE
Confidence 11 12367888999999999999887
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.0002 Score=59.49 Aligned_cols=97 Identities=22% Similarity=0.220 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchhhh--hcccccCccccChHHHHHHHHHH---
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMERVI--SNLANYGNTSAASIPLALDEAVR--- 372 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~~~--~~l~~~Gn~~sasi~~~L~~~l~--- 372 (401)
..++++++|+++|++++|||++..|..+.++-|.++ +.++-....+. .....+||+-+|+-.+.|...+.
T Consensus 28 ~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~s~Ks~~GH~~~AsG~~~li~~ll~l~ 107 (161)
T d2gfva2 28 AALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALR 107 (161)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhccccccceeccccccccccHHHHHHHHHHHHHHHhc
Confidence 347888999999999999999999999998887543 44542222222 45579999999887776655543
Q ss_pred cCCC-------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 373 SGKV-------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 ~g~~-------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
++.+ .+-++.+..+||.|.+-++++||
T Consensus 108 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~ 159 (161)
T d2gfva2 108 DQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK 159 (161)
T ss_dssp SCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEE
T ss_pred CCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEE
Confidence 2311 12256788899999999999987
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=97.39 E-value=0.00011 Score=61.07 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCchh--hhhcccccCccccChHHHHHHHHHH--
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPMER--VISNLANYGNTSAASIPLALDEAVR-- 372 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~e~--~~~~l~~~Gn~~sasi~~~L~~~l~-- 372 (401)
....+++++|+++|++++|||++..|..+....|.++ +.++-...+ +......+||+.+|+-.+.|...+.
T Consensus 27 ~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~s~K~~~GH~~~asG~~~li~~~~~l 106 (159)
T d1j3na2 27 GAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQAL 106 (159)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceEecccccccccccccccchhhhhhhHh
Confidence 3457889999999999999999999999988877654 334211111 2245578999999988877655543
Q ss_pred -cCCC-----------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 373 -SGKV-----------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 -~g~~-----------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
++.+ .+-++.++.+||.|.+-++++||
T Consensus 107 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~ 157 (159)
T d1j3na2 107 YHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFK 157 (159)
T ss_dssp HHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEE
T ss_pred hCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEE
Confidence 3321 23367889999999999999987
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=96.68 E-value=0.0016 Score=53.68 Aligned_cols=96 Identities=22% Similarity=0.212 Sum_probs=69.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHHH-----HHcCCCc--hhh--hhcccccCccccChHHHHHHHHHH--
Q 015758 304 PQTIESALEKAGLTMSSIDWLLLHQANQRIIDAVA-----NRLDVPM--ERV--ISNLANYGNTSAASIPLALDEAVR-- 372 (401)
Q Consensus 304 ~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i~-----~~lgl~~--e~~--~~~l~~~Gn~~sasi~~~L~~~l~-- 372 (401)
..+++++|++++++++|||++..|..+...-|.++ +.++-.. ..+ -.....+||+-+|+-.+.|...+.
T Consensus 27 ~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i~s~K~~~GH~~~AsG~~~li~~~l~l 106 (161)
T d2ix4a2 27 VLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAI 106 (161)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceeeeccccccCCccchHHHHHHHHHHHHH
Confidence 36788999999999999999999999988877544 4444211 111 234568999999988887665433
Q ss_pred -cCC--------------------CC-----CCCEEEEEeeehhhhheeeEEE
Q 015758 373 -SGK--------------------VK-----PGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 373 -~g~--------------------~~-----~Gd~ill~~~G~G~s~~a~llr 399 (401)
++. +. .-++.+..+||.|.+-+++||+
T Consensus 107 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~ 159 (161)
T d2ix4a2 107 HHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 159 (161)
T ss_dssp HHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred hcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEE
Confidence 221 00 1256788899999999999986
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.59 E-value=0.0032 Score=51.15 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEe-eC----ccChHHHHHHHHHHHH
Q 015758 116 LTGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYD-IT----AACSGFLLGLVSAACH 190 (401)
Q Consensus 116 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~-i~----~~C~~~~~aL~~A~~~ 190 (401)
......++++++|+++|++++|||++++..... ..-..++++||++++....+ +. .++++...+|..+.+.
T Consensus 46 a~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~----~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~ 121 (148)
T d1u6ea2 46 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANS----RINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTT 121 (148)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCH----HHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcccccEEEeccccH----HHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHc
Confidence 345556889999999999999999999643221 24678999999976555544 32 3455556666655543
Q ss_pred HHcCCCCeEEEEE
Q 015758 191 IRGGGFRNVLVIG 203 (401)
Q Consensus 191 l~~g~~~~vLvv~ 203 (401)
=+-.+.+++|+++
T Consensus 122 g~i~~Gd~vll~g 134 (148)
T d1u6ea2 122 GAAKPGDLALLIG 134 (148)
T ss_dssp TSSCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 2222346787776
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.38 E-value=0.0027 Score=51.63 Aligned_cols=83 Identities=19% Similarity=0.156 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEeeC----ccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDIT----AACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i~----~~C~~~~~aL~~A~~~l~~ 193 (401)
....++++++|+++|++++|||+++...... .....++++||++++.....+. .+.++...+|..+..--+-
T Consensus 47 ~~vp~~i~~~L~~~g~~~~dId~~i~Hqa~~----~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~~ 122 (149)
T d1ub7a2 47 RVMNTATLEAIEKAGLTPEDIRLFVPHQANL----RIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGRI 122 (149)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCSCH----HHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHhhccccccccEEEeeccch----HHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCCC
Confidence 4456889999999999999999998643222 2467889999997554444442 3444444444444333122
Q ss_pred CCCCeEEEEEe
Q 015758 194 GGFRNVLVIGG 204 (401)
Q Consensus 194 g~~~~vLvv~~ 204 (401)
.+.+++|+++.
T Consensus 123 ~~Gd~vll~g~ 133 (149)
T d1ub7a2 123 REGDHVLLVSF 133 (149)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 34578888773
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=96.05 E-value=0.0061 Score=49.05 Aligned_cols=83 Identities=12% Similarity=0.043 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeEee----CccChHHHHHHHHHHHHHHc
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAYDI----TAACSGFLLGLVSAACHIRG 193 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~~i----~~~C~~~~~aL~~A~~~l~~ 193 (401)
....++++++|+++|++++|||+++...... .....++++||++.+.....+ +.++++...+|..+...=+-
T Consensus 44 ~~~~~~i~~~L~~~g~~~~dId~~i~Hq~~~----~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~~ 119 (143)
T d1hnja2 44 TELAHIVDETLAANNLDRSQLDWLVPHQANL----RIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRI 119 (143)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEECCSCH----HHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCS
T ss_pred hhhhHHHHHHHHHhhhcccccceEEeccCch----HHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhCCC
Confidence 4456799999999999999999998643221 246788999999754333333 24556666666655443111
Q ss_pred CCCCeEEEEEe
Q 015758 194 GGFRNVLVIGG 204 (401)
Q Consensus 194 g~~~~vLvv~~ 204 (401)
.+.+++|+++.
T Consensus 120 ~~Gd~vll~g~ 130 (143)
T d1hnja2 120 KPGQLVLLEAF 130 (143)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 24578888763
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=95.98 E-value=0.008 Score=48.80 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCHHHHHHH-----HHHcCCCchhhhhcccccCccccChHHHHHHHHHH---cC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQRIIDAV-----ANRLDVPMERVISNLANYGNTSAASIPLALDEAVR---SG 374 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~~i~~~i-----~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~---~g 374 (401)
..++++++|+.+ ++|||++..|..+..+.|.+ .+.++-..-.+......+||+-+|+-.+.|...+. ++
T Consensus 24 ~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~s~K~~~GH~~~asG~~~l~~~~~~l~~~ 100 (151)
T d2vbaa2 24 AVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHG 100 (151)
T ss_dssp HHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCCCcccccchhhccccccchhhhhhhHHHHHHHcC
Confidence 346777777655 46899999999998887754 45565322223345678999998887776655543 22
Q ss_pred CC------------------------CCCCEEEEEeeehhhhheeeEEE
Q 015758 375 KV------------------------KPGHTIAAAGFGAGLTWGSAILR 399 (401)
Q Consensus 375 ~~------------------------~~Gd~ill~~~G~G~s~~a~llr 399 (401)
.+ .+-+.++..+||.|.+.++++||
T Consensus 101 ~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~ 149 (151)
T d2vbaa2 101 FIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMR 149 (151)
T ss_dssp EECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEE
T ss_pred CcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEE
Confidence 10 12256788999999999999987
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=95.40 E-value=0.028 Score=45.53 Aligned_cols=83 Identities=20% Similarity=0.123 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeE-eeC-cc-ChHH--HHHHHHHHHHH
Q 015758 117 TGLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAY-DIT-AA-CSGF--LLGLVSAACHI 191 (401)
Q Consensus 117 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~-~i~-~~-C~~~--~~aL~~A~~~l 191 (401)
.....++++++|+++|++++|||++++..... .....++++||++.+.... .+. .| |++. ..+|..+.+.=
T Consensus 47 v~~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~----~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~~~~~~ 122 (153)
T d1mzja2 47 VADVVPAAREALEVAGLTVGDLVAFVPHQANL----RIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSG 122 (153)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEEECCSCH----HHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCcccCCEEEEcCCcH----HHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHHHHHcC
Confidence 45556788999999999999999999643221 1467889999997554322 232 23 3333 34444333321
Q ss_pred HcCCCCeEEEEE
Q 015758 192 RGGGFRNVLVIG 203 (401)
Q Consensus 192 ~~g~~~~vLvv~ 203 (401)
+-.+.+++|+++
T Consensus 123 ~~~~Gd~ill~~ 134 (153)
T d1mzja2 123 AVPGGGPALMIG 134 (153)
T ss_dssp SSCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 112357787776
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=94.55 E-value=0.035 Score=46.92 Aligned_cols=83 Identities=18% Similarity=0.197 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccCH----HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQANQ----RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~~----~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
..+...++++++|+++|++++|||.++...... ..--.+.++|+++++-.. + ...|++|++.+.+|+.+ +
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~--~-~i~~~gC~g~~~al~~A~~~l 151 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQ--I-PIAQLGCAAGGAAINRAHDFC 151 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEE--E-EECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeE--e-ccccchhhHHHHHHHHHHHHH
Confidence 345667899999999999999999999754332 233457788998764332 1 33467787777777655 3
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
+.+ +..++|+++.
T Consensus 152 ~~~---~~~~vLvv~~ 164 (200)
T d1u0ma1 152 TAY---PEANALIVAC 164 (200)
T ss_dssp HHS---TTCEEEEEEE
T ss_pred HhC---CCCEEEEEEE
Confidence 344 4467777764
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=92.45 E-value=0.13 Score=44.30 Aligned_cols=85 Identities=12% Similarity=-0.018 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCC
Q 015758 300 VRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGK 375 (401)
Q Consensus 300 ~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~ 375 (401)
.+...++++++|+++|++++|||++++.... ...--.+.+++++..+... -...|.+|+..+.+|..+..--+
T Consensus 103 ~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~---~~~~~~~C~g~~~al~~A~~~i~ 179 (235)
T d1bi5a1 103 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKR---YMMYQQGCFAGGTVLRLAKDLAE 179 (235)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEE---EEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceE---EeeecCccchHHHHHHHHHHHHH
Confidence 3456689999999999999999999985543 2233356667776543321 12346777777777765533212
Q ss_pred CCCCCEEEEEee
Q 015758 376 VKPGHTIAAAGF 387 (401)
Q Consensus 376 ~~~Gd~ill~~~ 387 (401)
-.+..++|+++.
T Consensus 180 ~~~~~~vLvV~~ 191 (235)
T d1bi5a1 180 NNKGARVLVVCS 191 (235)
T ss_dssp TSTTCEEEEEEE
T ss_pred cCCCCeEEEEEe
Confidence 235578888775
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.19 E-value=0.065 Score=49.51 Aligned_cols=83 Identities=19% Similarity=0.137 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEecccC----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---H
Q 015758 299 AVRVVPQTIESALEKAGLTMSSIDWLLLHQAN----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---V 371 (401)
Q Consensus 299 ~~~~~~~~i~~aL~~agl~~~dId~~i~Hq~~----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l 371 (401)
..+...++.+++|+++|++++|||++++.... +..--.+.++||++.+-... ...|++|++.+.+|..+ +
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~---~~~~~gC~g~~~aL~~A~~~l 168 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRV---VVNFMGCAAAMNALGTATNYV 168 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEE---EEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEe---eccccCccHHHHHHHHHHHHH
Confidence 44566789999999999999999999964321 22334688999998654332 22345677777777544 4
Q ss_pred HcCCCCCCCEEEEEee
Q 015758 372 RSGKVKPGHTIAAAGF 387 (401)
Q Consensus 372 ~~g~~~~Gd~ill~~~ 387 (401)
+.+ +..++|+++.
T Consensus 169 ~sg---~~~~~LVV~~ 181 (372)
T d1teda_ 169 RAH---PAMKALVVCI 181 (372)
T ss_dssp HHS---TTCEEEEEEE
T ss_pred hcC---CCccceeeee
Confidence 444 4567877754
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=90.21 E-value=0.29 Score=39.95 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccC-----HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHcC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQAN-----QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRSG 374 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~-----~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~g 374 (401)
..++.+++|+++|++++|||.+++...+ +..--.+.++||++.-. .+ ++ |.+|++...+|..+ +++|
T Consensus 55 a~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~---~~-di-~~~C~g~~~al~~A~~~i~sg 129 (174)
T d1hnja1 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP---AF-DV-AAACAGFTYALSVADQYVKSG 129 (174)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC---EE-EE-CCGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchh---hh-hh-hhhhccHHHHHHHHHHHHhcC
Confidence 3478889999999999999999876443 23445688889996322 22 23 45666666666554 3333
Q ss_pred CCCCCCEEEEEee
Q 015758 375 KVKPGHTIAAAGF 387 (401)
Q Consensus 375 ~~~~Gd~ill~~~ 387 (401)
..+++|+++.
T Consensus 130 ---~~~~~Lvv~~ 139 (174)
T d1hnja1 130 ---AVKYALVVGS 139 (174)
T ss_dssp ---SCSEEEEEEE
T ss_pred ---CcceeEEEee
Confidence 3457777763
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=88.34 E-value=0.28 Score=40.31 Aligned_cols=78 Identities=22% Similarity=0.264 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEecccCH-----HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHH---HHc
Q 015758 302 VVPQTIESALEKAGLTMSSIDWLLLHQANQ-----RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEA---VRS 373 (401)
Q Consensus 302 ~~~~~i~~aL~~agl~~~dId~~i~Hq~~~-----~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~---l~~ 373 (401)
...++.+++|+++|++++|||.++++..+. ..--.+.++++.+.-. .+ ++ |.+|++...+|..+ +++
T Consensus 61 ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~~---~~-Dv-~~~C~g~~~aL~~A~~~i~~ 135 (181)
T d1mzja1 61 MGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG---GF-DL-SAACAGFCHALSIAADAVES 135 (181)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE---EE-EE-ECGGGHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCcc---ce-eH-HhhhccHHHHHHHHhCHhhc
Confidence 344788899999999999999999765542 2233467778855321 12 33 45677777777655 333
Q ss_pred CCCCCCCEEEEEee
Q 015758 374 GKVKPGHTIAAAGF 387 (401)
Q Consensus 374 g~~~~Gd~ill~~~ 387 (401)
+ ...++|+++.
T Consensus 136 ~---~~~~~LvV~~ 146 (181)
T d1mzja1 136 G---GSRHVLVVAT 146 (181)
T ss_dssp S---SCSCEEEEEE
T ss_pred C---CCceeEEeee
Confidence 3 3456777663
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=88.26 E-value=0.12 Score=41.28 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCchHHHHHHHcCCCCCCeeE--e-e----CccChHHHHHHHHHH
Q 015758 118 GLAVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFGGATQIPKALGCKNNPLAY--D-I----TAACSGFLLGLVSAA 188 (401)
Q Consensus 118 ~la~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~~a~~i~~~lGl~~~~~~~--~-i----~~~C~~~~~aL~~A~ 188 (401)
.-...+.+++|+++|++++|||++++...... .-..++++||++++.... + + +.+.++-..+|..+.
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~----i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~ 116 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHAGGPR----ILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF 116 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEECSHHH----HHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECCCCHH----HHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHH
Confidence 44568899999999999999999886432111 356789999997544322 2 2 234555555554443
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=87.63 E-value=0.61 Score=37.77 Aligned_cols=79 Identities=13% Similarity=0.124 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEecccCH-----HHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcCCCC
Q 015758 303 VPQTIESALEKAGLTMSSIDWLLLHQANQ-----RIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSGKVK 377 (401)
Q Consensus 303 ~~~~i~~aL~~agl~~~dId~~i~Hq~~~-----~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g~~~ 377 (401)
..++.+++|+++|++++|||.+++..... ..--.+.++||.+.. .+ +. |.+|++.+.+|..+..=-+-.
T Consensus 53 a~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~~~----~~-di-~~~C~g~~~al~~a~~~~~~~ 126 (172)
T d1ub7a1 53 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKAF----AY-DL-LAGCPGWIYALAQAHALVEAG 126 (172)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCCE----EE-EE-ECSTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccCcc----ce-ee-hhccccHHHHHHHHhhhhhcC
Confidence 34778889999999999999999765443 334457788985431 12 12 235666666665442211112
Q ss_pred CCCEEEEEee
Q 015758 378 PGHTIAAAGF 387 (401)
Q Consensus 378 ~Gd~ill~~~ 387 (401)
...++|+++.
T Consensus 127 ~~~~~Lvv~~ 136 (172)
T d1ub7a1 127 LAQKVLAVGA 136 (172)
T ss_dssp SCSEEEEEEE
T ss_pred CcceeEEecc
Confidence 3467777664
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=86.40 E-value=1.7 Score=33.19 Aligned_cols=76 Identities=28% Similarity=0.224 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCC-chHHHHHHHcCCCCCC-----eeEee--CccChHHHHHHHHHHHHH
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDLF-GGATQIPKALGCKNNP-----LAYDI--TAACSGFLLGLVSAACHI 191 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~-~~a~~i~~~lGl~~~~-----~~~~i--~~~C~~~~~aL~~A~~~l 191 (401)
-+.|++++|+++|++.+|||++=.. .-| ..+-..+++||++.+. -++.+ -.||+|.-.-+.++..+-
T Consensus 24 Pv~A~~~lL~r~gl~~~Did~~Ein-----EAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~ 98 (124)
T d1m3ka2 24 PIPASRKALERAGWKIGDLDLVEAN-----EAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMK 98 (124)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC-----CSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCChhcccHHHhc-----ccchhheeeehHhhCCChhhcCCCCCccccccCcCccchhHHHHHHHHHH
Confidence 3689999999999999999998642 123 2345667888885321 12222 268999888888888887
Q ss_pred HcCCCCeEEE
Q 015758 192 RGGGFRNVLV 201 (401)
Q Consensus 192 ~~g~~~~vLv 201 (401)
+.+ .++.++
T Consensus 99 ~~~-~~~Gla 107 (124)
T d1m3ka2 99 RRG-ARKGLA 107 (124)
T ss_dssp HHT-CSEEEE
T ss_pred hcC-CCEEEE
Confidence 765 456554
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=81.35 E-value=5.8 Score=30.00 Aligned_cols=76 Identities=20% Similarity=0.170 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhCCCCcCCCCEEEEEecCCCCCCc-hHHHHHHH--cCCCCC-----CeeEeeC--ccChHHHHHHHHHHH
Q 015758 120 AVEAASRALQMAEVNPEDVDLVLMCTSTPEDLFG-GATQIPKA--LGCKNN-----PLAYDIT--AACSGFLLGLVSAAC 189 (401)
Q Consensus 120 a~~Aa~~aL~~agi~~~~Id~li~~t~~~~~~~~-~a~~i~~~--lGl~~~-----~~~~~i~--~~C~~~~~aL~~A~~ 189 (401)
-+.|++++|+++|++.+|||++=.. .-|. ..-...++ |+++.+ .-++.+. .||+|.-..+.+...
T Consensus 23 P~~A~~~~L~r~gl~~~Did~~Ein-----EAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlGHP~GASGari~~tl~~~ 97 (125)
T d1ulqa2 23 PVPATRKALERAGLSFSDLGLIELN-----EAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHE 97 (125)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEC-----CSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHhHhhccCcCccccchheec-----cccchhHHHHHHHhhccCchhhcCCCCCcccccCCccccchhHHHHHHHH
Confidence 4689999999999999999998642 2221 23334455 444311 1122222 477887777788887
Q ss_pred HHHcCCCCeEEE
Q 015758 190 HIRGGGFRNVLV 201 (401)
Q Consensus 190 ~l~~g~~~~vLv 201 (401)
+-+.+ .++.++
T Consensus 98 L~~~~-~~~G~a 108 (125)
T d1ulqa2 98 MRRRK-VQFGLA 108 (125)
T ss_dssp HHHTT-CSEEEE
T ss_pred HHhcC-CCEEEE
Confidence 77765 456554
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=81.22 E-value=1.6 Score=37.98 Aligned_cols=84 Identities=12% Similarity=0.232 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEecccC------HHHHHHHHHHcCCCchhhhhcccccCccccChHHHHHHHHHHcC
Q 015758 301 RVVPQTIESALEKAGLTMSSIDWLLLHQAN------QRIIDAVANRLDVPMERVISNLANYGNTSAASIPLALDEAVRSG 374 (401)
Q Consensus 301 ~~~~~~i~~aL~~agl~~~dId~~i~Hq~~------~~i~~~i~~~lgl~~e~~~~~l~~~Gn~~sasi~~~L~~~l~~g 374 (401)
+....+++++|+++|+++++||.+++-+.. ..+-+.+.-..|+|.+.--.++.+.=-+|..++..+. ..++.|
T Consensus 26 dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVn~~CaSg~~Ai~~a~-~~I~~G 104 (273)
T d1ulqa1 26 DLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAA-RAIWAG 104 (273)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHH-HHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccceEEEecccchHHHHHHHHH-HHHhcC
Confidence 345588999999999999999999876432 2466677777899864322455433333333333332 233443
Q ss_pred CCCCCCEEEEEeee
Q 015758 375 KVKPGHTIAAAGFG 388 (401)
Q Consensus 375 ~~~~Gd~ill~~~G 388 (401)
..|.++..|+-
T Consensus 105 ---~~d~~lagG~E 115 (273)
T d1ulqa1 105 ---EGKVYIGSGVE 115 (273)
T ss_dssp ---SCSEEEEEEEE
T ss_pred ---CCccceeeecc
Confidence 45777776653
|